One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m15/peak-motifs_oligos_7nt_mkv5_m15.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m15/peak-motifs_oligos_7nt_mkv5_m15_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m15_shift3 ; 30 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_7nt_mkv5_m15_shift3 (oligos_7nt_mkv5_m15oligos_7nt_mkv5_m15)     
; oligos_7nt_mkv5_m15 (oligos_7nt_mkv5_m15oligos_7nt_mkv5_m15); m=0 (reference); ncol1=12; shift=3; ncol=18; ---ssCCCCGCCCss---
; Alignment reference
a	0	0	0	1000	828	280	70	74	0	2	78	41	14	760	687	0	0	0
c	0	0	0	2777	1841	5420	6189	6330	6795	2	6653	6344	6544	2872	2851	0	0	0
g	0	0	0	2235	3093	787	607	514	177	6963	151	535	373	2509	2542	0	0	0
t	0	0	0	960	1210	485	106	54	0	5	90	52	41	831	892	0	0	0
MA1513.1_shift4 (KLF15) 
; oligos_7nt_mkv5_m15 versus MA1513.1 (KLF15); m=1/29; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.903085; ----scCCCGCCCcs---
; cor=; Ncor=
a	0	0	0	0	1184.0	937.0	40.0	93.0	0.0	0.0	11.0	55.0	12.0	1566.0	1067.0	0	0	0
c	0	0	0	0	2903.0	6506.0	11234.0	10940.0	11368.0	0.0	11345.0	10954.0	11254.0	6267.0	5013.0	0	0	0
g	0	0	0	0	5538.0	2117.0	86.0	333.0	1.0	11369.0	2.0	359.0	100.0	1934.0	3124.0	0	0	0
t	0	0	0	0	1744.0	1809.0	9.0	3.0	0.0	0.0	11.0	1.0	3.0	1602.0	2165.0	0	0	0
MA0039.4_shift3 (KLF4) 
; oligos_7nt_mkv5_m15 versus MA0039.4 (KLF4); m=2/29; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.82235; ---ssCCCCACCChs---
; cor=; Ncor=
a	0	0	0	12570.0	11487.0	2465.0	2105.0	7021.0	1173.0	45602.0	852.0	1617.0	1202.0	16264.0	9959.0	0	0	0
c	0	0	0	17520.0	14038.0	49209.0	47865.0	45405.0	52875.0	161.0	52366.0	51112.0	51045.0	18249.0	19217.0	0	0	0
g	0	0	0	14243.0	18473.0	1583.0	1214.0	1422.0	793.0	6598.0	1470.0	1870.0	1005.0	6292.0	14422.0	0	0	0
t	0	0	0	11484.0	11819.0	2560.0	4633.0	1969.0	976.0	3456.0	1129.0	1218.0	2565.0	15012.0	12219.0	0	0	0
MA1653.1_shift3 (ZNF148) 
; oligos_7nt_mkv5_m15 versus MA1653.1 (ZNF148); m=3/29; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.813366; ---ysCCCCTCCCcc---
; cor=; Ncor=
a	0	0	0	1399.0	1263.0	82.0	132.0	136.0	89.0	133.0	66.0	352.0	442.0	846.0	841.0	0	0	0
c	0	0	0	4593.0	4057.0	10799.0	10396.0	10526.0	10833.0	14.0	10954.0	9922.0	9283.0	7239.0	7114.0	0	0	0
g	0	0	0	2241.0	3215.0	205.0	471.0	401.0	211.0	1012.0	112.0	460.0	392.0	1924.0	2064.0	0	0	0
t	0	0	0	2966.0	2664.0	113.0	200.0	136.0	66.0	10040.0	67.0	465.0	1082.0	1190.0	1180.0	0	0	0
MA1515.1_shift3 (KLF2) 
; oligos_7nt_mkv5_m15 versus MA1515.1 (KLF2); m=4/29; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.780621; ---srCCmCrCCCw----
; cor=; Ncor=
a	0	0	0	1054.0	2510.0	741.0	403.0	4622.0	0.0	1702.0	0.0	128.0	68.0	1838.0	0	0	0	0
c	0	0	0	1376.0	1103.0	4622.0	4622.0	2265.0	4622.0	274.0	4622.0	4622.0	4622.0	1142.0	0	0	0	0
g	0	0	0	1320.0	2112.0	495.0	186.0	1060.0	0.0	2920.0	49.0	195.0	105.0	389.0	0	0	0	0
t	0	0	0	872.0	433.0	346.0	312.0	214.0	78.0	167.0	22.0	9.0	444.0	1253.0	0	0	0	0
MA0746.2_shift3 (SP3) 
; oligos_7nt_mkv5_m15 versus MA0746.2 (SP3); m=5/29; ncol2=13; w=12; offset=0; strand=D; shift=3; score=0.768937; ---srCCACGCCCmCy--
; cor=; Ncor=
a	0	0	0	1267.0	2146.0	664.0	160.0	5253.0	6.0	465.0	0.0	0.0	2.0	3430.0	556.0	1516.0	0	0
c	0	0	0	1884.0	531.0	6591.0	6591.0	1338.0	6591.0	0.0	6591.0	6591.0	6591.0	3160.0	5116.0	2608.0	0	0
g	0	0	0	1895.0	4445.0	226.0	54.0	2.0	0.0	6591.0	0.0	0.0	2.0	39.0	297.0	524.0	0	0
t	0	0	0	1545.0	421.0	345.0	202.0	11.0	12.0	504.0	0.0	9.0	718.0	552.0	1475.0	1943.0	0	0
MA0741.1_shift4 (KLF16) 
; oligos_7nt_mkv5_m15 versus MA0741.1 (KLF16); m=6/29; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.750502; ----gmCMCgCCCMC---
; cor=; Ncor=
a	0	0	0	0	666.0	901.0	62.0	1150.0	66.0	497.0	8.0	2.0	16.0	437.0	32.0	0	0	0
c	0	0	0	0	535.0	1612.0	1612.0	461.0	1612.0	173.0	1612.0	1612.0	1612.0	1175.0	1612.0	0	0	0
g	0	0	0	0	1612.0	77.0	6.0	32.0	17.0	1612.0	0.0	8.0	3.0	19.0	23.0	0	0	0
t	0	0	0	0	240.0	116.0	45.0	0.0	19.0	403.0	0.0	0.0	97.0	40.0	370.0	0	0	0
MA0599.1_shift4 (KLF5) 
; oligos_7nt_mkv5_m15 versus MA0599.1 (KLF5); m=7/29; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.748833; ----gCCMCrCCCh----
; cor=; Ncor=
a	0	0	0	0	1429.0	0.0	0.0	3477.0	0.0	5051.0	0.0	0.0	0.0	3915.0	0	0	0	0
c	0	0	0	0	2023.0	11900.0	12008.0	9569.0	13611.0	0.0	13611.0	13611.0	13135.0	5595.0	0	0	0	0
g	0	0	0	0	7572.0	0.0	0.0	0.0	0.0	5182.0	0.0	0.0	0.0	0.0	0	0	0	0
t	0	0	0	0	2587.0	1711.0	1603.0	565.0	0.0	3378.0	0.0	0.0	476.0	4101.0	0	0	0	0
MA1516.1_shift3 (KLF3) 
; oligos_7nt_mkv5_m15 versus MA1516.1 (KLF3); m=8/29; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.733289; ---grCCrCGCCCw----
; cor=; Ncor=
a	0	0	0	7717.0	24771.0	1442.0	298.0	26757.0	2261.0	4245.0	202.0	83.0	77.0	17029.0	0	0	0	0
c	0	0	0	2655.0	615.0	43259.0	43259.0	707.0	43259.0	334.0	43259.0	43259.0	43259.0	10099.0	0	0	0	0
g	0	0	0	26568.0	18489.0	1954.0	248.0	16503.0	21.0	43259.0	31.0	29.0	48.0	1514.0	0	0	0	0
t	0	0	0	6319.0	207.0	705.0	335.0	419.0	1409.0	1212.0	0.0	0.0	1218.0	14617.0	0	0	0	0
MA1512.1_shift4 (KLF11) 
; oligos_7nt_mkv5_m15 versus MA1512.1 (KLF11); m=9/29; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.726016; ----gcCACGCCCmC---
; cor=; Ncor=
a	0	0	0	0	1882.0	2022.0	650.0	8655.0	0.0	2426.0	11.0	1.0	0.0	4689.0	581.0	0	0	0
c	0	0	0	0	2054.0	5549.0	8662.0	1289.0	9142.0	52.0	9161.0	9166.0	8941.0	4226.0	8403.0	0	0	0
g	0	0	0	0	3930.0	401.0	156.0	115.0	0.0	8291.0	18.0	20.0	4.0	69.0	358.0	0	0	0
t	0	0	0	0	1299.0	1192.0	506.0	27.0	38.0	349.0	23.0	7.0	885.0	761.0	1281.0	0	0	0
MA1517.1_shift3 (KLF6) 
; oligos_7nt_mkv5_m15 versus MA1517.1 (KLF6); m=10/29; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.723034; ---srcCACRCCCm----
; cor=; Ncor=
a	0	0	0	443.0	1035.0	569.0	432.0	2192.0	0.0	1024.0	0.0	25.0	71.0	955.0	0	0	0	0
c	0	0	0	624.0	490.0	2192.0	2192.0	284.0	2192.0	0.0	2192.0	2192.0	2192.0	665.0	0	0	0	0
g	0	0	0	626.0	1157.0	332.0	298.0	60.0	0.0	2192.0	0.0	60.0	12.0	52.0	0	0	0	0
t	0	0	0	499.0	136.0	219.0	140.0	60.0	24.0	0.0	0.0	0.0	64.0	520.0	0	0	0	0
MA1564.1_shift4 (SP9) 
; oligos_7nt_mkv5_m15 versus MA1564.1 (SP9); m=11/29; ncol2=12; w=11; offset=1; strand=D; shift=4; score=0.722808; ----rcCmCGCCCmcy--
; cor=; Ncor=
a	0	0	0	0	834.0	566.0	321.0	2451.0	2.0	211.0	22.0	0.0	39.0	1192.0	188.0	420.0	0	0
c	0	0	0	0	440.0	2451.0	2451.0	1127.0	2451.0	200.0	2451.0	2451.0	2451.0	1259.0	1863.0	1167.0	0	0
g	0	0	0	0	952.0	309.0	113.0	56.0	17.0	2451.0	0.0	0.0	24.0	38.0	191.0	204.0	0	0
t	0	0	0	0	226.0	518.0	284.0	96.0	9.0	173.0	14.0	30.0	412.0	353.0	588.0	660.0	0	0
MA1522.1_shift3 (MAZ) 
; oligos_7nt_mkv5_m15 versus MA1522.1 (MAZ); m=12/29; ncol2=11; w=11; offset=0; strand=D; shift=3; score= 0.7152; ---ssCCCCTCCcc----
; cor=; Ncor=
a	0	0	0	2480.0	1819.0	17.0	49.0	36.0	39.0	6.0	90.0	23.0	1109.0	2016.0	0	0	0	0
c	0	0	0	5198.0	5068.0	14945.0	14630.0	14731.0	14676.0	0.0	14961.0	14944.0	9372.0	6775.0	0	0	0	0
g	0	0	0	4277.0	5163.0	75.0	384.0	290.0	347.0	130.0	8.0	96.0	1768.0	2539.0	0	0	0	0
t	0	0	0	3108.0	3013.0	26.0	0.0	6.0	1.0	14927.0	4.0	0.0	2814.0	3733.0	0	0	0	0
MA0471.2_rc_shift2 (E2F6_rc) 
; oligos_7nt_mkv5_m15 versus MA0471.2_rc (E2F6_rc); m=13/29; ncol2=13; w=12; offset=-1; strand=R; shift=2; score=0.697037; --syTTCCCGCCyyc---
; cor=; Ncor=
a	0	0	5600.0	4163.0	757.0	268.0	296.0	353.0	813.0	2125.0	205.0	453.0	6897.0	5665.0	5369.0	0	0	0
c	0	0	11405.0	12530.0	5021.0	2322.0	31614.0	31973.0	30573.0	693.0	31790.0	29387.0	11562.0	11649.0	12358.0	0	0	0
g	0	0	8477.0	7410.0	1595.0	1171.0	834.0	434.0	539.0	26424.0	837.0	1148.0	5102.0	7405.0	8075.0	0	0	0
t	0	0	7616.0	8995.0	25725.0	29337.0	354.0	338.0	1173.0	3856.0	266.0	2110.0	9537.0	8379.0	7296.0	0	0	0
MA0753.2_shift2 (ZNF740) 
; oligos_7nt_mkv5_m15 versus MA0753.2 (ZNF740); m=14/29; ncol2=13; w=12; offset=-1; strand=D; shift=2; score=0.684016; --cyrCCCCCCCCAc---
; cor=; Ncor=
a	0	0	186.0	162.0	727.0	60.0	110.0	18.0	22.0	23.0	10.0	2.0	115.0	1055.0	207.0	0	0	0
c	0	0	502.0	677.0	343.0	1055.0	1055.0	1055.0	1055.0	1055.0	1055.0	1055.0	1055.0	239.0	1055.0	0	0	0
g	0	0	182.0	72.0	1055.0	37.0	14.0	4.0	7.0	3.0	7.0	3.0	6.0	68.0	54.0	0	0	0
t	0	0	185.0	378.0	312.0	49.0	1.0	16.0	15.0	11.0	6.0	3.0	4.0	134.0	246.0	0	0	0
MA0747.1_shift4 (SP8) 
; oligos_7nt_mkv5_m15 versus MA0747.1 (SP8); m=15/29; ncol2=12; w=11; offset=1; strand=D; shift=4; score=0.671442; ----rmCACgCCCmCy--
; cor=; Ncor=
a	0	0	0	0	52.0	54.0	25.0	133.0	7.0	25.0	5.0	2.0	0.0	90.0	13.0	31.0	0	0
c	0	0	0	0	27.0	113.0	167.0	33.0	167.0	37.0	167.0	167.0	167.0	77.0	167.0	52.0	0	0
g	0	0	0	0	78.0	0.0	0.0	1.0	1.0	167.0	6.0	3.0	4.0	6.0	21.0	1.0	0	0
t	0	0	0	0	10.0	4.0	13.0	2.0	5.0	39.0	2.0	0.0	15.0	3.0	39.0	82.0	0	0
MA0740.1_shift3 (KLF14) 
; oligos_7nt_mkv5_m15 versus MA0740.1 (KLF14); m=16/29; ncol2=14; w=12; offset=0; strand=D; shift=3; score=0.665571; ---krcCACGCCCmYyt-
; cor=; Ncor=
a	0	0	0	430.0	1205.0	526.0	0.0	1708.0	2.0	69.0	0.0	0.0	0.0	716.0	32.0	280.0	649.0	0
c	0	0	0	215.0	73.0	1360.0	1599.0	136.0	1596.0	36.0	1602.0	1604.0	1609.0	961.0	1463.0	594.0	741.0	0
g	0	0	0	966.0	2280.0	96.0	10.0	58.0	0.0	2939.0	3.0	3.0	4.0	1.0	15.0	89.0	314.0	0
t	0	0	0	693.0	71.0	404.0	248.0	5.0	2.0	31.0	0.0	6.0	65.0	31.0	559.0	1041.0	1670.0	0
MA0079.4_shift1 (SP1) 
; oligos_7nt_mkv5_m15 versus MA0079.4 (SP1); m=17/29; ncol2=15; w=12; offset=-2; strand=D; shift=1; score=0.65386; -ywrRCCACGCCCmCh--
; cor=; Ncor=
a	0	7866.0	28233.0	28895.0	14584.0	962.0	55.0	42154.0	0.0	959.0	0.0	8.0	0.0	24666.0	1195.0	12598.0	0	0
c	0	13273.0	1872.0	1530.0	0.0	48854.0	49649.0	12672.0	49660.0	0.0	49666.0	49662.0	48772.0	24196.0	37612.0	15606.0	0	0
g	0	9691.0	999.0	19477.0	37543.0	82.0	0.0	0.0	0.0	48957.0	0.0	0.0	0.0	15.0	919.0	3044.0	0	0
t	0	18833.0	19877.0	1184.0	153.0	124.0	1670.0	0.0	31.0	867.0	17.0	0.0	1440.0	1373.0	10717.0	18415.0	0	0
MA1511.1_shift4 (KLF10) 
; oligos_7nt_mkv5_m15 versus MA1511.1 (KLF10); m=18/29; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.649526; ----gmCACrCCCmy---
; cor=; Ncor=
a	0	0	0	0	4746.0	6633.0	633.0	18751.0	238.0	13506.0	1.0	0.0	0.0	7545.0	934.0	0	0	0
c	0	0	0	0	2435.0	12654.0	19619.0	1663.0	19907.0	11.0	19995.0	19994.0	19244.0	11403.0	13118.0	0	0	0
g	0	0	0	0	14086.0	1299.0	98.0	1723.0	3.0	6234.0	2.0	0.0	0.0	587.0	770.0	0	0	0
t	0	0	0	0	1251.0	1373.0	485.0	6.0	157.0	543.0	0.0	0.0	2198.0	2686.0	6274.0	0	0	0
MA0516.2_shift0 (SP2) 
; oligos_7nt_mkv5_m15 versus MA0516.2 (SP2); m=19/29; ncol2=17; w=12; offset=-3; strand=D; shift=0; score=0.607536; mTAAGyCCCGCCCmCyy-
; cor=; Ncor=
a	256.0	53.0	613.0	753.0	54.0	34.0	14.0	16.0	4.0	82.0	0.0	5.0	23.0	402.0	22.0	109.0	150.0	0
c	308.0	171.0	76.0	84.0	127.0	456.0	774.0	786.0	788.0	52.0	795.0	793.0	774.0	390.0	679.0	221.0	203.0	0
g	123.0	57.0	0.0	33.0	791.0	8.0	1.0	13.0	22.0	780.0	0.0	26.0	0.0	22.0	1.0	0.0	88.0	0
t	106.0	608.0	180.0	67.0	43.0	327.0	0.0	8.0	12.0	45.0	18.0	7.0	27.0	17.0	101.0	503.0	352.0	0
MA0742.1_shift3 (Klf12) 
; oligos_7nt_mkv5_m15 versus MA0742.1 (Klf12); m=20/29; ncol2=15; w=12; offset=0; strand=D; shift=3; score=0.589246; ---GrCCACGCCCwthtw
; cor=; Ncor=
a	0	0	0	167.0	553.0	19.0	5.0	853.0	9.0	215.0	0.0	0.0	0.0	410.0	238.0	308.0	238.0	271.0
c	0	0	0	35.0	11.0	668.0	670.0	27.0	675.0	1.0	687.0	706.0	715.0	120.0	219.0	239.0	186.0	210.0
g	0	0	0	1158.0	531.0	8.0	12.0	2.0	0.0	1348.0	0.0	9.0	0.0	0.0	99.0	84.0	117.0	141.0
t	0	0	0	225.0	0.0	9.0	3.0	0.0	4.0	16.0	4.0	13.0	13.0	483.0	403.0	290.0	429.0	330.0
MA0685.1_shift1 (SP4) 
; oligos_7nt_mkv5_m15 versus MA0685.1 (SP4); m=21/29; ncol2=17; w=12; offset=-2; strand=D; shift=1; score=0.580549; -ywrGCCACGCCCmCtyy
; cor=; Ncor=
a	0	621.0	2173.0	2600.0	939.0	260.0	2.0	3004.0	2.0	10.0	2.0	3.0	0.0	1840.0	113.0	1140.0	582.0	967.0
c	0	1405.0	156.0	146.0	6.0	4443.0	4492.0	991.0	4662.0	14.0	4681.0	4732.0	4667.0	2430.0	4276.0	897.0	1206.0	1180.0
g	0	823.0	65.0	1639.0	4774.0	0.0	5.0	3.0	0.0	5444.0	4.0	2.0	3.0	9.0	21.0	234.0	363.0	556.0
t	0	1622.0	1809.0	199.0	16.0	4.0	135.0	0.0	0.0	55.0	0.0	0.0	72.0	67.0	1067.0	3043.0	2078.0	1509.0
MA1122.1_rc_shift2 (TFDP1_rc) 
; oligos_7nt_mkv5_m15 versus MA1122.1_rc (TFDP1_rc); m=22/29; ncol2=11; w=10; offset=-1; strand=R; shift=2; score=0.557222; --ssTTCCCGCsc-----
; cor=; Ncor=
a	0	0	374.0	247.0	55.0	30.0	29.0	26.0	7.0	71.0	26.0	120.0	328.0	0	0	0	0	0
c	0	0	648.0	648.0	137.0	98.0	1919.0	1865.0	1932.0	22.0	1862.0	940.0	777.0	0	0	0	0	0
g	0	0	604.0	647.0	170.0	24.0	32.0	80.0	54.0	1886.0	71.0	684.0	491.0	0	0	0	0	0
t	0	0	381.0	465.0	1645.0	1855.0	27.0	36.0	14.0	28.0	48.0	263.0	411.0	0	0	0	0	0
MA0162.4_shift5 (EGR1) 
; oligos_7nt_mkv5_m15 versus MA0162.4 (EGR1); m=23/29; ncol2=14; w=10; offset=2; strand=D; shift=5; score=0.483154; -----ccmCGCCCACgCm
; cor=; Ncor=
a	0	0	0	0	0	7087.0	3997.0	14508.0	642.0	5110.0	227.0	1440.0	314.0	22297.0	153.0	4696.0	969.0	8903.0
c	0	0	0	0	0	11610.0	14749.0	10303.0	28403.0	1131.0	29338.0	27321.0	28958.0	5420.0	29507.0	2806.0	25196.0	10441.0
g	0	0	0	0	0	6621.0	7211.0	3854.0	756.0	22237.0	665.0	1455.0	698.0	2122.0	699.0	20544.0	2157.0	6345.0
t	0	0	0	0	0	5280.0	4641.0	1933.0	797.0	2120.0	368.0	382.0	628.0	759.0	239.0	2552.0	2276.0	4909.0
MA0657.1_shift2 (KLF13) 
; oligos_7nt_mkv5_m15 versus MA0657.1 (KLF13); m=24/29; ncol2=18; w=12; offset=-1; strand=D; shift=2; score=0.481904; --rtRmCACGCCCCYTTt
; cor=; Ncor=
a	0	0	1508.0	733.0	1891.0	496.0	75.0	2384.0	0.0	24.0	0.0	4.0	1.0	509.0	3.0	156.0	247.0	735.0
c	0	0	248.0	46.0	0.0	923.0	924.0	0.0	1353.0	2.0	1596.0	1469.0	1760.0	1766.0	638.0	350.0	235.0	554.0
g	0	0	915.0	796.0	4630.0	58.0	2.0	11.0	7.0	3028.0	0.0	0.0	0.0	0.0	3.0	54.0	270.0	841.0
t	0	0	590.0	1766.0	59.0	102.0	61.0	0.0	3.0	9.0	7.0	0.0	16.0	10.0	1403.0	2040.0	2968.0	2247.0
MA0597.1_shift7 (THAP1) 
; oligos_7nt_mkv5_m15 versus MA0597.1 (THAP1); m=25/29; ncol2=9; w=8; offset=4; strand=D; shift=7; score=0.462514; -------ytGCCMkya--
; cor=; Ncor=
a	0	0	0	0	0	0	0	18.0	15.0	20.0	7.0	3.0	58.0	47.0	30.0	116.0	0	0
c	0	0	0	0	0	0	0	93.0	47.0	0.0	182.0	195.0	136.0	17.0	71.0	34.0	0	0
g	0	0	0	0	0	0	0	27.0	12.0	137.0	0.0	0.0	1.0	77.0	41.0	17.0	0	0
t	0	0	0	0	0	0	0	61.0	125.0	42.0	10.0	1.0	4.0	58.0	57.0	32.0	0	0
MA0732.1_shift5 (EGR3) 
; oligos_7nt_mkv5_m15 versus MA0732.1 (EGR3); m=26/29; ncol2=15; w=10; offset=2; strand=D; shift=5; score=0.446073; -----yhmCGCCCMCGCA
; cor=; Ncor=
a	0	0	0	0	0	337.0	444.0	1031.0	2.0	66.0	0.0	0.0	0.0	1159.0	0.0	39.0	2.0	1262.0
c	0	0	0	0	0	645.0	485.0	701.0	1855.0	32.0	1856.0	1858.0	1823.0	455.0	1875.0	28.0	1899.0	54.0
g	0	0	0	0	0	278.0	191.0	10.0	0.0	2158.0	2.0	0.0	7.0	11.0	7.0	2152.0	1.0	168.0
t	0	0	0	0	0	470.0	540.0	20.0	13.0	36.0	0.0	10.0	80.0	4.0	2.0	26.0	21.0	80.0
MA1578.1_shift7 (VEZF1) 
; oligos_7nt_mkv5_m15 versus MA1578.1 (VEZF1); m=27/29; ncol2=10; w=8; offset=4; strand=D; shift=7; score=0.412209; -------CCCCCCmytw-
; cor=; Ncor=
a	0	0	0	0	0	0	0	71.0	1.0	4.0	2.0	6.0	10.0	406.0	44.0	240.0	333.0	0
c	0	0	0	0	0	0	0	790.0	997.0	995.0	997.0	989.0	977.0	357.0	550.0	171.0	173.0	0
g	0	0	0	0	0	0	0	137.0	0.0	0.0	0.0	0.0	3.0	110.0	70.0	211.0	152.0	0
t	0	0	0	0	0	0	0	0.0	0.0	0.0	0.0	4.0	8.0	125.0	334.0	377.0	339.0	0
MA0733.1_shift5 (EGR4) 
; oligos_7nt_mkv5_m15 versus MA0733.1 (EGR4); m=28/29; ncol2=16; w=10; offset=2; strand=D; shift=5; score=0.407265; -----yymCGCCCACGCA
; cor=; Ncor=
a	0	0	0	0	0	1167.0	1143.0	2745.0	101.0	556.0	11.0	120.0	0.0	4500.0	44.0	233.0	10.0	4608.0
c	0	0	0	0	0	1459.0	1664.0	1924.0	4466.0	475.0	4447.0	4448.0	4403.0	1055.0	4402.0	1793.0	4354.0	839.0
g	0	0	0	0	0	1004.0	527.0	151.0	150.0	7053.0	63.0	107.0	110.0	348.0	114.0	6862.0	183.0	829.0
t	0	0	0	0	0	1953.0	2131.0	158.0	319.0	707.0	88.0	76.0	131.0	363.0	245.0	253.0	219.0	483.0
MA1102.2_rc_shift7 (CTCFL_rc) 
; oligos_7nt_mkv5_m15 versus MA1102.2_rc (CTCFL_rc); m=29/29; ncol2=12; w=8; offset=4; strand=R; shift=7; score=0.40104; -------scGCCCCCTGs
; cor=; Ncor=
a	0	0	0	0	0	0	0	2198.0	1557.0	195.0	415.0	258.0	1122.0	242.0	185.0	25.0	1836.0	1251.0
c	0	0	0	0	0	0	0	6341.0	9299.0	68.0	17001.0	16819.0	15425.0	16511.0	17285.0	329.0	2033.0	7094.0
g	0	0	0	0	0	0	0	7727.0	3015.0	17593.0	270.0	767.0	1141.0	600.0	481.0	413.0	12867.0	7033.0
t	0	0	0	0	0	0	0	1771.0	4166.0	181.0	351.0	193.0	349.0	684.0	86.0	17270.0	1301.0	2659.0