One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/dyads_m25/peak-motifs_dyads_m25.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/dyads_m25/peak-motifs_dyads_m25_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: dyads_m25_shift5 ; 21 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
dyads_m25_shift5 (dyads_m25dyads_m25)
; dyads_m25 (dyads_m25dyads_m25); m=0 (reference); ncol1=10; shift=5; ncol=16; -----sdGGTGACws- ; Alignment reference a 0 0 0 0 0 1064 1386 0 0 0 0 5516 0 2123 905 0 c 0 0 0 0 0 1795 802 0 0 0 0 0 5516 1210 1463 0 g 0 0 0 0 0 1677 1526 5516 5516 0 5516 0 0 674 2023 0 t 0 0 0 0 0 980 1802 0 0 5516 0 0 0 1509 1125 0

MA0067.1_rc_shift6 (Pax2_rc)
; dyads_m25 versus MA0067.1_rc (Pax2_rc); m=1/20; ncol2=8; w=8; offset=1; strand=R; shift=6; score=0.571144; ------vmrTGAcw-- ; cor=; Ncor= a 0 0 0 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 c 0 0 0 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 g 0 0 0 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 t 0 0 0 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0

MA0498.2_shift8 (MEIS1)
; dyads_m25 versus MA0498.2 (MEIS1); m=2/20; ncol2=7; w=7; offset=3; strand=D; shift=8; score=0.560312; --------wTGACAg- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23727.0 8690.0 0.0 77159.0 0.0 77159.0 17224.0 0 c 0 0 0 0 0 0 0 0 18797.0 5575.0 1249.0 2903.0 77159.0 0.0 14864.0 0 g 0 0 0 0 0 0 0 0 9714.0 3174.0 77159.0 672.0 0.0 9263.0 29965.0 0 t 0 0 0 0 0 0 0 0 24921.0 77159.0 0.0 0.0 1155.0 3861.0 15106.0 0

MA0595.1_rc_shift3 (SREBF1_rc)
; dyads_m25 versus MA0595.1_rc (SREBF1_rc); m=3/20; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.53528; ---rTGGgGTGAy--- ; cor=; Ncor= a 0 0 0 25.0 0.0 0.0 14.0 1.0 0.0 0.0 0.0 58.0 0.0 0 0 0 c 0 0 0 7.0 0.0 11.0 0.0 13.0 7.0 0.0 0.0 0.0 16.0 0 0 0 g 0 0 0 26.0 0.0 45.0 44.0 38.0 51.0 0.0 58.0 0.0 14.0 0 0 0 t 0 0 0 0.0 58.0 2.0 0.0 6.0 0.0 58.0 0.0 0.0 28.0 0 0 0

MA0775.1_shift8 (MEIS3)
; dyads_m25 versus MA0775.1 (MEIS3); m=4/20; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.517827; --------wTGACAgs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1866.0 465.0 0.0 7165.0 53.0 7165.0 1690.0 960.0 c 0 0 0 0 0 0 0 0 60.0 383.0 6.0 20.0 7165.0 8.0 1889.0 2342.0 g 0 0 0 0 0 0 0 0 1788.0 260.0 7165.0 455.0 8.0 468.0 7165.0 2888.0 t 0 0 0 0 0 0 0 0 3451.0 7165.0 0.0 53.0 160.0 145.0 2094.0 975.0

MA0596.1_shift3 (SREBF2)
; dyads_m25 versus MA0596.1 (SREBF2); m=5/20; ncol2=10; w=8; offset=-2; strand=D; shift=3; score=0.508241; ---rTGGgGTGAy--- ; cor=; Ncor= a 0 0 0 24.0 0.0 0.0 10.0 2.0 2.0 0.0 0.0 47.0 2.0 0 0 0 c 0 0 0 9.0 0.0 3.0 0.0 10.0 9.0 0.0 0.0 0.0 16.0 0 0 0 g 0 0 0 14.0 0.0 44.0 37.0 27.0 36.0 0.0 47.0 0.0 2.0 0 0 0 t 0 0 0 0.0 47.0 0.0 0.0 8.0 0.0 47.0 0.0 0.0 27.0 0 0 0

MA0117.2_shift2 (Mafb)
; dyads_m25 versus MA0117.2 (Mafb); m=6/20; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.504734; --awwwTGCTGACd-- ; cor=; Ncor= a 0 0 1237.0 1263.0 1080.0 744.0 264.0 2.0 295.0 31.0 45.0 2182.0 182.0 582.0 0 0 c 0 0 174.0 121.0 216.0 398.0 618.0 14.0 2182.0 36.0 13.0 13.0 2182.0 138.0 0 0 g 0 0 326.0 159.0 182.0 429.0 31.0 2182.0 5.0 2.0 2182.0 17.0 490.0 646.0 0 0 t 0 0 446.0 639.0 704.0 611.0 2182.0 5.0 7.0 2182.0 170.0 13.0 273.0 816.0 0 0

MA0258.2_rc_shift0 (ESR2_rc)
; dyads_m25 versus MA0258.2_rc (ESR2_rc); m=7/20; ncol2=15; w=10; offset=-5; strand=R; shift=0; score=0.496102; rGGtCasksTGACCy- ; cor=; Ncor= a 4095.0 1278.0 977.0 1518.0 66.0 5133.0 1752.0 1228.0 801.0 87.0 89.0 7033.0 41.0 644.0 174.0 0 c 606.0 0.0 363.0 1391.0 6658.0 533.0 2173.0 1688.0 2738.0 57.0 533.0 989.0 8143.0 7170.0 2563.0 0 g 2708.0 5854.0 6469.0 2056.0 398.0 975.0 2510.0 3235.0 4202.0 1.0 7621.0 147.0 0.0 0.0 96.0 0 t 834.0 1111.0 434.0 3278.0 1121.0 1602.0 1808.0 2092.0 502.0 8098.0 0.0 74.0 59.0 429.0 5410.0 0

MA1132.1_shift7 (JUN::JUNB)
; dyads_m25 versus MA1132.1 (JUN::JUNB); m=8/20; ncol2=10; w=8; offset=2; strand=D; shift=7; score=0.481635; -------kaTGACkCA ; cor=; Ncor= a 0 0 0 0 0 0 0 203.0 627.0 11.0 10.0 944.0 27.0 58.0 161.0 931.0 c 0 0 0 0 0 0 0 128.0 134.0 10.0 21.0 10.0 826.0 24.0 707.0 24.0 g 0 0 0 0 0 0 0 408.0 189.0 34.0 921.0 28.0 115.0 353.0 10.0 18.0 t 0 0 0 0 0 0 0 261.0 50.0 946.0 47.0 18.0 33.0 565.0 122.0 27.0

MA0774.1_shift8 (MEIS2)
; dyads_m25 versus MA0774.1 (MEIS2); m=9/20; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.480113; --------tTGACAGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 408.0 31.0 0.0 1351.0 9.0 1351.0 83.0 157.0 c 0 0 0 0 0 0 0 0 264.0 3.0 0.0 3.0 1351.0 7.0 98.0 701.0 g 0 0 0 0 0 0 0 0 314.0 40.0 1351.0 25.0 0.0 4.0 1351.0 650.0 t 0 0 0 0 0 0 0 0 1351.0 1351.0 0.0 62.0 5.0 0.0 67.0 88.0

MA0160.1_rc_shift8 (NR4A2_rc)
; dyads_m25 versus MA0160.1_rc (NR4A2_rc); m=10/20; ncol2=8; w=7; offset=3; strand=R; shift=8; score=0.474898; --------gTGACCTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.0 0.0 1.0 10.0 0.0 1.0 0.0 1.0 c 0 0 0 0 0 0 0 0 2.0 0.0 0.0 0.0 11.0 13.0 1.0 3.0 g 0 0 0 0 0 0 0 0 8.0 0.0 13.0 2.0 0.0 0.0 0.0 1.0 t 0 0 0 0 0 0 0 0 3.0 14.0 0.0 2.0 3.0 0.0 13.0 8.0

MA0099.3_rc_shift7 (FOS::JUN_rc)
; dyads_m25 versus MA0099.3_rc (FOS::JUN_rc); m=11/20; ncol2=10; w=8; offset=2; strand=R; shift=7; score=0.473958; -------krTGACTCA ; cor=; Ncor= a 0 0 0 0 0 0 0 162.0 568.0 4.0 4.0 991.0 54.0 45.0 168.0 990.0 c 0 0 0 0 0 0 0 164.0 95.0 2.0 3.0 2.0 688.0 4.0 824.0 2.0 g 0 0 0 0 0 0 0 397.0 313.0 2.0 963.0 2.0 180.0 131.0 1.0 5.0 t 0 0 0 0 0 0 0 277.0 24.0 992.0 30.0 5.0 78.0 820.0 7.0 3.0

MA0842.2_shift1 (NRL)
; dyads_m25 versus MA0842.2 (NRL); m=12/20; ncol2=13; w=9; offset=-4; strand=D; shift=1; score=0.462372; -aawwrTGCTGACg-- ; cor=; Ncor= a 0 14408.0 21189.0 17467.0 14033.0 6835.0 581.0 1.0 1008.0 0.0 73.0 27228.0 47.0 6001.0 0 0 c 0 3102.0 838.0 319.0 1314.0 5669.0 2768.0 0.0 27228.0 8.0 0.0 0.0 27228.0 1669.0 0 0 g 0 5588.0 3685.0 635.0 822.0 7983.0 68.0 27228.0 22.0 0.0 27228.0 4.0 559.0 14528.0 0 0 t 0 4130.0 6039.0 9761.0 13194.0 6741.0 27228.0 0.0 14.0 27228.0 1036.0 0.0 2394.0 5030.0 0 0

MA0513.1_rc_shift6 (SMAD2::SMAD3::SMAD4_rc)
; dyads_m25 versus MA0513.1_rc (SMAD2::SMAD3::SMAD4_rc); m=13/20; ncol2=13; w=9; offset=1; strand=R; shift=6; score=0.462213; ------agGTGmsAGA ; cor=; Ncor= a 0 0 0 0 0 0 540.0 152.0 0.0 97.0 0.0 283.0 23.0 899.0 0.0 718.0 c 0 0 0 0 0 0 35.0 47.0 133.0 18.0 3.0 280.0 539.0 0.0 0.0 103.0 g 0 0 0 0 0 0 214.0 583.0 736.0 19.0 896.0 125.0 231.0 0.0 899.0 45.0 t 0 0 0 0 0 0 110.0 117.0 30.0 765.0 0.0 211.0 106.0 0.0 0.0 33.0

MA0604.1_shift8 (Atf1)
; dyads_m25 versus MA0604.1 (Atf1); m=14/20; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.459917; --------rTGACGTa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 462.0 24.0 0.0 1000.0 0.0 7.0 90.0 600.0 c 0 0 0 0 0 0 0 0 86.0 16.0 22.0 0.0 1000.0 0.0 198.0 138.0 g 0 0 0 0 0 0 0 0 387.0 0.0 803.0 0.0 0.0 993.0 0.0 163.0 t 0 0 0 0 0 0 0 0 65.0 960.0 175.0 0.0 0.0 0.0 712.0 100.0

MA1128.1_shift6 (FOSL1::JUN)
; dyads_m25 versus MA1128.1 (FOSL1::JUN); m=15/20; ncol2=13; w=9; offset=1; strand=D; shift=6; score=0.456675; ------kkrTGACTCA ; cor=; Ncor= a 0 0 0 0 0 0 208.0 172.0 602.0 1.0 3.0 994.0 26.0 33.0 159.0 984.0 c 0 0 0 0 0 0 246.0 159.0 89.0 2.0 2.0 2.0 826.0 2.0 835.0 4.0 g 0 0 0 0 0 0 253.0 380.0 283.0 1.0 957.0 2.0 51.0 140.0 2.0 9.0 t 0 0 0 0 0 0 293.0 289.0 26.0 996.0 38.0 3.0 97.0 826.0 4.0 4.0

MA1141.1_rc_shift6 (FOS::JUND_rc)
; dyads_m25 versus MA1141.1_rc (FOS::JUND_rc); m=16/20; ncol2=13; w=9; offset=1; strand=R; shift=6; score=0.45031; ------bkrTGACTCA ; cor=; Ncor= a 0 0 0 0 0 0 180.0 185.0 612.0 0.0 0.0 999.0 19.0 15.0 129.0 999.0 c 0 0 0 0 0 0 292.0 195.0 77.0 0.0 0.0 0.0 867.0 0.0 871.0 0.0 g 0 0 0 0 0 0 264.0 370.0 290.0 0.0 970.0 0.0 40.0 91.0 0.0 1.0 t 0 0 0 0 0 0 264.0 250.0 21.0 999.0 29.0 0.0 75.0 894.0 0.0 0.0

MA1535.1_rc_shift8 (NR2C1_rc)
; dyads_m25 versus MA1535.1_rc (NR2C1_rc); m=17/20; ncol2=9; w=7; offset=3; strand=R; shift=8; score=0.442833; --------rTGACCyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2499.0 0.0 0.0 9622.0 0.0 297.0 55.0 1316.0 c 0 0 0 0 0 0 0 0 2039.0 1716.0 321.0 271.0 9622.0 9622.0 4756.0 5587.0 g 0 0 0 0 0 0 0 0 2786.0 0.0 9622.0 0.0 0.0 0.0 227.0 1225.0 t 0 0 0 0 0 0 0 0 2298.0 9622.0 0.0 0.0 0.0 0.0 4866.0 4035.0

MA0609.2_shift5 (CREM)
; dyads_m25 versus MA0609.2 (CREM); m=18/20; ncol2=16; w=10; offset=0; strand=D; shift=5; score=0.440461; -----gcrgTGACGTC ; cor=; Ncor= a 0 0 0 0 0 3865.0 3966.0 5881.0 2936.0 559.0 434.0 15694.0 517.0 1582.0 400.0 672.0 c 0 0 0 0 0 4230.0 5521.0 2908.0 2159.0 730.0 1038.0 313.0 14031.0 901.0 622.0 14883.0 g 0 0 0 0 0 5132.0 3956.0 4474.0 11144.0 506.0 14883.0 619.0 897.0 14026.0 314.0 1039.0 t 0 0 0 0 0 3800.0 3584.0 3764.0 788.0 15232.0 672.0 401.0 1582.0 518.0 15691.0 433.0

MA1143.1_shift8 (FOSL1::JUND(var.2))
; dyads_m25 versus MA1143.1 (FOSL1::JUND(var.2)); m=19/20; ncol2=10; w=7; offset=3; strand=D; shift=8; score=0.413506; --------rTGACgym ; cor=; Ncor= a 0 0 0 0 0 0 0 0 561.0 36.0 39.0 870.0 32.0 116.0 117.0 546.0 c 0 0 0 0 0 0 0 0 75.0 50.0 101.0 45.0 835.0 59.0 262.0 330.0 g 0 0 0 0 0 0 0 0 324.0 44.0 777.0 41.0 64.0 649.0 39.0 83.0 t 0 0 0 0 0 0 0 0 40.0 870.0 82.0 44.0 68.0 176.0 582.0 41.0

MA0656.1_rc_shift7 (JDP2(var.2)_rc)
; dyads_m25 versus MA0656.1_rc (JDP2(var.2)_rc); m=20/20; ncol2=12; w=8; offset=2; strand=R; shift=7; score=0.401109; -------grTGACGTC ; cor=; Ncor= a 0 0 0 0 0 0 0 3778.0 12283.0 0.0 1.0 24403.0 2.0 338.0 6.0 1939.0 c 0 0 0 0 0 0 0 4124.0 835.0 9.0 4.0 7.0 24403.0 6.0 6.0 24403.0 g 0 0 0 0 0 0 0 12117.0 12119.0 10.0 24403.0 24.0 5.0 24403.0 7.0 0.0 t 0 0 0 0 0 0 0 4383.0 47.0 24403.0 1777.0 15.0 587.0 5.0 24403.0 11.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m25_shift5 (dyads_m25dyads_m25)				; dyads_m25 (dyads_m25dyads_m25); m=0 (reference); ncol1=10; shift=5; ncol=16; -----sdGGTGACws- ; Alignment reference a 0 0 0 0 0 1064 1386 0 0 0 0 5516 0 2123 905 0 c 0 0 0 0 0 1795 802 0 0 0 0 0 5516 1210 1463 0 g 0 0 0 0 0 1677 1526 5516 5516 0 5516 0 0 674 2023 0 t 0 0 0 0 0 980 1802 0 0 5516 0 0 0 1509 1125 0
MA0067.1_rc_shift6 (Pax2_rc)				; dyads_m25 versus MA0067.1_rc (Pax2_rc); m=1/20; ncol2=8; w=8; offset=1; strand=R; shift=6; score=0.571144; ------vmrTGAcw-- ; cor=; Ncor= a 0 0 0 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 c 0 0 0 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 g 0 0 0 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 t 0 0 0 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0
MA0498.2_shift8 (MEIS1)				; dyads_m25 versus MA0498.2 (MEIS1); m=2/20; ncol2=7; w=7; offset=3; strand=D; shift=8; score=0.560312; --------wTGACAg- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 23727.0 8690.0 0.0 77159.0 0.0 77159.0 17224.0 0 c 0 0 0 0 0 0 0 0 18797.0 5575.0 1249.0 2903.0 77159.0 0.0 14864.0 0 g 0 0 0 0 0 0 0 0 9714.0 3174.0 77159.0 672.0 0.0 9263.0 29965.0 0 t 0 0 0 0 0 0 0 0 24921.0 77159.0 0.0 0.0 1155.0 3861.0 15106.0 0
MA0595.1_rc_shift3 (SREBF1_rc)				; dyads_m25 versus MA0595.1_rc (SREBF1_rc); m=3/20; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.53528; ---rTGGgGTGAy--- ; cor=; Ncor= a 0 0 0 25.0 0.0 0.0 14.0 1.0 0.0 0.0 0.0 58.0 0.0 0 0 0 c 0 0 0 7.0 0.0 11.0 0.0 13.0 7.0 0.0 0.0 0.0 16.0 0 0 0 g 0 0 0 26.0 0.0 45.0 44.0 38.0 51.0 0.0 58.0 0.0 14.0 0 0 0 t 0 0 0 0.0 58.0 2.0 0.0 6.0 0.0 58.0 0.0 0.0 28.0 0 0 0
MA0775.1_shift8 (MEIS3)				; dyads_m25 versus MA0775.1 (MEIS3); m=4/20; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.517827; --------wTGACAgs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1866.0 465.0 0.0 7165.0 53.0 7165.0 1690.0 960.0 c 0 0 0 0 0 0 0 0 60.0 383.0 6.0 20.0 7165.0 8.0 1889.0 2342.0 g 0 0 0 0 0 0 0 0 1788.0 260.0 7165.0 455.0 8.0 468.0 7165.0 2888.0 t 0 0 0 0 0 0 0 0 3451.0 7165.0 0.0 53.0 160.0 145.0 2094.0 975.0
MA0596.1_shift3 (SREBF2)				; dyads_m25 versus MA0596.1 (SREBF2); m=5/20; ncol2=10; w=8; offset=-2; strand=D; shift=3; score=0.508241; ---rTGGgGTGAy--- ; cor=; Ncor= a 0 0 0 24.0 0.0 0.0 10.0 2.0 2.0 0.0 0.0 47.0 2.0 0 0 0 c 0 0 0 9.0 0.0 3.0 0.0 10.0 9.0 0.0 0.0 0.0 16.0 0 0 0 g 0 0 0 14.0 0.0 44.0 37.0 27.0 36.0 0.0 47.0 0.0 2.0 0 0 0 t 0 0 0 0.0 47.0 0.0 0.0 8.0 0.0 47.0 0.0 0.0 27.0 0 0 0
MA0117.2_shift2 (Mafb)				; dyads_m25 versus MA0117.2 (Mafb); m=6/20; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.504734; --awwwTGCTGACd-- ; cor=; Ncor= a 0 0 1237.0 1263.0 1080.0 744.0 264.0 2.0 295.0 31.0 45.0 2182.0 182.0 582.0 0 0 c 0 0 174.0 121.0 216.0 398.0 618.0 14.0 2182.0 36.0 13.0 13.0 2182.0 138.0 0 0 g 0 0 326.0 159.0 182.0 429.0 31.0 2182.0 5.0 2.0 2182.0 17.0 490.0 646.0 0 0 t 0 0 446.0 639.0 704.0 611.0 2182.0 5.0 7.0 2182.0 170.0 13.0 273.0 816.0 0 0
MA0258.2_rc_shift0 (ESR2_rc)				; dyads_m25 versus MA0258.2_rc (ESR2_rc); m=7/20; ncol2=15; w=10; offset=-5; strand=R; shift=0; score=0.496102; rGGtCasksTGACCy- ; cor=; Ncor= a 4095.0 1278.0 977.0 1518.0 66.0 5133.0 1752.0 1228.0 801.0 87.0 89.0 7033.0 41.0 644.0 174.0 0 c 606.0 0.0 363.0 1391.0 6658.0 533.0 2173.0 1688.0 2738.0 57.0 533.0 989.0 8143.0 7170.0 2563.0 0 g 2708.0 5854.0 6469.0 2056.0 398.0 975.0 2510.0 3235.0 4202.0 1.0 7621.0 147.0 0.0 0.0 96.0 0 t 834.0 1111.0 434.0 3278.0 1121.0 1602.0 1808.0 2092.0 502.0 8098.0 0.0 74.0 59.0 429.0 5410.0 0
MA1132.1_shift7 (JUN::JUNB)				; dyads_m25 versus MA1132.1 (JUN::JUNB); m=8/20; ncol2=10; w=8; offset=2; strand=D; shift=7; score=0.481635; -------kaTGACkCA ; cor=; Ncor= a 0 0 0 0 0 0 0 203.0 627.0 11.0 10.0 944.0 27.0 58.0 161.0 931.0 c 0 0 0 0 0 0 0 128.0 134.0 10.0 21.0 10.0 826.0 24.0 707.0 24.0 g 0 0 0 0 0 0 0 408.0 189.0 34.0 921.0 28.0 115.0 353.0 10.0 18.0 t 0 0 0 0 0 0 0 261.0 50.0 946.0 47.0 18.0 33.0 565.0 122.0 27.0
MA0774.1_shift8 (MEIS2)				; dyads_m25 versus MA0774.1 (MEIS2); m=9/20; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.480113; --------tTGACAGs ; cor=; Ncor= a 0 0 0 0 0 0 0 0 408.0 31.0 0.0 1351.0 9.0 1351.0 83.0 157.0 c 0 0 0 0 0 0 0 0 264.0 3.0 0.0 3.0 1351.0 7.0 98.0 701.0 g 0 0 0 0 0 0 0 0 314.0 40.0 1351.0 25.0 0.0 4.0 1351.0 650.0 t 0 0 0 0 0 0 0 0 1351.0 1351.0 0.0 62.0 5.0 0.0 67.0 88.0
MA0160.1_rc_shift8 (NR4A2_rc)				; dyads_m25 versus MA0160.1_rc (NR4A2_rc); m=10/20; ncol2=8; w=7; offset=3; strand=R; shift=8; score=0.474898; --------gTGACCTt ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.0 0.0 1.0 10.0 0.0 1.0 0.0 1.0 c 0 0 0 0 0 0 0 0 2.0 0.0 0.0 0.0 11.0 13.0 1.0 3.0 g 0 0 0 0 0 0 0 0 8.0 0.0 13.0 2.0 0.0 0.0 0.0 1.0 t 0 0 0 0 0 0 0 0 3.0 14.0 0.0 2.0 3.0 0.0 13.0 8.0
MA0099.3_rc_shift7 (FOS::JUN_rc)				; dyads_m25 versus MA0099.3_rc (FOS::JUN_rc); m=11/20; ncol2=10; w=8; offset=2; strand=R; shift=7; score=0.473958; -------krTGACTCA ; cor=; Ncor= a 0 0 0 0 0 0 0 162.0 568.0 4.0 4.0 991.0 54.0 45.0 168.0 990.0 c 0 0 0 0 0 0 0 164.0 95.0 2.0 3.0 2.0 688.0 4.0 824.0 2.0 g 0 0 0 0 0 0 0 397.0 313.0 2.0 963.0 2.0 180.0 131.0 1.0 5.0 t 0 0 0 0 0 0 0 277.0 24.0 992.0 30.0 5.0 78.0 820.0 7.0 3.0
MA0842.2_shift1 (NRL)				; dyads_m25 versus MA0842.2 (NRL); m=12/20; ncol2=13; w=9; offset=-4; strand=D; shift=1; score=0.462372; -aawwrTGCTGACg-- ; cor=; Ncor= a 0 14408.0 21189.0 17467.0 14033.0 6835.0 581.0 1.0 1008.0 0.0 73.0 27228.0 47.0 6001.0 0 0 c 0 3102.0 838.0 319.0 1314.0 5669.0 2768.0 0.0 27228.0 8.0 0.0 0.0 27228.0 1669.0 0 0 g 0 5588.0 3685.0 635.0 822.0 7983.0 68.0 27228.0 22.0 0.0 27228.0 4.0 559.0 14528.0 0 0 t 0 4130.0 6039.0 9761.0 13194.0 6741.0 27228.0 0.0 14.0 27228.0 1036.0 0.0 2394.0 5030.0 0 0
MA0513.1_rc_shift6 (SMAD2::SMAD3::SMAD4_rc)				; dyads_m25 versus MA0513.1_rc (SMAD2::SMAD3::SMAD4_rc); m=13/20; ncol2=13; w=9; offset=1; strand=R; shift=6; score=0.462213; ------agGTGmsAGA ; cor=; Ncor= a 0 0 0 0 0 0 540.0 152.0 0.0 97.0 0.0 283.0 23.0 899.0 0.0 718.0 c 0 0 0 0 0 0 35.0 47.0 133.0 18.0 3.0 280.0 539.0 0.0 0.0 103.0 g 0 0 0 0 0 0 214.0 583.0 736.0 19.0 896.0 125.0 231.0 0.0 899.0 45.0 t 0 0 0 0 0 0 110.0 117.0 30.0 765.0 0.0 211.0 106.0 0.0 0.0 33.0
MA0604.1_shift8 (Atf1)				; dyads_m25 versus MA0604.1 (Atf1); m=14/20; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.459917; --------rTGACGTa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 462.0 24.0 0.0 1000.0 0.0 7.0 90.0 600.0 c 0 0 0 0 0 0 0 0 86.0 16.0 22.0 0.0 1000.0 0.0 198.0 138.0 g 0 0 0 0 0 0 0 0 387.0 0.0 803.0 0.0 0.0 993.0 0.0 163.0 t 0 0 0 0 0 0 0 0 65.0 960.0 175.0 0.0 0.0 0.0 712.0 100.0
MA1128.1_shift6 (FOSL1::JUN)				; dyads_m25 versus MA1128.1 (FOSL1::JUN); m=15/20; ncol2=13; w=9; offset=1; strand=D; shift=6; score=0.456675; ------kkrTGACTCA ; cor=; Ncor= a 0 0 0 0 0 0 208.0 172.0 602.0 1.0 3.0 994.0 26.0 33.0 159.0 984.0 c 0 0 0 0 0 0 246.0 159.0 89.0 2.0 2.0 2.0 826.0 2.0 835.0 4.0 g 0 0 0 0 0 0 253.0 380.0 283.0 1.0 957.0 2.0 51.0 140.0 2.0 9.0 t 0 0 0 0 0 0 293.0 289.0 26.0 996.0 38.0 3.0 97.0 826.0 4.0 4.0
MA1141.1_rc_shift6 (FOS::JUND_rc)				; dyads_m25 versus MA1141.1_rc (FOS::JUND_rc); m=16/20; ncol2=13; w=9; offset=1; strand=R; shift=6; score=0.45031; ------bkrTGACTCA ; cor=; Ncor= a 0 0 0 0 0 0 180.0 185.0 612.0 0.0 0.0 999.0 19.0 15.0 129.0 999.0 c 0 0 0 0 0 0 292.0 195.0 77.0 0.0 0.0 0.0 867.0 0.0 871.0 0.0 g 0 0 0 0 0 0 264.0 370.0 290.0 0.0 970.0 0.0 40.0 91.0 0.0 1.0 t 0 0 0 0 0 0 264.0 250.0 21.0 999.0 29.0 0.0 75.0 894.0 0.0 0.0
MA1535.1_rc_shift8 (NR2C1_rc)				; dyads_m25 versus MA1535.1_rc (NR2C1_rc); m=17/20; ncol2=9; w=7; offset=3; strand=R; shift=8; score=0.442833; --------rTGACCyy ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2499.0 0.0 0.0 9622.0 0.0 297.0 55.0 1316.0 c 0 0 0 0 0 0 0 0 2039.0 1716.0 321.0 271.0 9622.0 9622.0 4756.0 5587.0 g 0 0 0 0 0 0 0 0 2786.0 0.0 9622.0 0.0 0.0 0.0 227.0 1225.0 t 0 0 0 0 0 0 0 0 2298.0 9622.0 0.0 0.0 0.0 0.0 4866.0 4035.0
MA0609.2_shift5 (CREM)				; dyads_m25 versus MA0609.2 (CREM); m=18/20; ncol2=16; w=10; offset=0; strand=D; shift=5; score=0.440461; -----gcrgTGACGTC ; cor=; Ncor= a 0 0 0 0 0 3865.0 3966.0 5881.0 2936.0 559.0 434.0 15694.0 517.0 1582.0 400.0 672.0 c 0 0 0 0 0 4230.0 5521.0 2908.0 2159.0 730.0 1038.0 313.0 14031.0 901.0 622.0 14883.0 g 0 0 0 0 0 5132.0 3956.0 4474.0 11144.0 506.0 14883.0 619.0 897.0 14026.0 314.0 1039.0 t 0 0 0 0 0 3800.0 3584.0 3764.0 788.0 15232.0 672.0 401.0 1582.0 518.0 15691.0 433.0
MA1143.1_shift8 (FOSL1::JUND(var.2))				; dyads_m25 versus MA1143.1 (FOSL1::JUND(var.2)); m=19/20; ncol2=10; w=7; offset=3; strand=D; shift=8; score=0.413506; --------rTGACgym ; cor=; Ncor= a 0 0 0 0 0 0 0 0 561.0 36.0 39.0 870.0 32.0 116.0 117.0 546.0 c 0 0 0 0 0 0 0 0 75.0 50.0 101.0 45.0 835.0 59.0 262.0 330.0 g 0 0 0 0 0 0 0 0 324.0 44.0 777.0 41.0 64.0 649.0 39.0 83.0 t 0 0 0 0 0 0 0 0 40.0 870.0 82.0 44.0 68.0 176.0 582.0 41.0
MA0656.1_rc_shift7 (JDP2(var.2)_rc)				; dyads_m25 versus MA0656.1_rc (JDP2(var.2)_rc); m=20/20; ncol2=12; w=8; offset=2; strand=R; shift=7; score=0.401109; -------grTGACGTC ; cor=; Ncor= a 0 0 0 0 0 0 0 3778.0 12283.0 0.0 1.0 24403.0 2.0 338.0 6.0 1939.0 c 0 0 0 0 0 0 0 4124.0 835.0 9.0 4.0 7.0 24403.0 6.0 6.0 24403.0 g 0 0 0 0 0 0 0 12117.0 12119.0 10.0 24403.0 24.0 5.0 24403.0 7.0 0.0 t 0 0 0 0 0 0 0 4383.0 47.0 24403.0 1777.0 15.0 587.0 5.0 24403.0 11.0