One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m37/peak-motifs_oligos_7nt_mkv5_m37.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m37/peak-motifs_oligos_7nt_mkv5_m37_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m37_shift2 ; 15 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m37_shift2 (oligos_7nt_mkv5_m37oligos_7nt_mkv5_m37)
; oligos_7nt_mkv5_m37 (oligos_7nt_mkv5_m37oligos_7nt_mkv5_m37); m=0 (reference); ncol1=12; shift=2; ncol=20; --csTCACCTCCss------ ; Alignment reference a 0 0 317 250 30 60 1563 16 47 36 40 16 225 309 0 0 0 0 0 0 c 0 0 692 469 90 1613 58 1685 1471 24 1682 1644 569 608 0 0 0 0 0 0 g 0 0 400 738 44 46 126 8 121 120 13 95 661 534 0 0 0 0 0 0 t 0 0 362 314 1607 52 24 62 132 1591 36 16 316 320 0 0 0 0 0 0

MA1652.1_rc_shift1 (ZKSCAN5_rc)
; oligos_7nt_mkv5_m37 versus MA1652.1_rc (ZKSCAN5_rc); m=1/14; ncol2=14; w=12; offset=-1; strand=R; shift=1; score=0.799417; -yycTCACyTCCtcy----- ; cor=; Ncor= a 0 537.0 477.0 548.0 25.0 9.0 3092.0 49.0 27.0 19.0 26.0 50.0 701.0 604.0 660.0 0 0 0 0 0 c 0 1052.0 1078.0 2034.0 62.0 3251.0 76.0 3149.0 1827.0 47.0 3236.0 3111.0 801.0 1197.0 1161.0 0 0 0 0 0 g 0 569.0 504.0 370.0 41.0 24.0 86.0 37.0 27.0 62.0 27.0 30.0 315.0 704.0 636.0 0 0 0 0 0 t 0 1169.0 1268.0 375.0 3199.0 43.0 73.0 92.0 1446.0 3199.0 38.0 136.0 1510.0 822.0 870.0 0 0 0 0 0

MA1522.1_shift3 (MAZ)
; oligos_7nt_mkv5_m37 versus MA1522.1 (MAZ); m=2/14; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.678682; ---ssCCCCTCCcc------ ; cor=; Ncor= a 0 0 0 2480.0 1819.0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 2016.0 0 0 0 0 0 0 c 0 0 0 5198.0 5068.0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 6775.0 0 0 0 0 0 0 g 0 0 0 4277.0 5163.0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 2539.0 0 0 0 0 0 0 t 0 0 0 3108.0 3013.0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 3733.0 0 0 0 0 0 0

MA1648.1_shift3 (TCF12(var.2))
; oligos_7nt_mkv5_m37 versus MA1648.1 (TCF12(var.2)); m=3/14; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.659621; ---ssCACCTGCys------ ; cor=; Ncor= a 0 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 0 0 0 0 0 c 0 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 0 0 0 0 0 g 0 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 0 0 0 0 0 t 0 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0 0 0 0 0 0

MA0522.3_shift3 (TCF3)
; oligos_7nt_mkv5_m37 versus MA0522.3 (TCF3); m=4/14; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.657538; ---svCACCTGCss------ ; cor=; Ncor= a 0 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 0 0 0 0 0 c 0 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 0 0 0 0 0 g 0 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 0 0 0 0 0 t 0 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0 0 0 0 0 0

MA1653.1_shift3 (ZNF148)
; oligos_7nt_mkv5_m37 versus MA1653.1 (ZNF148); m=5/14; ncol2=12; w=11; offset=1; strand=D; shift=3; score=0.606787; ---ysCCCCTCCCcc----- ; cor=; Ncor= a 0 0 0 1399.0 1263.0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 0 0 0 0 0 c 0 0 0 4593.0 4057.0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 0 0 0 0 0 g 0 0 0 2241.0 3215.0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 0 0 0 0 0 t 0 0 0 2966.0 2664.0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0 0 0 0 0 0

MA0081.2_shift2 (SPIB)
; oligos_7nt_mkv5_m37 versus MA0081.2 (SPIB); m=6/14; ncol2=16; w=12; offset=0; strand=D; shift=2; score=0.559676; --tytCACTTCCTCttty-- ; cor=; Ncor= a 0 0 5347.0 4682.0 2179.0 379.0 24319.0 239.0 450.0 190.0 206.0 275.0 865.0 1020.0 4963.0 2838.0 4159.0 4026.0 0 0 c 0 0 5797.0 8293.0 6429.0 23971.0 619.0 22730.0 236.0 200.0 26145.0 25492.0 4517.0 20113.0 3922.0 5425.0 6029.0 8589.0 0 0 g 0 0 4026.0 4544.0 3193.0 1721.0 669.0 2516.0 157.0 243.0 153.0 129.0 1829.0 2316.0 781.0 2087.0 2409.0 4165.0 0 0 t 0 0 11760.0 9411.0 15129.0 859.0 1323.0 1445.0 26087.0 26297.0 426.0 1034.0 19719.0 3481.0 17264.0 16580.0 14333.0 10150.0 0 0

MA0765.2_shift4 (ETV5)
; oligos_7nt_mkv5_m37 versus MA0765.2 (ETV5); m=7/14; ncol2=11; w=10; offset=2; strand=D; shift=4; score=0.546349; ----bcACTTCCGsy----- ; cor=; Ncor= a 0 0 0 0 4531.0 4782.0 19410.0 312.0 1043.0 222.0 243.0 367.0 1295.0 3017.0 4679.0 0 0 0 0 0 c 0 0 0 0 8003.0 10307.0 2443.0 24041.0 1145.0 956.0 25484.0 25061.0 1743.0 6921.0 8378.0 0 0 0 0 0 g 0 0 0 0 7117.0 6129.0 3017.0 994.0 408.0 816.0 336.0 498.0 18757.0 11944.0 6039.0 0 0 0 0 0 t 0 0 0 0 6667.0 5100.0 1448.0 971.0 23722.0 24324.0 255.0 392.0 4523.0 4436.0 7222.0 0 0 0 0 0

MA0645.1_rc_shift5 (ETV6_rc)
; oligos_7nt_mkv5_m37 versus MA0645.1_rc (ETV6_rc); m=8/14; ncol2=10; w=9; offset=3; strand=R; shift=5; score=0.522999; -----yACTTCCGsk----- ; cor=; Ncor= a 0 0 0 0 0 1091.0 6687.0 0.0 41.0 0.0 22.0 13.0 308.0 441.0 2002.0 0 0 0 0 0 c 0 0 0 0 0 3205.0 233.0 6687.0 32.0 7.0 6687.0 6687.0 397.0 4292.0 4684.0 0 0 0 0 0 g 0 0 0 0 0 342.0 834.0 52.0 13.0 0.0 0.0 0.0 6379.0 2394.0 6562.0 0 0 0 0 0 t 0 0 0 0 0 2049.0 184.0 768.0 6687.0 6687.0 21.0 7.0 1476.0 342.0 9414.0 0 0 0 0 0

MA0763.1_rc_shift5 (ETV3_rc)
; oligos_7nt_mkv5_m37 versus MA0763.1_rc (ETV3_rc); m=9/14; ncol2=10; w=9; offset=3; strand=R; shift=5; score=0.497786; -----cACTTCCGGT----- ; cor=; Ncor= a 0 0 0 0 0 25.0 215.0 0.0 71.0 4.0 16.0 14.0 13.0 31.0 24.0 0 0 0 0 0 c 0 0 0 0 0 98.0 7.0 215.0 0.0 0.0 215.0 215.0 0.0 14.0 38.0 0 0 0 0 0 g 0 0 0 0 0 41.0 32.0 14.0 0.0 8.0 0.0 0.0 215.0 215.0 27.0 0 0 0 0 0 t 0 0 0 0 0 52.0 0.0 58.0 215.0 215.0 0.0 0.0 9.0 18.0 215.0 0 0 0 0 0

MA0760.1_rc_shift5 (ERF_rc)
; oligos_7nt_mkv5_m37 versus MA0760.1_rc (ERF_rc); m=10/14; ncol2=10; w=9; offset=3; strand=R; shift=5; score=0.485222; -----yAyTTCCGGT----- ; cor=; Ncor= a 0 0 0 0 0 22.0 205.0 0.0 30.0 2.0 0.0 0.0 0.0 34.0 3.0 0 0 0 0 0 c 0 0 0 0 0 92.0 11.0 205.0 0.0 3.0 205.0 205.0 6.0 8.0 33.0 0 0 0 0 0 g 0 0 0 0 0 28.0 41.0 17.0 0.0 3.0 3.0 0.0 205.0 205.0 4.0 0 0 0 0 0 t 0 0 0 0 0 62.0 0.0 82.0 205.0 205.0 0.0 0.0 25.0 7.0 205.0 0 0 0 0 0

MA0807.1_rc_shift2 (TBX5_rc)
; oligos_7nt_mkv5_m37 versus MA0807.1_rc (TBX5_rc); m=11/14; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.482951; --TmACACCT---------- ; cor=; Ncor= a 0 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 0 0 0 0 0 c 0 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 0 0 0 0 0 g 0 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 0 0 0 0 0 t 0 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0 0 0 0 0 0

MA0806.1_rc_shift2 (TBX4_rc)
; oligos_7nt_mkv5_m37 versus MA0806.1_rc (TBX4_rc); m=12/14; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.47316; --TcACACCT---------- ; cor=; Ncor= a 0 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 0 0 0 0 0 0 0 0 c 0 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 0 0 0 0 0 0 0 0 g 0 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 0 0 0 0 0 0 0 0 t 0 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0 0 0 0 0 0 0 0 0

MA0080.5_rc_shift0 (SPI1_rc)
; oligos_7nt_mkv5_m37 versus MA0080.5_rc (SPI1_rc); m=13/14; ncol2=20; w=12; offset=-2; strand=R; shift=0; score=0.434573; wyttTCACTTCCTCTttyyy ; cor=; Ncor= a 37146.0 32717.0 27628.0 21682.0 10315.0 5993.0 108324.0 2191.0 3215.0 1280.0 1287.0 1702.0 4147.0 6119.0 17071.0 13450.0 17055.0 21525.0 29424.0 30010.0 c 28335.0 34829.0 29188.0 30577.0 20647.0 103485.0 7231.0 109802.0 1308.0 1407.0 127639.0 125703.0 12544.0 100825.0 13479.0 25580.0 25893.0 37341.0 34277.0 38405.0 g 24884.0 26246.0 16927.0 20113.0 11316.0 12697.0 3717.0 9931.0 792.0 1339.0 954.0 568.0 3425.0 10958.0 2914.0 12269.0 11424.0 20183.0 21262.0 22587.0 t 42838.0 39411.0 59460.0 60831.0 90925.0 11028.0 13931.0 11279.0 127888.0 129177.0 3323.0 5230.0 113087.0 15301.0 99739.0 81904.0 78831.0 54154.0 48240.0 42201.0

MA0641.1_rc_shift5 (ELF4_rc)
; oligos_7nt_mkv5_m37 versus MA0641.1_rc (ELF4_rc); m=14/14; ncol2=12; w=9; offset=3; strand=R; shift=5; score=0.428069; -----yACTTCCGGGTt--- ; cor=; Ncor= a 0 0 0 0 0 113.0 979.0 6.0 4.0 2.0 2.0 0.0 0.0 1.0 106.0 149.0 192.0 0 0 0 c 0 0 0 0 0 463.0 28.0 1207.0 2.0 2.0 1226.0 1226.0 6.0 105.0 75.0 15.0 160.0 0 0 0 g 0 0 0 0 0 83.0 56.0 18.0 5.0 0.0 0.0 0.0 997.0 990.0 930.0 73.0 109.0 0 0 0 t 0 0 0 0 0 403.0 4.0 43.0 737.0 739.0 0.0 1.0 54.0 17.0 198.0 705.0 598.0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m37_shift2 (oligos_7nt_mkv5_m37oligos_7nt_mkv5_m37)				; oligos_7nt_mkv5_m37 (oligos_7nt_mkv5_m37oligos_7nt_mkv5_m37); m=0 (reference); ncol1=12; shift=2; ncol=20; --csTCACCTCCss------ ; Alignment reference a 0 0 317 250 30 60 1563 16 47 36 40 16 225 309 0 0 0 0 0 0 c 0 0 692 469 90 1613 58 1685 1471 24 1682 1644 569 608 0 0 0 0 0 0 g 0 0 400 738 44 46 126 8 121 120 13 95 661 534 0 0 0 0 0 0 t 0 0 362 314 1607 52 24 62 132 1591 36 16 316 320 0 0 0 0 0 0
MA1652.1_rc_shift1 (ZKSCAN5_rc)				; oligos_7nt_mkv5_m37 versus MA1652.1_rc (ZKSCAN5_rc); m=1/14; ncol2=14; w=12; offset=-1; strand=R; shift=1; score=0.799417; -yycTCACyTCCtcy----- ; cor=; Ncor= a 0 537.0 477.0 548.0 25.0 9.0 3092.0 49.0 27.0 19.0 26.0 50.0 701.0 604.0 660.0 0 0 0 0 0 c 0 1052.0 1078.0 2034.0 62.0 3251.0 76.0 3149.0 1827.0 47.0 3236.0 3111.0 801.0 1197.0 1161.0 0 0 0 0 0 g 0 569.0 504.0 370.0 41.0 24.0 86.0 37.0 27.0 62.0 27.0 30.0 315.0 704.0 636.0 0 0 0 0 0 t 0 1169.0 1268.0 375.0 3199.0 43.0 73.0 92.0 1446.0 3199.0 38.0 136.0 1510.0 822.0 870.0 0 0 0 0 0
MA1522.1_shift3 (MAZ)				; oligos_7nt_mkv5_m37 versus MA1522.1 (MAZ); m=2/14; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.678682; ---ssCCCCTCCcc------ ; cor=; Ncor= a 0 0 0 2480.0 1819.0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 2016.0 0 0 0 0 0 0 c 0 0 0 5198.0 5068.0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 6775.0 0 0 0 0 0 0 g 0 0 0 4277.0 5163.0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 2539.0 0 0 0 0 0 0 t 0 0 0 3108.0 3013.0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 3733.0 0 0 0 0 0 0
MA1648.1_shift3 (TCF12(var.2))				; oligos_7nt_mkv5_m37 versus MA1648.1 (TCF12(var.2)); m=3/14; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.659621; ---ssCACCTGCys------ ; cor=; Ncor= a 0 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 0 0 0 0 0 c 0 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 0 0 0 0 0 g 0 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 0 0 0 0 0 t 0 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0 0 0 0 0 0
MA0522.3_shift3 (TCF3)				; oligos_7nt_mkv5_m37 versus MA0522.3 (TCF3); m=4/14; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.657538; ---svCACCTGCss------ ; cor=; Ncor= a 0 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 0 0 0 0 0 c 0 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 0 0 0 0 0 g 0 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 0 0 0 0 0 t 0 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0 0 0 0 0 0
MA1653.1_shift3 (ZNF148)				; oligos_7nt_mkv5_m37 versus MA1653.1 (ZNF148); m=5/14; ncol2=12; w=11; offset=1; strand=D; shift=3; score=0.606787; ---ysCCCCTCCCcc----- ; cor=; Ncor= a 0 0 0 1399.0 1263.0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 0 0 0 0 0 c 0 0 0 4593.0 4057.0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 0 0 0 0 0 g 0 0 0 2241.0 3215.0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 0 0 0 0 0 t 0 0 0 2966.0 2664.0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0 0 0 0 0 0
MA0081.2_shift2 (SPIB)				; oligos_7nt_mkv5_m37 versus MA0081.2 (SPIB); m=6/14; ncol2=16; w=12; offset=0; strand=D; shift=2; score=0.559676; --tytCACTTCCTCttty-- ; cor=; Ncor= a 0 0 5347.0 4682.0 2179.0 379.0 24319.0 239.0 450.0 190.0 206.0 275.0 865.0 1020.0 4963.0 2838.0 4159.0 4026.0 0 0 c 0 0 5797.0 8293.0 6429.0 23971.0 619.0 22730.0 236.0 200.0 26145.0 25492.0 4517.0 20113.0 3922.0 5425.0 6029.0 8589.0 0 0 g 0 0 4026.0 4544.0 3193.0 1721.0 669.0 2516.0 157.0 243.0 153.0 129.0 1829.0 2316.0 781.0 2087.0 2409.0 4165.0 0 0 t 0 0 11760.0 9411.0 15129.0 859.0 1323.0 1445.0 26087.0 26297.0 426.0 1034.0 19719.0 3481.0 17264.0 16580.0 14333.0 10150.0 0 0
MA0765.2_shift4 (ETV5)				; oligos_7nt_mkv5_m37 versus MA0765.2 (ETV5); m=7/14; ncol2=11; w=10; offset=2; strand=D; shift=4; score=0.546349; ----bcACTTCCGsy----- ; cor=; Ncor= a 0 0 0 0 4531.0 4782.0 19410.0 312.0 1043.0 222.0 243.0 367.0 1295.0 3017.0 4679.0 0 0 0 0 0 c 0 0 0 0 8003.0 10307.0 2443.0 24041.0 1145.0 956.0 25484.0 25061.0 1743.0 6921.0 8378.0 0 0 0 0 0 g 0 0 0 0 7117.0 6129.0 3017.0 994.0 408.0 816.0 336.0 498.0 18757.0 11944.0 6039.0 0 0 0 0 0 t 0 0 0 0 6667.0 5100.0 1448.0 971.0 23722.0 24324.0 255.0 392.0 4523.0 4436.0 7222.0 0 0 0 0 0
MA0645.1_rc_shift5 (ETV6_rc)				; oligos_7nt_mkv5_m37 versus MA0645.1_rc (ETV6_rc); m=8/14; ncol2=10; w=9; offset=3; strand=R; shift=5; score=0.522999; -----yACTTCCGsk----- ; cor=; Ncor= a 0 0 0 0 0 1091.0 6687.0 0.0 41.0 0.0 22.0 13.0 308.0 441.0 2002.0 0 0 0 0 0 c 0 0 0 0 0 3205.0 233.0 6687.0 32.0 7.0 6687.0 6687.0 397.0 4292.0 4684.0 0 0 0 0 0 g 0 0 0 0 0 342.0 834.0 52.0 13.0 0.0 0.0 0.0 6379.0 2394.0 6562.0 0 0 0 0 0 t 0 0 0 0 0 2049.0 184.0 768.0 6687.0 6687.0 21.0 7.0 1476.0 342.0 9414.0 0 0 0 0 0
MA0763.1_rc_shift5 (ETV3_rc)				; oligos_7nt_mkv5_m37 versus MA0763.1_rc (ETV3_rc); m=9/14; ncol2=10; w=9; offset=3; strand=R; shift=5; score=0.497786; -----cACTTCCGGT----- ; cor=; Ncor= a 0 0 0 0 0 25.0 215.0 0.0 71.0 4.0 16.0 14.0 13.0 31.0 24.0 0 0 0 0 0 c 0 0 0 0 0 98.0 7.0 215.0 0.0 0.0 215.0 215.0 0.0 14.0 38.0 0 0 0 0 0 g 0 0 0 0 0 41.0 32.0 14.0 0.0 8.0 0.0 0.0 215.0 215.0 27.0 0 0 0 0 0 t 0 0 0 0 0 52.0 0.0 58.0 215.0 215.0 0.0 0.0 9.0 18.0 215.0 0 0 0 0 0
MA0760.1_rc_shift5 (ERF_rc)				; oligos_7nt_mkv5_m37 versus MA0760.1_rc (ERF_rc); m=10/14; ncol2=10; w=9; offset=3; strand=R; shift=5; score=0.485222; -----yAyTTCCGGT----- ; cor=; Ncor= a 0 0 0 0 0 22.0 205.0 0.0 30.0 2.0 0.0 0.0 0.0 34.0 3.0 0 0 0 0 0 c 0 0 0 0 0 92.0 11.0 205.0 0.0 3.0 205.0 205.0 6.0 8.0 33.0 0 0 0 0 0 g 0 0 0 0 0 28.0 41.0 17.0 0.0 3.0 3.0 0.0 205.0 205.0 4.0 0 0 0 0 0 t 0 0 0 0 0 62.0 0.0 82.0 205.0 205.0 0.0 0.0 25.0 7.0 205.0 0 0 0 0 0
MA0807.1_rc_shift2 (TBX5_rc)				; oligos_7nt_mkv5_m37 versus MA0807.1_rc (TBX5_rc); m=11/14; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.482951; --TmACACCT---------- ; cor=; Ncor= a 0 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 0 0 0 0 0 c 0 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 0 0 0 0 0 g 0 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 0 0 0 0 0 t 0 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0 0 0 0 0 0
MA0806.1_rc_shift2 (TBX4_rc)				; oligos_7nt_mkv5_m37 versus MA0806.1_rc (TBX4_rc); m=12/14; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.47316; --TcACACCT---------- ; cor=; Ncor= a 0 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 0 0 0 0 0 0 0 0 c 0 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 0 0 0 0 0 0 0 0 g 0 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 0 0 0 0 0 0 0 0 t 0 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0 0 0 0 0 0 0 0 0
MA0080.5_rc_shift0 (SPI1_rc)				; oligos_7nt_mkv5_m37 versus MA0080.5_rc (SPI1_rc); m=13/14; ncol2=20; w=12; offset=-2; strand=R; shift=0; score=0.434573; wyttTCACTTCCTCTttyyy ; cor=; Ncor= a 37146.0 32717.0 27628.0 21682.0 10315.0 5993.0 108324.0 2191.0 3215.0 1280.0 1287.0 1702.0 4147.0 6119.0 17071.0 13450.0 17055.0 21525.0 29424.0 30010.0 c 28335.0 34829.0 29188.0 30577.0 20647.0 103485.0 7231.0 109802.0 1308.0 1407.0 127639.0 125703.0 12544.0 100825.0 13479.0 25580.0 25893.0 37341.0 34277.0 38405.0 g 24884.0 26246.0 16927.0 20113.0 11316.0 12697.0 3717.0 9931.0 792.0 1339.0 954.0 568.0 3425.0 10958.0 2914.0 12269.0 11424.0 20183.0 21262.0 22587.0 t 42838.0 39411.0 59460.0 60831.0 90925.0 11028.0 13931.0 11279.0 127888.0 129177.0 3323.0 5230.0 113087.0 15301.0 99739.0 81904.0 78831.0 54154.0 48240.0 42201.0
MA0641.1_rc_shift5 (ELF4_rc)				; oligos_7nt_mkv5_m37 versus MA0641.1_rc (ELF4_rc); m=14/14; ncol2=12; w=9; offset=3; strand=R; shift=5; score=0.428069; -----yACTTCCGGGTt--- ; cor=; Ncor= a 0 0 0 0 0 113.0 979.0 6.0 4.0 2.0 2.0 0.0 0.0 1.0 106.0 149.0 192.0 0 0 0 c 0 0 0 0 0 463.0 28.0 1207.0 2.0 2.0 1226.0 1226.0 6.0 105.0 75.0 15.0 160.0 0 0 0 g 0 0 0 0 0 83.0 56.0 18.0 5.0 0.0 0.0 0.0 997.0 990.0 930.0 73.0 109.0 0 0 0 t 0 0 0 0 0 403.0 4.0 43.0 737.0 739.0 0.0 1.0 54.0 17.0 198.0 705.0 598.0 0 0 0