RSAT - compare-matrices result

Analysis: result (03/11/2015 06:59)

Status: running...

Results will progressively be displayed on this page
This page should be automatically refreshed every 120 seconds until this message disappears.

Command: compare-matrices -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/discovered_motifs/oligos_6nt_mkv3_m4/peak-motifs_oligos_6nt_mkv3_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/jaspar_core_vertebrates_2015_03.tf -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/discovered_motifs/oligos_6nt_mkv3_m4/peak-motifs_oligos_6nt_mkv3_m4_vs_db_jaspar_core_vertebrates

Input files

Type	File
file1	peak-motifs_oligos_6nt_mkv3_m4.tf
file2	../../../../../../../../../motif_databases/JASPAR/jaspar_core_vertebrates_2015_03.tf

Output files

Type	File
match_table_txt	peak-motifs_oligos_6nt_mkv3_m4_vs_db_jaspar_core_vertebrates.tab
match_table_html	peak-motifs_oligos_6nt_mkv3_m4_vs_db_jaspar_core_vertebrates.html
alignments_1ton	peak-motifs_oligos_6nt_mkv3_m4_vs_db_jaspar_core_vertebrates_alignments_1ton.tab
alignments_1ton_html	peak-motifs_oligos_6nt_mkv3_m4_vs_db_jaspar_core_vertebrates_alignments_1ton.html

Directories

Type	Directory
output	.
aligned_logos	peak-motifs_oligos_6nt_mkv3_m4_vs_db_jaspar_core_vertebrates_aligned_logos