Regulatory Sequence Analysis Tools


Welcome to Regulatory Sequence Analysis Tools (RSAT).

RSAT
This web site provides a series of modular computer programs specifically designed for the detection of regulatory signals in non-coding sequences.

RSAT servers have been up and running since 1997. The project was initiated by Jacques van Helden, and is now pursued by the RSAT team.


Choose a server

January 2015: we are in the process of re-organising our mirror servers into taxon-specific servers, to better suit the drastic increase of available genomes.
fungi
maintained by TAGC - Université Aix Marseilles, France
prokaryotes
maintained by RegulonDB - UNAM, Cuernavaca, Mexico
metazoa
maintained by platforme ABIMS Roscoff, France
protists
maintained by Ecole Normale Supérieure Paris, France
plants
maintained by Bruno Contreras Moreira, Spain
teaching
maintained by TAGC - Université Aix Marseilles, France

Citing RSAT complete suite of tools:
  • New ! Medina-Rivera A, Defrance M, Sand O, Herrmann C, Castro-Mondragon J, Delerce J, Jaeger S, Blanchet C, Vincens P, Caron C, Staines DM, Contreras-Moreira B, Artufel M, Charbonnier-Khamvongsa L, Hernandez C, Thieffry D, Thomas-Chollier M, van Helden J (2015) RSAT 2015: Regulatory Sequence Analysis Tools . Nucleic Acids Res. 2015 (Web Server issue) in press. [Full text]
  • Thomas-Chollier M, Defrance M, Medina-Rivera A, Sand O, Herrmann C, Thieffry D, van Helden J. (2011) RSAT 2011: regulatory sequence analysis tools. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W86-91. [Pubmed 21715389] [Full text]
  • Thomas-Chollier, M., Sand, O., Turatsinze, J. V., Janky, R., Defrance, M., Vervisch, E., Brohee, S. & van Helden, J. (2008). RSAT: regulatory sequence analysis tools. Nucleic Acids Res. [Pubmed 18495751] [Full text]
  • van Helden, J. (2003). Regulatory sequence analysis tools. Nucleic Acids Res. 2003 Jul 1;31(13):3593-6. [Pubmed 12824373] [Full text] [pdf]
For citing individual tools: the reference of each tool is indicated on top of their query form.

RSAT logos designed by Mauricio Guzman (http://www.altamirastudio.com/)