One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m44/peak-motifs_oligos_7nt_mkv5_m44.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_7nt_mkv5_m44/peak-motifs_oligos_7nt_mkv5_m44_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m44_shift7 ; 31 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv5_m44_shift7 (oligos_7nt_mkv5_m44oligos_7nt_mkv5_m44)
; oligos_7nt_mkv5_m44 (oligos_7nt_mkv5_m44oligos_7nt_mkv5_m44); m=0 (reference); ncol1=11; shift=7; ncol=20; -------ccACCCCCAsc-- ; Alignment reference a 0 0 0 0 0 0 0 255 255 1588 2 0 0 0 1 1582 243 280 0 0 c 0 0 0 0 0 0 0 865 980 0 1586 1579 1583 1584 1549 0 699 753 0 0 g 0 0 0 0 0 0 0 219 201 0 0 9 5 4 34 6 423 329 0 0 t 0 0 0 0 0 0 0 249 152 0 0 0 0 0 4 0 223 226 0 0

MA1630.1_rc_shift7 (Znf281_rc)
; oligos_7nt_mkv5_m44 versus MA1630.1_rc (Znf281_rc); m=1/30; ncol2=11; w=11; offset=0; strand=R; shift=7; score=0.812632; -------CcTCCCCCAcc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 315.0 1103.0 11.0 52.0 29.0 23.0 24.0 12.0 6298.0 745.0 954.0 0 0 c 0 0 0 0 0 0 0 5523.0 4312.0 8.0 6457.0 6402.0 6378.0 6356.0 6449.0 29.0 3751.0 3539.0 0 0 g 0 0 0 0 0 0 0 356.0 418.0 45.0 41.0 115.0 131.0 163.0 88.0 233.0 1076.0 878.0 0 0 t 0 0 0 0 0 0 0 374.0 735.0 6504.0 18.0 22.0 36.0 25.0 19.0 8.0 996.0 1197.0 0 0

MA0747.1_shift6 (SP8)
; oligos_7nt_mkv5_m44 versus MA0747.1 (SP8); m=2/30; ncol2=12; w=11; offset=-1; strand=D; shift=6; score=0.728121; ------rmCACgCCCmCy-- ; cor=; Ncor= a 0 0 0 0 0 0 52.0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 31.0 0 0 c 0 0 0 0 0 0 27.0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 52.0 0 0 g 0 0 0 0 0 0 78.0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 1.0 0 0 t 0 0 0 0 0 0 10.0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0 82.0 0 0

MA1564.1_shift6 (SP9)
; oligos_7nt_mkv5_m44 versus MA1564.1 (SP9); m=3/30; ncol2=12; w=11; offset=-1; strand=D; shift=6; score=0.693149; ------rcCmCGCCCmcy-- ; cor=; Ncor= a 0 0 0 0 0 0 834.0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 420.0 0 0 c 0 0 0 0 0 0 440.0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 1167.0 0 0 g 0 0 0 0 0 0 952.0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 204.0 0 0 t 0 0 0 0 0 0 226.0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0 660.0 0 0

MA0767.1_rc_shift8 (GCM2_rc)
; oligos_7nt_mkv5_m44 versus MA0767.1_rc (GCM2_rc); m=4/30; ncol2=10; w=10; offset=1; strand=R; shift=8; score=0.674419; --------yrCCCGCATv-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 240.0 1320.0 0.0 13.0 66.0 127.0 0.0 1320.0 45.0 427.0 0 0 c 0 0 0 0 0 0 0 0 341.0 91.0 1320.0 1320.0 1320.0 138.0 1320.0 24.0 299.0 375.0 0 0 g 0 0 0 0 0 0 0 0 140.0 533.0 0.0 0.0 1.0 1320.0 32.0 41.0 77.0 340.0 0 0 t 0 0 0 0 0 0 0 0 599.0 92.0 1.0 0.0 51.0 84.0 263.0 23.0 1320.0 179.0 0 0

MA1512.1_shift6 (KLF11)
; oligos_7nt_mkv5_m44 versus MA1512.1 (KLF11); m=5/30; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.64512; ------gcCACGCCCmC--- ; cor=; Ncor= a 0 0 0 0 0 0 1882.0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 0 0 0 c 0 0 0 0 0 0 2054.0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 0 0 0 g 0 0 0 0 0 0 3930.0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 0 0 0 t 0 0 0 0 0 0 1299.0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0 0 0 0

MA0746.2_shift5 (SP3)
; oligos_7nt_mkv5_m44 versus MA0746.2 (SP3); m=6/30; ncol2=13; w=11; offset=-2; strand=D; shift=5; score=0.634262; -----srCCACGCCCmCy-- ; cor=; Ncor= a 0 0 0 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0 0 0 c 0 0 0 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0 0 0 g 0 0 0 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0 0 0 t 0 0 0 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0 0 0

MA1511.1_shift6 (KLF10)
; oligos_7nt_mkv5_m44 versus MA1511.1 (KLF10); m=7/30; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.625248; ------gmCACrCCCmy--- ; cor=; Ncor= a 0 0 0 0 0 0 4746.0 6633.0 633.0 18751.0 238.0 13506.0 1.0 0.0 0.0 7545.0 934.0 0 0 0 c 0 0 0 0 0 0 2435.0 12654.0 19619.0 1663.0 19907.0 11.0 19995.0 19994.0 19244.0 11403.0 13118.0 0 0 0 g 0 0 0 0 0 0 14086.0 1299.0 98.0 1723.0 3.0 6234.0 2.0 0.0 0.0 587.0 770.0 0 0 0 t 0 0 0 0 0 0 1251.0 1373.0 485.0 6.0 157.0 543.0 0.0 0.0 2198.0 2686.0 6274.0 0 0 0

MA0056.2_shift6 (MZF1)
; oligos_7nt_mkv5_m44 versus MA0056.2 (MZF1); m=8/30; ncol2=13; w=11; offset=-1; strand=D; shift=6; score=0.611194; ------mwAATCCCCAchy- ; cor=; Ncor= a 0 0 0 0 0 0 2141.0 2477.0 5855.0 7149.0 106.0 100.0 135.0 111.0 117.0 6036.0 1693.0 2096.0 1762.0 0 c 0 0 0 0 0 0 2260.0 1944.0 1016.0 426.0 56.0 7949.0 7939.0 7919.0 7673.0 611.0 3007.0 2078.0 2206.0 0 g 0 0 0 0 0 0 1808.0 1543.0 999.0 385.0 98.0 100.0 54.0 58.0 83.0 484.0 1523.0 1482.0 1773.0 0 t 0 0 0 0 0 0 2033.0 2278.0 372.0 282.0 7982.0 93.0 114.0 154.0 369.0 1111.0 2019.0 2586.0 2501.0 0

MA1627.1_shift5 (Wt1)
; oligos_7nt_mkv5_m44 versus MA1627.1 (Wt1); m=9/30; ncol2=14; w=11; offset=-2; strand=D; shift=5; score=0.609737; -----cycCTCCCCCACmc- ; cor=; Ncor= a 0 0 0 0 0 876.0 667.0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 1675.0 520.0 0 c 0 0 0 0 0 1881.0 1630.0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 1350.0 2023.0 0 g 0 0 0 0 0 794.0 1161.0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 928.0 1038.0 0 t 0 0 0 0 0 1140.0 1233.0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0 738.0 1110.0 0

MA0741.1_shift6 (KLF16)
; oligos_7nt_mkv5_m44 versus MA0741.1 (KLF16); m=10/30; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.601322; ------gmCMCgCCCMC--- ; cor=; Ncor= a 0 0 0 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 0 c 0 0 0 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 0 g 0 0 0 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 0 t 0 0 0 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0 0

MA1578.1_shift9 (VEZF1)
; oligos_7nt_mkv5_m44 versus MA1578.1 (VEZF1); m=11/30; ncol2=10; w=9; offset=2; strand=D; shift=9; score=0.576766; ---------CCCCCCmytw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 406.0 44.0 240.0 333.0 0 c 0 0 0 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 357.0 550.0 171.0 173.0 0 g 0 0 0 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 110.0 70.0 211.0 152.0 0 t 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 125.0 334.0 377.0 339.0 0

MA0740.1_shift5 (KLF14)
; oligos_7nt_mkv5_m44 versus MA0740.1 (KLF14); m=12/30; ncol2=14; w=11; offset=-2; strand=D; shift=5; score=0.570883; -----krcCACGCCCmYyt- ; cor=; Ncor= a 0 0 0 0 0 430.0 1205.0 526.0 0.0 1708.0 2.0 69.0 0.0 0.0 0.0 716.0 32.0 280.0 649.0 0 c 0 0 0 0 0 215.0 73.0 1360.0 1599.0 136.0 1596.0 36.0 1602.0 1604.0 1609.0 961.0 1463.0 594.0 741.0 0 g 0 0 0 0 0 966.0 2280.0 96.0 10.0 58.0 0.0 2939.0 3.0 3.0 4.0 1.0 15.0 89.0 314.0 0 t 0 0 0 0 0 693.0 71.0 404.0 248.0 5.0 2.0 31.0 0.0 6.0 65.0 31.0 559.0 1041.0 1670.0 0

MA0162.4_shift7 (EGR1)
; oligos_7nt_mkv5_m44 versus MA0162.4 (EGR1); m=13/30; ncol2=14; w=11; offset=0; strand=D; shift=7; score=0.565483; -------ccmCGCCCACgCm ; cor=; Ncor= a 0 0 0 0 0 0 0 7087.0 3997.0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 8903.0 c 0 0 0 0 0 0 0 11610.0 14749.0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 10441.0 g 0 0 0 0 0 0 0 6621.0 7211.0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 6345.0 t 0 0 0 0 0 0 0 5280.0 4641.0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 4909.0

MA0753.2_shift4 (ZNF740)
; oligos_7nt_mkv5_m44 versus MA0753.2 (ZNF740); m=14/30; ncol2=13; w=10; offset=-3; strand=D; shift=4; score=0.560959; ----cyrCCCCCCCCAc--- ; cor=; Ncor= a 0 0 0 0 186.0 162.0 727.0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0 0 0 0 c 0 0 0 0 502.0 677.0 343.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0 0 0 0 g 0 0 0 0 182.0 72.0 1055.0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0 0 0 0 t 0 0 0 0 185.0 378.0 312.0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0 0 0 0

MA1107.2_shift4 (KLF9)
; oligos_7nt_mkv5_m44 versus MA1107.2 (KLF9); m=15/30; ncol2=16; w=11; offset=-3; strand=D; shift=4; score=0.553022; ----crgCCACACCCAChyc ; cor=; Ncor= a 0 0 0 0 5359.0 8015.0 2862.0 4664.0 287.0 21899.0 221.0 19187.0 224.0 2428.0 146.0 18837.0 792.0 6948.0 4110.0 5875.0 c 0 0 0 0 10412.0 5108.0 4342.0 17839.0 24709.0 2559.0 24863.0 1070.0 24365.0 22117.0 24682.0 4339.0 20644.0 8797.0 10520.0 9519.0 g 0 0 0 0 5200.0 7779.0 16852.0 1660.0 291.0 708.0 353.0 4340.0 735.0 605.0 205.0 852.0 1778.0 3289.0 4423.0 5681.0 t 0 0 0 0 4608.0 4677.0 1523.0 1416.0 292.0 413.0 142.0 982.0 255.0 429.0 546.0 1551.0 2365.0 6545.0 6526.0 4504.0

MA1517.1_shift5 (KLF6)
; oligos_7nt_mkv5_m44 versus MA1517.1 (KLF6); m=16/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.547345; -----srcCACRCCCm---- ; cor=; Ncor= a 0 0 0 0 0 443.0 1035.0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 0 0 0 c 0 0 0 0 0 624.0 490.0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 0 0 0 g 0 0 0 0 0 626.0 1157.0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 0 0 0 t 0 0 0 0 0 499.0 136.0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0 0 0 0

MA0155.1_rc_shift8 (INSM1_rc)
; oligos_7nt_mkv5_m44 versus MA0155.1_rc (INSM1_rc); m=17/30; ncol2=12; w=10; offset=1; strand=R; shift=8; score=0.543723; --------ygmCCCCwkrCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.0 5.0 6.0 0.0 0.0 0.0 0.0 8.0 3.0 13.0 4.0 19.0 c 0 0 0 0 0 0 0 0 12.0 0.0 16.0 24.0 24.0 23.0 24.0 0.0 0.0 3.0 20.0 4.0 g 0 0 0 0 0 0 0 0 0.0 16.0 2.0 0.0 0.0 1.0 0.0 0.0 15.0 8.0 0.0 0.0 t 0 0 0 0 0 0 0 0 10.0 3.0 0.0 0.0 0.0 0.0 0.0 16.0 6.0 0.0 0.0 1.0

MA0493.1_shift5 (Klf1)
; oligos_7nt_mkv5_m44 versus MA0493.1 (Klf1); m=18/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.541263; -----rrCCACACCCw---- ; cor=; Ncor= a 0 0 0 0 0 150.0 167.0 67.0 13.0 404.0 0.0 400.0 0.0 0.0 0.0 280.0 0 0 0 0 c 0 0 0 0 0 76.0 40.0 396.0 461.0 118.0 526.0 0.0 526.0 526.0 508.0 35.0 0 0 0 0 g 0 0 0 0 0 202.0 305.0 32.0 0.0 0.0 0.0 97.0 0.0 0.0 0.0 0.0 0 0 0 0 t 0 0 0 0 0 98.0 14.0 31.0 52.0 4.0 0.0 29.0 0.0 0.0 18.0 211.0 0 0 0 0

MA0742.1_shift5 (Klf12)
; oligos_7nt_mkv5_m44 versus MA0742.1 (Klf12); m=19/30; ncol2=15; w=11; offset=-2; strand=D; shift=5; score=0.538583; -----GrCCACGCCCwthtw ; cor=; Ncor= a 0 0 0 0 0 167.0 553.0 19.0 5.0 853.0 9.0 215.0 0.0 0.0 0.0 410.0 238.0 308.0 238.0 271.0 c 0 0 0 0 0 35.0 11.0 668.0 670.0 27.0 675.0 1.0 687.0 706.0 715.0 120.0 219.0 239.0 186.0 210.0 g 0 0 0 0 0 1158.0 531.0 8.0 12.0 2.0 0.0 1348.0 0.0 9.0 0.0 0.0 99.0 84.0 117.0 141.0 t 0 0 0 0 0 225.0 0.0 9.0 3.0 0.0 4.0 16.0 4.0 13.0 13.0 483.0 403.0 290.0 429.0 330.0

MA1515.1_shift5 (KLF2)
; oligos_7nt_mkv5_m44 versus MA1515.1 (KLF2); m=20/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.532903; -----srCCmCrCCCw---- ; cor=; Ncor= a 0 0 0 0 0 1054.0 2510.0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 1838.0 0 0 0 0 c 0 0 0 0 0 1376.0 1103.0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 1142.0 0 0 0 0 g 0 0 0 0 0 1320.0 2112.0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 389.0 0 0 0 0 t 0 0 0 0 0 872.0 433.0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 1253.0 0 0 0 0

MA0079.4_shift3 (SP1)
; oligos_7nt_mkv5_m44 versus MA0079.4 (SP1); m=21/30; ncol2=15; w=11; offset=-4; strand=D; shift=3; score=0.531806; ---ywrRCCACGCCCmCh-- ; cor=; Ncor= a 0 0 0 7866.0 28233.0 28895.0 14584.0 962.0 55.0 42154.0 0.0 959.0 0.0 8.0 0.0 24666.0 1195.0 12598.0 0 0 c 0 0 0 13273.0 1872.0 1530.0 0.0 48854.0 49649.0 12672.0 49660.0 0.0 49666.0 49662.0 48772.0 24196.0 37612.0 15606.0 0 0 g 0 0 0 9691.0 999.0 19477.0 37543.0 82.0 0.0 0.0 0.0 48957.0 0.0 0.0 0.0 15.0 919.0 3044.0 0 0 t 0 0 0 18833.0 19877.0 1184.0 153.0 124.0 1670.0 0.0 31.0 867.0 17.0 0.0 1440.0 1373.0 10717.0 18415.0 0 0

MA1516.1_shift5 (KLF3)
; oligos_7nt_mkv5_m44 versus MA1516.1 (KLF3); m=22/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.496645; -----grCCrCGCCCw---- ; cor=; Ncor= a 0 0 0 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 17029.0 0 0 0 0 c 0 0 0 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 10099.0 0 0 0 0 g 0 0 0 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 1514.0 0 0 0 0 t 0 0 0 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 14617.0 0 0 0 0

MA0736.1_shift8 (GLIS2)
; oligos_7nt_mkv5_m44 versus MA0736.1 (GLIS2); m=23/30; ncol2=14; w=10; offset=1; strand=D; shift=8; score=0.491355; --------kACCCCCCrCra ; cor=; Ncor= a 0 0 0 0 0 0 0 0 74.0 813.0 3.0 4.0 7.0 2.0 56.0 52.0 412.0 3.0 459.0 484.0 c 0 0 0 0 0 0 0 0 179.0 94.0 1072.0 1074.0 1074.0 1087.0 1061.0 1056.0 12.0 1080.0 36.0 16.0 g 0 0 0 0 0 0 0 0 929.0 130.0 3.0 0.0 0.0 0.0 0.0 1.0 915.0 28.0 909.0 234.0 t 0 0 0 0 0 0 0 0 439.0 1.0 5.0 1.0 14.0 0.0 4.0 99.0 50.0 69.0 64.0 228.0

MA1584.1_shift7 (ZIC5)
; oligos_7nt_mkv5_m44 versus MA1584.1 (ZIC5); m=24/30; ncol2=16; w=11; offset=0; strand=D; shift=7; score=0.491067; -------mgACCCCCCGCtG ; cor=; Ncor= a 0 0 0 0 0 0 0 6068.0 555.0 19266.0 250.0 147.0 1311.0 5.0 67.0 10.0 2110.0 2.0 2536.0 251.0 c 0 0 0 0 0 0 0 6877.0 3318.0 2320.0 21201.0 21163.0 20221.0 21263.0 21235.0 17685.0 21.0 19607.0 3844.0 8.0 g 0 0 0 0 0 0 0 5212.0 17329.0 2765.0 0.0 58.0 470.0 0.0 2.0 0.0 20412.0 235.0 3252.0 21153.0 t 0 0 0 0 0 0 0 3106.0 5687.0 0.0 17.0 57.0 328.0 1.0 2.0 3577.0 23.0 5843.0 18007.0 2.0

MA0039.4_shift9 (KLF4)
; oligos_7nt_mkv5_m44 versus MA0039.4 (KLF4); m=25/30; ncol2=12; w=9; offset=2; strand=D; shift=9; score=0.486165; ---------ssCCCCACCCh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 12570.0 11487.0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 16264.0 c 0 0 0 0 0 0 0 0 0 17520.0 14038.0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 18249.0 g 0 0 0 0 0 0 0 0 0 14243.0 18473.0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 6292.0 t 0 0 0 0 0 0 0 0 0 11484.0 11819.0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 15012.0

MA0733.1_shift7 (EGR4)
; oligos_7nt_mkv5_m44 versus MA0733.1 (EGR4); m=26/30; ncol2=16; w=11; offset=0; strand=D; shift=7; score=0.481422; -------yymCGCCCACGCA ; cor=; Ncor= a 0 0 0 0 0 0 0 1167.0 1143.0 2745.0 101.0 556.0 11.0 120.0 0.0 4500.0 44.0 233.0 10.0 4608.0 c 0 0 0 0 0 0 0 1459.0 1664.0 1924.0 4466.0 475.0 4447.0 4448.0 4403.0 1055.0 4402.0 1793.0 4354.0 839.0 g 0 0 0 0 0 0 0 1004.0 527.0 151.0 150.0 7053.0 63.0 107.0 110.0 348.0 114.0 6862.0 183.0 829.0 t 0 0 0 0 0 0 0 1953.0 2131.0 158.0 319.0 707.0 88.0 76.0 131.0 363.0 245.0 253.0 219.0 483.0

MA0696.1_shift8 (ZIC1)
; oligos_7nt_mkv5_m44 versus MA0696.1 (ZIC1); m=27/30; ncol2=14; w=10; offset=1; strand=D; shift=8; score=0.471088; --------gACCCCCyGCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1113.0 22722.0 836.0 1264.0 2606.0 0.0 185.0 22.0 2156.0 23.0 1215.0 73.0 c 0 0 0 0 0 0 0 0 3934.0 2660.0 28949.0 29217.0 25527.0 29399.0 29532.0 18412.0 45.0 27426.0 1757.0 24.0 g 0 0 0 0 0 0 0 0 25702.0 7408.0 58.0 204.0 327.0 4.0 10.0 0.0 31995.0 439.0 5531.0 34649.0 t 0 0 0 0 0 0 0 0 8960.0 23.0 125.0 281.0 927.0 7.0 14.0 10313.0 14.0 6735.0 27084.0 1.0

MA0697.1_shift8 (ZIC3)
; oligos_7nt_mkv5_m44 versus MA0697.1 (ZIC3); m=28/30; ncol2=15; w=10; offset=1; strand=D; shift=8; score=0.448842; --------gACCCCCYGCtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.0 163.0 7.0 7.0 22.0 0.0 0.0 0.0 22.0 4.0 18.0 3.0 c 0 0 0 0 0 0 0 0 50.0 32.0 203.0 204.0 188.0 209.0 206.0 142.0 5.0 178.0 26.0 0.0 g 0 0 0 0 0 0 0 0 163.0 43.0 0.0 3.0 0.0 0.0 0.0 0.0 217.0 6.0 53.0 225.0 t 0 0 0 0 0 0 0 0 69.0 0.0 4.0 7.0 19.0 0.0 0.0 61.0 2.0 29.0 163.0 3.0

MA0073.1_shift0 (RREB1)
; oligos_7nt_mkv5_m44 versus MA0073.1 (RREB1); m=29/30; ncol2=20; w=11; offset=-7; strand=D; shift=0; score=0.44763; MCMCmAMmCAmCMmCmmmsm ; cor=; Ncor= a 3.0 1.0 3.0 0.0 7.0 9.0 8.0 4.0 0.0 11.0 4.0 1.0 3.0 4.0 2.0 4.0 4.0 4.0 1.0 4.0 c 8.0 10.0 8.0 11.0 4.0 2.0 3.0 6.0 11.0 0.0 7.0 10.0 8.0 6.0 9.0 5.0 5.0 6.0 7.0 4.0 g 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0 3.0 2.0 t 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 1.0 1.0 0.0 1.0

MA0599.1_shift4 (KLF5)
; oligos_7nt_mkv5_m44 versus MA0599.1 (KLF5); m=30/30; ncol2=10; w=7; offset=-3; strand=D; shift=4; score=0.408332; ----gCCMCrCCCh------ ; cor=; Ncor= a 0 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 0 0 0 0 0 c 0 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 0 0 0 0 0 g 0 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 0 0 0 0 0 t 0 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0 0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m44_shift7 (oligos_7nt_mkv5_m44oligos_7nt_mkv5_m44)				; oligos_7nt_mkv5_m44 (oligos_7nt_mkv5_m44oligos_7nt_mkv5_m44); m=0 (reference); ncol1=11; shift=7; ncol=20; -------ccACCCCCAsc-- ; Alignment reference a 0 0 0 0 0 0 0 255 255 1588 2 0 0 0 1 1582 243 280 0 0 c 0 0 0 0 0 0 0 865 980 0 1586 1579 1583 1584 1549 0 699 753 0 0 g 0 0 0 0 0 0 0 219 201 0 0 9 5 4 34 6 423 329 0 0 t 0 0 0 0 0 0 0 249 152 0 0 0 0 0 4 0 223 226 0 0
MA1630.1_rc_shift7 (Znf281_rc)				; oligos_7nt_mkv5_m44 versus MA1630.1_rc (Znf281_rc); m=1/30; ncol2=11; w=11; offset=0; strand=R; shift=7; score=0.812632; -------CcTCCCCCAcc-- ; cor=; Ncor= a 0 0 0 0 0 0 0 315.0 1103.0 11.0 52.0 29.0 23.0 24.0 12.0 6298.0 745.0 954.0 0 0 c 0 0 0 0 0 0 0 5523.0 4312.0 8.0 6457.0 6402.0 6378.0 6356.0 6449.0 29.0 3751.0 3539.0 0 0 g 0 0 0 0 0 0 0 356.0 418.0 45.0 41.0 115.0 131.0 163.0 88.0 233.0 1076.0 878.0 0 0 t 0 0 0 0 0 0 0 374.0 735.0 6504.0 18.0 22.0 36.0 25.0 19.0 8.0 996.0 1197.0 0 0
MA0747.1_shift6 (SP8)				; oligos_7nt_mkv5_m44 versus MA0747.1 (SP8); m=2/30; ncol2=12; w=11; offset=-1; strand=D; shift=6; score=0.728121; ------rmCACgCCCmCy-- ; cor=; Ncor= a 0 0 0 0 0 0 52.0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 31.0 0 0 c 0 0 0 0 0 0 27.0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 52.0 0 0 g 0 0 0 0 0 0 78.0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 1.0 0 0 t 0 0 0 0 0 0 10.0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0 82.0 0 0
MA1564.1_shift6 (SP9)				; oligos_7nt_mkv5_m44 versus MA1564.1 (SP9); m=3/30; ncol2=12; w=11; offset=-1; strand=D; shift=6; score=0.693149; ------rcCmCGCCCmcy-- ; cor=; Ncor= a 0 0 0 0 0 0 834.0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 420.0 0 0 c 0 0 0 0 0 0 440.0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 1167.0 0 0 g 0 0 0 0 0 0 952.0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 204.0 0 0 t 0 0 0 0 0 0 226.0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0 660.0 0 0
MA0767.1_rc_shift8 (GCM2_rc)				; oligos_7nt_mkv5_m44 versus MA0767.1_rc (GCM2_rc); m=4/30; ncol2=10; w=10; offset=1; strand=R; shift=8; score=0.674419; --------yrCCCGCATv-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 240.0 1320.0 0.0 13.0 66.0 127.0 0.0 1320.0 45.0 427.0 0 0 c 0 0 0 0 0 0 0 0 341.0 91.0 1320.0 1320.0 1320.0 138.0 1320.0 24.0 299.0 375.0 0 0 g 0 0 0 0 0 0 0 0 140.0 533.0 0.0 0.0 1.0 1320.0 32.0 41.0 77.0 340.0 0 0 t 0 0 0 0 0 0 0 0 599.0 92.0 1.0 0.0 51.0 84.0 263.0 23.0 1320.0 179.0 0 0
MA1512.1_shift6 (KLF11)				; oligos_7nt_mkv5_m44 versus MA1512.1 (KLF11); m=5/30; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.64512; ------gcCACGCCCmC--- ; cor=; Ncor= a 0 0 0 0 0 0 1882.0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 0 0 0 c 0 0 0 0 0 0 2054.0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 0 0 0 g 0 0 0 0 0 0 3930.0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 0 0 0 t 0 0 0 0 0 0 1299.0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0 0 0 0
MA0746.2_shift5 (SP3)				; oligos_7nt_mkv5_m44 versus MA0746.2 (SP3); m=6/30; ncol2=13; w=11; offset=-2; strand=D; shift=5; score=0.634262; -----srCCACGCCCmCy-- ; cor=; Ncor= a 0 0 0 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0 0 0 c 0 0 0 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0 0 0 g 0 0 0 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0 0 0 t 0 0 0 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0 0 0
MA1511.1_shift6 (KLF10)				; oligos_7nt_mkv5_m44 versus MA1511.1 (KLF10); m=7/30; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.625248; ------gmCACrCCCmy--- ; cor=; Ncor= a 0 0 0 0 0 0 4746.0 6633.0 633.0 18751.0 238.0 13506.0 1.0 0.0 0.0 7545.0 934.0 0 0 0 c 0 0 0 0 0 0 2435.0 12654.0 19619.0 1663.0 19907.0 11.0 19995.0 19994.0 19244.0 11403.0 13118.0 0 0 0 g 0 0 0 0 0 0 14086.0 1299.0 98.0 1723.0 3.0 6234.0 2.0 0.0 0.0 587.0 770.0 0 0 0 t 0 0 0 0 0 0 1251.0 1373.0 485.0 6.0 157.0 543.0 0.0 0.0 2198.0 2686.0 6274.0 0 0 0
MA0056.2_shift6 (MZF1)				; oligos_7nt_mkv5_m44 versus MA0056.2 (MZF1); m=8/30; ncol2=13; w=11; offset=-1; strand=D; shift=6; score=0.611194; ------mwAATCCCCAchy- ; cor=; Ncor= a 0 0 0 0 0 0 2141.0 2477.0 5855.0 7149.0 106.0 100.0 135.0 111.0 117.0 6036.0 1693.0 2096.0 1762.0 0 c 0 0 0 0 0 0 2260.0 1944.0 1016.0 426.0 56.0 7949.0 7939.0 7919.0 7673.0 611.0 3007.0 2078.0 2206.0 0 g 0 0 0 0 0 0 1808.0 1543.0 999.0 385.0 98.0 100.0 54.0 58.0 83.0 484.0 1523.0 1482.0 1773.0 0 t 0 0 0 0 0 0 2033.0 2278.0 372.0 282.0 7982.0 93.0 114.0 154.0 369.0 1111.0 2019.0 2586.0 2501.0 0
MA1627.1_shift5 (Wt1)				; oligos_7nt_mkv5_m44 versus MA1627.1 (Wt1); m=9/30; ncol2=14; w=11; offset=-2; strand=D; shift=5; score=0.609737; -----cycCTCCCCCACmc- ; cor=; Ncor= a 0 0 0 0 0 876.0 667.0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 1675.0 520.0 0 c 0 0 0 0 0 1881.0 1630.0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 1350.0 2023.0 0 g 0 0 0 0 0 794.0 1161.0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 928.0 1038.0 0 t 0 0 0 0 0 1140.0 1233.0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0 738.0 1110.0 0
MA0741.1_shift6 (KLF16)				; oligos_7nt_mkv5_m44 versus MA0741.1 (KLF16); m=10/30; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.601322; ------gmCMCgCCCMC--- ; cor=; Ncor= a 0 0 0 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 0 c 0 0 0 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 0 g 0 0 0 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 0 t 0 0 0 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0 0
MA1578.1_shift9 (VEZF1)				; oligos_7nt_mkv5_m44 versus MA1578.1 (VEZF1); m=11/30; ncol2=10; w=9; offset=2; strand=D; shift=9; score=0.576766; ---------CCCCCCmytw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 406.0 44.0 240.0 333.0 0 c 0 0 0 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 357.0 550.0 171.0 173.0 0 g 0 0 0 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 110.0 70.0 211.0 152.0 0 t 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 125.0 334.0 377.0 339.0 0
MA0740.1_shift5 (KLF14)				; oligos_7nt_mkv5_m44 versus MA0740.1 (KLF14); m=12/30; ncol2=14; w=11; offset=-2; strand=D; shift=5; score=0.570883; -----krcCACGCCCmYyt- ; cor=; Ncor= a 0 0 0 0 0 430.0 1205.0 526.0 0.0 1708.0 2.0 69.0 0.0 0.0 0.0 716.0 32.0 280.0 649.0 0 c 0 0 0 0 0 215.0 73.0 1360.0 1599.0 136.0 1596.0 36.0 1602.0 1604.0 1609.0 961.0 1463.0 594.0 741.0 0 g 0 0 0 0 0 966.0 2280.0 96.0 10.0 58.0 0.0 2939.0 3.0 3.0 4.0 1.0 15.0 89.0 314.0 0 t 0 0 0 0 0 693.0 71.0 404.0 248.0 5.0 2.0 31.0 0.0 6.0 65.0 31.0 559.0 1041.0 1670.0 0
MA0162.4_shift7 (EGR1)				; oligos_7nt_mkv5_m44 versus MA0162.4 (EGR1); m=13/30; ncol2=14; w=11; offset=0; strand=D; shift=7; score=0.565483; -------ccmCGCCCACgCm ; cor=; Ncor= a 0 0 0 0 0 0 0 7087.0 3997.0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 8903.0 c 0 0 0 0 0 0 0 11610.0 14749.0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 10441.0 g 0 0 0 0 0 0 0 6621.0 7211.0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 6345.0 t 0 0 0 0 0 0 0 5280.0 4641.0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 4909.0
MA0753.2_shift4 (ZNF740)				; oligos_7nt_mkv5_m44 versus MA0753.2 (ZNF740); m=14/30; ncol2=13; w=10; offset=-3; strand=D; shift=4; score=0.560959; ----cyrCCCCCCCCAc--- ; cor=; Ncor= a 0 0 0 0 186.0 162.0 727.0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0 0 0 0 c 0 0 0 0 502.0 677.0 343.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0 0 0 0 g 0 0 0 0 182.0 72.0 1055.0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0 0 0 0 t 0 0 0 0 185.0 378.0 312.0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0 0 0 0
MA1107.2_shift4 (KLF9)				; oligos_7nt_mkv5_m44 versus MA1107.2 (KLF9); m=15/30; ncol2=16; w=11; offset=-3; strand=D; shift=4; score=0.553022; ----crgCCACACCCAChyc ; cor=; Ncor= a 0 0 0 0 5359.0 8015.0 2862.0 4664.0 287.0 21899.0 221.0 19187.0 224.0 2428.0 146.0 18837.0 792.0 6948.0 4110.0 5875.0 c 0 0 0 0 10412.0 5108.0 4342.0 17839.0 24709.0 2559.0 24863.0 1070.0 24365.0 22117.0 24682.0 4339.0 20644.0 8797.0 10520.0 9519.0 g 0 0 0 0 5200.0 7779.0 16852.0 1660.0 291.0 708.0 353.0 4340.0 735.0 605.0 205.0 852.0 1778.0 3289.0 4423.0 5681.0 t 0 0 0 0 4608.0 4677.0 1523.0 1416.0 292.0 413.0 142.0 982.0 255.0 429.0 546.0 1551.0 2365.0 6545.0 6526.0 4504.0
MA1517.1_shift5 (KLF6)				; oligos_7nt_mkv5_m44 versus MA1517.1 (KLF6); m=16/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.547345; -----srcCACRCCCm---- ; cor=; Ncor= a 0 0 0 0 0 443.0 1035.0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 0 0 0 c 0 0 0 0 0 624.0 490.0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 0 0 0 g 0 0 0 0 0 626.0 1157.0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 0 0 0 t 0 0 0 0 0 499.0 136.0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0 0 0 0
MA0155.1_rc_shift8 (INSM1_rc)				; oligos_7nt_mkv5_m44 versus MA0155.1_rc (INSM1_rc); m=17/30; ncol2=12; w=10; offset=1; strand=R; shift=8; score=0.543723; --------ygmCCCCwkrCA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2.0 5.0 6.0 0.0 0.0 0.0 0.0 8.0 3.0 13.0 4.0 19.0 c 0 0 0 0 0 0 0 0 12.0 0.0 16.0 24.0 24.0 23.0 24.0 0.0 0.0 3.0 20.0 4.0 g 0 0 0 0 0 0 0 0 0.0 16.0 2.0 0.0 0.0 1.0 0.0 0.0 15.0 8.0 0.0 0.0 t 0 0 0 0 0 0 0 0 10.0 3.0 0.0 0.0 0.0 0.0 0.0 16.0 6.0 0.0 0.0 1.0
MA0493.1_shift5 (Klf1)				; oligos_7nt_mkv5_m44 versus MA0493.1 (Klf1); m=18/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.541263; -----rrCCACACCCw---- ; cor=; Ncor= a 0 0 0 0 0 150.0 167.0 67.0 13.0 404.0 0.0 400.0 0.0 0.0 0.0 280.0 0 0 0 0 c 0 0 0 0 0 76.0 40.0 396.0 461.0 118.0 526.0 0.0 526.0 526.0 508.0 35.0 0 0 0 0 g 0 0 0 0 0 202.0 305.0 32.0 0.0 0.0 0.0 97.0 0.0 0.0 0.0 0.0 0 0 0 0 t 0 0 0 0 0 98.0 14.0 31.0 52.0 4.0 0.0 29.0 0.0 0.0 18.0 211.0 0 0 0 0
MA0742.1_shift5 (Klf12)				; oligos_7nt_mkv5_m44 versus MA0742.1 (Klf12); m=19/30; ncol2=15; w=11; offset=-2; strand=D; shift=5; score=0.538583; -----GrCCACGCCCwthtw ; cor=; Ncor= a 0 0 0 0 0 167.0 553.0 19.0 5.0 853.0 9.0 215.0 0.0 0.0 0.0 410.0 238.0 308.0 238.0 271.0 c 0 0 0 0 0 35.0 11.0 668.0 670.0 27.0 675.0 1.0 687.0 706.0 715.0 120.0 219.0 239.0 186.0 210.0 g 0 0 0 0 0 1158.0 531.0 8.0 12.0 2.0 0.0 1348.0 0.0 9.0 0.0 0.0 99.0 84.0 117.0 141.0 t 0 0 0 0 0 225.0 0.0 9.0 3.0 0.0 4.0 16.0 4.0 13.0 13.0 483.0 403.0 290.0 429.0 330.0
MA1515.1_shift5 (KLF2)				; oligos_7nt_mkv5_m44 versus MA1515.1 (KLF2); m=20/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.532903; -----srCCmCrCCCw---- ; cor=; Ncor= a 0 0 0 0 0 1054.0 2510.0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 1838.0 0 0 0 0 c 0 0 0 0 0 1376.0 1103.0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 1142.0 0 0 0 0 g 0 0 0 0 0 1320.0 2112.0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 389.0 0 0 0 0 t 0 0 0 0 0 872.0 433.0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 1253.0 0 0 0 0
MA0079.4_shift3 (SP1)				; oligos_7nt_mkv5_m44 versus MA0079.4 (SP1); m=21/30; ncol2=15; w=11; offset=-4; strand=D; shift=3; score=0.531806; ---ywrRCCACGCCCmCh-- ; cor=; Ncor= a 0 0 0 7866.0 28233.0 28895.0 14584.0 962.0 55.0 42154.0 0.0 959.0 0.0 8.0 0.0 24666.0 1195.0 12598.0 0 0 c 0 0 0 13273.0 1872.0 1530.0 0.0 48854.0 49649.0 12672.0 49660.0 0.0 49666.0 49662.0 48772.0 24196.0 37612.0 15606.0 0 0 g 0 0 0 9691.0 999.0 19477.0 37543.0 82.0 0.0 0.0 0.0 48957.0 0.0 0.0 0.0 15.0 919.0 3044.0 0 0 t 0 0 0 18833.0 19877.0 1184.0 153.0 124.0 1670.0 0.0 31.0 867.0 17.0 0.0 1440.0 1373.0 10717.0 18415.0 0 0
MA1516.1_shift5 (KLF3)				; oligos_7nt_mkv5_m44 versus MA1516.1 (KLF3); m=22/30; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.496645; -----grCCrCGCCCw---- ; cor=; Ncor= a 0 0 0 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 17029.0 0 0 0 0 c 0 0 0 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 10099.0 0 0 0 0 g 0 0 0 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 1514.0 0 0 0 0 t 0 0 0 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 14617.0 0 0 0 0
MA0736.1_shift8 (GLIS2)				; oligos_7nt_mkv5_m44 versus MA0736.1 (GLIS2); m=23/30; ncol2=14; w=10; offset=1; strand=D; shift=8; score=0.491355; --------kACCCCCCrCra ; cor=; Ncor= a 0 0 0 0 0 0 0 0 74.0 813.0 3.0 4.0 7.0 2.0 56.0 52.0 412.0 3.0 459.0 484.0 c 0 0 0 0 0 0 0 0 179.0 94.0 1072.0 1074.0 1074.0 1087.0 1061.0 1056.0 12.0 1080.0 36.0 16.0 g 0 0 0 0 0 0 0 0 929.0 130.0 3.0 0.0 0.0 0.0 0.0 1.0 915.0 28.0 909.0 234.0 t 0 0 0 0 0 0 0 0 439.0 1.0 5.0 1.0 14.0 0.0 4.0 99.0 50.0 69.0 64.0 228.0
MA1584.1_shift7 (ZIC5)				; oligos_7nt_mkv5_m44 versus MA1584.1 (ZIC5); m=24/30; ncol2=16; w=11; offset=0; strand=D; shift=7; score=0.491067; -------mgACCCCCCGCtG ; cor=; Ncor= a 0 0 0 0 0 0 0 6068.0 555.0 19266.0 250.0 147.0 1311.0 5.0 67.0 10.0 2110.0 2.0 2536.0 251.0 c 0 0 0 0 0 0 0 6877.0 3318.0 2320.0 21201.0 21163.0 20221.0 21263.0 21235.0 17685.0 21.0 19607.0 3844.0 8.0 g 0 0 0 0 0 0 0 5212.0 17329.0 2765.0 0.0 58.0 470.0 0.0 2.0 0.0 20412.0 235.0 3252.0 21153.0 t 0 0 0 0 0 0 0 3106.0 5687.0 0.0 17.0 57.0 328.0 1.0 2.0 3577.0 23.0 5843.0 18007.0 2.0
MA0039.4_shift9 (KLF4)				; oligos_7nt_mkv5_m44 versus MA0039.4 (KLF4); m=25/30; ncol2=12; w=9; offset=2; strand=D; shift=9; score=0.486165; ---------ssCCCCACCCh ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 12570.0 11487.0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 16264.0 c 0 0 0 0 0 0 0 0 0 17520.0 14038.0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 18249.0 g 0 0 0 0 0 0 0 0 0 14243.0 18473.0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 6292.0 t 0 0 0 0 0 0 0 0 0 11484.0 11819.0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 15012.0
MA0733.1_shift7 (EGR4)				; oligos_7nt_mkv5_m44 versus MA0733.1 (EGR4); m=26/30; ncol2=16; w=11; offset=0; strand=D; shift=7; score=0.481422; -------yymCGCCCACGCA ; cor=; Ncor= a 0 0 0 0 0 0 0 1167.0 1143.0 2745.0 101.0 556.0 11.0 120.0 0.0 4500.0 44.0 233.0 10.0 4608.0 c 0 0 0 0 0 0 0 1459.0 1664.0 1924.0 4466.0 475.0 4447.0 4448.0 4403.0 1055.0 4402.0 1793.0 4354.0 839.0 g 0 0 0 0 0 0 0 1004.0 527.0 151.0 150.0 7053.0 63.0 107.0 110.0 348.0 114.0 6862.0 183.0 829.0 t 0 0 0 0 0 0 0 1953.0 2131.0 158.0 319.0 707.0 88.0 76.0 131.0 363.0 245.0 253.0 219.0 483.0
MA0696.1_shift8 (ZIC1)				; oligos_7nt_mkv5_m44 versus MA0696.1 (ZIC1); m=27/30; ncol2=14; w=10; offset=1; strand=D; shift=8; score=0.471088; --------gACCCCCyGCTG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1113.0 22722.0 836.0 1264.0 2606.0 0.0 185.0 22.0 2156.0 23.0 1215.0 73.0 c 0 0 0 0 0 0 0 0 3934.0 2660.0 28949.0 29217.0 25527.0 29399.0 29532.0 18412.0 45.0 27426.0 1757.0 24.0 g 0 0 0 0 0 0 0 0 25702.0 7408.0 58.0 204.0 327.0 4.0 10.0 0.0 31995.0 439.0 5531.0 34649.0 t 0 0 0 0 0 0 0 0 8960.0 23.0 125.0 281.0 927.0 7.0 14.0 10313.0 14.0 6735.0 27084.0 1.0
MA0697.1_shift8 (ZIC3)				; oligos_7nt_mkv5_m44 versus MA0697.1 (ZIC3); m=28/30; ncol2=15; w=10; offset=1; strand=D; shift=8; score=0.448842; --------gACCCCCYGCtG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 20.0 163.0 7.0 7.0 22.0 0.0 0.0 0.0 22.0 4.0 18.0 3.0 c 0 0 0 0 0 0 0 0 50.0 32.0 203.0 204.0 188.0 209.0 206.0 142.0 5.0 178.0 26.0 0.0 g 0 0 0 0 0 0 0 0 163.0 43.0 0.0 3.0 0.0 0.0 0.0 0.0 217.0 6.0 53.0 225.0 t 0 0 0 0 0 0 0 0 69.0 0.0 4.0 7.0 19.0 0.0 0.0 61.0 2.0 29.0 163.0 3.0
MA0073.1_shift0 (RREB1)				; oligos_7nt_mkv5_m44 versus MA0073.1 (RREB1); m=29/30; ncol2=20; w=11; offset=-7; strand=D; shift=0; score=0.44763; MCMCmAMmCAmCMmCmmmsm ; cor=; Ncor= a 3.0 1.0 3.0 0.0 7.0 9.0 8.0 4.0 0.0 11.0 4.0 1.0 3.0 4.0 2.0 4.0 4.0 4.0 1.0 4.0 c 8.0 10.0 8.0 11.0 4.0 2.0 3.0 6.0 11.0 0.0 7.0 10.0 8.0 6.0 9.0 5.0 5.0 6.0 7.0 4.0 g 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0 3.0 2.0 t 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 1.0 1.0 0.0 1.0
MA0599.1_shift4 (KLF5)				; oligos_7nt_mkv5_m44 versus MA0599.1 (KLF5); m=30/30; ncol2=10; w=7; offset=-3; strand=D; shift=4; score=0.408332; ----gCCMCrCCCh------ ; cor=; Ncor= a 0 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 0 0 0 0 0 c 0 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 0 0 0 0 0 g 0 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 0 0 0 0 0 t 0 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0 0 0 0 0 0