RSAT - compare-matrices result

Analysis: result (03/11/2015 06:57)

Status: running...


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Command: compare-matrices -v 1 -format transfac -file $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/discovered_motifs/peak-motifs_motifs_discovered.tf -distinct -mode matches -DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.75 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,logoDP,NIcor,NsEucl,SSD,NSW,match_rank,width,strand,offset,consensus,alignments_1ton -sort Ncor -o $RSAT/public_html/tmp/www-data/2015/11/03/peak-motifs.2015-11-03.065540_2015-11-03.065540_cr9ytx/results/discovered_motifs/peak-motifs_motifs_disco_compa.tab

Input files

TypeFile
file1peak-motifs_motifs_discovered.tf
file2peak-motifs_motifs_discovered.tf

Output files

TypeFile
match_table_txtpeak-motifs_motifs_disco_compa.tab
match_table_htmlpeak-motifs_motifs_disco_compa.html
alignments_1tonpeak-motifs_motifs_disco_compa_alignments_1ton.tab
alignments_1ton_htmlpeak-motifs_motifs_disco_compa_alignments_1ton.html

Directories

TypeDirectory
output.
aligned_logospeak-motifs_motifs_disco_compa_aligned_logos