One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/dyads_m34/peak-motifs_dyads_m34.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/dyads_m34/peak-motifs_dyads_m34_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: dyads_m34_shift7 ; 17 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
dyads_m34_shift7 (dyads_m34dyads_m34)
; dyads_m34 (dyads_m34dyads_m34); m=0 (reference); ncol1=10; shift=7; ncol=19; -------gsTGGGAAgs-- ; Alignment reference a 0 0 0 0 0 0 0 1168 958 0 0 0 0 6763 6763 1508 1598 0 0 c 0 0 0 0 0 0 0 1672 2977 0 3 0 0 0 0 1576 1717 0 0 g 0 0 0 0 0 0 0 2294 1830 0 6760 6763 6763 0 0 2594 2185 0 0 t 0 0 0 0 0 0 0 1629 998 6763 0 0 0 0 0 1085 1263 0 0

MA1116.1_shift7 (RBPJ)
; dyads_m34 versus MA1116.1 (RBPJ); m=1/16; ncol2=10; w=10; offset=0; strand=D; shift=7; score=0.992585; -------bsTGGGAAmg-- ; cor=; Ncor= a 0 0 0 0 0 0 0 345.0 489.0 2.0 35.0 9.0 7.0 2369.0 2382.0 742.0 565.0 0 0 c 0 0 0 0 0 0 0 842.0 872.0 12.0 25.0 20.0 8.0 0.0 15.0 655.0 579.0 0 0 g 0 0 0 0 0 0 0 604.0 787.0 2.0 2341.0 2313.0 2309.0 4.0 1.0 592.0 711.0 0 0 t 0 0 0 0 0 0 0 611.0 254.0 2386.0 1.0 60.0 78.0 29.0 4.0 413.0 547.0 0 0

MA0606.1_rc_shift7 (NFAT5_rc)
; dyads_m34 versus MA0606.1_rc (NFAT5_rc); m=2/16; ncol2=10; w=10; offset=0; strand=R; shift=7; score=0.724761; -------wrTGGAAAat-- ; cor=; Ncor= a 0 0 0 0 0 0 0 322.0 548.0 85.0 89.0 85.0 827.0 1000.0 1000.0 649.0 210.0 0 0 c 0 0 0 0 0 0 0 248.0 41.0 0.0 85.0 0.0 0.0 0.0 0.0 88.0 210.0 0 0 g 0 0 0 0 0 0 0 163.0 287.0 84.0 826.0 915.0 84.0 0.0 0.0 88.0 210.0 0 0 t 0 0 0 0 0 0 0 268.0 124.0 831.0 0.0 0.0 89.0 0.0 0.0 176.0 371.0 0 0

MA0519.1_rc_shift6 (Stat5a::Stat5b_rc)
; dyads_m34 versus MA0519.1_rc (Stat5a::Stat5b_rc); m=3/16; ncol2=11; w=10; offset=-1; strand=R; shift=6; score=0.695262; ------TTCYkGGAAay-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0 1526.0 0.0 824.0 3326.0 3449.0 166.0 14907.0 16507.0 7937.0 3584.0 0 0 c 0 0 0 0 0 0 1621.0 0.0 16507.0 4140.0 0.0 0.0 0.0 0.0 0.0 2901.0 4425.0 0 0 g 0 0 0 0 0 0 0.0 93.0 0.0 0.0 6137.0 12795.0 16341.0 1600.0 0.0 3596.0 2326.0 0 0 t 0 0 0 0 0 0 14886.0 14888.0 0.0 11543.0 7044.0 263.0 0.0 0.0 0.0 2073.0 6172.0 0 0

MA1601.1_shift6 (ZNF75D)
; dyads_m34 versus MA1601.1 (ZNF75D); m=4/16; ncol2=10; w=9; offset=-1; strand=D; shift=6; score=0.688225; ------rtGTGGGArA--- ; cor=; Ncor= a 0 0 0 0 0 0 2111.0 1057.0 2.0 10.0 26.0 46.0 24.0 6706.0 4094.0 5245.0 0 0 0 c 0 0 0 0 0 0 1573.0 715.0 0.0 59.0 18.0 44.0 29.0 20.0 576.0 256.0 0 0 0 g 0 0 0 0 0 0 1850.0 1468.0 6757.0 4.0 6710.0 6545.0 6678.0 15.0 1693.0 746.0 0 0 0 t 0 0 0 0 0 0 1225.0 3519.0 0.0 6686.0 5.0 124.0 28.0 18.0 396.0 512.0 0 0 0

MA1122.1_shift6 (TFDP1)
; dyads_m34 versus MA1122.1 (TFDP1); m=5/16; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.648329; ------gsGCGGGAAss-- ; cor=; Ncor= a 0 0 0 0 0 0 411.0 263.0 48.0 28.0 14.0 36.0 27.0 1855.0 1645.0 465.0 381.0 0 0 c 0 0 0 0 0 0 491.0 684.0 71.0 1886.0 54.0 80.0 32.0 24.0 170.0 647.0 604.0 0 0 g 0 0 0 0 0 0 777.0 940.0 1862.0 22.0 1932.0 1865.0 1919.0 98.0 137.0 648.0 648.0 0 0 t 0 0 0 0 0 0 328.0 120.0 26.0 71.0 7.0 26.0 29.0 30.0 55.0 247.0 374.0 0 0

MA0144.2_shift5 (STAT3)
; dyads_m34 versus MA0144.2 (STAT3); m=6/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.632226; -----yTKCykGGAAr--- ; cor=; Ncor= a 0 0 0 0 0 1936.0 708.0 250.0 1006.0 840.0 3692.0 1574.0 2532.0 21620.0 21620.0 9311.0 0 0 0 c 0 0 0 0 0 8571.0 0.0 346.0 19585.0 7780.0 0.0 0.0 0.0 0.0 0.0 962.0 0 0 0 g 0 0 0 0 0 3801.0 0.0 5850.0 0.0 0.0 11456.0 20046.0 18686.0 0.0 0.0 6579.0 0 0 0 t 0 0 0 0 0 7312.0 20912.0 15174.0 1029.0 13000.0 6472.0 0.0 402.0 0.0 0.0 4768.0 0 0 0

MA1625.1_rc_shift3 (Stat5b_rc)
; dyads_m34 versus MA1625.1_rc (Stat5b_rc); m=7/16; ncol2=15; w=10; offset=-4; strand=R; shift=3; score=0.562618; ---sayTTCTgGGAAwtr- ; cor=; Ncor= a 0 0 0 600.0 852.0 533.0 21.0 85.0 17.0 76.0 425.0 467.0 39.0 2600.0 2604.0 916.0 629.0 702.0 0 c 0 0 0 729.0 542.0 711.0 50.0 86.0 2717.0 150.0 127.0 43.0 23.0 34.0 51.0 537.0 647.0 682.0 0 g 0 0 0 768.0 680.0 615.0 25.0 35.0 16.0 60.0 1746.0 2176.0 2666.0 34.0 54.0 607.0 576.0 762.0 0 t 0 0 0 663.0 686.0 901.0 2664.0 2554.0 10.0 2474.0 462.0 74.0 32.0 92.0 51.0 700.0 908.0 614.0 0

MA0137.3_shift5 (STAT1)
; dyads_m34 versus MA0137.3 (STAT1); m=8/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.557385; -----tTTCyrGGAAa--- ; cor=; Ncor= a 0 0 0 0 0 366.0 0.0 0.0 361.0 109.0 1739.0 163.0 29.0 3620.0 3624.0 1879.0 0 0 0 c 0 0 0 0 0 731.0 52.0 6.0 3262.0 2009.0 0.0 0.0 7.0 0.0 5.0 311.0 0 0 0 g 0 0 0 0 0 785.0 0.0 110.0 6.0 0.0 1637.0 3466.0 3426.0 9.0 0.0 725.0 0 0 0 t 0 0 0 0 0 1747.0 3577.0 3513.0 0.0 1511.0 253.0 0.0 167.0 0.0 0.0 714.0 0 0 0

MA0471.2_shift4 (E2F6)
; dyads_m34 versus MA0471.2 (E2F6); m=9/16; ncol2=13; w=10; offset=-3; strand=D; shift=4; score=0.539487; ----grrGGCGGGAArs-- ; cor=; Ncor= a 0 0 0 0 7296.0 8379.0 9537.0 2110.0 266.0 3856.0 1173.0 338.0 354.0 29337.0 25725.0 8995.0 7616.0 0 0 c 0 0 0 0 8075.0 7405.0 5102.0 1148.0 837.0 26424.0 539.0 434.0 834.0 1171.0 1595.0 7410.0 8477.0 0 0 g 0 0 0 0 12358.0 11649.0 11562.0 29387.0 31790.0 693.0 30573.0 31973.0 31614.0 2322.0 5021.0 12530.0 11405.0 0 0 t 0 0 0 0 5369.0 5665.0 6897.0 453.0 205.0 2125.0 813.0 353.0 296.0 268.0 757.0 4163.0 5600.0 0 0

MA0518.1_shift5 (Stat4)
; dyads_m34 versus MA0518.1 (Stat4); m=10/16; ncol2=14; w=10; offset=-2; strand=D; shift=5; score=0.528507; -----yTTCyrRGAArysr ; cor=; Ncor= a 0 0 0 0 0 211.0 12.0 26.0 632.0 307.0 1450.0 733.0 45.0 2873.0 2873.0 1573.0 486.0 632.0 889.0 c 0 0 0 0 0 1019.0 2.0 0.0 2229.0 1491.0 28.0 0.0 0.0 0.0 0.0 279.0 785.0 721.0 443.0 g 0 0 0 0 0 484.0 0.0 529.0 12.0 72.0 1223.0 2134.0 2828.0 0.0 0.0 833.0 685.0 1028.0 1117.0 t 0 0 0 0 0 1159.0 2859.0 2318.0 0.0 1003.0 172.0 6.0 0.0 0.0 0.0 188.0 917.0 492.0 424.0

MA0152.1_rc_shift10 (NFATC2_rc)
; dyads_m34 versus MA0152.1_rc (NFATC2_rc); m=11/16; ncol2=7; w=7; offset=3; strand=R; shift=10; score=0.500042; ----------TGGAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.0 0.0 0.0 26.0 24.0 21.0 20.0 0 0 c 0 0 0 0 0 0 0 0 0 0 1.0 0.0 0.0 0.0 0.0 2.0 2.0 0 0 g 0 0 0 0 0 0 0 0 0 0 3.0 26.0 25.0 0.0 1.0 2.0 1.0 0 0 t 0 0 0 0 0 0 0 0 0 0 18.0 0.0 1.0 0.0 1.0 1.0 3.0 0 0

MA1624.1_rc_shift4 (Stat5a_rc)
; dyads_m34 versus MA1624.1_rc (Stat5a_rc); m=12/16; ncol2=12; w=9; offset=-3; strand=R; shift=4; score=0.486667; ----dtTTCTTGGAAw--- ; cor=; Ncor= a 0 0 0 0 1450.0 1066.0 73.0 87.0 32.0 103.0 598.0 369.0 41.0 4130.0 3621.0 1331.0 0 0 0 c 0 0 0 0 687.0 988.0 101.0 49.0 4441.0 980.0 137.0 28.0 26.0 144.0 207.0 1004.0 0 0 0 g 0 0 0 0 1217.0 1028.0 66.0 41.0 22.0 80.0 588.0 4046.0 4381.0 89.0 372.0 851.0 0 0 0 t 0 0 0 0 1160.0 1432.0 4274.0 4337.0 19.0 3351.0 3191.0 71.0 66.0 151.0 314.0 1328.0 0 0 0

MA1154.1_rc_shift0 (ZNF282_rc)
; dyads_m34 versus MA1154.1_rc (ZNF282_rc); m=13/16; ncol2=17; w=10; offset=-7; strand=R; shift=0; score=0.47964; stmGTGTTrkGGGAAAg-- ; cor=; Ncor= a 51.0 43.0 129.0 2.0 7.0 3.0 2.0 61.0 126.0 21.0 2.0 1.0 0.0 380.0 387.0 378.0 45.0 0 0 c 97.0 60.0 297.0 2.0 2.0 4.0 0.0 37.0 2.0 0.0 3.0 0.0 2.0 3.0 8.0 7.0 50.0 0 0 g 98.0 40.0 0.0 210.0 44.0 210.0 0.0 3.0 132.0 99.0 205.0 208.0 209.0 2.0 0.0 21.0 196.0 0 0 t 44.0 157.0 14.0 1.0 242.0 2.0 277.0 256.0 12.0 140.0 0.0 0.0 0.0 3.0 16.0 39.0 21.0 0 0

MA0154.4_rc_shift2 (EBF1_rc)
; dyads_m34 versus MA0154.4_rc (EBF1_rc); m=14/16; ncol2=15; w=10; offset=-5; strand=R; shift=2; score=0.478147; --wgTCCCCTGGGGAyw-- ; cor=; Ncor= a 0 0 13513.0 11042.0 2477.0 1346.0 666.0 662.0 2381.0 7250.0 2349.0 1772.0 1230.0 7519.0 33070.0 10987.0 11506.0 0 0 c 0 0 9173.0 9855.0 4957.0 32761.0 42789.0 41651.0 38728.0 1723.0 862.0 443.0 371.0 1920.0 5497.0 13481.0 10891.0 0 0 g 0 0 10836.0 13299.0 6355.0 2462.0 455.0 495.0 814.0 1707.0 39675.0 42562.0 43256.0 34665.0 4506.0 9554.0 8868.0 0 0 t 0 0 11903.0 11229.0 31636.0 8856.0 1515.0 2617.0 3502.0 34745.0 2539.0 648.0 568.0 1321.0 2352.0 11403.0 14160.0 0 0

MA1573.1_rc_shift6 (THAP11_rc)
; dyads_m34 versus MA1573.1_rc (THAP11_rc); m=15/16; ncol2=19; w=10; offset=-1; strand=R; shift=6; score=0.446232; ------tkCTGGGAawTGT ; cor=; Ncor= a 0 0 0 0 0 0 35.0 25.0 29.0 5.0 4.0 1.0 6.0 426.0 265.0 214.0 7.0 3.0 14.0 c 0 0 0 0 0 0 85.0 89.0 365.0 58.0 2.0 1.0 1.0 5.0 47.0 33.0 34.0 1.0 10.0 g 0 0 0 0 0 0 84.0 184.0 23.0 5.0 443.0 448.0 440.0 17.0 107.0 39.0 8.0 446.0 16.0 t 0 0 0 0 0 0 247.0 153.0 34.0 383.0 2.0 1.0 4.0 3.0 32.0 165.0 402.0 1.0 411.0

MA1597.1_shift6 (ZNF528)
; dyads_m34 versus MA1597.1 (ZNF528); m=16/16; ncol2=17; w=10; offset=-1; strand=D; shift=6; score=0.427038; ------cccAGGGAAGcCA ; cor=; Ncor= a 0 0 0 0 0 0 84.0 69.0 100.0 524.0 32.0 7.0 22.0 608.0 579.0 5.0 35.0 15.0 606.0 c 0 0 0 0 0 0 380.0 367.0 404.0 12.0 3.0 5.0 2.0 3.0 4.0 1.0 414.0 590.0 2.0 g 0 0 0 0 0 0 66.0 87.0 64.0 61.0 573.0 598.0 590.0 3.0 26.0 608.0 54.0 3.0 7.0 t 0 0 0 0 0 0 86.0 93.0 48.0 19.0 8.0 6.0 2.0 2.0 7.0 2.0 113.0 8.0 1.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m34_shift7 (dyads_m34dyads_m34)				; dyads_m34 (dyads_m34dyads_m34); m=0 (reference); ncol1=10; shift=7; ncol=19; -------gsTGGGAAgs-- ; Alignment reference a 0 0 0 0 0 0 0 1168 958 0 0 0 0 6763 6763 1508 1598 0 0 c 0 0 0 0 0 0 0 1672 2977 0 3 0 0 0 0 1576 1717 0 0 g 0 0 0 0 0 0 0 2294 1830 0 6760 6763 6763 0 0 2594 2185 0 0 t 0 0 0 0 0 0 0 1629 998 6763 0 0 0 0 0 1085 1263 0 0
MA1116.1_shift7 (RBPJ)				; dyads_m34 versus MA1116.1 (RBPJ); m=1/16; ncol2=10; w=10; offset=0; strand=D; shift=7; score=0.992585; -------bsTGGGAAmg-- ; cor=; Ncor= a 0 0 0 0 0 0 0 345.0 489.0 2.0 35.0 9.0 7.0 2369.0 2382.0 742.0 565.0 0 0 c 0 0 0 0 0 0 0 842.0 872.0 12.0 25.0 20.0 8.0 0.0 15.0 655.0 579.0 0 0 g 0 0 0 0 0 0 0 604.0 787.0 2.0 2341.0 2313.0 2309.0 4.0 1.0 592.0 711.0 0 0 t 0 0 0 0 0 0 0 611.0 254.0 2386.0 1.0 60.0 78.0 29.0 4.0 413.0 547.0 0 0
MA0606.1_rc_shift7 (NFAT5_rc)				; dyads_m34 versus MA0606.1_rc (NFAT5_rc); m=2/16; ncol2=10; w=10; offset=0; strand=R; shift=7; score=0.724761; -------wrTGGAAAat-- ; cor=; Ncor= a 0 0 0 0 0 0 0 322.0 548.0 85.0 89.0 85.0 827.0 1000.0 1000.0 649.0 210.0 0 0 c 0 0 0 0 0 0 0 248.0 41.0 0.0 85.0 0.0 0.0 0.0 0.0 88.0 210.0 0 0 g 0 0 0 0 0 0 0 163.0 287.0 84.0 826.0 915.0 84.0 0.0 0.0 88.0 210.0 0 0 t 0 0 0 0 0 0 0 268.0 124.0 831.0 0.0 0.0 89.0 0.0 0.0 176.0 371.0 0 0
MA0519.1_rc_shift6 (Stat5a::Stat5b_rc)				; dyads_m34 versus MA0519.1_rc (Stat5a::Stat5b_rc); m=3/16; ncol2=11; w=10; offset=-1; strand=R; shift=6; score=0.695262; ------TTCYkGGAAay-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0 1526.0 0.0 824.0 3326.0 3449.0 166.0 14907.0 16507.0 7937.0 3584.0 0 0 c 0 0 0 0 0 0 1621.0 0.0 16507.0 4140.0 0.0 0.0 0.0 0.0 0.0 2901.0 4425.0 0 0 g 0 0 0 0 0 0 0.0 93.0 0.0 0.0 6137.0 12795.0 16341.0 1600.0 0.0 3596.0 2326.0 0 0 t 0 0 0 0 0 0 14886.0 14888.0 0.0 11543.0 7044.0 263.0 0.0 0.0 0.0 2073.0 6172.0 0 0
MA1601.1_shift6 (ZNF75D)				; dyads_m34 versus MA1601.1 (ZNF75D); m=4/16; ncol2=10; w=9; offset=-1; strand=D; shift=6; score=0.688225; ------rtGTGGGArA--- ; cor=; Ncor= a 0 0 0 0 0 0 2111.0 1057.0 2.0 10.0 26.0 46.0 24.0 6706.0 4094.0 5245.0 0 0 0 c 0 0 0 0 0 0 1573.0 715.0 0.0 59.0 18.0 44.0 29.0 20.0 576.0 256.0 0 0 0 g 0 0 0 0 0 0 1850.0 1468.0 6757.0 4.0 6710.0 6545.0 6678.0 15.0 1693.0 746.0 0 0 0 t 0 0 0 0 0 0 1225.0 3519.0 0.0 6686.0 5.0 124.0 28.0 18.0 396.0 512.0 0 0 0
MA1122.1_shift6 (TFDP1)				; dyads_m34 versus MA1122.1 (TFDP1); m=5/16; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.648329; ------gsGCGGGAAss-- ; cor=; Ncor= a 0 0 0 0 0 0 411.0 263.0 48.0 28.0 14.0 36.0 27.0 1855.0 1645.0 465.0 381.0 0 0 c 0 0 0 0 0 0 491.0 684.0 71.0 1886.0 54.0 80.0 32.0 24.0 170.0 647.0 604.0 0 0 g 0 0 0 0 0 0 777.0 940.0 1862.0 22.0 1932.0 1865.0 1919.0 98.0 137.0 648.0 648.0 0 0 t 0 0 0 0 0 0 328.0 120.0 26.0 71.0 7.0 26.0 29.0 30.0 55.0 247.0 374.0 0 0
MA0144.2_shift5 (STAT3)				; dyads_m34 versus MA0144.2 (STAT3); m=6/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.632226; -----yTKCykGGAAr--- ; cor=; Ncor= a 0 0 0 0 0 1936.0 708.0 250.0 1006.0 840.0 3692.0 1574.0 2532.0 21620.0 21620.0 9311.0 0 0 0 c 0 0 0 0 0 8571.0 0.0 346.0 19585.0 7780.0 0.0 0.0 0.0 0.0 0.0 962.0 0 0 0 g 0 0 0 0 0 3801.0 0.0 5850.0 0.0 0.0 11456.0 20046.0 18686.0 0.0 0.0 6579.0 0 0 0 t 0 0 0 0 0 7312.0 20912.0 15174.0 1029.0 13000.0 6472.0 0.0 402.0 0.0 0.0 4768.0 0 0 0
MA1625.1_rc_shift3 (Stat5b_rc)				; dyads_m34 versus MA1625.1_rc (Stat5b_rc); m=7/16; ncol2=15; w=10; offset=-4; strand=R; shift=3; score=0.562618; ---sayTTCTgGGAAwtr- ; cor=; Ncor= a 0 0 0 600.0 852.0 533.0 21.0 85.0 17.0 76.0 425.0 467.0 39.0 2600.0 2604.0 916.0 629.0 702.0 0 c 0 0 0 729.0 542.0 711.0 50.0 86.0 2717.0 150.0 127.0 43.0 23.0 34.0 51.0 537.0 647.0 682.0 0 g 0 0 0 768.0 680.0 615.0 25.0 35.0 16.0 60.0 1746.0 2176.0 2666.0 34.0 54.0 607.0 576.0 762.0 0 t 0 0 0 663.0 686.0 901.0 2664.0 2554.0 10.0 2474.0 462.0 74.0 32.0 92.0 51.0 700.0 908.0 614.0 0
MA0137.3_shift5 (STAT1)				; dyads_m34 versus MA0137.3 (STAT1); m=8/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.557385; -----tTTCyrGGAAa--- ; cor=; Ncor= a 0 0 0 0 0 366.0 0.0 0.0 361.0 109.0 1739.0 163.0 29.0 3620.0 3624.0 1879.0 0 0 0 c 0 0 0 0 0 731.0 52.0 6.0 3262.0 2009.0 0.0 0.0 7.0 0.0 5.0 311.0 0 0 0 g 0 0 0 0 0 785.0 0.0 110.0 6.0 0.0 1637.0 3466.0 3426.0 9.0 0.0 725.0 0 0 0 t 0 0 0 0 0 1747.0 3577.0 3513.0 0.0 1511.0 253.0 0.0 167.0 0.0 0.0 714.0 0 0 0
MA0471.2_shift4 (E2F6)				; dyads_m34 versus MA0471.2 (E2F6); m=9/16; ncol2=13; w=10; offset=-3; strand=D; shift=4; score=0.539487; ----grrGGCGGGAArs-- ; cor=; Ncor= a 0 0 0 0 7296.0 8379.0 9537.0 2110.0 266.0 3856.0 1173.0 338.0 354.0 29337.0 25725.0 8995.0 7616.0 0 0 c 0 0 0 0 8075.0 7405.0 5102.0 1148.0 837.0 26424.0 539.0 434.0 834.0 1171.0 1595.0 7410.0 8477.0 0 0 g 0 0 0 0 12358.0 11649.0 11562.0 29387.0 31790.0 693.0 30573.0 31973.0 31614.0 2322.0 5021.0 12530.0 11405.0 0 0 t 0 0 0 0 5369.0 5665.0 6897.0 453.0 205.0 2125.0 813.0 353.0 296.0 268.0 757.0 4163.0 5600.0 0 0
MA0518.1_shift5 (Stat4)				; dyads_m34 versus MA0518.1 (Stat4); m=10/16; ncol2=14; w=10; offset=-2; strand=D; shift=5; score=0.528507; -----yTTCyrRGAArysr ; cor=; Ncor= a 0 0 0 0 0 211.0 12.0 26.0 632.0 307.0 1450.0 733.0 45.0 2873.0 2873.0 1573.0 486.0 632.0 889.0 c 0 0 0 0 0 1019.0 2.0 0.0 2229.0 1491.0 28.0 0.0 0.0 0.0 0.0 279.0 785.0 721.0 443.0 g 0 0 0 0 0 484.0 0.0 529.0 12.0 72.0 1223.0 2134.0 2828.0 0.0 0.0 833.0 685.0 1028.0 1117.0 t 0 0 0 0 0 1159.0 2859.0 2318.0 0.0 1003.0 172.0 6.0 0.0 0.0 0.0 188.0 917.0 492.0 424.0
MA0152.1_rc_shift10 (NFATC2_rc)				; dyads_m34 versus MA0152.1_rc (NFATC2_rc); m=11/16; ncol2=7; w=7; offset=3; strand=R; shift=10; score=0.500042; ----------TGGAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.0 0.0 0.0 26.0 24.0 21.0 20.0 0 0 c 0 0 0 0 0 0 0 0 0 0 1.0 0.0 0.0 0.0 0.0 2.0 2.0 0 0 g 0 0 0 0 0 0 0 0 0 0 3.0 26.0 25.0 0.0 1.0 2.0 1.0 0 0 t 0 0 0 0 0 0 0 0 0 0 18.0 0.0 1.0 0.0 1.0 1.0 3.0 0 0
MA1624.1_rc_shift4 (Stat5a_rc)				; dyads_m34 versus MA1624.1_rc (Stat5a_rc); m=12/16; ncol2=12; w=9; offset=-3; strand=R; shift=4; score=0.486667; ----dtTTCTTGGAAw--- ; cor=; Ncor= a 0 0 0 0 1450.0 1066.0 73.0 87.0 32.0 103.0 598.0 369.0 41.0 4130.0 3621.0 1331.0 0 0 0 c 0 0 0 0 687.0 988.0 101.0 49.0 4441.0 980.0 137.0 28.0 26.0 144.0 207.0 1004.0 0 0 0 g 0 0 0 0 1217.0 1028.0 66.0 41.0 22.0 80.0 588.0 4046.0 4381.0 89.0 372.0 851.0 0 0 0 t 0 0 0 0 1160.0 1432.0 4274.0 4337.0 19.0 3351.0 3191.0 71.0 66.0 151.0 314.0 1328.0 0 0 0
MA1154.1_rc_shift0 (ZNF282_rc)				; dyads_m34 versus MA1154.1_rc (ZNF282_rc); m=13/16; ncol2=17; w=10; offset=-7; strand=R; shift=0; score=0.47964; stmGTGTTrkGGGAAAg-- ; cor=; Ncor= a 51.0 43.0 129.0 2.0 7.0 3.0 2.0 61.0 126.0 21.0 2.0 1.0 0.0 380.0 387.0 378.0 45.0 0 0 c 97.0 60.0 297.0 2.0 2.0 4.0 0.0 37.0 2.0 0.0 3.0 0.0 2.0 3.0 8.0 7.0 50.0 0 0 g 98.0 40.0 0.0 210.0 44.0 210.0 0.0 3.0 132.0 99.0 205.0 208.0 209.0 2.0 0.0 21.0 196.0 0 0 t 44.0 157.0 14.0 1.0 242.0 2.0 277.0 256.0 12.0 140.0 0.0 0.0 0.0 3.0 16.0 39.0 21.0 0 0
MA0154.4_rc_shift2 (EBF1_rc)				; dyads_m34 versus MA0154.4_rc (EBF1_rc); m=14/16; ncol2=15; w=10; offset=-5; strand=R; shift=2; score=0.478147; --wgTCCCCTGGGGAyw-- ; cor=; Ncor= a 0 0 13513.0 11042.0 2477.0 1346.0 666.0 662.0 2381.0 7250.0 2349.0 1772.0 1230.0 7519.0 33070.0 10987.0 11506.0 0 0 c 0 0 9173.0 9855.0 4957.0 32761.0 42789.0 41651.0 38728.0 1723.0 862.0 443.0 371.0 1920.0 5497.0 13481.0 10891.0 0 0 g 0 0 10836.0 13299.0 6355.0 2462.0 455.0 495.0 814.0 1707.0 39675.0 42562.0 43256.0 34665.0 4506.0 9554.0 8868.0 0 0 t 0 0 11903.0 11229.0 31636.0 8856.0 1515.0 2617.0 3502.0 34745.0 2539.0 648.0 568.0 1321.0 2352.0 11403.0 14160.0 0 0
MA1573.1_rc_shift6 (THAP11_rc)				; dyads_m34 versus MA1573.1_rc (THAP11_rc); m=15/16; ncol2=19; w=10; offset=-1; strand=R; shift=6; score=0.446232; ------tkCTGGGAawTGT ; cor=; Ncor= a 0 0 0 0 0 0 35.0 25.0 29.0 5.0 4.0 1.0 6.0 426.0 265.0 214.0 7.0 3.0 14.0 c 0 0 0 0 0 0 85.0 89.0 365.0 58.0 2.0 1.0 1.0 5.0 47.0 33.0 34.0 1.0 10.0 g 0 0 0 0 0 0 84.0 184.0 23.0 5.0 443.0 448.0 440.0 17.0 107.0 39.0 8.0 446.0 16.0 t 0 0 0 0 0 0 247.0 153.0 34.0 383.0 2.0 1.0 4.0 3.0 32.0 165.0 402.0 1.0 411.0
MA1597.1_shift6 (ZNF528)				; dyads_m34 versus MA1597.1 (ZNF528); m=16/16; ncol2=17; w=10; offset=-1; strand=D; shift=6; score=0.427038; ------cccAGGGAAGcCA ; cor=; Ncor= a 0 0 0 0 0 0 84.0 69.0 100.0 524.0 32.0 7.0 22.0 608.0 579.0 5.0 35.0 15.0 606.0 c 0 0 0 0 0 0 380.0 367.0 404.0 12.0 3.0 5.0 2.0 3.0 4.0 1.0 414.0 590.0 2.0 g 0 0 0 0 0 0 66.0 87.0 64.0 61.0 573.0 598.0 590.0 3.0 26.0 608.0 54.0 3.0 7.0 t 0 0 0 0 0 0 86.0 93.0 48.0 19.0 8.0 6.0 2.0 2.0 7.0 2.0 113.0 8.0 1.0