; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_links.txt
; Input files
;	input	/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4/peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	71	70	210	0	2	11	0	253	6	283	282	4	86	69	60
c	78	69	25	0	0	0	282	5	271	3	1	43	76	81	78
g	56	70	36	0	0	260	0	18	0	0	2	22	65	65	62
t	81	77	15	286	284	15	4	10	9	0	1	217	59	71	86
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m1.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m1_rc.png
a	72	59	190	1	0	11	1	209	3	233	233	4	90	46
c	55	56	14	0	0	2	234	8	223	2	0	153	53	71
g	39	63	26	0	1	213	0	9	2	0	0	22	28	54
t	69	57	5	234	234	9	0	9	7	0	2	56	64	64
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m2.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m2_rc.png
a	62	57	19	194	1	5	23	0	176	9	201	195	25	70
c	40	46	26	4	0	1	5	210	12	190	4	1	64	58
g	69	41	101	10	2	9	33	0	15	2	0	8	32	39
t	39	66	64	2	207	195	149	0	7	9	5	6	89	43
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m3.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m3_rc.png
a	34	80	0	2	1	0	10	4	168	170	11	61
c	33	28	0	4	0	172	3	165	0	1	53	30
g	44	49	0	0	170	0	58	0	3	1	29	32
t	61	15	172	166	1	0	101	3	1	0	79	49
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m4.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m4_rc.png
a	42	81	1	1	15	0	4	23	151	164	16	51
c	45	32	2	2	2	165	3	50	13	2	42	45
g	38	43	0	0	150	1	162	2	4	2	28	33
t	46	15	168	168	4	5	2	96	3	3	85	42
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m5.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_7nt_mkv4//peak-motifs_oligos-2str-noov_7nt_mkv4_pssm_count_matrices_logo_m5_rc.png
; Host name	rsat-tagc
; Job started	2015-11-03.065632
; Job done	2015-11-03.065636
; Seconds	0.37
;	user	0.38
;	system	0.07
;	cuser	3.45
;	csystem	0.3
