AC  LexA.RegulonDB2012
XX
ID  LexA.RegulonDB2012
XX
DE  waCTGtatawAwahmCAGya
P0       A     C     G     T
1       16     6     1    17
2       26     4     7     3
3        1    39     0     0
4        2     1     0    37
5        0     1    39     0
6        6     3     8    23
7       30     5     0     5
8        1     3     5    31
9       31     1     6     2
10      16     4     6    14
11      33     0     2     5
12      18     7     1    14
13      25     1     5     9
14      16     9     3    12
15      23    16     1     0
16       1    38     1     0
17      37     1     0     2
18       4     0    35     1
19       2    12     7    19
20      21     4     7     8
XX
BA  40 sequences
XX
BS  GACTGTATAAAACCACAGCC; site_0; 1; 20; 0; p
BS  TCCTCTCTGCAATACGCAGA; site_1; 1; 20; 0; p
BS  AGCTGAATAAATATACAGCA; site_2; 1; 20; 0; p
BS  CACTGTATACTTTACCAGTG; site_3; 1; 20; 0; p
BS  ACCAGAATATACATAATAGT; site_4; 1; 20; 0; p
BS  CACTGTATAAATAAACAGCT; site_5; 1; 20; 0; p
BS  AACTGATTAAAAACCCAGCG; site_6; 1; 20; 0; p
BS  AACTGTCGATAAGCGCAGCC; site_7; 1; 20; 0; p
BS  CGCTGCCCTGAAAGCCAGGC; site_8; 1; 20; 0; p
BS  TACTGGATAAAAAAACAGTT; site_9; 1; 20; 0; p
BS  TACTGTATAAACAGCCAATA; site_10; 1; 20; 0; p
BS  TGCTGTATGGATTAACAGGA; site_11; 1; 20; 0; p
BS  TACTGTATGGATGTACAGTA; site_12; 1; 20; 0; p
BS  ACCTGTATAAATAACCAGTA; site_13; 1; 20; 0; p
BS  ATCTGCTGGCAAGAACAGAC; site_14; 1; 20; 0; p
BS  TACTGTATATAAAAACAGTA; site_15; 1; 20; 0; p
BS  CACTGTATAAAAATCCTATA; site_16; 1; 20; 0; p
BS  AACTGTCGATACGTACAGTA; site_17; 1; 20; 0; p
BS  CACTGGATAGATAACCAGCA; site_18; 1; 20; 0; p
BS  TACTGTATAAAATCACAGTT; site_19; 1; 20; 0; p
BS  TGCTGGATAGATATCCAGCG; site_20; 1; 20; 0; p
BS  AACTGAAAAATGGCACAGTA; site_21; 1; 20; 0; p
BS  TACCGGATCGTTTCACAGTA; site_22; 1; 20; 0; p
BS  TACTGTATATAAAAACAGTA; site_23; 1; 20; 0; p
BS  AACTGGATAAAATTACAGGG; site_24; 1; 20; 0; p
BS  TACTGTATATAAAACCAGTT; site_25; 1; 20; 0; p
BS  TACTGTACACAATAACAGTA; site_26; 1; 20; 0; p
BS  TACTGTATGAGCATACAGTA; site_27; 1; 20; 0; p
BS  CTATGTTTATATAACCATCA; site_28; 1; 20; 0; p
BS  AGCTGGCGTTGATGCCAGCG; site_29; 1; 20; 0; p
BS  AACTGGATAATCATACAGTA; site_30; 1; 20; 0; p
BS  TGCAGGTTATAAAACCAGCA; site_31; 1; 20; 0; p
BS  AACTGTATATAAATACAGTT; site_32; 1; 20; 0; p
BS  TACTGTATAAATAAACAGTA; site_33; 1; 20; 0; p
BS  ATCTGTATATATACCCAGCT; site_34; 1; 20; 0; p
BS  AACTGCACAATAAACCAGAG; site_35; 1; 20; 0; p
BS  TGCTGTATATACTCACAGCA; site_36; 1; 20; 0; p
BS  AACTGTATATACACCCAGGG; site_37; 1; 20; 0; p
BS  ACCTGAATGAATATACAGTA; site_38; 1; 20; 0; p
BS  TACTGATGATATATACAGGT; site_39; 1; 20; 0; p
CC  program: consensus
CC  id: LexA.1nt_upstream-noorf-ovlp-2str.20.cons1
CC  matrix.nb: 1
CC  command: consensus -a /state/partition1/space14/PGC/RegulonDB/local/data/Matrices/data/bg_freqs/1nt_upstream-noorf_Escherichia_coli_K12-ovlp-2str.cons_bg -L 20 -d -pt 0 -pf 1 -c2
CC  sites: 40
CC  cons.unadjusted.information: 11.7602
CC  cons.adjusted.information: 10.9922
CC  cons.ln.Pval: -367.453
CC  cons.Pval: 2.6136E-160
CC  cons.ln.exp: -244.504
CC  cons.exp: 6.50303E-107
CC  matrix.nb: 1
CC  sites: 40
CC  consensus.strict: taCTGtataaAaaaaCAGta
CC  consensus.strict.rc: TACTGTTTTTTTATACAGTA
CC  consensus.IUPAC: waCTGtatawAwahmCAGya
CC  consensus.IUPAC.rc: TRCTGKDTWTWTATACAGTW
CC  consensus.regexp: [at]aCTGtata[at]A[at]a[act][ac]CAG[ct]a
CC  consensus.regexp.rc: T[AG]CTG[GT][AGT]T[AT]T[AT]TATACAGT[AT]
XX
//
AC  CRP.RegulonDB2012
XX
ID  CRP.RegulonDB2012
XX
DE  wtGtGatcyrsaTCACahwttt
P0       A     C     G     T
1      110    43    27    80
2       37    39    23   161
3       37    16   146    61
4       26    48    18   168
5       34     5   195    26
6      192    32    18    18
7       63    47    45   105
8       67    83    41    69
9       52    71    47    90
10     112    32    57    59
11      50    77    79    54
12     129    37    41    53
13      18    15    15   212
14      25   221    12     2
15     231     2    15    12
16      22   224     6     8
17     190    13    41    16
18      86    60    20    94
19      90    19     0   151
20      71    22    20   147
21      51    34    16   159
22      57    41    50   112
XX
BA  260 sequences
XX
BS  ATGTGATTCATATCACATATTT; site_0; 1; 22; 0; p
BS  CTGTGATTGGTATCACATTTTT; site_1; 1; 22; 0; p
BS  ATGTGATCCAGATCACATCTAT; site_2; 1; 22; 0; p
BS  ATCTGACTCACATCACACTTTT; site_3; 1; 22; 0; p
BS  ATGTTATCCACATCACAATTTC; site_4; 1; 22; 0; p
BS  ATTTGATACCCATCACACTTTC; site_5; 1; 22; 0; p
BS  ATGTGATTTTCATCACGATTTA; site_6; 1; 22; 0; p
BS  ATGTGATTAACAGCACATTTTT; site_7; 1; 22; 0; p
BS  ATGTGAGTAGTGTCACATTTTT; site_8; 1; 22; 0; p
BS  ATGTGATTTGCTTCACATCTTT; site_9; 1; 22; 0; p
BS  GTGTGAAGTTGATCACAAATTT; site_10; 1; 22; 0; p
BS  ATGTGATACAAATCACATAAAT; site_11; 1; 22; 0; p
BS  GTGTGATCGTCATCACAATTCG; site_12; 1; 22; 0; p
BS  ATGAGATTTTCATCACACATTT; site_13; 1; 22; 0; p
BS  AAGTGATTTAGATCACATAATA; site_14; 1; 22; 0; p
BS  GTGTGATCTGCATCACGCATTA; site_15; 1; 22; 0; p
BS  ATGTGTACGAAATCACATTTTT; site_16; 1; 22; 0; p
BS  TTTTGACATGTATCACAAATTT; site_17; 1; 22; 0; p
BS  TTGTGATTCAGATCACAAAGAT; site_18; 1; 22; 0; p
BS  ACGTGATCTTCATCACAAATAA; site_19; 1; 22; 0; p
BS  TCGTGATCAAGATCACATTCTC; site_20; 1; 22; 0; p
BS  ACGTGATGATGTTCACAATTTG; site_21; 1; 22; 0; p
BS  ATTTGAAGTAGCTCACACTTAT; site_22; 1; 22; 0; p
BS  ATTTGATTTAGATCGCAATTTG; site_23; 1; 22; 0; p
BS  TTGTGATTCGATTCACATTTAA; site_24; 1; 22; 0; p
BS  ATGTGATTGATATCACACAAAA; site_25; 1; 22; 0; p
BS  ATGCGATTCCACTCACAATATT; site_26; 1; 22; 0; p
BS  AAGTGACCGAAATCACACTTAA; site_27; 1; 22; 0; p
BS  ATGAGATTCAGATCACATATAA; site_28; 1; 22; 0; p
BS  GAGTGACGTAGATCACACTTAT; site_29; 1; 22; 0; p
BS  CTTCGATACACATCACAATTAA; site_30; 1; 22; 0; p
BS  ATTTGAAGTTCATCACACTTCA; site_31; 1; 22; 0; p
BS  CGGTGATCTATTTCACAAATTA; site_32; 1; 22; 0; p
BS  ATGCGATCTATATCACGCTGTG; site_33; 1; 22; 0; p
BS  ATTTGTTCCTCTTCACATTTTT; site_34; 1; 22; 0; p
BS  ATTTGCACGGCGTCACACTTTG; site_35; 1; 22; 0; p
BS  ATGTGAAATAAATCAAAATTTC; site_36; 1; 22; 0; p
BS  TAGTGATCCACGCCACATTTTG; site_37; 1; 22; 0; p
BS  TTGCGATCAAAATAACACTTTT; site_38; 1; 22; 0; p
BS  TTGTGAATCTTTTCACAGTTTA; site_39; 1; 22; 0; p
BS  ATTCAATATTCATCACACTTTT; site_40; 1; 22; 0; p
BS  AAGTGATGCAAATCACATAAAT; site_41; 1; 22; 0; p
BS  TCGTGAACTACGGCACACTTTG; site_42; 1; 22; 0; p
BS  TTATGACCCTCTTCACATTTCG; site_43; 1; 22; 0; p
BS  GTGTGATGCAAGCCACATTTTT; site_44; 1; 22; 0; p
BS  ATGTGAGCGAGATCAAATTCTA; site_45; 1; 22; 0; p
BS  ACGTGACGTTCATCACAAAACG; site_46; 1; 22; 0; p
BS  ATGTGAATTGCCGCACACATTA; site_47; 1; 22; 0; p
BS  ATGTGAGTTAGCTCACTCATTA; site_48; 1; 22; 0; p
BS  AGGTGAGATGCATCACGCTTCG; site_49; 1; 22; 0; p
BS  AGGTGACCGGTTTCACAAATAT; site_50; 1; 22; 0; p
BS  CTGTGAGTGATTTCACAGTATC; site_51; 1; 22; 0; p
BS  TTGTTATTAGTCTCACACTTTT; site_52; 1; 22; 0; p
BS  GTGCGAGCCAGCTCAAACTTTT; site_53; 1; 22; 0; p
BS  ATATGACGGCGGTCACACTTAT; site_54; 1; 22; 0; p
BS  ATGCGATCTGGTTCAAATAATT; site_55; 1; 22; 0; p
BS  TTTCGAGGTTGATCACATTTCC; site_56; 1; 22; 0; p
BS  ATGTGCGACCACTCACAAATTA; site_57; 1; 22; 0; p
BS  AGGTGAGAGCCATCACAAATGT; site_58; 1; 22; 0; p
BS  ATGTGAGCCAGCTCACCATAAA; site_59; 1; 22; 0; p
BS  ATGAGATCGAGCACACATTTTA; site_60; 1; 22; 0; p
BS  ATGTGAAGCAAATCACCCACTT; site_61; 1; 22; 0; p
BS  ATTTGAGTAAGTTCTCAATTTT; site_62; 1; 22; 0; p
BS  TTGTGAGCTTGCTCGCACTTCG; site_63; 1; 22; 0; p
BS  TTATGACGCTCTTCACACTCTG; site_64; 1; 22; 0; p
BS  ATGCGCGACGCATCGCAAATTT; site_65; 1; 22; 0; p
BS  ATATGACAACCATCACAAAAAT; site_66; 1; 22; 0; p
BS  CTGTAACAGAGATCACACAAAG; site_67; 1; 22; 0; p
BS  TAGTGAAGCAGATCGCATTATA; site_68; 1; 22; 0; p
BS  TATTGTCCCCGATCACACTTTT; site_69; 1; 22; 0; p
BS  CCATGATCCGCGCCACACTTTT; site_70; 1; 22; 0; p
BS  CAGTGATCCAGGTCACGATAAC; site_71; 1; 22; 0; p
BS  GTTAAATATAGATCACAATTTT; site_72; 1; 22; 0; p
BS  TATAGATCTCCGTCACATTTTT; site_73; 1; 22; 0; p
BS  ATGTGACTACCATCACTTTAAT; site_74; 1; 22; 0; p
BS  TTGCGAAGCGCGTCACTATTTA; site_75; 1; 22; 0; p
BS  ATATGACGGTGTTCACAAAGTT; site_76; 1; 22; 0; p
BS  ATTTGCACTGTGTCACAATTCC; site_77; 1; 22; 0; p
BS  TTGTGATCGTTATCTCGATATT; site_78; 1; 22; 0; p
BS  TTGCAAGCAACATCACGAAATT; site_79; 1; 22; 0; p
BS  GTGTTAAATTGATCACGTTTTA; site_80; 1; 22; 0; p
BS  TTGCGAGCGAGCGCACACTTGT; site_81; 1; 22; 0; p
BS  ATTTATTCCATGTCACACTTTT; site_82; 1; 22; 0; p
BS  TAGAGATCTACTTCACAAATCA; site_83; 1; 22; 0; p
BS  TTTTGCGCGAGGTCACTATTTT; site_84; 1; 22; 0; p
BS  TTGCGGGTCGCGTCACATTTAA; site_85; 1; 22; 0; p
BS  AGGTGATTTTGATCACGGAATA; site_86; 1; 22; 0; p
BS  TTTTGAATCCCATCACAAACCC; site_87; 1; 22; 0; p
BS  CTGTGGTTGCCATCACAGATAT; site_88; 1; 22; 0; p
BS  TTGTGGCCTGCTTCAAACTTTC; site_89; 1; 22; 0; p
BS  AAGTGAACCATATCTCAATTCA; site_90; 1; 22; 0; p
BS  TTATGAAGCCCTTCACAGAATT; site_91; 1; 22; 0; p
BS  GTGCGGGCGTGATCACAATTAC; site_92; 1; 22; 0; p
BS  CTGTGACTCGATTCACGAAGTC; site_93; 1; 22; 0; p
BS  ACGCGACTTTTATCACTTTTTA; site_94; 1; 22; 0; p
BS  CGGTGACGGAGTTCACCCTTTA; site_95; 1; 22; 0; p
BS  TTGCAATTCGTGTCACAAAATA; site_96; 1; 22; 0; p
BS  TTACGACAGCTATCACGAATTT; site_97; 1; 22; 0; p
BS  ATTTGAAGCAGTTAACGCTATT; site_98; 1; 22; 0; p
BS  ACATGAGCAACCGCACATATTT; site_99; 1; 22; 0; p
BS  CTGCGAGTGGGAGCACGGTTTT; site_100; 1; 22; 0; p
BS  TTTTGCGCTAAAGCACATTTCT; site_101; 1; 22; 0; p
BS  GTGCGAAATCCGTCACAGTTCA; site_102; 1; 22; 0; p
BS  TTGTGATGTGGTTAACCAATTT; site_103; 1; 22; 0; p
BS  TCGTGAACGATCCCACGAATTT; site_104; 1; 22; 0; p
BS  CTGCGAGCATGGTCATATTTTT; site_105; 1; 22; 0; p
BS  GAGTGATATGTATAACATTATG; site_106; 1; 22; 0; p
BS  ATATGACCAACCTCTCATAATT; site_107; 1; 22; 0; p
BS  ATGCAAAGGACGTCACATTACC; site_108; 1; 22; 0; p
BS  GAGTGATCGAGTTAACATTGTT; site_109; 1; 22; 0; p
BS  TGGTGAGGAACTTAACAATATT; site_110; 1; 22; 0; p
BS  TTGAGATTCAACTCTCAAATTT; site_111; 1; 22; 0; p
BS  TTGTGAATCAGATCAGAAAACC; site_112; 1; 22; 0; p
BS  ATGTATGACAGATCACTATTTT; site_113; 1; 22; 0; p
BS  ATATGATAAATATCAAACAATG; site_114; 1; 22; 0; p
BS  ATGTAAGCTGTGCCACGTTTTT; site_115; 1; 22; 0; p
BS  TTGTGAGTTTTGTCACCAAATA; site_116; 1; 22; 0; p
BS  TTGCGATGAATGTCACATCCTC; site_117; 1; 22; 0; p
BS  TTATGACGAGGCACACACATTT; site_118; 1; 22; 0; p
BS  TTGAGGGGTTGATCACGTTTTG; site_119; 1; 22; 0; p
BS  TGTTGCTTTTGATCACAATAAG; site_120; 1; 22; 0; p
BS  TCGTGACAGGAATCACGGAGTT; site_121; 1; 22; 0; p
BS  GCTTGAGCCGCAGCACAATGTG; site_122; 1; 22; 0; p
BS  GTTTGACGGCTATCACGTTTCA; site_123; 1; 22; 0; p
BS  ATTTAATTCGTATCGCAAATTA; site_124; 1; 22; 0; p
BS  TGGTGATCCATAAAACAATATT; site_125; 1; 22; 0; p
BS  CCGTGAAAGCGATCACAAAGGG; site_126; 1; 22; 0; p
BS  TCGTGATACTCATCACCATGAC; site_127; 1; 22; 0; p
BS  ATGTGATCTACAGCATGTTATG; site_128; 1; 22; 0; p
BS  GCGTGCCAGTTTTCACATTCTT; site_129; 1; 22; 0; p
BS  TCTTGCTTACCGTCACATTCTT; site_130; 1; 22; 0; p
BS  CAGTGACAGATTTCACGAAAAT; site_131; 1; 22; 0; p
BS  GGTTGCACTCTCTCACATTTTT; site_132; 1; 22; 0; p
BS  GCCTGACGGAGTTCACACTTGT; site_133; 1; 22; 0; p
BS  TCATGAAACTGTGCACATTTTA; site_134; 1; 22; 0; p
BS  GCAGGATTTAGCTCACACTTAT; site_135; 1; 22; 0; p
BS  ACGCAGCGAAGATCACAATTTA; site_136; 1; 22; 0; p
BS  CATTTAAACAGATCACAAAATC; site_137; 1; 22; 0; p
BS  TATTGATCTAACTCACGAAAAT; site_138; 1; 22; 0; p
BS  TTACAAGGCACATCACGTTATG; site_139; 1; 22; 0; p
BS  CTGTGACCGTGGTCGCAGTTGG; site_140; 1; 22; 0; p
BS  TTGGAATATCCATCACATAACG; site_141; 1; 22; 0; p
BS  ATATGCGCGAAATCAAACAATT; site_142; 1; 22; 0; p
BS  GTGCGAGTCTGCTCGCATAATC; site_143; 1; 22; 0; p
BS  ATGTGACAGATAAAACGTTTTA; site_144; 1; 22; 0; p
BS  AATTGACCGATGCCACGTTTTG; site_145; 1; 22; 0; p
BS  ATATGTTTCGTTTCACAGTTCT; site_146; 1; 22; 0; p
BS  ATGTGCGCATCTCCACATTACC; site_147; 1; 22; 0; p
BS  ATGTTAATTTCCTCACATCGTG; site_148; 1; 22; 0; p
BS  ATGCGGTGAGCATCACATCACC; site_149; 1; 22; 0; p
BS  ACGAGATCTGACACACACTATA; site_150; 1; 22; 0; p
BS  CAGCGACATCTGTCACATTCCT; site_151; 1; 22; 0; p
BS  TTGGGCGACAGATCACGCAAAA; site_152; 1; 22; 0; p
BS  TTTTGAATCGTGTCTCATTCTG; site_153; 1; 22; 0; p
BS  GTGAGGCATAAATCACATTACG; site_154; 1; 22; 0; p
BS  TCGTGATATTGCTCACGCCAAA; site_155; 1; 22; 0; p
BS  TTCTAATAGCCATCACAAAACG; site_156; 1; 22; 0; p
BS  TTGTGGATAAAATCACGGTCTG; site_157; 1; 22; 0; p
BS  CTCTGAGATGGATCAAAGAATT; site_158; 1; 22; 0; p
BS  CTTAGAAACCGATCACATACAG; site_159; 1; 22; 0; p
BS  AATCGATTGCGTTCACGTTTAC; site_160; 1; 22; 0; p
BS  TATTGATTTAAATCAAAGATTC; site_161; 1; 22; 0; p
BS  AATTGAACCAAATCATAAAATC; site_162; 1; 22; 0; p
BS  ATTGAACCCCGATCACACCATA; site_163; 1; 22; 0; p
BS  TAATGAAAAGGATGACATATTC; site_164; 1; 22; 0; p
BS  ACTTGCGTGACTACACATTCTT; site_165; 1; 22; 0; p
BS  AGCAGATACAACTCACACAATG; site_166; 1; 22; 0; p
BS  CTGTGCTGCGCATAATACTTTG; site_167; 1; 22; 0; p
BS  CCATGCTCAATCTCACAAAGTG; site_168; 1; 22; 0; p
BS  ATTCGACAAAGCGCACAATCCG; site_169; 1; 22; 0; p
BS  ACAGGAAGCACATCACAAAGAC; site_170; 1; 22; 0; p
BS  ATTTGCCACAGGTAACAAAAAA; site_171; 1; 22; 0; p
BS  TACGGATCTTCATCACATAAAA; site_172; 1; 22; 0; p
BS  CTGTGACAAGCTCCGCAAATCG; site_173; 1; 22; 0; p
BS  CAACGCTTTGGCTCACAGTTTA; site_174; 1; 22; 0; p
BS  ACAAAACATATGTCACAATATT; site_175; 1; 22; 0; p
BS  ATATGATCTATATCAATTTCTC; site_176; 1; 22; 0; p
BS  CTGTTGATATGATCACGTTATA; site_177; 1; 22; 0; p
BS  TTTAGATGTAAATCACTCCATT; site_178; 1; 22; 0; p
BS  ATGTGAAATAAAACAATTATTT; site_179; 1; 22; 0; p
BS  ACCTGTCACAAATCACAAAAAG; site_180; 1; 22; 0; p
BS  TAGTGCTCAGCGACACTATTTT; site_181; 1; 22; 0; p
BS  TTCTTATCTACCTCACAAAGGT; site_182; 1; 22; 0; p
BS  CTGTGCGCGCAACGACATTTTG; site_183; 1; 22; 0; p
BS  TTACAAAATTGTTAACAATTTT; site_184; 1; 22; 0; p
BS  ATTTTAACAACTTGACATATAT; site_185; 1; 22; 0; p
BS  CTTCGTAACGCCTCGCAAATTT; site_186; 1; 22; 0; p
BS  AACCTCTTTGCGTCACATTTTT; site_187; 1; 22; 0; p
BS  TTTTGTAACAATTCAAACTTCT; site_188; 1; 22; 0; p
BS  TCAGGCGTTAAATCACGTTTTC; site_189; 1; 22; 0; p
BS  TTCATCTCTATGTCACATTTTG; site_190; 1; 22; 0; p
BS  TTGTTACCTGCCTCTAACTTTG; site_191; 1; 22; 0; p
BS  ATGTGATATTGCTCTCCTATGG; site_192; 1; 22; 0; p
BS  ACGTTAACTGAAACGCATATTT; site_193; 1; 22; 0; p
BS  TATTGATGTAAATCAAATTCAC; site_194; 1; 22; 0; p
BS  CCATGAAACGGAACACGAAAAT; site_195; 1; 22; 0; p
BS  ATAATAATCTAATCACATCTTG; site_196; 1; 22; 0; p
BS  TGGTGCGCATGATAACGCCTTT; site_197; 1; 22; 0; p
BS  GTGCAGGCTTGATCACAACTCC; site_198; 1; 22; 0; p
BS  AGGTAATTCGAATGACATTGCT; site_199; 1; 22; 0; p
BS  CTGGGATGAAAGTGACATTTGA; site_200; 1; 22; 0; p
BS  CCGACGAATAGATCACAATTTA; site_201; 1; 22; 0; p
BS  ATTAGTAAGTTATCACCATTTG; site_202; 1; 22; 0; p
BS  CTGTGATAGTGTCATCATTTTC; site_203; 1; 22; 0; p
BS  GCTTAATTTAAATAACAAAATC; site_204; 1; 22; 0; p
BS  ATGTGATGAGAAAGTCAATTTG; site_205; 1; 22; 0; p
BS  TGACGCATGAAATCACGTTTCA; site_206; 1; 22; 0; p
BS  ATGCAAAATCAAAAACAATTTC; site_207; 1; 22; 0; p
BS  AATCGATTTAACACACCATTTA; site_208; 1; 22; 0; p
BS  TTGTAAACAGATTAACACCTCG; site_209; 1; 22; 0; p
BS  CAGTTATTTTTAACAAATTTTT; site_210; 1; 22; 0; p
BS  TGTTGCTGACCTTCAAAAATTA; site_211; 1; 22; 0; p
BS  TTGTCATCTTTCTGACACCTTA; site_212; 1; 22; 0; p
BS  AAGTTCGATATTTCTCGTTTTT; site_213; 1; 22; 0; p
BS  CTGGAACGCTTTTCGCATTCTG; site_214; 1; 22; 0; p
BS  ACCCGCTTTAAAACACGCTATC; site_215; 1; 22; 0; p
BS  GTTTGACATTGTTCTCTCACTT; site_216; 1; 22; 0; p
BS  CCTCGGTTTAGTTCACAGAAGC; site_217; 1; 22; 0; p
BS  TAGTTACATGTTTAACACTTGA; site_218; 1; 22; 0; p
BS  ATCTGGGTAGCATCACAGCAGA; site_219; 1; 22; 0; p
BS  AGGCGACCTGGGTCATGCTGAA; site_220; 1; 22; 0; p
BS  ATCTTGAAATAATCACATTGAT; site_221; 1; 22; 0; p
BS  ATTGTTATCCGCTCACAATTCC; site_222; 1; 22; 0; p
BS  TGTGGAAATTAATCCCACTATT; site_223; 1; 22; 0; p
BS  CTGCATATTAATTGACATTTCT; site_224; 1; 22; 0; p
BS  CGGGTATTAGCACCACATATAA; site_225; 1; 22; 0; p
BS  ATGTAATAAAATTCATGGTAAT; site_226; 1; 22; 0; p
BS  TTTTACTTTTGGTTACATATTT; site_227; 1; 22; 0; p
BS  TCTTTATCTTTGTAGCACTTTC; site_228; 1; 22; 0; p
BS  ACGCGCACTATGTCAACTCTTG; site_229; 1; 22; 0; p
BS  CAATGAAAAATTGCACAGTAAA; site_230; 1; 22; 0; p
BS  GTTAAATTGATGTAACATAATC; site_231; 1; 22; 0; p
BS  TTGAGTCATAAATAACCTTTAG; site_232; 1; 22; 0; p
BS  AGGTGAATCGCGCCAGCAAATT; site_233; 1; 22; 0; p
BS  CTGAGACTAGTACGACTTTTTG; site_234; 1; 22; 0; p
BS  AGTTGTAACTATGCACAAATGT; site_235; 1; 22; 0; p
BS  CCCCATGGCAGATGACATTTTT; site_236; 1; 22; 0; p
BS  AAAATATCCTTGTCACATTCGT; site_237; 1; 22; 0; p
BS  ATGTAAATTGGTCAACCATTGT; site_238; 1; 22; 0; p
BS  ACACTATGAGCAAAACACATTT; site_239; 1; 22; 0; p
BS  ATTTAATCATGTTTACAGTAAT; site_240; 1; 22; 0; p
BS  CTGGGAGCAGGCTCGATTTATG; site_241; 1; 22; 0; p
BS  ACATGATAAATTTGACGAAGAA; site_242; 1; 22; 0; p
BS  CAGTGAACCCCTTCCCAACCAC; site_243; 1; 22; 0; p
BS  GAATGCTAATCATCAGAAATGT; site_244; 1; 22; 0; p
BS  TTTGGGTTGTTATCAAATCGTT; site_245; 1; 22; 0; p
BS  TGTAAATCTGCATCGGAATTTG; site_246; 1; 22; 0; p
BS  TTCATACCACCATCACAACCAC; site_247; 1; 22; 0; p
BS  TATTTAACGCCGTCAGAAATGT; site_248; 1; 22; 0; p
BS  AAGGTGACTATACCACACTCAT; site_249; 1; 22; 0; p
BS  TTAGCAAATACCTCACAGTGAA; site_250; 1; 22; 0; p
BS  CTGCAACCATCTACAAATAACC; site_251; 1; 22; 0; p
BS  CGGGTAATAACAACACTCATAT; site_252; 1; 22; 0; p
BS  TTTCCTGAAAATTCACGCTGTA; site_253; 1; 22; 0; p
BS  ATTTAATGAAGAGAATTTTTTT; site_254; 1; 22; 0; p
BS  CTGCGTGAAGCAGCAGTAAATC; site_255; 1; 22; 0; p
BS  ACAGGCACCTGATAAAGCCATT; site_256; 1; 22; 0; p
BS  GGCAAGTGGTATTCGCACTTTT; site_257; 1; 22; 0; p
BS  GTACGTTTGCAGTGAAATAACT; site_258; 1; 22; 0; p
BS  ATAACAAAATCCTAATGTTATT; site_259; 1; 22; 0; p
CC  program: meme
CC  matrix.nb: 1
CC  id: CRP.2nt_upstream-noorf-ovlp-2str.22.meme_m1
CC  id: CRP.2nt_upstream-noorf-ovlp-2str.22.meme_m1
CC  ac: 
CC  name: CRP.2nt_upstream-noorf-ovlp-2str.22.meme_m1
CC  command: meme data/Sites_FNA_NR//CRP.21.fna -dna -mod oops -revcomp -text -nostatus -minw 22 -maxw 22 -bfile /state/partition1/space14/PGC/RegulonDB/local/data/Matrices/data/bg_freqs/2nt_upstream-noorf_Escherichia_coli_K12-ovlp-2str.meme_bg
CC  sites: 260
CC  meme.llr: 1864
CC  meme.E-value: 3.9e-382
CC  matrix.nb: 1
CC  sites: 260
CC  consensus.strict: atGtGatccagaTCACattttt
CC  consensus.strict.rc: AAAAATGTGATCTGGATCACAT
CC  consensus.IUPAC: wtGtGatcyrsaTCACahwttt
CC  consensus.IUPAC.rc: AAAWDTGTGATSYRGATCACAW
CC  consensus.regexp: [at]tGtGatc[ct][ag][cg]aTCACa[act][at]ttt
CC  consensus.regexp.rc: AAA[AT][AGT]TGTGAT[CG][CT][AG]GATCACA[AT]
XX
//
