| Matrix name | Aligned logos | cor |
Ncor |
Aligned matrices |
|---|
| oligos_7nt_mkv5_m7_shift4 (oligos_7nt_mkv5_m7oligos_7nt_mkv5_m7) |
 |
  |
  |
; oligos_7nt_mkv5_m7 (oligos_7nt_mkv5_m7oligos_7nt_mkv5_m7); m=0 (reference); ncol1=13; shift=4; ncol=17; ----csCCCCACCCCss
; Alignment reference
a 0 0 0 0 1136 914 68 60 82 99 4322 91 63 75 474 909 1082
c 0 0 0 0 2140 1858 5555 5535 5522 5510 234 5462 5518 5533 4654 2341 2187
g 0 0 0 0 1428 1906 89 129 143 72 1027 115 157 132 151 1695 1575
t 0 0 0 0 1097 1123 89 77 54 120 218 133 63 61 522 856 957
|
| MA0039.4_shift4 (KLF4) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0039.4 (KLF4); m=1/22; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.890173; ----ssCCCCACCChs-
; cor=; Ncor=
a 0 0 0 0 12570.0 11487.0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 16264.0 9959.0 0
c 0 0 0 0 17520.0 14038.0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 18249.0 19217.0 0
g 0 0 0 0 14243.0 18473.0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 6292.0 14422.0 0
t 0 0 0 0 11484.0 11819.0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 15012.0 12219.0 0
|
| MA1653.1_shift4 (ZNF148) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1653.1 (ZNF148); m=2/22; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.798317; ----ysCCCCTCCCcc-
; cor=; Ncor=
a 0 0 0 0 1399.0 1263.0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 0
c 0 0 0 0 4593.0 4057.0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 0
g 0 0 0 0 2241.0 3215.0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 0
t 0 0 0 0 2966.0 2664.0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0 0
|
| MA0746.2_shift4 (SP3) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0746.2 (SP3); m=3/22; ncol2=13; w=13; offset=0; strand=D; shift=4; score=0.74196; ----srCCACGCCCmCy
; cor=; Ncor=
a 0 0 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0
c 0 0 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0
g 0 0 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0
t 0 0 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0
|
| MA0753.2_shift4 (ZNF740) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0753.2 (ZNF740); m=4/22; ncol2=13; w=13; offset=0; strand=D; shift=4; score=0.728616; ----cyrCCCCCCCCAc
; cor=; Ncor=
a 0 0 0 0 186.0 162.0 727.0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0
c 0 0 0 0 502.0 677.0 343.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0
g 0 0 0 0 182.0 72.0 1055.0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0
t 0 0 0 0 185.0 378.0 312.0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0
|
| MA1513.1_shift5 (KLF15) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1513.1 (KLF15); m=5/22; ncol2=11; w=11; offset=1; strand=D; shift=5; score=0.723258; -----scCCCGCCCcs-
; cor=; Ncor=
a 0 0 0 0 0 1184.0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 1566.0 1067.0 0
c 0 0 0 0 0 2903.0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 6267.0 5013.0 0
g 0 0 0 0 0 5538.0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 1934.0 3124.0 0
t 0 0 0 0 0 1744.0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 1602.0 2165.0 0
|
| MA0599.1_shift5 (KLF5) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0599.1 (KLF5); m=6/22; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.715523; -----gCCMCrCCCh--
; cor=; Ncor=
a 0 0 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 0
c 0 0 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 0
g 0 0 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 0
t 0 0 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0 0
|
| MA1522.1_shift4 (MAZ) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1522.1 (MAZ); m=7/22; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.701454; ----ssCCCCTCCcc--
; cor=; Ncor=
a 0 0 0 0 2480.0 1819.0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 2016.0 0 0
c 0 0 0 0 5198.0 5068.0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 6775.0 0 0
g 0 0 0 0 4277.0 5163.0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 2539.0 0 0
t 0 0 0 0 3108.0 3013.0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 3733.0 0 0
|
| MA1564.1_shift5 (SP9) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1564.1 (SP9); m=8/22; ncol2=12; w=12; offset=1; strand=D; shift=5; score=0.701172; -----rcCmCGCCCmcy
; cor=; Ncor=
a 0 0 0 0 0 834.0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 420.0
c 0 0 0 0 0 440.0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 1167.0
g 0 0 0 0 0 952.0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 204.0
t 0 0 0 0 0 226.0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0 660.0
|
| MA1515.1_shift4 (KLF2) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1515.1 (KLF2); m=9/22; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.695953; ----srCCmCrCCCw--
; cor=; Ncor=
a 0 0 0 0 1054.0 2510.0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 1838.0 0 0
c 0 0 0 0 1376.0 1103.0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 1142.0 0 0
g 0 0 0 0 1320.0 2112.0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 389.0 0 0
t 0 0 0 0 872.0 433.0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 1253.0 0 0
|
| MA0741.1_shift5 (KLF16) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0741.1 (KLF16); m=10/22; ncol2=11; w=11; offset=1; strand=D; shift=5; score=0.67894; -----gmCMCgCCCMC-
; cor=; Ncor=
a 0 0 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0
c 0 0 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0
g 0 0 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0
t 0 0 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0
|
| MA0747.1_shift5 (SP8) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0747.1 (SP8); m=11/22; ncol2=12; w=12; offset=1; strand=D; shift=5; score=0.668503; -----rmCACgCCCmCy
; cor=; Ncor=
a 0 0 0 0 0 52.0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 31.0
c 0 0 0 0 0 27.0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 52.0
g 0 0 0 0 0 78.0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 1.0
t 0 0 0 0 0 10.0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0 82.0
|
| MA1511.1_shift5 (KLF10) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1511.1 (KLF10); m=12/22; ncol2=11; w=11; offset=1; strand=D; shift=5; score=0.66685; -----gmCACrCCCmy-
; cor=; Ncor=
a 0 0 0 0 0 4746.0 6633.0 633.0 18751.0 238.0 13506.0 1.0 0.0 0.0 7545.0 934.0 0
c 0 0 0 0 0 2435.0 12654.0 19619.0 1663.0 19907.0 11.0 19995.0 19994.0 19244.0 11403.0 13118.0 0
g 0 0 0 0 0 14086.0 1299.0 98.0 1723.0 3.0 6234.0 2.0 0.0 0.0 587.0 770.0 0
t 0 0 0 0 0 1251.0 1373.0 485.0 6.0 157.0 543.0 0.0 0.0 2198.0 2686.0 6274.0 0
|
| MA0493.1_shift4 (Klf1) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0493.1 (Klf1); m=13/22; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.660433; ----rrCCACACCCw--
; cor=; Ncor=
a 0 0 0 0 150.0 167.0 67.0 13.0 404.0 0.0 400.0 0.0 0.0 0.0 280.0 0 0
c 0 0 0 0 76.0 40.0 396.0 461.0 118.0 526.0 0.0 526.0 526.0 508.0 35.0 0 0
g 0 0 0 0 202.0 305.0 32.0 0.0 0.0 0.0 97.0 0.0 0.0 0.0 0.0 0 0
t 0 0 0 0 98.0 14.0 31.0 52.0 4.0 0.0 29.0 0.0 0.0 18.0 211.0 0 0
|
| MA1517.1_shift4 (KLF6) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1517.1 (KLF6); m=14/22; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.627096; ----srcCACRCCCm--
; cor=; Ncor=
a 0 0 0 0 443.0 1035.0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 0
c 0 0 0 0 624.0 490.0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 0
g 0 0 0 0 626.0 1157.0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 0
t 0 0 0 0 499.0 136.0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0 0
|
| MA1512.1_shift5 (KLF11) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1512.1 (KLF11); m=15/22; ncol2=11; w=11; offset=1; strand=D; shift=5; score=0.622357; -----gcCACGCCCmC-
; cor=; Ncor=
a 0 0 0 0 0 1882.0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 0
c 0 0 0 0 0 2054.0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 0
g 0 0 0 0 0 3930.0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 0
t 0 0 0 0 0 1299.0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0 0
|
| MA0079.4_shift2 (SP1) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0079.4 (SP1); m=16/22; ncol2=15; w=13; offset=-2; strand=D; shift=2; score=0.622133; --ywrRCCACGCCCmCh
; cor=; Ncor=
a 0 0 7866.0 28233.0 28895.0 14584.0 962.0 55.0 42154.0 0.0 959.0 0.0 8.0 0.0 24666.0 1195.0 12598.0
c 0 0 13273.0 1872.0 1530.0 0.0 48854.0 49649.0 12672.0 49660.0 0.0 49666.0 49662.0 48772.0 24196.0 37612.0 15606.0
g 0 0 9691.0 999.0 19477.0 37543.0 82.0 0.0 0.0 0.0 48957.0 0.0 0.0 0.0 15.0 919.0 3044.0
t 0 0 18833.0 19877.0 1184.0 153.0 124.0 1670.0 0.0 31.0 867.0 17.0 0.0 1440.0 1373.0 10717.0 18415.0
|
| MA1107.2_shift3 (KLF9) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1107.2 (KLF9); m=17/22; ncol2=16; w=13; offset=-1; strand=D; shift=3; score=0.598427; ---crgCCACACCCACh
; cor=; Ncor=
a 0 0 0 5359.0 8015.0 2862.0 4664.0 287.0 21899.0 221.0 19187.0 224.0 2428.0 146.0 18837.0 792.0 6948.0
c 0 0 0 10412.0 5108.0 4342.0 17839.0 24709.0 2559.0 24863.0 1070.0 24365.0 22117.0 24682.0 4339.0 20644.0 8797.0
g 0 0 0 5200.0 7779.0 16852.0 1660.0 291.0 708.0 353.0 4340.0 735.0 605.0 205.0 852.0 1778.0 3289.0
t 0 0 0 4608.0 4677.0 1523.0 1416.0 292.0 413.0 142.0 982.0 255.0 429.0 546.0 1551.0 2365.0 6545.0
|
| MA0516.2_shift1 (SP2) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0516.2 (SP2); m=18/22; ncol2=17; w=13; offset=-3; strand=D; shift=1; score=0.585594; -mTAAGyCCCGCCCmCy
; cor=; Ncor=
a 0 256.0 53.0 613.0 753.0 54.0 34.0 14.0 16.0 4.0 82.0 0.0 5.0 23.0 402.0 22.0 109.0
c 0 308.0 171.0 76.0 84.0 127.0 456.0 774.0 786.0 788.0 52.0 795.0 793.0 774.0 390.0 679.0 221.0
g 0 123.0 57.0 0.0 33.0 791.0 8.0 1.0 13.0 22.0 780.0 0.0 26.0 0.0 22.0 1.0 0.0
t 0 106.0 608.0 180.0 67.0 43.0 327.0 0.0 8.0 12.0 45.0 18.0 7.0 27.0 17.0 101.0 503.0
|
| MA1578.1_shift7 (VEZF1) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1578.1 (VEZF1); m=19/22; ncol2=10; w=10; offset=3; strand=D; shift=7; score=0.563731; -------CCCCCCmytw
; cor=; Ncor=
a 0 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 406.0 44.0 240.0 333.0
c 0 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 357.0 550.0 171.0 173.0
g 0 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 110.0 70.0 211.0 152.0
t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 125.0 334.0 377.0 339.0
|
| MA0685.1_shift2 (SP4) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA0685.1 (SP4); m=20/22; ncol2=17; w=13; offset=-2; strand=D; shift=2; score=0.542798; --ywrGCCACGCCCmCt
; cor=; Ncor=
a 0 0 621.0 2173.0 2600.0 939.0 260.0 2.0 3004.0 2.0 10.0 2.0 3.0 0.0 1840.0 113.0 1140.0
c 0 0 1405.0 156.0 146.0 6.0 4443.0 4492.0 991.0 4662.0 14.0 4681.0 4732.0 4667.0 2430.0 4276.0 897.0
g 0 0 823.0 65.0 1639.0 4774.0 0.0 5.0 3.0 0.0 5444.0 4.0 2.0 3.0 9.0 21.0 234.0
t 0 0 1622.0 1809.0 199.0 16.0 4.0 135.0 0.0 0.0 55.0 0.0 0.0 72.0 67.0 1067.0 3043.0
|
| MA1630.1_rc_shift2 (Znf281_rc) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1630.1_rc (Znf281_rc); m=21/22; ncol2=11; w=9; offset=-2; strand=R; shift=2; score=0.477984; --CcTCCCCCAcc----
; cor=; Ncor=
a 0 0 315.0 1103.0 11.0 52.0 29.0 23.0 24.0 12.0 6298.0 745.0 954.0 0 0 0 0
c 0 0 5523.0 4312.0 8.0 6457.0 6402.0 6378.0 6356.0 6449.0 29.0 3751.0 3539.0 0 0 0 0
g 0 0 356.0 418.0 45.0 41.0 115.0 131.0 163.0 88.0 233.0 1076.0 878.0 0 0 0 0
t 0 0 374.0 735.0 6504.0 18.0 22.0 36.0 25.0 19.0 8.0 996.0 1197.0 0 0 0 0
|
| MA1627.1_shift0 (Wt1) |
 |
|
|
; oligos_7nt_mkv5_m7 versus MA1627.1 (Wt1); m=22/22; ncol2=14; w=10; offset=-4; strand=D; shift=0; score=0.439813; cycCTCCCCCACmc---
; cor=; Ncor=
a 876.0 667.0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 1675.0 520.0 0 0 0
c 1881.0 1630.0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 1350.0 2023.0 0 0 0
g 794.0 1161.0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 928.0 1038.0 0 0 0
t 1140.0 1233.0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0 738.0 1110.0 0 0 0
|