The book associated to this course will be available in 2009.

**Statistics for Bioinformatics**

Jacques Van Helden

Publisher: Oxford University Press

ISBN13: 9780199226757

ISBN10: 019922675X

Hardback, 400 pages, Also available: paper

Aug 2009, Not Yet Published due Aug 15 2009

- pdf: one slide per page. Convenient for visualizing the slides on a computer screen
- 6spp: also pdf, but in handout format, 6 slides per page. convenient for printing

- Slides are grouped according to the general organization of introductory courses to statistics and probabilities.
- In contrast, the book is organized to treat subjects in a problem-driven way, as much as possible.

Slides (in english) |
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---|---|---|

Chapter |
Screen | Print (6spp) |

Content of the course |
6spp | |

Introduction |
6spp | |

Study cases - DNA chips |
6spp | |

Elements of probabilities |
6spp | |

Univariate analysis |
||

Descriptive statistics |
6spp | |

Statistical inference |
||

Theoretical distributions |
6spp | |

Sampling and estimation |
6spp | |

Fitting |
6spp | |

Hypothesis testing |
6spp | |

Conformity tests |
6spp | |

Homogeneity |
6spp | |

Significance |
6spp | |

Goodness of fit |
6spp | |

Multiple testing corrections |
6spp | |

Multivariate analysis |
||

Introduction to multivariate analysis |
6spp | |

Study cases |
6spp | |

Normalization of microarray data |
6spp | |

Correlation analysis |
6spp | |

Regression analysis |
||

Similarity and dissimilarity metrics |
6spp | |

Clustering |
6spp | |

Visualization |
6spp | |

Principal component analysis |
||

Multidimensional scaling |
||

Discriminant analysis |
6spp | |

Summary |
6spp | |

Analysis of microarray data |
||

Exercises |
||

Solutions to the exercises |