; convert-matrix  -v 1 -i $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices.tf -from tf -to tab -return counts -return logo -logo_format png -logo_file $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo -o $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_links.txt
; Input files
;	input	/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices.tf
; Input format        	tf
; Output files
;	output	/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3/peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_links.txt
; Output format       	tab
; pseudo-weight       	1
a	41	31	23	122	1	1	5	0	129	4	148	147	5	40	31
c	30	35	21	8	0	0	0	150	2	143	1	1	18	42	45
g	46	29	89	13	0	0	137	0	15	0	0	1	9	36	36
t	33	55	17	7	149	149	8	0	4	3	1	1	118	32	38
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m1.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m1_rc.png
a	21	22	85	0	0	0	0	84	1	33	23
c	25	21	0	0	0	0	86	1	2	19	11
g	14	28	1	86	86	0	0	1	75	17	32
t	26	15	0	0	0	86	0	0	8	17	20
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m2.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m2_rc.png
a	20	21	2	60	0	5	6	0	0	21	38
c	8	17	1	2	1	2	1	65	2	18	18
g	20	12	54	4	1	0	59	0	62	3	5
t	19	17	10	1	65	60	1	2	3	25	6
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m3.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m3_rc.png
a	24	16	54	1	0	0	58	0	54	1	14	14
c	9	18	4	3	0	57	1	0	4	1	10	13
g	19	15	2	55	60	1	1	59	1	57	23	15
t	8	11	0	1	0	2	0	1	1	1	13	18
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m4.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m4_rc.png
a	9	4	30	0	0	0	0	30	1	13
c	7	4	0	0	0	0	30	0	9	0
g	9	5	0	30	0	0	0	0	6	5
t	5	17	0	0	30	30	0	0	14	12
//
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m5.png
; logo file:/workspace/rsat/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/oligos_6nt_mkv3//peak-motifs_oligos-2str-noov_6nt_mkv3_pssm_count_matrices_logo_m5_rc.png
; Host name	rsat-tagc
; Job started	2015-11-03.065614
; Job done	2015-11-03.065618
; Seconds	0.37
;	user	0.37
;	system	0.07
;	cuser	3.36
;	csystem	0.3
