One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m33/peak-motifs_oligos_7nt_mkv5_m33.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m33/peak-motifs_oligos_7nt_mkv5_m33_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m33_shift5 ; 33 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m33_shift5 (oligos_7nt_mkv5_m33oligos_7nt_mkv5_m33)
; oligos_7nt_mkv5_m33 (oligos_7nt_mkv5_m33oligos_7nt_mkv5_m33); m=0 (reference); ncol1=11; shift=5; ncol=19; -----srCGTCaCGss--- ; Alignment reference a 0 0 0 0 0 188 442 6 0 45 46 1089 1 3 166 234 0 0 0 c 0 0 0 0 0 677 405 1626 4 42 1345 172 1661 104 562 576 0 0 0 g 0 0 0 0 0 574 685 39 1666 21 234 378 8 1549 548 663 0 0 0 t 0 0 0 0 0 232 139 0 1 1563 46 32 1 15 395 198 0 0 0

MA0014.3_rc_shift5 (PAX5_rc)
; oligos_7nt_mkv5_m33 versus MA0014.3_rc (PAX5_rc); m=1/32; ncol2=12; w=11; offset=0; strand=R; shift=5; score=0.682342; -----vkGGTCACGCyy-- ; cor=; Ncor= a 0 0 0 0 0 387.0 318.0 144.0 18.0 60.0 4.0 1200.0 23.0 84.0 12.0 285.0 115.0 0 0 c 0 0 0 0 0 359.0 312.0 118.0 57.0 70.0 1355.0 30.0 1243.0 34.0 1231.0 354.0 578.0 0 0 g 0 0 0 0 0 403.0 405.0 1081.0 1305.0 39.0 37.0 88.0 35.0 1276.0 151.0 148.0 179.0 0 0 t 0 0 0 0 0 263.0 377.0 69.0 32.0 1243.0 16.0 94.0 111.0 18.0 18.0 625.0 540.0 0 0

MA0604.1_rc_shift5 (Atf1_rc)
; oligos_7nt_mkv5_m33 versus MA0604.1_rc (Atf1_rc); m=2/32; ncol2=8; w=8; offset=0; strand=R; shift=5; score=0.59207; -----tACGTCAy------ ; cor=; Ncor= a 0 0 0 0 0 100.0 712.0 0.0 0.0 0.0 175.0 960.0 65.0 0 0 0 0 0 0 c 0 0 0 0 0 163.0 0.0 993.0 0.0 0.0 803.0 0.0 387.0 0 0 0 0 0 0 g 0 0 0 0 0 138.0 198.0 0.0 1000.0 0.0 22.0 16.0 86.0 0 0 0 0 0 0 t 0 0 0 0 0 600.0 90.0 7.0 0.0 1000.0 0.0 24.0 462.0 0 0 0 0 0 0

MA0067.1_shift7 (Pax2)
; oligos_7nt_mkv5_m33 versus MA0067.1 (Pax2); m=3/32; ncol2=8; w=8; offset=2; strand=D; shift=7; score=0.574202; -------wgTCAykb---- ; cor=; Ncor= a 0 0 0 0 0 0 0 10.0 7.0 3.0 0.0 26.0 2.0 2.0 1.0 0 0 0 0 c 0 0 0 0 0 0 0 7.0 1.0 2.0 28.0 1.0 17.0 0.0 11.0 0 0 0 0 g 0 0 0 0 0 0 0 5.0 21.0 0.0 1.0 3.0 1.0 19.0 11.0 0 0 0 0 t 0 0 0 0 0 0 0 9.0 2.0 26.0 2.0 1.0 11.0 10.0 8.0 0 0 0 0

MA0831.2_rc_shift8 (TFE3_rc)
; oligos_7nt_mkv5_m33 versus MA0831.2_rc (TFE3_rc); m=4/32; ncol2=8; w=8; offset=3; strand=R; shift=8; score=0.573794; --------rTCACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 438.0 38.0 1.0 988.0 1.0 164.0 138.0 1.0 0 0 0 c 0 0 0 0 0 0 0 0 37.0 70.0 997.0 4.0 861.0 5.0 109.0 1.0 0 0 0 g 0 0 0 0 0 0 0 0 522.0 77.0 1.0 4.0 9.0 830.0 34.0 996.0 0 0 0 t 0 0 0 0 0 0 0 0 3.0 815.0 1.0 4.0 129.0 1.0 719.0 1.0 0 0 0

MA0603.1_shift7 (Arntl)
; oligos_7nt_mkv5_m33 versus MA0603.1 (Arntl); m=5/32; ncol2=10; w=9; offset=2; strand=D; shift=7; score=0.553426; -------dgTCACGTGh-- ; cor=; Ncor= a 0 0 0 0 0 0 0 251.0 246.0 62.0 3.0 953.0 2.0 48.0 54.0 9.0 255.0 0 0 c 0 0 0 0 0 0 0 229.0 125.0 44.0 997.0 16.0 965.0 3.0 58.0 4.0 331.0 0 0 g 0 0 0 0 0 0 0 261.0 558.0 143.0 0.0 10.0 9.0 946.0 51.0 938.0 146.0 0 0 t 0 0 0 0 0 0 0 259.0 71.0 752.0 0.0 21.0 24.0 3.0 837.0 48.0 268.0 0 0

MA0871.2_rc_shift7 (TFEC_rc)
; oligos_7nt_mkv5_m33 versus MA0871.2_rc (TFEC_rc); m=6/32; ncol2=11; w=9; offset=2; strand=R; shift=7; score=0.532662; -------gGTCACGTGsk- ; cor=; Ncor= a 0 0 0 0 0 0 0 1566.0 1052.0 47.0 0.0 7952.0 0.0 210.0 374.0 0.0 922.0 2725.0 0 c 0 0 0 0 0 0 0 1708.0 58.0 143.0 7952.0 0.0 7952.0 0.0 145.0 3.0 2302.0 2355.0 0 g 0 0 0 0 0 0 0 2828.0 6900.0 411.0 4.0 0.0 0.0 7952.0 0.0 7952.0 2887.0 4679.0 0 t 0 0 0 0 0 0 0 1850.0 17.0 7952.0 0.0 0.0 69.0 0.0 7952.0 0.0 1841.0 3273.0 0

MA1546.1_shift6 (PAX3(var.2))
; oligos_7nt_mkv5_m33 versus MA1546.1 (PAX3(var.2)); m=7/32; ncol2=16; w=10; offset=1; strand=D; shift=6; score=0.512505; ------ysGTCACGsywAT ; cor=; Ncor= a 0 0 0 0 0 0 203.0 112.0 1.0 181.0 9.0 1344.0 13.0 161.0 3.0 197.0 512.0 1344.0 50.0 c 0 0 0 0 0 0 515.0 880.0 2.0 79.0 1344.0 2.0 1344.0 1.0 836.0 414.0 228.0 152.0 43.0 g 0 0 0 0 0 0 216.0 464.0 1344.0 6.0 23.0 19.0 2.0 1344.0 508.0 127.0 138.0 353.0 24.0 t 0 0 0 0 0 0 411.0 167.0 126.0 1344.0 263.0 2.0 201.0 0.0 6.0 606.0 467.0 86.0 1344.0

MA0609.2_rc_shift0 (CREM_rc)
; oligos_7nt_mkv5_m33 versus MA0609.2_rc (CREM_rc); m=8/32; ncol2=16; w=11; offset=-5; strand=R; shift=0; score=0.501755; gcrgTGACGTCAcygc--- ; cor=; Ncor= a 3864.0 3965.0 5887.0 2936.0 561.0 433.0 15691.0 518.0 1582.0 401.0 672.0 15232.0 788.0 3764.0 3584.0 3800.0 0 0 0 c 4230.0 5523.0 2910.0 2156.0 730.0 1039.0 314.0 14026.0 897.0 619.0 14883.0 506.0 11144.0 4474.0 3956.0 5132.0 0 0 0 g 5132.0 3957.0 4473.0 11146.0 508.0 14883.0 622.0 901.0 14031.0 313.0 1038.0 730.0 2159.0 2908.0 5521.0 4230.0 0 0 0 t 3801.0 3582.0 3757.0 789.0 15228.0 672.0 400.0 1582.0 517.0 15694.0 434.0 559.0 2936.0 5881.0 3966.0 3865.0 0 0 0

MA0636.1_rc_shift8 (BHLHE41_rc)
; oligos_7nt_mkv5_m33 versus MA0636.1_rc (BHLHE41_rc); m=9/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.497226; --------gTCACGTGAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1963.0 23.0 0.0 5574.0 0.0 5.0 3.0 1.0 5574.0 59.0 0 c 0 0 0 0 0 0 0 0 985.0 7.0 5574.0 16.0 5574.0 1.0 21.0 3.0 1831.0 5574.0 0 g 0 0 0 0 0 0 0 0 5574.0 1229.0 1.0 16.0 1.0 5574.0 12.0 5574.0 17.0 1046.0 0 t 0 0 0 0 0 0 0 0 74.0 5574.0 1.0 19.0 2.0 1.0 5574.0 2.0 98.0 2894.0 0

MA1464.1_shift8 (ARNT2)
; oligos_7nt_mkv5_m33 versus MA1464.1 (ARNT2); m=10/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.485889; --------rtCACGTGms- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11781.0 9572.0 505.0 40622.0 0.0 84.0 651.0 14.0 18559.0 7892.0 0 c 0 0 0 0 0 0 0 0 4265.0 4901.0 40622.0 122.0 40622.0 0.0 932.0 0.0 22063.0 12448.0 0 g 0 0 0 0 0 0 0 0 28841.0 9525.0 115.0 532.0 0.0 40622.0 111.0 40622.0 3912.0 12031.0 0 t 0 0 0 0 0 0 0 0 1951.0 40622.0 0.0 460.0 148.0 0.0 40622.0 971.0 7159.0 8251.0 0

MA0828.1_rc_shift8 (SREBF2(var.2)_rc)
; oligos_7nt_mkv5_m33 versus MA0828.1_rc (SREBF2(var.2)_rc); m=11/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.485442; --------rTCACGTGAT- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1843.0 122.0 8.0 3957.0 0.0 11.0 12.0 1.0 3957.0 13.0 0 c 0 0 0 0 0 0 0 0 104.0 39.0 3957.0 0.0 3957.0 82.0 75.0 16.0 16.0 1059.0 0 g 0 0 0 0 0 0 0 0 2114.0 8.0 13.0 240.0 341.0 3957.0 2.0 3957.0 130.0 284.0 0 t 0 0 0 0 0 0 0 0 20.0 3957.0 3.0 44.0 21.0 3.0 3957.0 7.0 385.0 2898.0 0

MA1474.1_shift2 (CREB3L4)
; oligos_7nt_mkv5_m33 versus MA1474.1 (CREB3L4); m=12/32; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.477488; --ygCCACGTCAyc----- ; cor=; Ncor= a 0 0 876.0 828.0 1118.0 260.0 3891.0 13.0 306.0 53.0 500.0 3891.0 284.0 664.0 0 0 0 0 0 c 0 0 1802.0 247.0 3891.0 3891.0 50.0 3891.0 65.0 301.0 3891.0 515.0 2584.0 1740.0 0 0 0 0 0 g 0 0 959.0 3891.0 165.0 112.0 208.0 20.0 3891.0 63.0 690.0 769.0 729.0 788.0 0 0 0 0 0 t 0 0 2090.0 1403.0 246.0 221.0 8.0 130.0 0.0 3891.0 279.0 275.0 1308.0 698.0 0 0 0 0 0

MA1475.1_shift2 (CREB3L4(var.2))
; oligos_7nt_mkv5_m33 versus MA1475.1 (CREB3L4(var.2)); m=13/32; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.477459; --grTGACGTCAyc----- ; cor=; Ncor= a 0 0 229.0 504.0 0.0 35.0 1293.0 0.0 81.0 16.0 176.0 1293.0 116.0 234.0 0 0 0 0 0 c 0 0 224.0 221.0 138.0 265.0 27.0 1293.0 3.0 100.0 1293.0 35.0 748.0 582.0 0 0 0 0 0 g 0 0 570.0 790.0 48.0 1293.0 83.0 6.0 1293.0 36.0 227.0 153.0 282.0 265.0 0 0 0 0 0 t 0 0 270.0 75.0 1293.0 258.0 39.0 43.0 0.0 1293.0 59.0 40.0 546.0 212.0 0 0 0 0 0

MA1143.1_rc_shift3 (FOSL1::JUND(var.2)_rc)
; oligos_7nt_mkv5_m33 versus MA1143.1_rc (FOSL1::JUND(var.2)_rc); m=14/32; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.473095; ---rtkrcGTCAy------ ; cor=; Ncor= a 0 0 0 394.0 188.0 41.0 582.0 176.0 68.0 44.0 82.0 870.0 40.0 0 0 0 0 0 0 c 0 0 0 82.0 100.0 83.0 39.0 649.0 64.0 41.0 777.0 44.0 324.0 0 0 0 0 0 0 g 0 0 0 401.0 66.0 330.0 262.0 59.0 835.0 45.0 101.0 50.0 75.0 0 0 0 0 0 0 t 0 0 0 123.0 645.0 546.0 117.0 116.0 32.0 870.0 39.0 36.0 561.0 0 0 0 0 0 0

MA0006.1_rc_shift10 (Ahr::Arnt_rc)
; oligos_7nt_mkv5_m33 versus MA0006.1_rc (Ahr::Arnt_rc); m=15/32; ncol2=6; w=6; offset=5; strand=R; shift=10; score=0.468327; ----------CACGCr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 11.0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 2.0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 8.0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 3.0 0 0 0

MA0692.1_rc_shift8 (TFEB_rc)
; oligos_7nt_mkv5_m33 versus MA0692.1_rc (TFEB_rc); m=16/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.465926; --------rTCACGTGry- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2826.0 807.0 11.0 8715.0 5.0 1155.0 274.0 3.0 8715.0 343.0 0 c 0 0 0 0 0 0 0 0 558.0 872.0 8715.0 150.0 8715.0 83.0 62.0 0.0 2731.0 3748.0 0 g 0 0 0 0 0 0 0 0 5889.0 2342.0 10.0 169.0 288.0 8715.0 286.0 8715.0 4936.0 1553.0 0 t 0 0 0 0 0 0 0 0 283.0 8715.0 9.0 454.0 2762.0 0.0 8715.0 17.0 2545.0 4967.0 0

MA1136.1_rc_shift3 (FOSB::JUNB(var.2)_rc)
; oligos_7nt_mkv5_m33 versus MA1136.1_rc (FOSB::JUNB(var.2)_rc); m=17/32; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.462067; ---rTGACGTCAy------ ; cor=; Ncor= a 0 0 0 664.0 31.0 15.0 836.0 20.0 101.0 28.0 242.0 917.0 12.0 0 0 0 0 0 0 c 0 0 0 65.0 30.0 36.0 28.0 893.0 27.0 60.0 700.0 16.0 368.0 0 0 0 0 0 0 g 0 0 0 260.0 16.0 776.0 80.0 35.0 842.0 44.0 46.0 36.0 59.0 0 0 0 0 0 0 t 0 0 0 11.0 923.0 173.0 56.0 52.0 30.0 869.0 13.0 30.0 561.0 0 0 0 0 0 0

MA0004.1_rc_shift10 (Arnt_rc)
; oligos_7nt_mkv5_m33 versus MA0004.1_rc (Arnt_rc); m=18/32; ncol2=6; w=6; offset=5; strand=R; shift=10; score=0.457767; ----------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0 0 0 0

MA0663.1_shift8 (MLX)
; oligos_7nt_mkv5_m33 versus MA0663.1 (MLX); m=19/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.454971; --------rTCACGTGAt- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 177.0 0.0 3.0 234.0 0.0 1.0 2.0 2.0 240.0 23.0 0 c 0 0 0 0 0 0 0 0 4.0 17.0 251.0 0.0 257.0 0.0 1.0 0.0 9.0 84.0 0 g 0 0 0 0 0 0 0 0 110.0 61.0 3.0 6.0 0.0 558.0 1.0 555.0 35.0 6.0 0 t 0 0 0 0 0 0 0 0 41.0 322.0 4.0 0.0 0.0 1.0 315.0 5.0 16.0 235.0 0

MA0464.2_rc_shift8 (BHLHE40_rc)
; oligos_7nt_mkv5_m33 versus MA0464.2_rc (BHLHE40_rc); m=20/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.453743; --------gkCACGTGmb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2587.0 500.0 72.0 11222.0 0.0 32.0 77.0 14.0 6222.0 1447.0 0 c 0 0 0 0 0 0 0 0 1385.0 129.0 11222.0 87.0 11222.0 2.0 78.0 0.0 5000.0 2926.0 0 g 0 0 0 0 0 0 0 0 5706.0 5295.0 12.0 248.0 30.0 11222.0 130.0 11222.0 481.0 3025.0 0 t 0 0 0 0 0 0 0 0 1544.0 5927.0 4.0 167.0 66.0 23.0 11222.0 59.0 1391.0 3824.0 0

MA0656.1_shift2 (JDP2(var.2))
; oligos_7nt_mkv5_m33 versus MA0656.1 (JDP2(var.2)); m=21/32; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.451262; --gATGACGTCAyc----- ; cor=; Ncor= a 0 0 4260.0 24403.0 3.0 11.0 24403.0 5.0 587.0 15.0 1777.0 24403.0 47.0 4383.0 0 0 0 0 0 c 0 0 5483.0 1319.0 9.0 0.0 7.0 24403.0 5.0 24.0 24403.0 10.0 12119.0 12117.0 0 0 0 0 0 g 0 0 11036.0 1403.0 3.0 24403.0 6.0 6.0 24403.0 7.0 4.0 9.0 835.0 4124.0 0 0 0 0 0 t 0 0 3623.0 17.0 24403.0 1939.0 6.0 338.0 2.0 24403.0 1.0 0.0 12283.0 3778.0 0 0 0 0 0

MA0649.1_shift8 (HEY2)
; oligos_7nt_mkv5_m33 versus MA0649.1 (HEY2); m=22/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.447503; --------GrCACGTGyc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 107.0 651.0 84.0 1800.0 7.0 27.0 36.0 0.0 50.0 285.0 0 c 0 0 0 0 0 0 0 0 99.0 305.0 1800.0 0.0 1800.0 72.0 120.0 34.0 1047.0 869.0 0 g 0 0 0 0 0 0 0 0 1800.0 620.0 83.0 128.0 0.0 1800.0 0.0 1800.0 128.0 382.0 0 t 0 0 0 0 0 0 0 0 101.0 224.0 58.0 0.0 0.0 0.0 1800.0 30.0 753.0 264.0 0

MA1129.1_rc_shift3 (FOSL1::JUN(var.2)_rc)
; oligos_7nt_mkv5_m33 versus MA1129.1_rc (FOSL1::JUN(var.2)_rc); m=23/32; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.442954; ---rTgACGTcAy------ ; cor=; Ncor= a 0 0 0 641.0 30.0 35.0 827.0 24.0 95.0 43.0 240.0 919.0 26.0 0 0 0 0 0 0 c 0 0 0 71.0 31.0 58.0 27.0 847.0 38.0 106.0 672.0 24.0 266.0 0 0 0 0 0 0 g 0 0 0 264.0 22.0 670.0 105.0 36.0 845.0 26.0 56.0 30.0 69.0 0 0 0 0 0 0 t 0 0 0 24.0 917.0 238.0 41.0 93.0 22.0 825.0 33.0 28.0 639.0 0 0 0 0 0 0

MA0259.1_rc_shift9 (ARNT::HIF1A_rc)
; oligos_7nt_mkv5_m33 versus MA0259.1_rc (ARNT::HIF1A_rc); m=24/32; ncol2=8; w=7; offset=4; strand=R; shift=9; score=0.442807; ---------gCACGTvb-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.0 0.0 104.0 0.0 1.0 1.0 31.0 0.0 0 0 c 0 0 0 0 0 0 0 0 0 20.0 104.0 0.0 104.0 0.0 23.0 34.0 49.0 0 0 g 0 0 0 0 0 0 0 0 0 51.0 0.0 0.0 0.0 103.0 2.0 29.0 28.0 0 0 t 0 0 0 0 0 0 0 0 0 18.0 0.0 0.0 0.0 0.0 78.0 10.0 27.0 0 0

MA1099.2_shift8 (HES1)
; oligos_7nt_mkv5_m33 versus MA1099.2 (HES1); m=25/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.438123; --------ggCrCGTGbc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 3321.0 5858.0 464.0 9446.0 0.0 21.0 253.0 1.0 1126.0 2742.0 0 c 0 0 0 0 0 0 0 0 3492.0 2072.0 18526.0 0.0 18526.0 0.0 4057.0 0.0 6203.0 12513.0 0 g 0 0 0 0 0 0 0 0 18526.0 18526.0 0.0 9081.0 0.0 18526.0 0.0 18526.0 6360.0 6013.0 0 t 0 0 0 0 0 0 0 0 4239.0 8007.0 18.0 232.0 791.0 0.0 18526.0 53.0 4837.0 3216.0 0

MA0664.1_shift8 (MLXIPL)
; oligos_7nt_mkv5_m33 versus MA0664.1 (MLXIPL); m=26/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.435107; --------rtCACGTGat- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 345.0 126.0 0.0 411.0 2.0 20.0 0.0 0.0 356.0 138.0 0 c 0 0 0 0 0 0 0 0 31.0 28.0 448.0 0.0 452.0 2.0 0.0 0.0 110.0 181.0 0 g 0 0 0 0 0 0 0 0 220.0 133.0 11.0 2.0 12.0 735.0 3.0 727.0 87.0 53.0 0 t 0 0 0 0 0 0 0 0 113.0 468.0 0.0 5.0 0.0 0.0 562.0 0.0 113.0 442.0 0

MA0616.2_shift8 (HES2)
; oligos_7nt_mkv5_m33 versus MA0616.2 (HES2); m=27/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.434862; --------GgCACGTGyc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 775.0 1501.0 118.0 6455.0 0.0 0.0 0.0 53.0 512.0 966.0 0 c 0 0 0 0 0 0 0 0 1193.0 1107.0 8483.0 0.0 8483.0 0.0 1098.0 15.0 4634.0 4464.0 0 g 0 0 0 0 0 0 0 0 8483.0 8483.0 85.0 2028.0 0.0 8483.0 0.0 8483.0 1289.0 1735.0 0 t 0 0 0 0 0 0 0 0 798.0 1581.0 73.0 0.0 129.0 0.0 8483.0 0.0 3849.0 1319.0 0

MA0622.1_shift9 (Mlxip)
; oligos_7nt_mkv5_m33 versus MA0622.1 (Mlxip); m=28/32; ncol2=8; w=7; offset=4; strand=D; shift=9; score=0.416271; ---------bCACGTGk-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 53.0 0.0 999.0 0.0 0.0 0.0 0.0 188.0 0 0 c 0 0 0 0 0 0 0 0 0 263.0 999.0 0.0 999.0 0.0 0.0 0.0 63.0 0 0 g 0 0 0 0 0 0 0 0 0 421.0 0.0 0.0 0.0 999.0 0.0 999.0 250.0 0 0 t 0 0 0 0 0 0 0 0 0 263.0 0.0 0.0 0.0 0.0 999.0 0.0 499.0 0 0

MA0632.2_shift9 (TCFL5)
; oligos_7nt_mkv5_m33 versus MA0632.2 (TCFL5); m=29/32; ncol2=10; w=7; offset=4; strand=D; shift=9; score=0.416019; ---------kCrCGCGCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 2810.0 0.0 72543.0 0.0 1566.0 1765.0 3520.0 1593.0 72543.0 10588.0 c 0 0 0 0 0 0 0 0 0 10582.0 72543.0 0.0 72543.0 0.0 57092.0 657.0 72543.0 44394.0 47538.0 g 0 0 0 0 0 0 0 0 0 22297.0 0.0 29710.0 0.0 72543.0 0.0 72543.0 4594.0 19096.0 5747.0 t 0 0 0 0 0 0 0 0 0 36854.0 0.0 9359.0 1643.0 0.0 15451.0 0.0 635.0 25921.0 8670.0

MA0781.1_shift7 (PAX9)
; oligos_7nt_mkv5_m33 versus MA0781.1 (PAX9); m=30/32; ncol2=17; w=9; offset=2; strand=D; shift=7; score=0.409014; -------sGTCACGCwTSA ; cor=; Ncor= a 0 0 0 0 0 0 0 154.0 0.0 67.0 0.0 3241.0 0.0 0.0 0.0 1840.0 1.0 3.0 3083.0 c 0 0 0 0 0 0 0 2410.0 0.0 13.0 3775.0 71.0 3860.0 0.0 3695.0 83.0 68.0 1412.0 0.0 g 0 0 0 0 0 0 0 1176.0 3811.0 6.0 0.0 2.0 0.0 3945.0 727.0 13.0 0.0 3552.0 468.0 t 0 0 0 0 0 0 0 244.0 10.0 3107.0 171.0 1.0 267.0 0.0 0.0 1141.0 3188.0 3.0 0.0

MA0862.1_rc_shift4 (GMEB2_rc)
; oligos_7nt_mkv5_m33 versus MA0862.1_rc (GMEB2_rc); m=31/32; ncol2=8; w=7; offset=-1; strand=R; shift=4; score=0.408527; ----tTACGTaa------- ; cor=; Ncor= a 0 0 0 0 5.0 9.0 239.0 0.0 0.0 0.0 239.0 239.0 0 0 0 0 0 0 0 c 0 0 0 0 24.0 12.0 0.0 239.0 0.0 5.0 86.0 109.0 0 0 0 0 0 0 0 g 0 0 0 0 84.0 66.0 21.0 4.0 239.0 0.0 10.0 75.0 0 0 0 0 0 0 0 t 0 0 0 0 239.0 239.0 0.0 0.0 4.0 239.0 25.0 34.0 0 0 0 0 0 0 0

MA0779.1_shift7 (PAX1)
; oligos_7nt_mkv5_m33 versus MA0779.1 (PAX1); m=32/32; ncol2=17; w=9; offset=2; strand=D; shift=7; score=0.407913; -------sGTCACGCwTSA ; cor=; Ncor= a 0 0 0 0 0 0 0 314.0 3.0 234.0 3.0 3574.0 2.0 3.0 0.0 2215.0 11.0 1.0 3579.0 c 0 0 0 0 0 0 0 3157.0 0.0 80.0 4490.0 213.0 4489.0 2.0 4404.0 81.0 425.0 1769.0 2.0 g 0 0 0 0 0 0 0 1423.0 5266.0 0.0 1.0 2.0 0.0 5304.0 1017.0 43.0 2.0 4652.0 595.0 t 0 0 0 0 0 0 0 327.0 79.0 4396.0 475.0 0.0 651.0 3.0 0.0 1529.0 4290.0 54.0 0.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m33_shift5 (oligos_7nt_mkv5_m33oligos_7nt_mkv5_m33)				; oligos_7nt_mkv5_m33 (oligos_7nt_mkv5_m33oligos_7nt_mkv5_m33); m=0 (reference); ncol1=11; shift=5; ncol=19; -----srCGTCaCGss--- ; Alignment reference a 0 0 0 0 0 188 442 6 0 45 46 1089 1 3 166 234 0 0 0 c 0 0 0 0 0 677 405 1626 4 42 1345 172 1661 104 562 576 0 0 0 g 0 0 0 0 0 574 685 39 1666 21 234 378 8 1549 548 663 0 0 0 t 0 0 0 0 0 232 139 0 1 1563 46 32 1 15 395 198 0 0 0
MA0014.3_rc_shift5 (PAX5_rc)				; oligos_7nt_mkv5_m33 versus MA0014.3_rc (PAX5_rc); m=1/32; ncol2=12; w=11; offset=0; strand=R; shift=5; score=0.682342; -----vkGGTCACGCyy-- ; cor=; Ncor= a 0 0 0 0 0 387.0 318.0 144.0 18.0 60.0 4.0 1200.0 23.0 84.0 12.0 285.0 115.0 0 0 c 0 0 0 0 0 359.0 312.0 118.0 57.0 70.0 1355.0 30.0 1243.0 34.0 1231.0 354.0 578.0 0 0 g 0 0 0 0 0 403.0 405.0 1081.0 1305.0 39.0 37.0 88.0 35.0 1276.0 151.0 148.0 179.0 0 0 t 0 0 0 0 0 263.0 377.0 69.0 32.0 1243.0 16.0 94.0 111.0 18.0 18.0 625.0 540.0 0 0
MA0604.1_rc_shift5 (Atf1_rc)				; oligos_7nt_mkv5_m33 versus MA0604.1_rc (Atf1_rc); m=2/32; ncol2=8; w=8; offset=0; strand=R; shift=5; score=0.59207; -----tACGTCAy------ ; cor=; Ncor= a 0 0 0 0 0 100.0 712.0 0.0 0.0 0.0 175.0 960.0 65.0 0 0 0 0 0 0 c 0 0 0 0 0 163.0 0.0 993.0 0.0 0.0 803.0 0.0 387.0 0 0 0 0 0 0 g 0 0 0 0 0 138.0 198.0 0.0 1000.0 0.0 22.0 16.0 86.0 0 0 0 0 0 0 t 0 0 0 0 0 600.0 90.0 7.0 0.0 1000.0 0.0 24.0 462.0 0 0 0 0 0 0
MA0067.1_shift7 (Pax2)				; oligos_7nt_mkv5_m33 versus MA0067.1 (Pax2); m=3/32; ncol2=8; w=8; offset=2; strand=D; shift=7; score=0.574202; -------wgTCAykb---- ; cor=; Ncor= a 0 0 0 0 0 0 0 10.0 7.0 3.0 0.0 26.0 2.0 2.0 1.0 0 0 0 0 c 0 0 0 0 0 0 0 7.0 1.0 2.0 28.0 1.0 17.0 0.0 11.0 0 0 0 0 g 0 0 0 0 0 0 0 5.0 21.0 0.0 1.0 3.0 1.0 19.0 11.0 0 0 0 0 t 0 0 0 0 0 0 0 9.0 2.0 26.0 2.0 1.0 11.0 10.0 8.0 0 0 0 0
MA0831.2_rc_shift8 (TFE3_rc)				; oligos_7nt_mkv5_m33 versus MA0831.2_rc (TFE3_rc); m=4/32; ncol2=8; w=8; offset=3; strand=R; shift=8; score=0.573794; --------rTCACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 438.0 38.0 1.0 988.0 1.0 164.0 138.0 1.0 0 0 0 c 0 0 0 0 0 0 0 0 37.0 70.0 997.0 4.0 861.0 5.0 109.0 1.0 0 0 0 g 0 0 0 0 0 0 0 0 522.0 77.0 1.0 4.0 9.0 830.0 34.0 996.0 0 0 0 t 0 0 0 0 0 0 0 0 3.0 815.0 1.0 4.0 129.0 1.0 719.0 1.0 0 0 0
MA0603.1_shift7 (Arntl)				; oligos_7nt_mkv5_m33 versus MA0603.1 (Arntl); m=5/32; ncol2=10; w=9; offset=2; strand=D; shift=7; score=0.553426; -------dgTCACGTGh-- ; cor=; Ncor= a 0 0 0 0 0 0 0 251.0 246.0 62.0 3.0 953.0 2.0 48.0 54.0 9.0 255.0 0 0 c 0 0 0 0 0 0 0 229.0 125.0 44.0 997.0 16.0 965.0 3.0 58.0 4.0 331.0 0 0 g 0 0 0 0 0 0 0 261.0 558.0 143.0 0.0 10.0 9.0 946.0 51.0 938.0 146.0 0 0 t 0 0 0 0 0 0 0 259.0 71.0 752.0 0.0 21.0 24.0 3.0 837.0 48.0 268.0 0 0
MA0871.2_rc_shift7 (TFEC_rc)				; oligos_7nt_mkv5_m33 versus MA0871.2_rc (TFEC_rc); m=6/32; ncol2=11; w=9; offset=2; strand=R; shift=7; score=0.532662; -------gGTCACGTGsk- ; cor=; Ncor= a 0 0 0 0 0 0 0 1566.0 1052.0 47.0 0.0 7952.0 0.0 210.0 374.0 0.0 922.0 2725.0 0 c 0 0 0 0 0 0 0 1708.0 58.0 143.0 7952.0 0.0 7952.0 0.0 145.0 3.0 2302.0 2355.0 0 g 0 0 0 0 0 0 0 2828.0 6900.0 411.0 4.0 0.0 0.0 7952.0 0.0 7952.0 2887.0 4679.0 0 t 0 0 0 0 0 0 0 1850.0 17.0 7952.0 0.0 0.0 69.0 0.0 7952.0 0.0 1841.0 3273.0 0
MA1546.1_shift6 (PAX3(var.2))				; oligos_7nt_mkv5_m33 versus MA1546.1 (PAX3(var.2)); m=7/32; ncol2=16; w=10; offset=1; strand=D; shift=6; score=0.512505; ------ysGTCACGsywAT ; cor=; Ncor= a 0 0 0 0 0 0 203.0 112.0 1.0 181.0 9.0 1344.0 13.0 161.0 3.0 197.0 512.0 1344.0 50.0 c 0 0 0 0 0 0 515.0 880.0 2.0 79.0 1344.0 2.0 1344.0 1.0 836.0 414.0 228.0 152.0 43.0 g 0 0 0 0 0 0 216.0 464.0 1344.0 6.0 23.0 19.0 2.0 1344.0 508.0 127.0 138.0 353.0 24.0 t 0 0 0 0 0 0 411.0 167.0 126.0 1344.0 263.0 2.0 201.0 0.0 6.0 606.0 467.0 86.0 1344.0
MA0609.2_rc_shift0 (CREM_rc)				; oligos_7nt_mkv5_m33 versus MA0609.2_rc (CREM_rc); m=8/32; ncol2=16; w=11; offset=-5; strand=R; shift=0; score=0.501755; gcrgTGACGTCAcygc--- ; cor=; Ncor= a 3864.0 3965.0 5887.0 2936.0 561.0 433.0 15691.0 518.0 1582.0 401.0 672.0 15232.0 788.0 3764.0 3584.0 3800.0 0 0 0 c 4230.0 5523.0 2910.0 2156.0 730.0 1039.0 314.0 14026.0 897.0 619.0 14883.0 506.0 11144.0 4474.0 3956.0 5132.0 0 0 0 g 5132.0 3957.0 4473.0 11146.0 508.0 14883.0 622.0 901.0 14031.0 313.0 1038.0 730.0 2159.0 2908.0 5521.0 4230.0 0 0 0 t 3801.0 3582.0 3757.0 789.0 15228.0 672.0 400.0 1582.0 517.0 15694.0 434.0 559.0 2936.0 5881.0 3966.0 3865.0 0 0 0
MA0636.1_rc_shift8 (BHLHE41_rc)				; oligos_7nt_mkv5_m33 versus MA0636.1_rc (BHLHE41_rc); m=9/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.497226; --------gTCACGTGAy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1963.0 23.0 0.0 5574.0 0.0 5.0 3.0 1.0 5574.0 59.0 0 c 0 0 0 0 0 0 0 0 985.0 7.0 5574.0 16.0 5574.0 1.0 21.0 3.0 1831.0 5574.0 0 g 0 0 0 0 0 0 0 0 5574.0 1229.0 1.0 16.0 1.0 5574.0 12.0 5574.0 17.0 1046.0 0 t 0 0 0 0 0 0 0 0 74.0 5574.0 1.0 19.0 2.0 1.0 5574.0 2.0 98.0 2894.0 0
MA1464.1_shift8 (ARNT2)				; oligos_7nt_mkv5_m33 versus MA1464.1 (ARNT2); m=10/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.485889; --------rtCACGTGms- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11781.0 9572.0 505.0 40622.0 0.0 84.0 651.0 14.0 18559.0 7892.0 0 c 0 0 0 0 0 0 0 0 4265.0 4901.0 40622.0 122.0 40622.0 0.0 932.0 0.0 22063.0 12448.0 0 g 0 0 0 0 0 0 0 0 28841.0 9525.0 115.0 532.0 0.0 40622.0 111.0 40622.0 3912.0 12031.0 0 t 0 0 0 0 0 0 0 0 1951.0 40622.0 0.0 460.0 148.0 0.0 40622.0 971.0 7159.0 8251.0 0
MA0828.1_rc_shift8 (SREBF2(var.2)_rc)				; oligos_7nt_mkv5_m33 versus MA0828.1_rc (SREBF2(var.2)_rc); m=11/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.485442; --------rTCACGTGAT- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1843.0 122.0 8.0 3957.0 0.0 11.0 12.0 1.0 3957.0 13.0 0 c 0 0 0 0 0 0 0 0 104.0 39.0 3957.0 0.0 3957.0 82.0 75.0 16.0 16.0 1059.0 0 g 0 0 0 0 0 0 0 0 2114.0 8.0 13.0 240.0 341.0 3957.0 2.0 3957.0 130.0 284.0 0 t 0 0 0 0 0 0 0 0 20.0 3957.0 3.0 44.0 21.0 3.0 3957.0 7.0 385.0 2898.0 0
MA1474.1_shift2 (CREB3L4)				; oligos_7nt_mkv5_m33 versus MA1474.1 (CREB3L4); m=12/32; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.477488; --ygCCACGTCAyc----- ; cor=; Ncor= a 0 0 876.0 828.0 1118.0 260.0 3891.0 13.0 306.0 53.0 500.0 3891.0 284.0 664.0 0 0 0 0 0 c 0 0 1802.0 247.0 3891.0 3891.0 50.0 3891.0 65.0 301.0 3891.0 515.0 2584.0 1740.0 0 0 0 0 0 g 0 0 959.0 3891.0 165.0 112.0 208.0 20.0 3891.0 63.0 690.0 769.0 729.0 788.0 0 0 0 0 0 t 0 0 2090.0 1403.0 246.0 221.0 8.0 130.0 0.0 3891.0 279.0 275.0 1308.0 698.0 0 0 0 0 0
MA1475.1_shift2 (CREB3L4(var.2))				; oligos_7nt_mkv5_m33 versus MA1475.1 (CREB3L4(var.2)); m=13/32; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.477459; --grTGACGTCAyc----- ; cor=; Ncor= a 0 0 229.0 504.0 0.0 35.0 1293.0 0.0 81.0 16.0 176.0 1293.0 116.0 234.0 0 0 0 0 0 c 0 0 224.0 221.0 138.0 265.0 27.0 1293.0 3.0 100.0 1293.0 35.0 748.0 582.0 0 0 0 0 0 g 0 0 570.0 790.0 48.0 1293.0 83.0 6.0 1293.0 36.0 227.0 153.0 282.0 265.0 0 0 0 0 0 t 0 0 270.0 75.0 1293.0 258.0 39.0 43.0 0.0 1293.0 59.0 40.0 546.0 212.0 0 0 0 0 0
MA1143.1_rc_shift3 (FOSL1::JUND(var.2)_rc)				; oligos_7nt_mkv5_m33 versus MA1143.1_rc (FOSL1::JUND(var.2)_rc); m=14/32; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.473095; ---rtkrcGTCAy------ ; cor=; Ncor= a 0 0 0 394.0 188.0 41.0 582.0 176.0 68.0 44.0 82.0 870.0 40.0 0 0 0 0 0 0 c 0 0 0 82.0 100.0 83.0 39.0 649.0 64.0 41.0 777.0 44.0 324.0 0 0 0 0 0 0 g 0 0 0 401.0 66.0 330.0 262.0 59.0 835.0 45.0 101.0 50.0 75.0 0 0 0 0 0 0 t 0 0 0 123.0 645.0 546.0 117.0 116.0 32.0 870.0 39.0 36.0 561.0 0 0 0 0 0 0
MA0006.1_rc_shift10 (Ahr::Arnt_rc)				; oligos_7nt_mkv5_m33 versus MA0006.1_rc (Ahr::Arnt_rc); m=15/32; ncol2=6; w=6; offset=5; strand=R; shift=10; score=0.468327; ----------CACGCr--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 11.0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 2.0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 8.0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 3.0 0 0 0
MA0692.1_rc_shift8 (TFEB_rc)				; oligos_7nt_mkv5_m33 versus MA0692.1_rc (TFEB_rc); m=16/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.465926; --------rTCACGTGry- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2826.0 807.0 11.0 8715.0 5.0 1155.0 274.0 3.0 8715.0 343.0 0 c 0 0 0 0 0 0 0 0 558.0 872.0 8715.0 150.0 8715.0 83.0 62.0 0.0 2731.0 3748.0 0 g 0 0 0 0 0 0 0 0 5889.0 2342.0 10.0 169.0 288.0 8715.0 286.0 8715.0 4936.0 1553.0 0 t 0 0 0 0 0 0 0 0 283.0 8715.0 9.0 454.0 2762.0 0.0 8715.0 17.0 2545.0 4967.0 0
MA1136.1_rc_shift3 (FOSB::JUNB(var.2)_rc)				; oligos_7nt_mkv5_m33 versus MA1136.1_rc (FOSB::JUNB(var.2)_rc); m=17/32; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.462067; ---rTGACGTCAy------ ; cor=; Ncor= a 0 0 0 664.0 31.0 15.0 836.0 20.0 101.0 28.0 242.0 917.0 12.0 0 0 0 0 0 0 c 0 0 0 65.0 30.0 36.0 28.0 893.0 27.0 60.0 700.0 16.0 368.0 0 0 0 0 0 0 g 0 0 0 260.0 16.0 776.0 80.0 35.0 842.0 44.0 46.0 36.0 59.0 0 0 0 0 0 0 t 0 0 0 11.0 923.0 173.0 56.0 52.0 30.0 869.0 13.0 30.0 561.0 0 0 0 0 0 0
MA0004.1_rc_shift10 (Arnt_rc)				; oligos_7nt_mkv5_m33 versus MA0004.1_rc (Arnt_rc); m=18/32; ncol2=6; w=6; offset=5; strand=R; shift=10; score=0.457767; ----------CACGTG--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0 0 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 0 0 0 t 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0 0 0 0
MA0663.1_shift8 (MLX)				; oligos_7nt_mkv5_m33 versus MA0663.1 (MLX); m=19/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.454971; --------rTCACGTGAt- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 177.0 0.0 3.0 234.0 0.0 1.0 2.0 2.0 240.0 23.0 0 c 0 0 0 0 0 0 0 0 4.0 17.0 251.0 0.0 257.0 0.0 1.0 0.0 9.0 84.0 0 g 0 0 0 0 0 0 0 0 110.0 61.0 3.0 6.0 0.0 558.0 1.0 555.0 35.0 6.0 0 t 0 0 0 0 0 0 0 0 41.0 322.0 4.0 0.0 0.0 1.0 315.0 5.0 16.0 235.0 0
MA0464.2_rc_shift8 (BHLHE40_rc)				; oligos_7nt_mkv5_m33 versus MA0464.2_rc (BHLHE40_rc); m=20/32; ncol2=10; w=8; offset=3; strand=R; shift=8; score=0.453743; --------gkCACGTGmb- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2587.0 500.0 72.0 11222.0 0.0 32.0 77.0 14.0 6222.0 1447.0 0 c 0 0 0 0 0 0 0 0 1385.0 129.0 11222.0 87.0 11222.0 2.0 78.0 0.0 5000.0 2926.0 0 g 0 0 0 0 0 0 0 0 5706.0 5295.0 12.0 248.0 30.0 11222.0 130.0 11222.0 481.0 3025.0 0 t 0 0 0 0 0 0 0 0 1544.0 5927.0 4.0 167.0 66.0 23.0 11222.0 59.0 1391.0 3824.0 0
MA0656.1_shift2 (JDP2(var.2))				; oligos_7nt_mkv5_m33 versus MA0656.1 (JDP2(var.2)); m=21/32; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.451262; --gATGACGTCAyc----- ; cor=; Ncor= a 0 0 4260.0 24403.0 3.0 11.0 24403.0 5.0 587.0 15.0 1777.0 24403.0 47.0 4383.0 0 0 0 0 0 c 0 0 5483.0 1319.0 9.0 0.0 7.0 24403.0 5.0 24.0 24403.0 10.0 12119.0 12117.0 0 0 0 0 0 g 0 0 11036.0 1403.0 3.0 24403.0 6.0 6.0 24403.0 7.0 4.0 9.0 835.0 4124.0 0 0 0 0 0 t 0 0 3623.0 17.0 24403.0 1939.0 6.0 338.0 2.0 24403.0 1.0 0.0 12283.0 3778.0 0 0 0 0 0
MA0649.1_shift8 (HEY2)				; oligos_7nt_mkv5_m33 versus MA0649.1 (HEY2); m=22/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.447503; --------GrCACGTGyc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 107.0 651.0 84.0 1800.0 7.0 27.0 36.0 0.0 50.0 285.0 0 c 0 0 0 0 0 0 0 0 99.0 305.0 1800.0 0.0 1800.0 72.0 120.0 34.0 1047.0 869.0 0 g 0 0 0 0 0 0 0 0 1800.0 620.0 83.0 128.0 0.0 1800.0 0.0 1800.0 128.0 382.0 0 t 0 0 0 0 0 0 0 0 101.0 224.0 58.0 0.0 0.0 0.0 1800.0 30.0 753.0 264.0 0
MA1129.1_rc_shift3 (FOSL1::JUN(var.2)_rc)				; oligos_7nt_mkv5_m33 versus MA1129.1_rc (FOSL1::JUN(var.2)_rc); m=23/32; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.442954; ---rTgACGTcAy------ ; cor=; Ncor= a 0 0 0 641.0 30.0 35.0 827.0 24.0 95.0 43.0 240.0 919.0 26.0 0 0 0 0 0 0 c 0 0 0 71.0 31.0 58.0 27.0 847.0 38.0 106.0 672.0 24.0 266.0 0 0 0 0 0 0 g 0 0 0 264.0 22.0 670.0 105.0 36.0 845.0 26.0 56.0 30.0 69.0 0 0 0 0 0 0 t 0 0 0 24.0 917.0 238.0 41.0 93.0 22.0 825.0 33.0 28.0 639.0 0 0 0 0 0 0
MA0259.1_rc_shift9 (ARNT::HIF1A_rc)				; oligos_7nt_mkv5_m33 versus MA0259.1_rc (ARNT::HIF1A_rc); m=24/32; ncol2=8; w=7; offset=4; strand=R; shift=9; score=0.442807; ---------gCACGTvb-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 15.0 0.0 104.0 0.0 1.0 1.0 31.0 0.0 0 0 c 0 0 0 0 0 0 0 0 0 20.0 104.0 0.0 104.0 0.0 23.0 34.0 49.0 0 0 g 0 0 0 0 0 0 0 0 0 51.0 0.0 0.0 0.0 103.0 2.0 29.0 28.0 0 0 t 0 0 0 0 0 0 0 0 0 18.0 0.0 0.0 0.0 0.0 78.0 10.0 27.0 0 0
MA1099.2_shift8 (HES1)				; oligos_7nt_mkv5_m33 versus MA1099.2 (HES1); m=25/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.438123; --------ggCrCGTGbc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 3321.0 5858.0 464.0 9446.0 0.0 21.0 253.0 1.0 1126.0 2742.0 0 c 0 0 0 0 0 0 0 0 3492.0 2072.0 18526.0 0.0 18526.0 0.0 4057.0 0.0 6203.0 12513.0 0 g 0 0 0 0 0 0 0 0 18526.0 18526.0 0.0 9081.0 0.0 18526.0 0.0 18526.0 6360.0 6013.0 0 t 0 0 0 0 0 0 0 0 4239.0 8007.0 18.0 232.0 791.0 0.0 18526.0 53.0 4837.0 3216.0 0
MA0664.1_shift8 (MLXIPL)				; oligos_7nt_mkv5_m33 versus MA0664.1 (MLXIPL); m=26/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.435107; --------rtCACGTGat- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 345.0 126.0 0.0 411.0 2.0 20.0 0.0 0.0 356.0 138.0 0 c 0 0 0 0 0 0 0 0 31.0 28.0 448.0 0.0 452.0 2.0 0.0 0.0 110.0 181.0 0 g 0 0 0 0 0 0 0 0 220.0 133.0 11.0 2.0 12.0 735.0 3.0 727.0 87.0 53.0 0 t 0 0 0 0 0 0 0 0 113.0 468.0 0.0 5.0 0.0 0.0 562.0 0.0 113.0 442.0 0
MA0616.2_shift8 (HES2)				; oligos_7nt_mkv5_m33 versus MA0616.2 (HES2); m=27/32; ncol2=10; w=8; offset=3; strand=D; shift=8; score=0.434862; --------GgCACGTGyc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 775.0 1501.0 118.0 6455.0 0.0 0.0 0.0 53.0 512.0 966.0 0 c 0 0 0 0 0 0 0 0 1193.0 1107.0 8483.0 0.0 8483.0 0.0 1098.0 15.0 4634.0 4464.0 0 g 0 0 0 0 0 0 0 0 8483.0 8483.0 85.0 2028.0 0.0 8483.0 0.0 8483.0 1289.0 1735.0 0 t 0 0 0 0 0 0 0 0 798.0 1581.0 73.0 0.0 129.0 0.0 8483.0 0.0 3849.0 1319.0 0
MA0622.1_shift9 (Mlxip)				; oligos_7nt_mkv5_m33 versus MA0622.1 (Mlxip); m=28/32; ncol2=8; w=7; offset=4; strand=D; shift=9; score=0.416271; ---------bCACGTGk-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 53.0 0.0 999.0 0.0 0.0 0.0 0.0 188.0 0 0 c 0 0 0 0 0 0 0 0 0 263.0 999.0 0.0 999.0 0.0 0.0 0.0 63.0 0 0 g 0 0 0 0 0 0 0 0 0 421.0 0.0 0.0 0.0 999.0 0.0 999.0 250.0 0 0 t 0 0 0 0 0 0 0 0 0 263.0 0.0 0.0 0.0 0.0 999.0 0.0 499.0 0 0
MA0632.2_shift9 (TCFL5)				; oligos_7nt_mkv5_m33 versus MA0632.2 (TCFL5); m=29/32; ncol2=10; w=7; offset=4; strand=D; shift=9; score=0.416019; ---------kCrCGCGCmc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 2810.0 0.0 72543.0 0.0 1566.0 1765.0 3520.0 1593.0 72543.0 10588.0 c 0 0 0 0 0 0 0 0 0 10582.0 72543.0 0.0 72543.0 0.0 57092.0 657.0 72543.0 44394.0 47538.0 g 0 0 0 0 0 0 0 0 0 22297.0 0.0 29710.0 0.0 72543.0 0.0 72543.0 4594.0 19096.0 5747.0 t 0 0 0 0 0 0 0 0 0 36854.0 0.0 9359.0 1643.0 0.0 15451.0 0.0 635.0 25921.0 8670.0
MA0781.1_shift7 (PAX9)				; oligos_7nt_mkv5_m33 versus MA0781.1 (PAX9); m=30/32; ncol2=17; w=9; offset=2; strand=D; shift=7; score=0.409014; -------sGTCACGCwTSA ; cor=; Ncor= a 0 0 0 0 0 0 0 154.0 0.0 67.0 0.0 3241.0 0.0 0.0 0.0 1840.0 1.0 3.0 3083.0 c 0 0 0 0 0 0 0 2410.0 0.0 13.0 3775.0 71.0 3860.0 0.0 3695.0 83.0 68.0 1412.0 0.0 g 0 0 0 0 0 0 0 1176.0 3811.0 6.0 0.0 2.0 0.0 3945.0 727.0 13.0 0.0 3552.0 468.0 t 0 0 0 0 0 0 0 244.0 10.0 3107.0 171.0 1.0 267.0 0.0 0.0 1141.0 3188.0 3.0 0.0
MA0862.1_rc_shift4 (GMEB2_rc)				; oligos_7nt_mkv5_m33 versus MA0862.1_rc (GMEB2_rc); m=31/32; ncol2=8; w=7; offset=-1; strand=R; shift=4; score=0.408527; ----tTACGTaa------- ; cor=; Ncor= a 0 0 0 0 5.0 9.0 239.0 0.0 0.0 0.0 239.0 239.0 0 0 0 0 0 0 0 c 0 0 0 0 24.0 12.0 0.0 239.0 0.0 5.0 86.0 109.0 0 0 0 0 0 0 0 g 0 0 0 0 84.0 66.0 21.0 4.0 239.0 0.0 10.0 75.0 0 0 0 0 0 0 0 t 0 0 0 0 239.0 239.0 0.0 0.0 4.0 239.0 25.0 34.0 0 0 0 0 0 0 0
MA0779.1_shift7 (PAX1)				; oligos_7nt_mkv5_m33 versus MA0779.1 (PAX1); m=32/32; ncol2=17; w=9; offset=2; strand=D; shift=7; score=0.407913; -------sGTCACGCwTSA ; cor=; Ncor= a 0 0 0 0 0 0 0 314.0 3.0 234.0 3.0 3574.0 2.0 3.0 0.0 2215.0 11.0 1.0 3579.0 c 0 0 0 0 0 0 0 3157.0 0.0 80.0 4490.0 213.0 4489.0 2.0 4404.0 81.0 425.0 1769.0 2.0 g 0 0 0 0 0 0 0 1423.0 5266.0 0.0 1.0 2.0 0.0 5304.0 1017.0 43.0 2.0 4652.0 595.0 t 0 0 0 0 0 0 0 327.0 79.0 4396.0 475.0 0.0 651.0 3.0 0.0 1529.0 4290.0 54.0 0.0