One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m39/peak-motifs_oligos_7nt_mkv5_m39.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m39/peak-motifs_oligos_7nt_mkv5_m39_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m39_shift0 ; 16 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m39_shift0 (oligos_7nt_mkv5_m39oligos_7nt_mkv5_m39)
; oligos_7nt_mkv5_m39 (oligos_7nt_mkv5_m39oligos_7nt_mkv5_m39); m=0 (reference); ncol1=11; shift=0; ncol=17; ssCGCCRCGss------ ; Alignment reference a 257 300 0 0 45 14 1405 0 0 165 220 0 0 0 0 0 0 c 949 604 2014 0 1839 1549 57 2015 4 942 723 0 0 0 0 0 0 g 579 882 1 2015 21 382 536 0 2011 547 833 0 0 0 0 0 0 t 230 229 0 0 110 70 17 0 0 361 239 0 0 0 0 0 0

MA0608.1_shift3 (Creb3l2)
; oligos_7nt_mkv5_m39 versus MA0608.1 (Creb3l2); m=1/15; ncol2=9; w=8; offset=3; strand=D; shift=3; score=0.534573; ---KmCACGTGd----- ; cor=; Ncor= a 0 0 0 2.0 250.0 1.0 996.0 1.0 1.0 1.0 1.0 250.0 0 0 0 0 0 c 0 0 0 2.0 623.0 872.0 1.0 996.0 1.0 1.0 143.0 2.0 0 0 0 0 0 g 0 0 0 745.0 1.0 126.0 1.0 1.0 996.0 1.0 854.0 250.0 0 0 0 0 0 t 0 0 0 250.0 126.0 1.0 1.0 1.0 1.0 996.0 1.0 498.0 0 0 0 0 0

MA1099.2_rc_shift3 (HES1_rc)
; oligos_7nt_mkv5_m39 versus MA1099.2_rc (HES1_rc); m=2/15; ncol2=10; w=8; offset=3; strand=R; shift=3; score=0.483621; ---gvCACGyGcc---- ; cor=; Ncor= a 0 0 0 3216.0 4837.0 53.0 18526.0 0.0 791.0 232.0 18.0 8007.0 4239.0 0 0 0 0 c 0 0 0 6013.0 6360.0 18526.0 0.0 18526.0 0.0 9081.0 0.0 18526.0 18526.0 0 0 0 0 g 0 0 0 12513.0 6203.0 0.0 4057.0 0.0 18526.0 0.0 18526.0 2072.0 3492.0 0 0 0 0 t 0 0 0 2742.0 1126.0 1.0 253.0 21.0 0.0 9446.0 464.0 5858.0 3321.0 0 0 0 0

MA1474.1_shift2 (CREB3L4)
; oligos_7nt_mkv5_m39 versus MA1474.1 (CREB3L4); m=3/15; ncol2=12; w=9; offset=2; strand=D; shift=2; score=0.482077; --ygCCACGTCAyc--- ; cor=; Ncor= a 0 0 876.0 828.0 1118.0 260.0 3891.0 13.0 306.0 53.0 500.0 3891.0 284.0 664.0 0 0 0 c 0 0 1802.0 247.0 3891.0 3891.0 50.0 3891.0 65.0 301.0 3891.0 515.0 2584.0 1740.0 0 0 0 g 0 0 959.0 3891.0 165.0 112.0 208.0 20.0 3891.0 63.0 690.0 769.0 729.0 788.0 0 0 0 t 0 0 2090.0 1403.0 246.0 221.0 8.0 130.0 0.0 3891.0 279.0 275.0 1308.0 698.0 0 0 0

MA0006.1_rc_shift5 (Ahr::Arnt_rc)
; oligos_7nt_mkv5_m39 versus MA0006.1_rc (Ahr::Arnt_rc); m=4/15; ncol2=6; w=6; offset=5; strand=R; shift=5; score=0.481857; -----CACGCr------ ; cor=; Ncor= a 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 11.0 0 0 0 0 0 0 c 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 2.0 0 0 0 0 0 0 g 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 8.0 0 0 0 0 0 0 t 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 0 0

MA0839.1_shift1 (CREB3L1)
; oligos_7nt_mkv5_m39 versus MA0839.1 (CREB3L1); m=5/15; ncol2=14; w=10; offset=1; strand=D; shift=1; score=0.480958; -rTGCCACGTCAyCa-- ; cor=; Ncor= a 0 247.0 38.0 20.0 61.0 3.0 671.0 0.0 21.0 7.0 121.0 671.0 60.0 76.0 671.0 0 0 c 0 143.0 159.0 3.0 671.0 671.0 0.0 671.0 3.0 0.0 671.0 33.0 186.0 671.0 65.0 0 0 g 0 181.0 29.0 671.0 0.0 0.0 3.0 3.0 671.0 3.0 40.0 72.0 125.0 64.0 167.0 0 0 t 0 100.0 671.0 18.0 2.0 5.0 0.0 0.0 0.0 671.0 10.0 39.0 300.0 79.0 127.0 0 0

MA1466.1_rc_shift1 (ATF6_rc)
; oligos_7nt_mkv5_m39 versus MA1466.1_rc (ATF6_rc); m=6/15; ncol2=14; w=10; offset=1; strand=R; shift=1; score=0.473395; -sTGCCACGTCAyca-- ; cor=; Ncor= a 0 271.0 57.0 12.0 196.0 15.0 1158.0 0.0 1.0 2.0 4.0 1158.0 4.0 277.0 723.0 0 0 c 0 346.0 274.0 0.0 1158.0 1158.0 0.0 1158.0 0.0 11.0 1158.0 0.0 415.0 1158.0 114.0 0 0 g 0 301.0 56.0 1158.0 1.0 0.0 3.0 0.0 1158.0 1.0 3.0 2.0 192.0 234.0 234.0 0 0 t 0 240.0 1158.0 30.0 7.0 25.0 0.0 2.0 0.0 1158.0 3.0 0.0 743.0 148.0 87.0 0 0

MA0746.2_shift2 (SP3)
; oligos_7nt_mkv5_m39 versus MA0746.2 (SP3); m=7/15; ncol2=13; w=9; offset=2; strand=D; shift=2; score=0.455141; --srCCACGCCCmCy-- ; cor=; Ncor= a 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0 0 0 c 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0 0 0 g 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0 0 0 t 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0 0 0

MA0649.1_shift3 (HEY2)
; oligos_7nt_mkv5_m39 versus MA0649.1 (HEY2); m=8/15; ncol2=10; w=8; offset=3; strand=D; shift=3; score=0.450047; ---GrCACGTGyc---- ; cor=; Ncor= a 0 0 0 107.0 651.0 84.0 1800.0 7.0 27.0 36.0 0.0 50.0 285.0 0 0 0 0 c 0 0 0 99.0 305.0 1800.0 0.0 1800.0 72.0 120.0 34.0 1047.0 869.0 0 0 0 0 g 0 0 0 1800.0 620.0 83.0 128.0 0.0 1800.0 0.0 1800.0 128.0 382.0 0 0 0 0 t 0 0 0 101.0 224.0 58.0 0.0 0.0 0.0 1800.0 30.0 753.0 264.0 0 0 0 0

MA0259.1_rc_shift4 (ARNT::HIF1A_rc)
; oligos_7nt_mkv5_m39 versus MA0259.1_rc (ARNT::HIF1A_rc); m=9/15; ncol2=8; w=7; offset=4; strand=R; shift=4; score=0.443761; ----gCACGTvb----- ; cor=; Ncor= a 0 0 0 0 15.0 0.0 104.0 0.0 1.0 1.0 31.0 0.0 0 0 0 0 0 c 0 0 0 0 20.0 104.0 0.0 104.0 0.0 23.0 34.0 49.0 0 0 0 0 0 g 0 0 0 0 51.0 0.0 0.0 0.0 103.0 2.0 29.0 28.0 0 0 0 0 0 t 0 0 0 0 18.0 0.0 0.0 0.0 0.0 78.0 10.0 27.0 0 0 0 0 0

MA0004.1_rc_shift5 (Arnt_rc)
; oligos_7nt_mkv5_m39 versus MA0004.1_rc (Arnt_rc); m=10/15; ncol2=6; w=6; offset=5; strand=R; shift=5; score=0.443305; -----CACGTG------ ; cor=; Ncor= a 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 0 0 0 0 0 0 c 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 0 0 0 0 0 0 g 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 0 0 0 0 0 0 t 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0 0 0 0 0 0 0

MA1512.1_shift3 (KLF11)
; oligos_7nt_mkv5_m39 versus MA1512.1 (KLF11); m=11/15; ncol2=11; w=8; offset=3; strand=D; shift=3; score=0.432369; ---gcCACGCCCmC--- ; cor=; Ncor= a 0 0 0 1882.0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 0 0 0 c 0 0 0 2054.0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 0 0 0 g 0 0 0 3930.0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 0 0 0 t 0 0 0 1299.0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0 0 0 0

MA0616.2_rc_shift3 (HES2_rc)
; oligos_7nt_mkv5_m39 versus MA0616.2_rc (HES2_rc); m=12/15; ncol2=10; w=8; offset=3; strand=R; shift=3; score=0.431797; ---grCACGTGcC---- ; cor=; Ncor= a 0 0 0 1319.0 3849.0 0.0 8483.0 0.0 129.0 0.0 73.0 1581.0 798.0 0 0 0 0 c 0 0 0 1735.0 1289.0 8483.0 0.0 8483.0 0.0 2028.0 85.0 8483.0 8483.0 0 0 0 0 g 0 0 0 4464.0 4634.0 15.0 1098.0 0.0 8483.0 0.0 8483.0 1107.0 1193.0 0 0 0 0 t 0 0 0 966.0 512.0 53.0 0.0 0.0 0.0 6455.0 118.0 1501.0 775.0 0 0 0 0

MA1546.1_shift1 (PAX3(var.2))
; oligos_7nt_mkv5_m39 versus MA1546.1 (PAX3(var.2)); m=13/15; ncol2=16; w=10; offset=1; strand=D; shift=1; score=0.42361; -ysGTCACGsywATTAr ; cor=; Ncor= a 0 203.0 112.0 1.0 181.0 9.0 1344.0 13.0 161.0 3.0 197.0 512.0 1344.0 50.0 83.0 1344.0 390.0 c 0 515.0 880.0 2.0 79.0 1344.0 2.0 1344.0 1.0 836.0 414.0 228.0 152.0 43.0 138.0 66.0 326.0 g 0 216.0 464.0 1344.0 6.0 23.0 19.0 2.0 1344.0 508.0 127.0 138.0 353.0 24.0 52.0 108.0 363.0 t 0 411.0 167.0 126.0 1344.0 263.0 2.0 201.0 0.0 6.0 606.0 467.0 86.0 1344.0 1344.0 215.0 266.0

MA0741.1_shift3 (KLF16)
; oligos_7nt_mkv5_m39 versus MA0741.1 (KLF16); m=14/15; ncol2=11; w=8; offset=3; strand=D; shift=3; score=0.421284; ---gmCMCgCCCMC--- ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0 0

MA0622.1_shift4 (Mlxip)
; oligos_7nt_mkv5_m39 versus MA0622.1 (Mlxip); m=15/15; ncol2=8; w=7; offset=4; strand=D; shift=4; score=0.409547; ----bCACGTGk----- ; cor=; Ncor= a 0 0 0 0 53.0 0.0 999.0 0.0 0.0 0.0 0.0 188.0 0 0 0 0 0 c 0 0 0 0 263.0 999.0 0.0 999.0 0.0 0.0 0.0 63.0 0 0 0 0 0 g 0 0 0 0 421.0 0.0 0.0 0.0 999.0 0.0 999.0 250.0 0 0 0 0 0 t 0 0 0 0 263.0 0.0 0.0 0.0 0.0 999.0 0.0 499.0 0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m39_shift0 (oligos_7nt_mkv5_m39oligos_7nt_mkv5_m39)				; oligos_7nt_mkv5_m39 (oligos_7nt_mkv5_m39oligos_7nt_mkv5_m39); m=0 (reference); ncol1=11; shift=0; ncol=17; ssCGCCRCGss------ ; Alignment reference a 257 300 0 0 45 14 1405 0 0 165 220 0 0 0 0 0 0 c 949 604 2014 0 1839 1549 57 2015 4 942 723 0 0 0 0 0 0 g 579 882 1 2015 21 382 536 0 2011 547 833 0 0 0 0 0 0 t 230 229 0 0 110 70 17 0 0 361 239 0 0 0 0 0 0
MA0608.1_shift3 (Creb3l2)				; oligos_7nt_mkv5_m39 versus MA0608.1 (Creb3l2); m=1/15; ncol2=9; w=8; offset=3; strand=D; shift=3; score=0.534573; ---KmCACGTGd----- ; cor=; Ncor= a 0 0 0 2.0 250.0 1.0 996.0 1.0 1.0 1.0 1.0 250.0 0 0 0 0 0 c 0 0 0 2.0 623.0 872.0 1.0 996.0 1.0 1.0 143.0 2.0 0 0 0 0 0 g 0 0 0 745.0 1.0 126.0 1.0 1.0 996.0 1.0 854.0 250.0 0 0 0 0 0 t 0 0 0 250.0 126.0 1.0 1.0 1.0 1.0 996.0 1.0 498.0 0 0 0 0 0
MA1099.2_rc_shift3 (HES1_rc)				; oligos_7nt_mkv5_m39 versus MA1099.2_rc (HES1_rc); m=2/15; ncol2=10; w=8; offset=3; strand=R; shift=3; score=0.483621; ---gvCACGyGcc---- ; cor=; Ncor= a 0 0 0 3216.0 4837.0 53.0 18526.0 0.0 791.0 232.0 18.0 8007.0 4239.0 0 0 0 0 c 0 0 0 6013.0 6360.0 18526.0 0.0 18526.0 0.0 9081.0 0.0 18526.0 18526.0 0 0 0 0 g 0 0 0 12513.0 6203.0 0.0 4057.0 0.0 18526.0 0.0 18526.0 2072.0 3492.0 0 0 0 0 t 0 0 0 2742.0 1126.0 1.0 253.0 21.0 0.0 9446.0 464.0 5858.0 3321.0 0 0 0 0
MA1474.1_shift2 (CREB3L4)				; oligos_7nt_mkv5_m39 versus MA1474.1 (CREB3L4); m=3/15; ncol2=12; w=9; offset=2; strand=D; shift=2; score=0.482077; --ygCCACGTCAyc--- ; cor=; Ncor= a 0 0 876.0 828.0 1118.0 260.0 3891.0 13.0 306.0 53.0 500.0 3891.0 284.0 664.0 0 0 0 c 0 0 1802.0 247.0 3891.0 3891.0 50.0 3891.0 65.0 301.0 3891.0 515.0 2584.0 1740.0 0 0 0 g 0 0 959.0 3891.0 165.0 112.0 208.0 20.0 3891.0 63.0 690.0 769.0 729.0 788.0 0 0 0 t 0 0 2090.0 1403.0 246.0 221.0 8.0 130.0 0.0 3891.0 279.0 275.0 1308.0 698.0 0 0 0
MA0006.1_rc_shift5 (Ahr::Arnt_rc)				; oligos_7nt_mkv5_m39 versus MA0006.1_rc (Ahr::Arnt_rc); m=4/15; ncol2=6; w=6; offset=5; strand=R; shift=5; score=0.481857; -----CACGCr------ ; cor=; Ncor= a 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 11.0 0 0 0 0 0 0 c 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 2.0 0 0 0 0 0 0 g 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 8.0 0 0 0 0 0 0 t 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 0 0
MA0839.1_shift1 (CREB3L1)				; oligos_7nt_mkv5_m39 versus MA0839.1 (CREB3L1); m=5/15; ncol2=14; w=10; offset=1; strand=D; shift=1; score=0.480958; -rTGCCACGTCAyCa-- ; cor=; Ncor= a 0 247.0 38.0 20.0 61.0 3.0 671.0 0.0 21.0 7.0 121.0 671.0 60.0 76.0 671.0 0 0 c 0 143.0 159.0 3.0 671.0 671.0 0.0 671.0 3.0 0.0 671.0 33.0 186.0 671.0 65.0 0 0 g 0 181.0 29.0 671.0 0.0 0.0 3.0 3.0 671.0 3.0 40.0 72.0 125.0 64.0 167.0 0 0 t 0 100.0 671.0 18.0 2.0 5.0 0.0 0.0 0.0 671.0 10.0 39.0 300.0 79.0 127.0 0 0
MA1466.1_rc_shift1 (ATF6_rc)				; oligos_7nt_mkv5_m39 versus MA1466.1_rc (ATF6_rc); m=6/15; ncol2=14; w=10; offset=1; strand=R; shift=1; score=0.473395; -sTGCCACGTCAyca-- ; cor=; Ncor= a 0 271.0 57.0 12.0 196.0 15.0 1158.0 0.0 1.0 2.0 4.0 1158.0 4.0 277.0 723.0 0 0 c 0 346.0 274.0 0.0 1158.0 1158.0 0.0 1158.0 0.0 11.0 1158.0 0.0 415.0 1158.0 114.0 0 0 g 0 301.0 56.0 1158.0 1.0 0.0 3.0 0.0 1158.0 1.0 3.0 2.0 192.0 234.0 234.0 0 0 t 0 240.0 1158.0 30.0 7.0 25.0 0.0 2.0 0.0 1158.0 3.0 0.0 743.0 148.0 87.0 0 0
MA0746.2_shift2 (SP3)				; oligos_7nt_mkv5_m39 versus MA0746.2 (SP3); m=7/15; ncol2=13; w=9; offset=2; strand=D; shift=2; score=0.455141; --srCCACGCCCmCy-- ; cor=; Ncor= a 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0 0 0 c 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0 0 0 g 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0 0 0 t 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0 0 0
MA0649.1_shift3 (HEY2)				; oligos_7nt_mkv5_m39 versus MA0649.1 (HEY2); m=8/15; ncol2=10; w=8; offset=3; strand=D; shift=3; score=0.450047; ---GrCACGTGyc---- ; cor=; Ncor= a 0 0 0 107.0 651.0 84.0 1800.0 7.0 27.0 36.0 0.0 50.0 285.0 0 0 0 0 c 0 0 0 99.0 305.0 1800.0 0.0 1800.0 72.0 120.0 34.0 1047.0 869.0 0 0 0 0 g 0 0 0 1800.0 620.0 83.0 128.0 0.0 1800.0 0.0 1800.0 128.0 382.0 0 0 0 0 t 0 0 0 101.0 224.0 58.0 0.0 0.0 0.0 1800.0 30.0 753.0 264.0 0 0 0 0
MA0259.1_rc_shift4 (ARNT::HIF1A_rc)				; oligos_7nt_mkv5_m39 versus MA0259.1_rc (ARNT::HIF1A_rc); m=9/15; ncol2=8; w=7; offset=4; strand=R; shift=4; score=0.443761; ----gCACGTvb----- ; cor=; Ncor= a 0 0 0 0 15.0 0.0 104.0 0.0 1.0 1.0 31.0 0.0 0 0 0 0 0 c 0 0 0 0 20.0 104.0 0.0 104.0 0.0 23.0 34.0 49.0 0 0 0 0 0 g 0 0 0 0 51.0 0.0 0.0 0.0 103.0 2.0 29.0 28.0 0 0 0 0 0 t 0 0 0 0 18.0 0.0 0.0 0.0 0.0 78.0 10.0 27.0 0 0 0 0 0
MA0004.1_rc_shift5 (Arnt_rc)				; oligos_7nt_mkv5_m39 versus MA0004.1_rc (Arnt_rc); m=10/15; ncol2=6; w=6; offset=5; strand=R; shift=5; score=0.443305; -----CACGTG------ ; cor=; Ncor= a 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 0 0 0 0 0 0 c 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 0 0 0 0 0 0 g 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 0 0 0 0 0 0 t 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0 0 0 0 0 0 0
MA1512.1_shift3 (KLF11)				; oligos_7nt_mkv5_m39 versus MA1512.1 (KLF11); m=11/15; ncol2=11; w=8; offset=3; strand=D; shift=3; score=0.432369; ---gcCACGCCCmC--- ; cor=; Ncor= a 0 0 0 1882.0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 0 0 0 c 0 0 0 2054.0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 0 0 0 g 0 0 0 3930.0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 0 0 0 t 0 0 0 1299.0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0 0 0 0
MA0616.2_rc_shift3 (HES2_rc)				; oligos_7nt_mkv5_m39 versus MA0616.2_rc (HES2_rc); m=12/15; ncol2=10; w=8; offset=3; strand=R; shift=3; score=0.431797; ---grCACGTGcC---- ; cor=; Ncor= a 0 0 0 1319.0 3849.0 0.0 8483.0 0.0 129.0 0.0 73.0 1581.0 798.0 0 0 0 0 c 0 0 0 1735.0 1289.0 8483.0 0.0 8483.0 0.0 2028.0 85.0 8483.0 8483.0 0 0 0 0 g 0 0 0 4464.0 4634.0 15.0 1098.0 0.0 8483.0 0.0 8483.0 1107.0 1193.0 0 0 0 0 t 0 0 0 966.0 512.0 53.0 0.0 0.0 0.0 6455.0 118.0 1501.0 775.0 0 0 0 0
MA1546.1_shift1 (PAX3(var.2))				; oligos_7nt_mkv5_m39 versus MA1546.1 (PAX3(var.2)); m=13/15; ncol2=16; w=10; offset=1; strand=D; shift=1; score=0.42361; -ysGTCACGsywATTAr ; cor=; Ncor= a 0 203.0 112.0 1.0 181.0 9.0 1344.0 13.0 161.0 3.0 197.0 512.0 1344.0 50.0 83.0 1344.0 390.0 c 0 515.0 880.0 2.0 79.0 1344.0 2.0 1344.0 1.0 836.0 414.0 228.0 152.0 43.0 138.0 66.0 326.0 g 0 216.0 464.0 1344.0 6.0 23.0 19.0 2.0 1344.0 508.0 127.0 138.0 353.0 24.0 52.0 108.0 363.0 t 0 411.0 167.0 126.0 1344.0 263.0 2.0 201.0 0.0 6.0 606.0 467.0 86.0 1344.0 1344.0 215.0 266.0
MA0741.1_shift3 (KLF16)				; oligos_7nt_mkv5_m39 versus MA0741.1 (KLF16); m=14/15; ncol2=11; w=8; offset=3; strand=D; shift=3; score=0.421284; ---gmCMCgCCCMC--- ; cor=; Ncor= a 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 0 c 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 0 g 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 0 t 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0 0
MA0622.1_shift4 (Mlxip)				; oligos_7nt_mkv5_m39 versus MA0622.1 (Mlxip); m=15/15; ncol2=8; w=7; offset=4; strand=D; shift=4; score=0.409547; ----bCACGTGk----- ; cor=; Ncor= a 0 0 0 0 53.0 0.0 999.0 0.0 0.0 0.0 0.0 188.0 0 0 0 0 0 c 0 0 0 0 263.0 999.0 0.0 999.0 0.0 0.0 0.0 63.0 0 0 0 0 0 g 0 0 0 0 421.0 0.0 0.0 0.0 999.0 0.0 999.0 250.0 0 0 0 0 0 t 0 0 0 0 263.0 0.0 0.0 0.0 0.0 999.0 0.0 499.0 0 0 0 0 0