The machine has been funded by the Ateliers de formation INSERM.
It is hosted and maintained by the Inserm Unit U1090 TAGC (Technological Advances for Genomics and Clinics) at Aix-Marseille Université.
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Ce serveur héberge le support didactique pour des formations en bioinformatique, et pour certains cours dispensés par le Département de Biologie de l'Université d'Aix-Marseille.
This server provides support material for training in bioinformatics, and for some courses taught by the Département de Biologie of Aix-Marseille Université.
| BI4U2 | Bioinformatique appliquée | L2 biologie | Emese Meglécz (Saint Charles), Jacques van Helden (Luminy) |
| BI5U25 | Biologie évolutive: théories, enjeux et applications | L3 biologie | Dominique Charmot, Patrice Crete, Philippe Kachidian, Christophe Robaglia, Jacques van Helden |
| ENSBBAU3 | Méthodes Bioinformatiques pour la génomique et la protéomique 1 ("bioinfo 1") | M1 BBSG | Jacques van Helden, Emmanuel Talla, Aitor González, Pedro Coutinho |
| SBBCU16L | Méthodes bioinformatiques pour la cis-régulation | M2 BBSG (option) | Jacques van Helden, Denis Puthier |
| ASG1 | Analyse statistique des données génomiques | M2 BBSG (option) | Jacques van Helden (Luminy), Denis Puthier |
| jgb53d-bd-prog | Analyse de données et programmation | Polytech Biotech 3A | Jacques van Helden, Denis Puthier, Arnaud Sergé, Nicolas Terrapon (2014-2015) |
| stats4bioinfo | Statistics for bioinformatics | Jacques van Helden | |
| SBBCU22L - AT2 | Atelier transcriptome 2 (AMU SBBCU22L - AT2) | M2 BBSG (option) | Denis Puthier, Lydie Pradel, Nicolas Fernandez |
| Polytech - TP Génomique | Polytech - TP de génomique | Polytech Biotech III | Denis Puthier, Lydie Pradel, Nicolas Fernandez. |
| Analyse Bioinformatique des données (ABD) | Analyse Bioinformatique des données | M2BBSG | Denis Puthier, Aitor Gonzalez |
| RSAT |
Regulatory Sequence Analysis Tools (RSAT), a software suite for the detection of cis-regulatory elements in genomic sequences. Developed by Jacques van Helden and co-workers. |
| NeAT |
Network Analysis tools (NeAT), a software suite for the analysis of biomolecular networks and metabolic pathways. Developed by Jacques van Helden and co-workers. |
| Galaxy |
A local instance of Galaxy.
Galaxy is an open, web-based platform for data intensive
biomedical research.
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| MICROME | EU FP7-funded project to reconstuct metabolism from bacterial genomes. The main server is hosted by the European Bioinformatics Institute. We maintain on this server the material for two events organized in Marseille. |
| ALLBIO training workshop |
Training material and practical information for the training workshop
Analysing thousands of bacterial genomes: annotation, metabolism, regulationorganized in Marseille, June 22-25, 2014, in the context of the EU-funded ALLBIO. |
The machine has been funded by the Ateliers de formation INSERM.
It is hosted and maintained by the Inserm Unit U1090 TAGC (Technological Advances for Genomics and Clinics) at Aix-Marseille Université.
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