One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_6nt_mkv4_m14/peak-motifs_oligos_6nt_mkv4_m14.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_6nt_mkv4_m14/peak-motifs_oligos_6nt_mkv4_m14_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m14_shift8 ; 37 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_6nt_mkv4_m14_shift8 (oligos_6nt_mkv4_m14oligos_6nt_mkv4_m14)     
; oligos_6nt_mkv4_m14 (oligos_6nt_mkv4_m14oligos_6nt_mkv4_m14); m=0 (reference); ncol1=13; shift=8; ncol=21; --------ssCTGACCTCAsc
; Alignment reference
a	0	0	0	0	0	0	0	0	521	483	136	143	50	2361	92	128	188	34	2320	369	577
c	0	0	0	0	0	0	0	0	796	749	2144	29	123	40	2317	2148	96	2398	92	786	883
g	0	0	0	0	0	0	0	0	673	704	179	30	2314	40	55	168	82	68	63	821	570
t	0	0	0	0	0	0	0	0	540	594	71	2328	43	89	66	86	2164	30	55	554	500
MA1632.1_rc_shift9 (ATF2_rc) 
; oligos_6nt_mkv4_m14 versus MA1632.1_rc (ATF2_rc); m=1/36; ncol2=13; w=12; offset=1; strand=R; shift=9; score=0.710811; ---------raTGACvTCATy
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	18336.0	36321.0	509.0	909.0	57832.0	261.0	18166.0	975.0	2498.0	57651.0	1438.0	11021.0
c	0	0	0	0	0	0	0	0	0	11553.0	5971.0	768.0	649.0	283.0	56882.0	23207.0	262.0	55318.0	328.0	6229.0	18924.0
g	0	0	0	0	0	0	0	0	0	15785.0	14153.0	218.0	53464.0	316.0	886.0	16970.0	396.0	408.0	899.0	3145.0	10292.0
t	0	0	0	0	0	0	0	0	0	13720.0	2949.0	57899.0	4372.0	963.0	1365.0	1051.0	57761.0	1170.0	516.0	48582.0	19157.0
MA0018.4_rc_shift9 (CREB1_rc) 
; oligos_6nt_mkv4_m14 versus MA0018.4_rc (CREB1_rc); m=2/36; ncol2=13; w=12; offset=1; strand=R; shift=9; score=0.701718; ---------drTGACATCAyh
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	21630.0	32873.0	1485.0	1852.0	68217.0	1831.0	56875.0	2279.0	2963.0	75554.0	10149.0	22306.0
c	0	0	0	0	0	0	0	0	0	13550.0	14802.0	1222.0	2177.0	1207.0	74401.0	6339.0	2012.0	72555.0	1109.0	27796.0	21104.0
g	0	0	0	0	0	0	0	0	0	21876.0	21582.0	1018.0	71982.0	1231.0	1895.0	14144.0	1748.0	2298.0	970.0	13032.0	15046.0
t	0	0	0	0	0	0	0	0	0	22488.0	10287.0	75819.0	3533.0	8889.0	1417.0	2186.0	73505.0	1728.0	1911.0	28567.0	21088.0
MA0605.2_shift9 (ATF3) 
; oligos_6nt_mkv4_m14 versus MA0605.2 (ATF3); m=3/36; ncol2=12; w=12; offset=1; strand=D; shift=9; score=0.688746; ---------grTGACGTCAyc
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	8505.0	24741.0	0.0	0.0	40546.0	0.0	891.0	0.0	1520.0	40546.0	0.0	6919.0
c	0	0	0	0	0	0	0	0	0	8220.0	1354.0	0.0	0.0	0.0	40546.0	0.0	0.0	40546.0	0.0	15737.0	16820.0
g	0	0	0	0	0	0	0	0	0	16894.0	15805.0	1.0	40546.0	0.0	0.0	40546.0	0.0	0.0	0.0	1094.0	8242.0
t	0	0	0	0	0	0	0	0	0	6926.0	0.0	40546.0	1366.0	0.0	556.0	0.0	40546.0	0.0	0.0	24808.0	8564.0
MA1475.1_rc_shift9 (CREB3L4(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1475.1_rc (CREB3L4(var.2)_rc); m=4/36; ncol2=12; w=12; offset=1; strand=R; shift=9; score=0.681172; ---------grTGACGTCAyc
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	212.0	546.0	40.0	59.0	1293.0	0.0	43.0	39.0	258.0	1293.0	75.0	270.0
c	0	0	0	0	0	0	0	0	0	265.0	282.0	153.0	227.0	36.0	1293.0	6.0	83.0	1293.0	48.0	790.0	570.0
g	0	0	0	0	0	0	0	0	0	582.0	748.0	35.0	1293.0	100.0	3.0	1293.0	27.0	265.0	138.0	221.0	224.0
t	0	0	0	0	0	0	0	0	0	234.0	116.0	1293.0	176.0	16.0	81.0	0.0	1293.0	35.0	0.0	504.0	229.0
MA1133.1_rc_shift9 (JUN::JUNB(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1133.1_rc (JUN::JUNB(var.2)_rc); m=5/36; ncol2=12; w=12; offset=1; strand=R; shift=9; score=0.675743; ---------vATGACGTCAym
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	278.0	712.0	26.0	40.0	903.0	42.0	68.0	129.0	218.0	875.0	30.0	457.0
c	0	0	0	0	0	0	0	0	0	255.0	130.0	35.0	35.0	40.0	867.0	47.0	63.0	703.0	25.0	486.0	358.0
g	0	0	0	0	0	0	0	0	0	254.0	125.0	19.0	834.0	27.0	36.0	862.0	22.0	28.0	43.0	108.0	132.0
t	0	0	0	0	0	0	0	0	0	212.0	33.0	919.0	91.0	30.0	55.0	23.0	787.0	51.0	58.0	376.0	54.0
MA1139.1_rc_shift9 (FOSL2::JUNB(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1139.1_rc (FOSL2::JUNB(var.2)_rc); m=6/36; ncol2=12; w=12; offset=1; strand=R; shift=9; score=0.671779; ---------krTGACGTCAym
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	228.0	639.0	8.0	13.0	972.0	10.0	74.0	10.0	187.0	969.0	29.0	263.0
c	0	0	0	0	0	0	0	0	0	151.0	67.0	19.0	23.0	6.0	900.0	17.0	13.0	780.0	6.0	268.0	359.0
g	0	0	0	0	0	0	0	0	0	358.0	266.0	5.0	778.0	12.0	16.0	899.0	5.0	21.0	17.0	65.0	150.0
t	0	0	0	0	0	0	0	0	0	263.0	28.0	968.0	186.0	10.0	74.0	10.0	972.0	12.0	8.0	638.0	227.0
MA0656.1_shift9 (JDP2(var.2)) 
; oligos_6nt_mkv4_m14 versus MA0656.1 (JDP2(var.2)); m=7/36; ncol2=12; w=12; offset=1; strand=D; shift=9; score=0.671766; ---------gATGACGTCAyc
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	4260.0	24403.0	3.0	11.0	24403.0	5.0	587.0	15.0	1777.0	24403.0	47.0	4383.0
c	0	0	0	0	0	0	0	0	0	5483.0	1319.0	9.0	0.0	7.0	24403.0	5.0	24.0	24403.0	10.0	12119.0	12117.0
g	0	0	0	0	0	0	0	0	0	11036.0	1403.0	3.0	24403.0	6.0	6.0	24403.0	7.0	4.0	9.0	835.0	4124.0
t	0	0	0	0	0	0	0	0	0	3623.0	17.0	24403.0	1939.0	6.0	338.0	2.0	24403.0	1.0	0.0	12283.0	3778.0
MA0834.1_shift8 (ATF7) 
; oligos_6nt_mkv4_m14 versus MA0834.1 (ATF7); m=8/36; ncol2=14; w=13; offset=0; strand=D; shift=8; score=0.661116; --------crATGACGTCAYm
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	3922.0	5130.0	19329.0	11.0	26.0	19329.0	20.0	79.0	25.0	2698.0	19329.0	82.0	5628.0
c	0	0	0	0	0	0	0	0	6606.0	2440.0	368.0	4.0	7.0	8.0	19329.0	9.0	16.0	19329.0	2.0	7305.0	8116.0
g	0	0	0	0	0	0	0	0	4161.0	7299.0	3772.0	43.0	19329.0	58.0	33.0	19329.0	77.0	51.0	49.0	440.0	2129.0
t	0	0	0	0	0	0	0	0	4641.0	4461.0	41.0	19329.0	1759.0	12.0	68.0	4.0	19329.0	22.0	11.0	19329.0	3456.0
MA1140.2_shift9 (JUNB(var.2)) 
; oligos_6nt_mkv4_m14 versus MA1140.2 (JUNB(var.2)); m=9/36; ncol2=12; w=12; offset=1; strand=D; shift=9; score=0.65756; ---------gATGACGTCAyc
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	50.0	305.0	1.0	0.0	305.0	0.0	0.0	1.0	17.0	305.0	0.0	40.0
c	0	0	0	0	0	0	0	0	0	46.0	7.0	1.0	0.0	1.0	305.0	1.0	3.0	305.0	2.0	114.0	187.0
g	0	0	0	0	0	0	0	0	0	162.0	15.0	4.0	305.0	1.0	0.0	305.0	1.0	3.0	1.0	10.0	43.0
t	0	0	0	0	0	0	0	0	0	47.0	6.0	305.0	13.0	0.0	2.0	0.0	305.0	1.0	1.0	191.0	35.0
MA0840.1_shift9 (Creb5) 
; oligos_6nt_mkv4_m14 versus MA0840.1 (Creb5); m=10/36; ncol2=12; w=12; offset=1; strand=D; shift=9; score=0.655288; ---------rATGACGTCAyy
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	1202.0	3704.0	6.0	13.0	3704.0	0.0	151.0	18.0	917.0	3704.0	25.0	740.0
c	0	0	0	0	0	0	0	0	0	740.0	227.0	16.0	6.0	0.0	3704.0	0.0	6.0	3704.0	0.0	1861.0	1466.0
g	0	0	0	0	0	0	0	0	0	1066.0	256.0	0.0	3704.0	1.0	0.0	3704.0	0.0	0.0	0.0	77.0	372.0
t	0	0	0	0	0	0	0	0	0	695.0	40.0	3704.0	918.0	10.0	57.0	0.0	3704.0	4.0	2.0	1843.0	1126.0
MA0017.2_rc_shift7 (NR2F1_rc) 
; oligos_6nt_mkv4_m14 versus MA0017.2_rc (NR2F1_rc); m=11/36; ncol2=13; w=12; offset=-1; strand=R; shift=7; score=0.641897; -------CyykTGACCYytg-
; cor=; Ncor=
a	0	0	0	0	0	0	0	3466.0	2427.0	1469.0	2270.0	0.0	0.0	12059.0	0.0	0.0	0.0	469.0	1948.0	3980.0	0
c	0	0	0	0	0	0	0	36863.0	3886.0	4395.0	1618.0	91.0	0.0	0.0	12059.0	12059.0	3791.0	4869.0	1153.0	3276.0	0
g	0	0	0	0	0	0	0	2912.0	2470.0	2966.0	3055.0	0.0	12059.0	0.0	0.0	30.0	0.0	387.0	1692.0	11446.0	0
t	0	0	0	0	0	0	0	5681.0	3276.0	3229.0	5116.0	12059.0	0.0	0.0	0.0	0.0	8496.0	6333.0	7266.0	4802.0	0
MA1145.1_shift8 (FOSL2::JUND(var.2)) 
; oligos_6nt_mkv4_m14 versus MA1145.1 (FOSL2::JUND(var.2)); m=12/36; ncol2=15; w=13; offset=0; strand=D; shift=8; score=0.638834; --------kkrTkACGTCAyc
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	198.0	219.0	559.0	26.0	7.0	943.0	12.0	135.0	28.0	33.0	972.0	23.0	217.0
c	0	0	0	0	0	0	0	0	177.0	189.0	45.0	27.0	46.0	6.0	911.0	15.0	12.0	942.0	6.0	345.0	434.0
g	0	0	0	0	0	0	0	0	286.0	340.0	340.0	10.0	678.0	31.0	35.0	823.0	10.0	15.0	11.0	55.0	104.0
t	0	0	0	0	0	0	0	0	339.0	252.0	57.0	937.0	268.0	20.0	41.0	28.0	950.0	11.0	11.0	577.0	245.0
MA1131.1_rc_shift10 (FOSL2::JUN(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1131.1_rc (FOSL2::JUN(var.2)_rc); m=13/36; ncol2=11; w=11; offset=2; strand=R; shift=10; score=0.621797; ----------aTkACGTCAyc
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	578.0	15.0	8.0	908.0	17.0	61.0	23.0	62.0	978.0	15.0	224.0
c	0	0	0	0	0	0	0	0	0	0	166.0	13.0	16.0	9.0	845.0	22.0	9.0	917.0	8.0	323.0	459.0
g	0	0	0	0	0	0	0	0	0	0	218.0	10.0	625.0	70.0	45.0	906.0	6.0	14.0	8.0	30.0	94.0
t	0	0	0	0	0	0	0	0	0	0	38.0	961.0	351.0	14.0	92.0	11.0	963.0	7.0	6.0	633.0	222.0
MA0609.2_shift7 (CREM) 
; oligos_6nt_mkv4_m14 versus MA0609.2 (CREM); m=14/36; ncol2=16; w=13; offset=-1; strand=D; shift=7; score=0.618501; -------gcrgTGACGTCAcy
; cor=; Ncor=
a	0	0	0	0	0	0	0	3865.0	3966.0	5881.0	2936.0	559.0	434.0	15694.0	517.0	1582.0	400.0	672.0	15228.0	789.0	3757.0
c	0	0	0	0	0	0	0	4230.0	5521.0	2908.0	2159.0	730.0	1038.0	313.0	14031.0	901.0	622.0	14883.0	508.0	11146.0	4473.0
g	0	0	0	0	0	0	0	5132.0	3956.0	4474.0	11144.0	506.0	14883.0	619.0	897.0	14026.0	314.0	1039.0	730.0	2156.0	2910.0
t	0	0	0	0	0	0	0	3800.0	3584.0	3764.0	788.0	15232.0	672.0	401.0	1582.0	518.0	15691.0	433.0	561.0	2936.0	5887.0
MA1127.1_rc_shift10 (FOSB::JUN_rc) 
; oligos_6nt_mkv4_m14 versus MA1127.1_rc (FOSB::JUN_rc); m=15/36; ncol2=11; w=11; offset=2; strand=R; shift=10; score=0.613957; ----------rTGACGTCAtc
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	593.0	21.0	36.0	904.0	14.0	42.0	20.0	100.0	965.0	48.0	162.0
c	0	0	0	0	0	0	0	0	0	0	53.0	14.0	20.0	14.0	897.0	25.0	17.0	872.0	12.0	216.0	575.0
g	0	0	0	0	0	0	0	0	0	0	261.0	16.0	697.0	57.0	14.0	886.0	8.0	10.0	10.0	87.0	70.0
t	0	0	0	0	0	0	0	0	0	0	92.0	949.0	247.0	25.0	75.0	48.0	954.0	17.0	12.0	649.0	193.0
MA1111.1_rc_shift9 (NR2F2_rc) 
; oligos_6nt_mkv4_m14 versus MA1111.1_rc (NR2F2_rc); m=16/36; ncol2=11; w=11; offset=1; strand=R; shift=9; score=0.601708; ---------ytTGACCTTtr-
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	401.0	524.0	34.0	170.0	2135.0	27.0	43.0	23.0	206.0	401.0	606.0	0
c	0	0	0	0	0	0	0	0	0	572.0	544.0	43.0	26.0	30.0	2132.0	2108.0	82.0	173.0	320.0	418.0	0
g	0	0	0	0	0	0	0	0	0	384.0	503.0	16.0	1978.0	22.0	12.0	16.0	15.0	37.0	456.0	692.0	0
t	0	0	0	0	0	0	0	0	0	847.0	633.0	2111.0	30.0	17.0	33.0	37.0	2084.0	1788.0	1027.0	488.0	0
MA0684.2_shift10 (RUNX3) 
; oligos_6nt_mkv4_m14 versus MA0684.2 (RUNX3); m=17/36; ncol2=12; w=11; offset=2; strand=D; shift=10; score=0.580046; ----------awAACCTCAaw
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	7768.0	9558.0	19136.0	26243.0	427.0	495.0	6357.0	611.0	26121.0	16137.0	8778.0
c	0	0	0	0	0	0	0	0	0	0	6083.0	5007.0	2662.0	315.0	26293.0	26208.0	419.0	26015.0	414.0	3077.0	5994.0
g	0	0	0	0	0	0	0	0	0	0	6685.0	3547.0	3500.0	431.0	198.0	385.0	1911.0	390.0	338.0	4696.0	5642.0
t	0	0	0	0	0	0	0	0	0	0	6841.0	9265.0	2079.0	388.0	459.0	289.0	18690.0	361.0	504.0	3467.0	6963.0
MA0492.1_rc_shift9 (JUND(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA0492.1_rc (JUND(var.2)_rc); m=18/36; ncol2=15; w=12; offset=1; strand=R; shift=9; score=0.575866; ---------kATKACrTCATy
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	6184.0	25487.0	0.0	0.0	29696.0	0.0	14938.0	0.0	120.0	33631.0	0.0	1802.0
c	0	0	0	0	0	0	0	0	0	6351.0	2407.0	0.0	141.0	0.0	26683.0	8287.0	0.0	33511.0	0.0	8115.0	15761.0
g	0	0	0	0	0	0	0	0	0	10841.0	5470.0	0.0	24697.0	3935.0	1824.0	10406.0	0.0	0.0	0.0	169.0	2452.0
t	0	0	0	0	0	0	0	0	0	10255.0	267.0	33631.0	8793.0	0.0	5124.0	0.0	33631.0	0.0	0.0	25347.0	13616.0
MA0071.1_rc_shift11 (RORA_rc) 
; oligos_6nt_mkv4_m14 versus MA0071.1_rc (RORA_rc); m=19/36; ncol2=10; w=10; offset=3; strand=R; shift=11; score=0.567341; -----------TGACCTwgww
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	0	0.0	0.0	25.0	0.0	0.0	0.0	7.0	3.0	15.0	7.0
c	0	0	0	0	0	0	0	0	0	0	0	0.0	0.0	0.0	25.0	25.0	4.0	5.0	4.0	0.0	2.0
g	0	0	0	0	0	0	0	0	0	0	0	0.0	25.0	0.0	0.0	0.0	0.0	2.0	12.0	1.0	1.0
t	0	0	0	0	0	0	0	0	0	0	0	25.0	0.0	0.0	0.0	0.0	21.0	11.0	6.0	9.0	15.0
MA1136.1_rc_shift10 (FOSB::JUNB(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1136.1_rc (FOSB::JUNB(var.2)_rc); m=20/36; ncol2=10; w=10; offset=2; strand=R; shift=10; score=0.55239; ----------rTGACGTCAy-
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	664.0	31.0	15.0	836.0	20.0	101.0	28.0	242.0	917.0	12.0	0
c	0	0	0	0	0	0	0	0	0	0	65.0	30.0	36.0	28.0	893.0	27.0	60.0	700.0	16.0	368.0	0
g	0	0	0	0	0	0	0	0	0	0	260.0	16.0	776.0	80.0	35.0	842.0	44.0	46.0	36.0	59.0	0
t	0	0	0	0	0	0	0	0	0	0	11.0	923.0	173.0	56.0	52.0	30.0	869.0	13.0	30.0	561.0	0
MA0488.1_rc_shift10 (JUN_rc) 
; oligos_6nt_mkv4_m14 versus MA0488.1_rc (JUN_rc); m=21/36; ncol2=13; w=11; offset=2; strand=R; shift=10; score=0.54977; ----------ATkACaTCATy
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	16045.0	0.0	0.0	16499.0	0.0	13018.0	1.0	119.0	20968.0	0.0	2887.0
c	0	0	0	0	0	0	0	0	0	0	1016.0	0.0	0.0	0.0	20360.0	4512.0	0.0	20849.0	0.0	3713.0	9682.0
g	0	0	0	0	0	0	0	0	0	0	3704.0	0.0	14064.0	3531.0	608.0	3438.0	0.0	0.0	0.0	729.0	1903.0
t	0	0	0	0	0	0	0	0	0	0	203.0	20968.0	6904.0	938.0	0.0	0.0	20967.0	0.0	0.0	16526.0	6496.0
MA1535.1_rc_shift10 (NR2C1_rc) 
; oligos_6nt_mkv4_m14 versus MA1535.1_rc (NR2C1_rc); m=22/36; ncol2=9; w=9; offset=2; strand=R; shift=10; score=0.547357; ----------rTGACCyyk--
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	2499.0	0.0	0.0	9622.0	0.0	297.0	55.0	1316.0	2225.0	0	0
c	0	0	0	0	0	0	0	0	0	0	2039.0	1716.0	321.0	271.0	9622.0	9622.0	4756.0	5587.0	1997.0	0	0
g	0	0	0	0	0	0	0	0	0	0	2786.0	0.0	9622.0	0.0	0.0	0.0	227.0	1225.0	2848.0	0	0
t	0	0	0	0	0	0	0	0	0	0	2298.0	9622.0	0.0	0.0	0.0	0.0	4866.0	4035.0	2552.0	0	0
MA1129.1_rc_shift10 (FOSL1::JUN(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1129.1_rc (FOSL1::JUN(var.2)_rc); m=23/36; ncol2=10; w=10; offset=2; strand=R; shift=10; score=0.538672; ----------rTgACGTcAy-
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	641.0	30.0	35.0	827.0	24.0	95.0	43.0	240.0	919.0	26.0	0
c	0	0	0	0	0	0	0	0	0	0	71.0	31.0	58.0	27.0	847.0	38.0	106.0	672.0	24.0	266.0	0
g	0	0	0	0	0	0	0	0	0	0	264.0	22.0	670.0	105.0	36.0	845.0	26.0	56.0	30.0	69.0	0
t	0	0	0	0	0	0	0	0	0	0	24.0	917.0	238.0	41.0	93.0	22.0	825.0	33.0	28.0	639.0	0
MA1126.1_shift9 (FOS::JUN(var.2)) 
; oligos_6nt_mkv4_m14 versus MA1126.1 (FOS::JUN(var.2)); m=24/36; ncol2=16; w=12; offset=1; strand=D; shift=9; score=0.511927; ---------drTgACGTCAtm
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	266.0	556.0	47.0	42.0	748.0	80.0	131.0	40.0	53.0	907.0	30.0	299.0
c	0	0	0	0	0	0	0	0	0	63.0	45.0	74.0	112.0	31.0	838.0	114.0	23.0	846.0	24.0	234.0	322.0
g	0	0	0	0	0	0	0	0	0	419.0	369.0	62.0	655.0	135.0	41.0	722.0	32.0	44.0	36.0	60.0	160.0
t	0	0	0	0	0	0	0	0	0	252.0	30.0	816.0	191.0	86.0	41.0	34.0	905.0	57.0	33.0	676.0	220.0
MA1536.1_rc_shift10 (NR2C2(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1536.1_rc (NR2C2(var.2)_rc); m=25/36; ncol2=8; w=8; offset=2; strand=R; shift=10; score=0.49902; ----------dYGACCyy---
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	5122.0	0.0	4406.0	18628.0	4790.0	1341.0	0.0	2861.0	0	0	0
c	0	0	0	0	0	0	0	0	0	0	3684.0	6639.0	1643.0	1588.0	18628.0	18628.0	8395.0	6420.0	0	0	0
g	0	0	0	0	0	0	0	0	0	0	4757.0	0.0	18628.0	0.0	0.0	236.0	719.0	3111.0	0	0	0
t	0	0	0	0	0	0	0	0	0	0	5065.0	18628.0	0.0	0.0	0.0	0.0	10232.0	6236.0	0	0	0
MA0160.1_rc_shift10 (NR4A2_rc) 
; oligos_6nt_mkv4_m14 versus MA0160.1_rc (NR4A2_rc); m=26/36; ncol2=8; w=8; offset=2; strand=R; shift=10; score=0.476902; ----------gTGACCTt---
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	0.0	0.0	1.0	10.0	0.0	1.0	0.0	1.0	0	0	0
c	0	0	0	0	0	0	0	0	0	0	2.0	0.0	0.0	0.0	11.0	13.0	1.0	3.0	0	0	0
g	0	0	0	0	0	0	0	0	0	0	8.0	0.0	13.0	2.0	0.0	0.0	0.0	1.0	0	0	0
t	0	0	0	0	0	0	0	0	0	0	3.0	14.0	0.0	2.0	3.0	0.0	13.0	8.0	0	0	0
MA0693.2_rc_shift11 (VDR_rc) 
; oligos_6nt_mkv4_m14 versus MA0693.2_rc (VDR_rc); m=27/36; ncol2=8; w=8; offset=3; strand=R; shift=11; score=0.437039; -----------TGAACyyr--
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	0	19.0	174.0	827.0	890.0	32.0	34.0	32.0	455.0	0	0
c	0	0	0	0	0	0	0	0	0	0	0	76.0	28.0	82.0	70.0	919.0	386.0	567.0	43.0	0	0
g	0	0	0	0	0	0	0	0	0	0	0	19.0	743.0	31.0	23.0	25.0	24.0	45.0	280.0	0	0
t	0	0	0	0	0	0	0	0	0	0	0	886.0	55.0	61.0	17.0	24.0	555.0	356.0	222.0	0	0
MA1576.1_shift0 (THRB(var.3)) 
; oligos_6nt_mkv4_m14 versus MA1576.1 (THRB(var.3)); m=28/36; ncol2=19; w=11; offset=-8; strand=D; shift=0; score=0.43414; rTGACCTyacrTGACCTyA--
; cor=; Ncor=
a	119.0	0.0	28.0	389.0	0.0	0.0	13.0	11.0	263.0	42.0	102.0	0.0	0.0	389.0	0.0	7.0	0.0	0.0	323.0	0	0
c	31.0	8.0	89.0	19.0	389.0	389.0	75.0	134.0	28.0	221.0	86.0	0.0	0.0	11.0	389.0	389.0	9.0	175.0	8.0	0	0
g	157.0	0.0	389.0	17.0	4.0	59.0	38.0	93.0	89.0	71.0	205.0	6.0	389.0	0.0	0.0	3.0	0.0	73.0	74.0	0	0
t	82.0	381.0	45.0	71.0	17.0	20.0	389.0	151.0	9.0	54.0	0.0	393.0	3.0	86.0	2.0	4.0	389.0	214.0	0.0	0	0
MA0258.2_rc_shift2 (ESR2_rc) 
; oligos_6nt_mkv4_m14 versus MA0258.2_rc (ESR2_rc); m=29/36; ncol2=15; w=9; offset=-6; strand=R; shift=2; score=0.432803; --rGGtCasksTGACCy----
; cor=; Ncor=
a	0	0	4095.0	1278.0	977.0	1518.0	66.0	5133.0	1752.0	1228.0	801.0	87.0	89.0	7033.0	41.0	644.0	174.0	0	0	0	0
c	0	0	606.0	0.0	363.0	1391.0	6658.0	533.0	2173.0	1688.0	2738.0	57.0	533.0	989.0	8143.0	7170.0	2563.0	0	0	0	0
g	0	0	2708.0	5854.0	6469.0	2056.0	398.0	975.0	2510.0	3235.0	4202.0	1.0	7621.0	147.0	0.0	0.0	96.0	0	0	0	0
t	0	0	834.0	1111.0	434.0	3278.0	1121.0	1602.0	1808.0	2092.0	502.0	8098.0	0.0	74.0	59.0	429.0	5410.0	0	0	0	0
MA1538.1_shift3 (NR2F1(var.3)) 
; oligos_6nt_mkv4_m14 versus MA1538.1 (NR2F1(var.3)); m=30/36; ncol2=15; w=10; offset=-5; strand=D; shift=3; score=0.428706; ---rrGGTCRtTGACCYy---
; cor=; Ncor=
a	0	0	0	1651.0	2466.0	44.0	75.0	22.0	20.0	2473.0	813.0	0.0	81.0	3515.0	0.0	131.0	57.0	308.0	0	0	0
c	0	0	0	280.0	75.0	121.0	45.0	87.0	3515.0	58.0	855.0	89.0	15.0	95.0	3515.0	3515.0	949.0	1177.0	0	0	0
g	0	0	0	1271.0	1049.0	3515.0	3515.0	232.0	58.0	1041.0	858.0	52.0	3515.0	0.0	1.0	75.0	32.0	205.0	0	0	0
t	0	0	0	312.0	79.0	356.0	67.0	3515.0	171.0	4.0	990.0	3515.0	12.0	0.0	45.0	50.0	2566.0	1825.0	0	0	0
MA1539.1_shift3 (NR2F6(var.3)) 
; oligos_6nt_mkv4_m14 versus MA1539.1 (NR2F6(var.3)); m=31/36; ncol2=15; w=10; offset=-5; strand=D; shift=3; score=0.427097; ---rAGGTCAbTGACCTy---
; cor=; Ncor=
a	0	0	0	6349.0	8959.0	31.0	38.0	26.0	4.0	9114.0	2492.0	66.0	387.0	11749.0	159.0	82.0	23.0	910.0	0	0	0
c	0	0	0	727.0	26.0	1.0	12.0	78.0	11749.0	39.0	3333.0	333.0	206.0	255.0	11749.0	11749.0	2844.0	3745.0	0	0	0
g	0	0	0	3736.0	2789.0	11749.0	11749.0	253.0	216.0	2634.0	2972.0	67.0	11749.0	107.0	0.0	9.0	26.0	718.0	0	0	0
t	0	0	0	937.0	20.0	124.0	145.0	11749.0	443.0	46.0	2952.0	11749.0	9.0	3.0	36.0	24.0	8905.0	6376.0	0	0	0
MA1556.1_rc_shift4 (RXRG(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA1556.1_rc (RXRG(var.2)_rc); m=32/36; ncol2=14; w=10; offset=-4; strand=R; shift=4; score=0.421938; ----rrGGTCrTGACCyy---
; cor=; Ncor=
a	0	0	0	0	761.0	1235.0	37.0	64.0	119.0	26.0	1279.0	0.0	16.0	2117.0	99.0	0.0	0.0	79.0	0	0	0
c	0	0	0	0	226.0	57.0	176.0	63.0	78.0	2117.0	0.0	0.0	1.0	33.0	2117.0	2117.0	853.0	1071.0	0	0	0
g	0	0	0	0	996.0	882.0	2117.0	2117.0	214.0	55.0	838.0	15.0	2117.0	5.0	31.0	107.0	7.0	164.0	0	0	0
t	0	0	0	0	135.0	23.0	144.0	144.0	2117.0	64.0	0.0	2117.0	0.0	12.0	7.0	0.0	1264.0	803.0	0	0	0
MA1575.1_shift10 (THRB(var.2)) 
; oligos_6nt_mkv4_m14 versus MA1575.1 (THRB(var.2)); m=33/36; ncol2=19; w=11; offset=2; strand=D; shift=10; score=0.416523; ----------gTGwCCTyrhy
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	1010.0	26.0	252.0	4111.0	29.0	1.0	0.0	286.0	2454.0	1060.0	63.0
c	0	0	0	0	0	0	0	0	0	0	624.0	618.0	642.0	351.0	4111.0	4111.0	1178.0	1512.0	241.0	1033.0	1266.0
g	0	0	0	0	0	0	0	0	0	0	1640.0	15.0	4111.0	432.0	2.0	2.0	77.0	872.0	1353.0	939.0	312.0
t	0	0	0	0	0	0	0	0	0	0	837.0	4111.0	230.0	1787.0	0.0	8.0	4111.0	1441.0	63.0	1079.0	2470.0
MA0728.1_rc_shift3 (Nr2f6(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA0728.1_rc (Nr2f6(var.2)_rc); m=34/36; ncol2=15; w=10; offset=-5; strand=R; shift=3; score=0.403529; ---TGACCTyTTGACCTy---
; cor=; Ncor=
a	0	0	0	0.0	3.0	369.0	5.0	0.0	0.0	59.0	9.0	1.0	51.0	378.0	0.0	0.0	3.0	0.0	0	0	0
c	0	0	0	9.0	0.0	0.0	155.0	324.0	0.0	94.0	7.0	0.0	1.0	1.0	183.0	210.0	53.0	172.0	0	0	0
g	0	0	0	0.0	678.0	0.0	0.0	0.0	0.0	0.0	4.0	30.0	667.0	0.0	0.0	0.0	0.0	16.0	0	0	0
t	0	0	0	446.0	0.0	2.0	0.0	0.0	258.0	165.0	406.0	494.0	0.0	0.0	1.0	0.0	265.0	100.0	0	0	0
MA0858.1_rc_shift11 (Rarb(var.2)_rc) 
; oligos_6nt_mkv4_m14 versus MA0858.1_rc (Rarb(var.2)_rc); m=35/36; ncol2=17; w=10; offset=3; strand=R; shift=11; score=0.401533; -----------TGACCTytrk
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	0	1.0	4.0	674.0	26.0	0.0	1.0	4.0	158.0	281.0	64.0
c	0	0	0	0	0	0	0	0	0	0	0	2.0	0.0	4.0	663.0	682.0	37.0	218.0	41.0	116.0	140.0
g	0	0	0	0	0	0	0	0	0	0	0	0.0	765.0	3.0	2.0	1.0	0.0	4.0	34.0	239.0	252.0
t	0	0	0	0	0	0	0	0	0	0	0	693.0	0.0	0.0	0.0	1.0	639.0	398.0	438.0	38.0	249.0
MA0159.1_rc_shift11 (RARA::RXRA_rc) 
; oligos_6nt_mkv4_m14 versus MA0159.1_rc (RARA::RXRA_rc); m=36/36; ncol2=17; w=10; offset=3; strand=R; shift=11; score=0.400096; -----------TGAMCTsycs
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	0	1.0	2.0	17.0	6.0	1.0	0.0	0.0	2.0	3.0	1.0
c	0	0	0	0	0	0	0	0	0	0	0	1.0	3.0	3.0	16.0	20.0	3.0	12.0	7.0	11.0	9.0
g	0	0	0	0	0	0	0	0	0	0	0	0.0	17.0	1.0	1.0	1.0	3.0	6.0	1.0	4.0	8.0
t	0	0	0	0	0	0	0	0	0	0	0	21.0	1.0	2.0	0.0	1.0	17.0	5.0	13.0	5.0	5.0