One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_6nt_mkv4_m34/peak-motifs_oligos_6nt_mkv4_m34.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_6nt_mkv4_m34/peak-motifs_oligos_6nt_mkv4_m34_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m34_shift8 ; 44 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_6nt_mkv4_m34_shift8 (oligos_6nt_mkv4_m34oligos_6nt_mkv4_m34)     
; oligos_6nt_mkv4_m34 (oligos_6nt_mkv4_m34oligos_6nt_mkv4_m34); m=0 (reference); ncol1=12; shift=8; ncol=20; --------ssAAGGTCAgvs
; Alignment reference
a	0	0	0	0	0	0	0	0	374	374	1685	1620	40	38	39	54	1553	143	447	394
c	0	0	0	0	0	0	0	0	488	543	3	73	60	12	10	1593	57	293	485	456
g	0	0	0	0	0	0	0	0	504	485	20	23	1576	1655	4	35	58	1154	481	510
t	0	0	0	0	0	0	0	0	373	337	31	23	63	34	1686	57	71	149	326	379
MA1111.1_shift8 (NR2F2) 
; oligos_6nt_mkv4_m34 versus MA1111.1 (NR2F2); m=1/43; ncol2=11; w=11; offset=0; strand=D; shift=8; score=0.873709; --------yaAAGGTCAar-
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	488.0	1027.0	1788.0	2084.0	37.0	33.0	17.0	30.0	2111.0	633.0	847.0	0
c	0	0	0	0	0	0	0	0	692.0	456.0	37.0	15.0	16.0	12.0	22.0	1978.0	16.0	503.0	384.0	0
g	0	0	0	0	0	0	0	0	418.0	320.0	173.0	82.0	2108.0	2132.0	30.0	26.0	43.0	544.0	572.0	0
t	0	0	0	0	0	0	0	0	606.0	401.0	206.0	23.0	43.0	27.0	2135.0	170.0	34.0	524.0	401.0	0
MA0017.2_shift8 (NR2F1) 
; oligos_6nt_mkv4_m34 versus MA0017.2 (NR2F1); m=2/43; ncol2=13; w=12; offset=0; strand=D; shift=8; score=0.797367; --------carRGGTCAmrr
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	4802.0	7266.0	6333.0	8496.0	0.0	0.0	0.0	0.0	12059.0	5116.0	3229.0	3276.0
c	0	0	0	0	0	0	0	0	11446.0	1692.0	387.0	0.0	30.0	0.0	0.0	12059.0	0.0	3055.0	2966.0	2470.0
g	0	0	0	0	0	0	0	0	3276.0	1153.0	4869.0	3791.0	12059.0	12059.0	0.0	0.0	91.0	1618.0	4395.0	3886.0
t	0	0	0	0	0	0	0	0	3980.0	1948.0	469.0	0.0	0.0	0.0	12059.0	0.0	0.0	2270.0	1469.0	2427.0
MA0141.3_shift8 (ESRRB) 
; oligos_6nt_mkv4_m34 versus MA0141.3 (ESRRB); m=3/43; ncol2=11; w=11; offset=0; strand=D; shift=8; score=0.790196; --------TCAAGGTCAww-
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	108.0	9.0	1746.0	1746.0	3.0	1.0	6.0	2.0	1746.0	702.0	692.0	0
c	0	0	0	0	0	0	0	0	373.0	1746.0	1.0	1.0	2.0	4.0	11.0	1746.0	0.0	256.0	328.0	0
g	0	0	0	0	0	0	0	0	75.0	255.0	0.0	3.0	1746.0	1746.0	8.0	1.0	56.0	42.0	189.0	0
t	0	0	0	0	0	0	0	0	1746.0	7.0	4.0	0.0	1.0	3.0	1746.0	15.0	3.0	1045.0	537.0	0
MA0643.1_shift8 (Esrrg) 
; oligos_6nt_mkv4_m34 versus MA0643.1 (Esrrg); m=4/43; ncol2=10; w=10; offset=0; strand=D; shift=8; score=0.761399; --------tsAAGGTCAw--
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	3489.0	705.0	14909.0	14909.0	12.0	0.0	472.0	7.0	14909.0	4305.0	0	0
c	0	0	0	0	0	0	0	0	5974.0	10009.0	0.0	12.0	7.0	17.0	41.0	14909.0	34.0	3207.0	0	0
g	0	0	0	0	0	0	0	0	2800.0	4901.0	603.0	34.0	14909.0	14909.0	844.0	271.0	1561.0	1181.0	0	0
t	0	0	0	0	0	0	0	0	14909.0	490.0	195.0	5.0	298.0	14.0	14909.0	1280.0	60.0	6216.0	0	0
MA1112.2_shift7 (NR4A1) 
; oligos_6nt_mkv4_m34 versus MA1112.2 (NR4A1); m=5/43; ncol2=12; w=11; offset=-1; strand=D; shift=7; score=0.758948; -------kwAAAGGTCAva-
; cor=; Ncor=
a	0	0	0	0	0	0	0	3484.0	4463.0	14313.0	15268.0	15684.0	427.0	300.0	365.0	70.0	15126.0	4456.0	5239.0	0
c	0	0	0	0	0	0	0	3283.0	3563.0	236.0	117.0	62.0	92.0	166.0	824.0	14949.0	151.0	3987.0	3370.0	0
g	0	0	0	0	0	0	0	4159.0	3380.0	823.0	333.0	128.0	12434.0	14964.0	1358.0	151.0	329.0	4075.0	3887.0	0
t	0	0	0	0	0	0	0	5001.0	4521.0	555.0	209.0	53.0	2974.0	497.0	13380.0	757.0	321.0	3409.0	3431.0	0
MA0592.3_shift6 (ESRRA) 
; oligos_6nt_mkv4_m34 versus MA0592.3 (ESRRA); m=6/43; ncol2=13; w=11; offset=-2; strand=D; shift=6; score=0.711682; ------kytCAAGGTCAya-
; cor=; Ncor=
a	0	0	0	0	0	0	5231.0	3546.0	2305.0	972.0	24681.0	24744.0	480.0	223.0	1003.0	293.0	24648.0	5535.0	9325.0	0
c	0	0	0	0	0	0	5066.0	8789.0	6446.0	21854.0	355.0	415.0	340.0	146.0	379.0	23989.0	226.0	9140.0	5586.0	0
g	0	0	0	0	0	0	9007.0	6312.0	1850.0	2323.0	556.0	569.0	24676.0	25332.0	949.0	786.0	781.0	4455.0	5892.0	0
t	0	0	0	0	0	0	6691.0	7348.0	15394.0	846.0	403.0	267.0	499.0	294.0	23664.0	927.0	340.0	6865.0	5192.0	0
MA1540.1_shift7 (NR5A1) 
; oligos_6nt_mkv4_m34 versus MA1540.1 (NR5A1); m=7/43; ncol2=11; w=10; offset=-1; strand=D; shift=7; score=0.67295; -------kyCAAGGyCry--
; cor=; Ncor=
a	0	0	0	0	0	0	0	767.0	906.0	84.0	4118.0	4118.0	0.0	0.0	951.0	70.0	4118.0	849.0	0	0
c	0	0	0	0	0	0	0	991.0	1690.0	4118.0	0.0	128.0	0.0	0.0	2021.0	4118.0	242.0	1323.0	0	0
g	0	0	0	0	0	0	0	1268.0	902.0	716.0	287.0	137.0	4118.0	4118.0	381.0	218.0	1684.0	820.0	0	0
t	0	0	0	0	0	0	0	1093.0	2428.0	135.0	4.0	143.0	86.0	0.0	4118.0	651.0	287.0	1126.0	0	0
MA1535.1_shift9 (NR2C1) 
; oligos_6nt_mkv4_m34 versus MA1535.1 (NR2C1); m=8/43; ncol2=9; w=9; offset=1; strand=D; shift=9; score=0.631487; ---------mrrGGTCAy--
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	2552.0	4035.0	4866.0	0.0	0.0	0.0	0.0	9622.0	2298.0	0	0
c	0	0	0	0	0	0	0	0	0	2848.0	1225.0	227.0	0.0	0.0	0.0	9622.0	0.0	2786.0	0	0
g	0	0	0	0	0	0	0	0	0	1997.0	5587.0	4756.0	9622.0	9622.0	271.0	321.0	1716.0	2039.0	0	0
t	0	0	0	0	0	0	0	0	0	2225.0	1316.0	55.0	297.0	0.0	9622.0	0.0	0.0	2499.0	0	0
MA0071.1_shift7 (RORA) 
; oligos_6nt_mkv4_m34 versus MA0071.1 (RORA); m=9/43; ncol2=10; w=9; offset=-1; strand=D; shift=7; score=0.629236; -------wwcwAGGTCA---
; cor=; Ncor=
a	0	0	0	0	0	0	0	15.0	9.0	6.0	11.0	21.0	0.0	0.0	0.0	0.0	25.0	0	0	0
c	0	0	0	0	0	0	0	1.0	1.0	12.0	2.0	0.0	0.0	0.0	0.0	25.0	0.0	0	0	0
g	0	0	0	0	0	0	0	2.0	0.0	4.0	5.0	4.0	25.0	25.0	0.0	0.0	0.0	0	0	0
t	0	0	0	0	0	0	0	7.0	15.0	3.0	7.0	0.0	0.0	0.0	25.0	0.0	0.0	0	0	0
MA0160.1_shift10 (NR4A2) 
; oligos_6nt_mkv4_m34 versus MA0160.1 (NR4A2); m=10/43; ncol2=8; w=8; offset=2; strand=D; shift=10; score=0.601087; ----------aAGGTCAc--
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	8.0	13.0	0.0	3.0	2.0	0.0	14.0	3.0	0	0
c	0	0	0	0	0	0	0	0	0	0	1.0	0.0	0.0	0.0	2.0	13.0	0.0	8.0	0	0
g	0	0	0	0	0	0	0	0	0	0	3.0	1.0	13.0	11.0	0.0	0.0	0.0	2.0	0	0
t	0	0	0	0	0	0	0	0	0	0	1.0	0.0	1.0	0.0	10.0	1.0	0.0	0.0	0	0
MA0505.1_shift4 (Nr5a2) 
; oligos_6nt_mkv4_m34 versus MA0505.1 (Nr5a2); m=11/43; ncol2=15; w=11; offset=-4; strand=D; shift=4; score=0.592381; ----ragtTCAAGGyCAgs-
; cor=; Ncor=
a	0	0	0	0	645.0	985.0	276.0	122.0	71.0	8.0	1685.0	1679.0	39.0	0.0	169.0	0.0	1437.0	271.0	249.0	0
c	0	0	0	0	224.0	170.0	198.0	378.0	351.0	1616.0	14.0	0.0	0.0	0.0	584.0	1568.0	20.0	345.0	693.0	0
g	0	0	0	0	634.0	336.0	990.0	366.0	23.0	74.0	0.0	23.0	1663.0	1702.0	61.0	12.0	90.0	740.0	454.0	0
t	0	0	0	0	199.0	211.0	238.0	836.0	1257.0	4.0	3.0	0.0	0.0	0.0	888.0	122.0	155.0	346.0	306.0	0
MA1536.1_shift10 (NR2C2(var.2)) 
; oligos_6nt_mkv4_m34 versus MA1536.1 (NR2C2(var.2)); m=12/43; ncol2=8; w=8; offset=2; strand=D; shift=10; score=0.559692; ----------rrGGTCRh--
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	6236.0	10232.0	0.0	0.0	0.0	0.0	18628.0	5065.0	0	0
c	0	0	0	0	0	0	0	0	0	0	3111.0	719.0	236.0	0.0	0.0	18628.0	0.0	4757.0	0	0
g	0	0	0	0	0	0	0	0	0	0	6420.0	8395.0	18628.0	18628.0	1588.0	1643.0	6639.0	3684.0	0	0
t	0	0	0	0	0	0	0	0	0	0	2861.0	0.0	1341.0	4790.0	18628.0	4406.0	0.0	5122.0	0	0
MA1150.1_shift7 (RORB) 
; oligos_6nt_mkv4_m34 versus MA1150.1 (RORB); m=13/43; ncol2=11; w=10; offset=-1; strand=D; shift=7; score=0.558203; -------AwttrGGTCAy--
; cor=; Ncor=
a	0	0	0	0	0	0	0	785.0	526.0	233.0	53.0	602.0	16.0	32.0	28.0	47.0	896.0	205.0	0	0
c	0	0	0	0	0	0	0	14.0	26.0	162.0	165.0	14.0	25.0	13.0	146.0	781.0	15.0	326.0	0	0
g	0	0	0	0	0	0	0	29.0	24.0	201.0	235.0	358.0	907.0	928.0	50.0	17.0	63.0	145.0	0	0
t	0	0	0	0	0	0	0	172.0	425.0	403.0	547.0	26.0	52.0	27.0	776.0	155.0	26.0	324.0	0	0
MA1541.1_shift7 (NR6A1) 
; oligos_6nt_mkv4_m34 versus MA1541.1 (NR6A1); m=14/43; ncol2=17; w=12; offset=-1; strand=D; shift=7; score=0.53653; -------gtcAAGkTCAAGk
; cor=; Ncor=
a	0	0	0	0	0	0	0	171.0	255.0	124.0	896.0	896.0	13.0	19.0	1.0	7.0	896.0	896.0	21.0	29.0
c	0	0	0	0	0	0	0	197.0	473.0	896.0	4.0	91.0	9.0	12.0	74.0	896.0	0.0	96.0	15.0	11.0
g	0	0	0	0	0	0	0	313.0	348.0	342.0	44.0	72.0	896.0	443.0	26.0	29.0	2.0	35.0	896.0	524.0
t	0	0	0	0	0	0	0	216.0	896.0	132.0	11.0	51.0	62.0	453.0	896.0	40.0	14.0	65.0	62.0	373.0
MA0729.1_shift2 (RARA) 
; oligos_6nt_mkv4_m34 versus MA0729.1 (RARA); m=15/43; ncol2=18; w=12; offset=-6; strand=D; shift=2; score=0.525964; --rAGGTCAAAAGGTCAAkk
; cor=; Ncor=
a	0	0	250.0	507.0	0.0	1.0	0.0	2.0	528.0	526.0	526.0	522.0	0.0	0.0	3.0	0.0	540.0	539.0	2.0	0.0
c	0	0	1.0	1.0	0.0	0.0	5.0	707.0	0.0	0.0	0.0	5.0	0.0	0.0	0.0	705.0	0.0	36.0	0.0	115.0
g	0	0	513.0	35.0	745.0	746.0	1.0	26.0	4.0	28.0	3.0	4.0	759.0	754.0	0.0	0.0	1.0	30.0	228.0	226.0
t	0	0	4.0	0.0	0.0	19.0	559.0	0.0	0.0	162.0	37.0	0.0	1.0	101.0	546.0	2.0	0.0	181.0	328.0	212.0
MA0857.1_shift9 (Rarb) 
; oligos_6nt_mkv4_m34 versus MA0857.1 (Rarb); m=16/43; ncol2=16; w=11; offset=1; strand=D; shift=9; score=0.492883; ---------aAAGGTCAAAA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	1098.0	1348.0	1309.0	0.0	0.0	6.0	1.0	1618.0	1559.0	1443.0	1541.0
c	0	0	0	0	0	0	0	0	0	257.0	33.0	2.0	0.0	1.0	4.0	1316.0	0.0	11.0	4.0	0.0
g	0	0	0	0	0	0	0	0	0	181.0	239.0	243.0	1964.0	1941.0	15.0	9.0	14.0	3.0	173.0	30.0
t	0	0	0	0	0	0	0	0	0	413.0	91.0	0.0	1.0	31.0	1777.0	8.0	0.0	84.0	24.0	0.0
MA1537.1_shift3 (NR2F1(var.2)) 
; oligos_6nt_mkv4_m34 versus MA1537.1 (NR2F1(var.2)); m=17/43; ncol2=15; w=10; offset=-5; strand=D; shift=3; score=0.49079; ---rrGGTCAAAGGTCAm--
; cor=; Ncor=
a	0	0	0	12164.0	20462.0	317.0	468.0	8.0	10.0	33956.0	33956.0	33956.0	13.0	242.0	21.0	37.0	33956.0	9117.0	0	0
c	0	0	0	4591.0	436.0	122.0	42.0	465.0	33956.0	6.0	228.0	48.0	0.0	0.0	751.0	33956.0	279.0	9477.0	0	0
g	0	0	0	13408.0	13494.0	33956.0	33956.0	1340.0	641.0	606.0	3361.0	2542.0	33956.0	33956.0	1854.0	1543.0	6237.0	7332.0	0	0
t	0	0	0	3792.0	280.0	767.0	744.0	33956.0	2239.0	19.0	2711.0	41.0	59.0	494.0	33956.0	4148.0	720.0	8029.0	0	0
MA1539.1_rc_shift10 (NR2F6(var.3)_rc) 
; oligos_6nt_mkv4_m34 versus MA1539.1_rc (NR2F6(var.3)_rc); m=18/43; ncol2=15; w=10; offset=2; strand=R; shift=10; score=0.48909; ----------rAGGTCAvTG
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	6376.0	8905.0	24.0	36.0	3.0	9.0	11749.0	2952.0	46.0	443.0
c	0	0	0	0	0	0	0	0	0	0	718.0	26.0	9.0	0.0	107.0	11749.0	67.0	2972.0	2634.0	216.0
g	0	0	0	0	0	0	0	0	0	0	3745.0	2844.0	11749.0	11749.0	255.0	206.0	333.0	3333.0	39.0	11749.0
t	0	0	0	0	0	0	0	0	0	0	910.0	23.0	82.0	159.0	11749.0	387.0	66.0	2492.0	9114.0	4.0
MA0115.1_shift2 (NR1H2::RXRA) 
; oligos_6nt_mkv4_m34 versus MA0115.1 (NR1H2::RXRA); m=19/43; ncol2=17; w=11; offset=-6; strand=D; shift=2; score=0.489015; --AAAGGTCAAAGGTCAAc-
; cor=; Ncor=
a	0	0	17.0	17.0	20.0	0.0	0.0	0.0	0.0	25.0	24.0	25.0	0.0	0.0	0.0	0.0	25.0	20.0	0.0	0
c	0	0	5.0	1.0	0.0	0.0	0.0	0.0	25.0	0.0	0.0	0.0	0.0	0.0	0.0	25.0	0.0	1.0	15.0	0
g	0	0	0.0	5.0	5.0	25.0	24.0	0.0	0.0	0.0	0.0	0.0	25.0	25.0	0.0	0.0	0.0	2.0	6.0	0
t	0	0	3.0	2.0	0.0	0.0	1.0	25.0	0.0	0.0	1.0	0.0	0.0	0.0	25.0	0.0	0.0	2.0	4.0	0
MA1538.1_rc_shift10 (NR2F1(var.3)_rc) 
; oligos_6nt_mkv4_m34 versus MA1538.1_rc (NR2F1(var.3)_rc); m=20/43; ncol2=15; w=10; offset=2; strand=R; shift=10; score=0.487243; ----------rRGGTCAaYG
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	1825.0	2566.0	50.0	45.0	0.0	12.0	3515.0	990.0	4.0	171.0
c	0	0	0	0	0	0	0	0	0	0	205.0	32.0	75.0	1.0	0.0	3515.0	52.0	858.0	1041.0	58.0
g	0	0	0	0	0	0	0	0	0	0	1177.0	949.0	3515.0	3515.0	95.0	15.0	89.0	855.0	58.0	3515.0
t	0	0	0	0	0	0	0	0	0	0	308.0	57.0	131.0	0.0	3515.0	81.0	0.0	813.0	2473.0	20.0
MA1494.1_shift3 (HNF4A(var.2)) 
; oligos_6nt_mkv4_m34 versus MA1494.1 (HNF4A(var.2)); m=21/43; ncol2=15; w=10; offset=-5; strand=D; shift=3; score=0.484415; ---rrGTCCAAAGGTCRm--
; cor=; Ncor=
a	0	0	0	212.0	301.0	3.0	2.0	100.0	7.0	651.0	651.0	651.0	0.0	3.0	0.0	2.0	465.0	174.0	0	0
c	0	0	0	70.0	7.0	2.0	1.0	651.0	651.0	0.0	1.0	0.0	0.0	0.0	4.0	651.0	5.0	217.0	0	0
g	0	0	0	325.0	350.0	651.0	17.0	41.0	4.0	7.0	2.0	5.0	651.0	651.0	24.0	7.0	186.0	101.0	0	0
t	0	0	0	43.0	7.0	7.0	651.0	104.0	15.0	0.0	3.0	0.0	1.0	64.0	651.0	35.0	9.0	159.0	0	0
MA1574.1_shift3 (THRB) 
; oligos_6nt_mkv4_m34 versus MA1574.1 (THRB); m=22/43; ncol2=15; w=10; offset=-5; strand=D; shift=3; score=0.476471; ---rrGGTCAAAGGTCRb--
; cor=; Ncor=
a	0	0	0	2306.0	4047.0	167.0	104.0	20.0	35.0	8626.0	8626.0	8626.0	24.0	36.0	23.0	136.0	8626.0	1936.0	0	0
c	0	0	0	1397.0	234.0	52.0	14.0	132.0	8626.0	16.0	165.0	43.0	6.0	14.0	246.0	8626.0	148.0	2190.0	0	0
g	0	0	0	3705.0	4579.0	8626.0	8626.0	726.0	824.0	817.0	2025.0	1900.0	8626.0	8626.0	1400.0	726.0	3668.0	2160.0	0	0
t	0	0	0	1219.0	74.0	392.0	1892.0	8626.0	1851.0	13.0	1587.0	11.0	61.0	2010.0	8626.0	2555.0	225.0	2340.0	0	0
MA0860.1_shift10 (Rarg(var.2)) 
; oligos_6nt_mkv4_m34 versus MA0860.1 (Rarg(var.2)); m=23/43; ncol2=17; w=10; offset=2; strand=D; shift=10; score=0.476374; ----------AAGGTCAmsA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	4074.0	4543.0	0.0	0.0	0.0	2.0	4044.0	1394.0	314.0	3248.0
c	0	0	0	0	0	0	0	0	0	0	10.0	7.0	4.0	0.0	11.0	6256.0	3.0	2677.0	1778.0	482.0
g	0	0	0	0	0	0	0	0	0	0	806.0	267.0	5888.0	5573.0	12.0	0.0	12.0	386.0	2442.0	558.0
t	0	0	0	0	0	0	0	0	0	0	31.0	0.0	2.0	200.0	4309.0	0.0	0.0	780.0	595.0	479.0
MA1552.1_rc_shift10 (RARB(var.3)_rc) 
; oligos_6nt_mkv4_m34 versus MA1552.1_rc (RARB(var.3)_rc); m=24/43; ncol2=14; w=10; offset=2; strand=R; shift=10; score=0.472025; ----------rAGGTCAyGA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	226.0	371.0	16.0	7.0	13.0	4.0	472.0	3.0	16.0	472.0
c	0	0	0	0	0	0	0	0	0	0	55.0	45.0	8.0	0.0	18.0	472.0	0.0	150.0	7.0	52.0
g	0	0	0	0	0	0	0	0	0	0	128.0	101.0	472.0	472.0	26.0	8.0	5.0	0.0	472.0	64.0
t	0	0	0	0	0	0	0	0	0	0	63.0	10.0	12.0	76.0	472.0	16.0	3.0	322.0	5.0	21.0
MA0258.2_shift11 (ESR2) 
; oligos_6nt_mkv4_m34 versus MA0258.2 (ESR2); m=25/43; ncol2=15; w=9; offset=3; strand=D; shift=11; score=0.469581; -----------rGGTCAsms
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	0	5410.0	429.0	59.0	74.0	0.0	8098.0	502.0	2092.0	1808.0
c	0	0	0	0	0	0	0	0	0	0	0	96.0	0.0	0.0	147.0	7621.0	1.0	4202.0	3235.0	2510.0
g	0	0	0	0	0	0	0	0	0	0	0	2563.0	7170.0	8143.0	989.0	533.0	57.0	2738.0	1688.0	2173.0
t	0	0	0	0	0	0	0	0	0	0	0	174.0	644.0	41.0	7033.0	89.0	87.0	801.0	1228.0	1752.0
MA1550.1_shift2 (PPARD) 
; oligos_6nt_mkv4_m34 versus MA1550.1 (PPARD); m=26/43; ncol2=16; w=10; offset=-6; strand=D; shift=2; score=0.466754; --arrGGTCAAAGGTCAh--
; cor=; Ncor=
a	0	0	4797.0	4470.0	6328.0	101.0	126.0	21.0	46.0	13105.0	12527.0	12693.0	35.0	29.0	0.0	115.0	12302.0	3806.0	0	0
c	0	0	2889.0	1311.0	75.0	20.0	10.0	28.0	11669.0	0.0	34.0	7.0	12.0	1.0	39.0	11920.0	39.0	3779.0	0	0
g	0	0	2378.0	7620.0	6808.0	13067.0	12074.0	415.0	931.0	151.0	866.0	1081.0	13135.0	12249.0	406.0	655.0	1641.0	2027.0	0	0
t	0	0	3116.0	977.0	13.0	87.0	2112.0	12957.0	1894.0	0.0	400.0	0.0	45.0	1832.0	12921.0	1600.0	51.0	3568.0	0	0
MA1553.1_rc_shift10 (RARG(var.3)_rc) 
; oligos_6nt_mkv4_m34 versus MA1553.1_rc (RARG(var.3)_rc); m=27/43; ncol2=14; w=10; offset=2; strand=R; shift=10; score=0.466595; ----------rAGGTCATGA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	1736.0	2756.0	48.0	12.0	200.0	12.0	3442.0	22.0	150.0	3442.0
c	0	0	0	0	0	0	0	0	0	0	282.0	275.0	18.0	5.0	128.0	3442.0	13.0	835.0	58.0	323.0
g	0	0	0	0	0	0	0	0	0	0	998.0	687.0	3442.0	3442.0	196.0	46.0	50.0	9.0	3442.0	293.0
t	0	0	0	0	0	0	0	0	0	0	427.0	54.0	106.0	997.0	3442.0	91.0	33.0	2607.0	28.0	344.0
MA0855.1_shift3 (RXRB) 
; oligos_6nt_mkv4_m34 versus MA0855.1 (RXRB); m=28/43; ncol2=14; w=9; offset=-5; strand=D; shift=3; score=0.46434; ---rRGGTCAAAGGTCA---
; cor=; Ncor=
a	0	0	0	1430.0	1659.0	14.0	1.0	0.0	37.0	5823.0	5820.0	5729.0	1.0	2.0	1.0	16.0	5738.0	0	0	0
c	0	0	0	342.0	8.0	1.0	0.0	2.0	7053.0	0.0	5.0	1.0	0.0	0.0	2.0	7053.0	13.0	0	0	0
g	0	0	0	3156.0	3737.0	3955.0	3642.0	11.0	112.0	12.0	119.0	221.0	3867.0	3745.0	19.0	102.0	299.0	0	0	0
t	0	0	0	224.0	3.0	10.0	492.0	4481.0	350.0	1.0	31.0	0.0	7.0	312.0	4431.0	184.0	3.0	0	0	0
MA0512.2_shift3 (Rxra) 
; oligos_6nt_mkv4_m34 versus MA0512.2 (Rxra); m=29/43; ncol2=14; w=9; offset=-5; strand=D; shift=3; score=0.464276; ---grGGTCAAAGGTCA---
; cor=; Ncor=
a	0	0	0	12568.0	21345.0	110.0	132.0	47.0	97.0	46204.0	45275.0	45265.0	39.0	63.0	44.0	63.0	44403.0	0	0	0
c	0	0	0	5031.0	200.0	77.0	72.0	109.0	44342.0	51.0	89.0	73.0	71.0	85.0	114.0	43686.0	158.0	0	0	0
g	0	0	0	30811.0	30406.0	38290.0	36414.0	372.0	577.0	120.0	830.0	1369.0	39798.0	38185.0	267.0	348.0	2447.0	0	0	0
t	0	0	0	2084.0	75.0	159.0	4372.0	40596.0	2686.0	21.0	368.0	19.0	51.0	3335.0	39867.0	1775.0	37.0	0	0	0
MA0677.1_shift3 (Nr2f6) 
; oligos_6nt_mkv4_m34 versus MA0677.1 (Nr2f6); m=30/43; ncol2=14; w=9; offset=-5; strand=D; shift=3; score=0.463045; ---rrGGTCAAAGGTCA---
; cor=; Ncor=
a	0	0	0	152.0	216.0	10.0	11.0	6.0	11.0	454.0	425.0	450.0	2.0	4.0	2.0	1.0	449.0	0	0	0
c	0	0	0	68.0	11.0	7.0	8.0	18.0	523.0	6.0	11.0	2.0	2.0	1.0	10.0	614.0	7.0	0	0	0
g	0	0	0	163.0	158.0	312.0	305.0	25.0	18.0	8.0	42.0	35.0	320.0	314.0	15.0	21.0	44.0	0	0	0
t	0	0	0	55.0	6.0	21.0	24.0	385.0	56.0	8.0	35.0	0.0	5.0	16.0	419.0	59.0	7.0	0	0	0
MA0856.1_shift3 (RXRG) 
; oligos_6nt_mkv4_m34 versus MA0856.1 (RXRG); m=31/43; ncol2=14; w=9; offset=-5; strand=D; shift=3; score=0.461739; ---grGGTCAAAGGTCA---
; cor=; Ncor=
a	0	0	0	7824.0	14207.0	49.0	102.0	5.0	28.0	37922.0	34468.0	33003.0	9.0	12.0	2.0	78.0	36677.0	0	0	0
c	0	0	0	3800.0	63.0	4.0	9.0	35.0	56980.0	0.0	14.0	0.0	1.0	1.0	17.0	49963.0	43.0	0	0	0
g	0	0	0	21426.0	20865.0	23554.0	22312.0	126.0	734.0	76.0	970.0	1634.0	29532.0	27903.0	134.0	935.0	2323.0	0	0	0
t	0	0	0	1886.0	20.0	77.0	3946.0	39123.0	3942.0	4.0	574.0	5.0	20.0	3913.0	37558.0	2999.0	27.0	0	0	0
MA0072.1_shift4 (RORA(var.2)) 
; oligos_6nt_mkv4_m34 versus MA0072.1 (RORA(var.2)); m=32/43; ncol2=14; w=10; offset=-4; strand=D; shift=4; score=0.457351; ----wwwAwbTAGGTCAr--
; cor=; Ncor=
a	0	0	0	0	9.0	17.0	15.0	35.0	23.0	2.0	0.0	28.0	0.0	0.0	0.0	0.0	36.0	15.0	0	0
c	0	0	0	0	8.0	2.0	0.0	1.0	0.0	12.0	0.0	0.0	0.0	0.0	0.0	36.0	0.0	6.0	0	0
g	0	0	0	0	8.0	7.0	3.0	0.0	0.0	13.0	0.0	8.0	36.0	36.0	0.0	0.0	0.0	10.0	0	0
t	0	0	0	0	11.0	10.0	18.0	0.0	13.0	9.0	36.0	0.0	0.0	0.0	36.0	0.0	0.0	5.0	0	0
MA0112.3_shift10 (ESR1) 
; oligos_6nt_mkv4_m34 versus MA0112.3 (ESR1); m=33/43; ncol2=17; w=10; offset=2; strand=D; shift=10; score=0.453238; ----------arGGTCAcsr
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	232.0	402.0	0.0	2.0	0.0	1.0	471.0	108.0	127.0	235.0
c	0	0	0	0	0	0	0	0	0	0	65.0	6.0	0.0	0.0	0.0	452.0	0.0	338.0	223.0	88.0
g	0	0	0	0	0	0	0	0	0	0	101.0	206.0	623.0	638.0	3.0	0.0	30.0	53.0	340.0	284.0
t	0	0	0	0	0	0	0	0	0	0	88.0	0.0	34.0	0.0	549.0	2.0	0.0	23.0	65.0	13.0
MA1556.1_shift10 (RXRG(var.2)) 
; oligos_6nt_mkv4_m34 versus MA1556.1 (RXRG(var.2)); m=34/43; ncol2=14; w=10; offset=2; strand=D; shift=10; score=0.452116; ----------rrGGTCAyGA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	803.0	1264.0	0.0	7.0	12.0	0.0	2117.0	0.0	64.0	2117.0
c	0	0	0	0	0	0	0	0	0	0	164.0	7.0	107.0	31.0	5.0	2117.0	15.0	838.0	55.0	214.0
g	0	0	0	0	0	0	0	0	0	0	1071.0	853.0	2117.0	2117.0	33.0	1.0	0.0	0.0	2117.0	78.0
t	0	0	0	0	0	0	0	0	0	0	79.0	0.0	0.0	99.0	2117.0	16.0	0.0	1279.0	26.0	119.0
MA1576.1_rc_shift9 (THRB(var.3)_rc) 
; oligos_6nt_mkv4_m34 versus MA1576.1_rc (THRB(var.3)_rc); m=35/43; ncol2=19; w=11; offset=1; strand=R; shift=9; score=0.450432; ---------TrAGGTCAygt
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0.0	214.0	389.0	4.0	2.0	86.0	3.0	393.0	0.0	54.0	9.0
c	0	0	0	0	0	0	0	0	0	74.0	73.0	0.0	3.0	0.0	0.0	389.0	6.0	205.0	71.0	89.0
g	0	0	0	0	0	0	0	0	0	8.0	175.0	9.0	389.0	389.0	11.0	0.0	0.0	86.0	221.0	28.0
t	0	0	0	0	0	0	0	0	0	323.0	0.0	0.0	7.0	0.0	389.0	0.0	0.0	102.0	42.0	263.0
MA0859.1_shift2 (Rarg) 
; oligos_6nt_mkv4_m34 versus MA0859.1 (Rarg); m=36/43; ncol2=16; w=10; offset=-6; strand=D; shift=2; score=0.447312; --rRGGTCAAAAGGTCAa--
; cor=; Ncor=
a	0	0	12548.0	7220.0	3.0	0.0	20.0	3.0	8844.0	9169.0	8864.0	9211.0	1.0	0.0	6.0	0.0	9147.0	11044.0	0	0
c	0	0	1655.0	147.0	0.0	3.0	35.0	12653.0	2.0	49.0	13.0	4.0	1.0	2.0	40.0	11730.0	4.0	4836.0	0	0
g	0	0	11289.0	3074.0	12765.0	11969.0	64.0	38.0	15.0	114.0	618.0	394.0	13267.0	9298.0	51.0	67.0	82.0	2470.0	0	0
t	0	0	1309.0	5.0	0.0	1826.0	10030.0	79.0	0.0	257.0	353.0	0.0	3.0	2628.0	9774.0	105.0	1.0	5566.0	0	0
MA1151.1_shift5 (RORC) 
; oligos_6nt_mkv4_m34 versus MA1151.1 (RORC); m=37/43; ncol2=12; w=9; offset=-3; strand=D; shift=5; score=0.438479; -----dwAwgTrGGtCA---
; cor=; Ncor=
a	0	0	0	0	0	306.0	329.0	855.0	527.0	225.0	43.0	623.0	5.0	36.0	59.0	6.0	785.0	0	0	0
c	0	0	0	0	0	179.0	114.0	14.0	10.0	249.0	87.0	24.0	2.0	3.0	112.0	822.0	12.0	0	0	0
g	0	0	0	0	0	260.0	141.0	11.0	32.0	277.0	116.0	343.0	919.0	952.0	168.0	19.0	161.0	0	0	0
t	0	0	0	0	0	255.0	416.0	120.0	431.0	249.0	753.0	11.0	74.0	8.0	661.0	153.0	42.0	0	0	0
MA0728.1_shift10 (Nr2f6(var.2)) 
; oligos_6nt_mkv4_m34 versus MA0728.1 (Nr2f6(var.2)); m=38/43; ncol2=15; w=10; offset=2; strand=D; shift=10; score=0.423098; ----------rAGGTCAArA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	100.0	265.0	0.0	1.0	0.0	0.0	494.0	406.0	165.0	258.0
c	0	0	0	0	0	0	0	0	0	0	16.0	0.0	0.0	0.0	0.0	667.0	30.0	4.0	0.0	0.0
g	0	0	0	0	0	0	0	0	0	0	172.0	53.0	210.0	183.0	1.0	1.0	0.0	7.0	94.0	0.0
t	0	0	0	0	0	0	0	0	0	0	0.0	3.0	0.0	0.0	378.0	51.0	1.0	9.0	59.0	0.0
MA0730.1_shift0 (RARA(var.2)) 
; oligos_6nt_mkv4_m34 versus MA0730.1 (RARA(var.2)); m=39/43; ncol2=17; w=9; offset=-8; strand=D; shift=0; score=0.422884; AGGTCAysyaRAGGTCA---
; cor=; Ncor=
a	1089.0	0.0	0.0	6.0	10.0	1391.0	301.0	213.0	147.0	972.0	1015.0	1126.0	2.0	1.0	8.0	4.0	1486.0	0	0	0
c	24.0	0.0	2.0	11.0	1980.0	16.0	397.0	432.0	677.0	118.0	17.0	16.0	0.0	7.0	11.0	1923.0	3.0	0	0	0
g	313.0	1488.0	1451.0	17.0	9.0	11.0	84.0	584.0	157.0	198.0	348.0	269.0	1455.0	1440.0	13.0	26.0	25.0	0	0	0
t	0.0	2.0	71.0	1143.0	21.0	2.0	581.0	223.0	502.0	228.0	7.0	1.0	4.0	35.0	1131.0	22.0	10.0	0	0	0
MA0858.1_shift0 (Rarb(var.2)) 
; oligos_6nt_mkv4_m34 versus MA0858.1 (Rarb(var.2)); m=40/43; ncol2=17; w=9; offset=-8; strand=D; shift=0; score=0.418598; AGGTCAhmyarAGGTCA---
; cor=; Ncor=
a	610.0	0.0	2.0	0.0	1.0	728.0	293.0	249.0	38.0	438.0	398.0	639.0	1.0	0.0	0.0	0.0	693.0	0	0	0
c	3.0	1.0	1.0	2.0	686.0	0.0	210.0	252.0	239.0	34.0	4.0	0.0	1.0	2.0	3.0	765.0	0.0	0	0	0
g	39.0	713.0	663.0	0.0	2.0	4.0	15.0	140.0	116.0	41.0	218.0	37.0	682.0	663.0	4.0	0.0	2.0	0	0	0
t	0.0	0.0	22.0	694.0	1.0	0.0	204.0	64.0	281.0	158.0	4.0	1.0	0.0	26.0	674.0	4.0	1.0	0	0	0
MA1148.1_shift0 (PPARA::RXRA) 
; oligos_6nt_mkv4_m34 versus MA1148.1 (PPARA::RXRA); m=41/43; ncol2=18; w=10; offset=-8; strand=D; shift=0; score=0.418279; awgtrGGtcAaAGGTcAt--
; cor=; Ncor=
a	548.0	431.0	247.0	61.0	492.0	68.0	80.0	42.0	131.0	887.0	669.0	807.0	111.0	18.0	17.0	90.0	689.0	222.0	0	0
c	140.0	73.0	211.0	94.0	95.0	19.0	15.0	157.0	445.0	16.0	24.0	25.0	16.0	14.0	49.0	598.0	37.0	237.0	0	0
g	108.0	60.0	332.0	238.0	370.0	843.0	856.0	245.0	201.0	67.0	208.0	143.0	862.0	784.0	115.0	146.0	230.0	243.0	0	0
t	204.0	437.0	210.0	608.0	42.0	71.0	49.0	556.0	223.0	30.0	99.0	25.0	11.0	184.0	818.0	166.0	43.0	298.0	0	0
MA1149.1_shift10 (RARA::RXRG) 
; oligos_6nt_mkv4_m34 versus MA1149.1 (RARA::RXRG); m=42/43; ncol2=18; w=10; offset=2; strand=D; shift=10; score=0.416897; ----------rrGGTCAwgk
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0	0	345.0	496.0	13.0	11.0	5.0	18.0	874.0	272.0	215.0	211.0
c	0	0	0	0	0	0	0	0	0	0	113.0	38.0	3.0	3.0	15.0	831.0	5.0	239.0	249.0	212.0
g	0	0	0	0	0	0	0	0	0	0	413.0	460.0	954.0	828.0	71.0	58.0	111.0	154.0	320.0	272.0
t	0	0	0	0	0	0	0	0	0	0	129.0	6.0	30.0	158.0	909.0	93.0	10.0	334.0	215.0	305.0
MA0065.2_shift2 (Pparg::Rxra) 
; oligos_6nt_mkv4_m34 versus MA0065.2 (Pparg::Rxra); m=43/43; ncol2=15; w=9; offset=-6; strand=D; shift=2; score=0.400191; --strGGgcArAGGkcA---
; cor=; Ncor=
a	0	0	94.0	101.0	390.0	100.0	139.0	145.0	71.0	819.0	522.0	713.0	82.0	41.0	22.0	54.0	676.0	0	0	0
c	0	0	317.0	166.0	23.0	3.0	15.0	129.0	547.0	21.0	48.0	5.0	2.0	9.0	99.0	555.0	58.0	0	0	0
g	0	0	320.0	127.0	368.0	671.0	674.0	395.0	179.0	15.0	270.0	137.0	767.0	693.0	263.0	144.0	47.0	0	0	0
t	0	0	126.0	464.0	79.0	87.0	34.0	193.0	66.0	8.0	23.0	9.0	12.0	120.0	479.0	109.0	81.0	0	0	0