One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_8nt_mkv6_m32/peak-motifs_oligos_8nt_mkv6_m32.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_8nt_mkv6_m32/peak-motifs_oligos_8nt_mkv6_m32_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv6_m32_shift1 ; 23 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_8nt_mkv6_m32_shift1 (oligos_8nt_mkv6_m32oligos_8nt_mkv6_m32)
; oligos_8nt_mkv6_m32 (oligos_8nt_mkv6_m32oligos_8nt_mkv6_m32); m=0 (reference); ncol1=12; shift=1; ncol=18; -ssCGGCCaCGss----- ; Alignment reference a 0 416 503 36 6 91 111 62 2378 8 23 419 464 0 0 0 0 0 c 0 1559 1183 3488 230 307 3240 3284 341 3609 183 1486 1435 0 0 0 0 0 g 0 1165 1565 125 3428 3183 183 256 828 19 3439 1231 1329 0 0 0 0 0 t 0 534 423 25 10 93 140 72 127 38 29 538 446 0 0 0 0 0

MA0472.2_shift2 (EGR2)
; oligos_8nt_mkv6_m32 versus MA0472.2 (EGR2); m=1/22; ncol2=11; w=11; offset=1; strand=D; shift=2; score=0.680725; --mCGCCCACGCa----- ; cor=; Ncor= a 0 0 1157.0 0.0 295.0 6.0 24.0 0.0 2147.0 0.0 106.0 4.0 1731.0 0 0 0 0 0 c 0 0 679.0 1551.0 0.0 1558.0 1554.0 1468.0 110.0 1573.0 0.0 1585.0 157.0 0 0 0 0 0 g 0 0 94.0 28.0 3731.0 25.0 15.0 38.0 26.0 2.0 4034.0 20.0 542.0 0 0 0 0 0 t 0 0 142.0 73.0 222.0 29.0 13.0 277.0 2.0 23.0 171.0 115.0 430.0 0 0 0 0 0

MA0162.4_shift0 (EGR1)
; oligos_8nt_mkv6_m32 versus MA0162.4 (EGR1); m=2/22; ncol2=14; w=12; offset=-1; strand=D; shift=0; score=0.653426; ccmCGCCCACgCms---- ; cor=; Ncor= a 7087.0 3997.0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 8903.0 3809.0 0 0 0 0 c 11610.0 14749.0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 10441.0 13686.0 0 0 0 0 g 6621.0 7211.0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 6345.0 7852.0 0 0 0 0 t 5280.0 4641.0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 4909.0 5251.0 0 0 0 0

MA0732.1_shift0 (EGR3)
; oligos_8nt_mkv6_m32 versus MA0732.1 (EGR3); m=3/22; ncol2=15; w=12; offset=-1; strand=D; shift=0; score=0.572581; yhmCGCCCMCGCAyt--- ; cor=; Ncor= a 337.0 444.0 1031.0 2.0 66.0 0.0 0.0 0.0 1159.0 0.0 39.0 2.0 1262.0 406.0 396.0 0 0 0 c 645.0 485.0 701.0 1855.0 32.0 1856.0 1858.0 1823.0 455.0 1875.0 28.0 1899.0 54.0 600.0 346.0 0 0 0 g 278.0 191.0 10.0 0.0 2158.0 2.0 0.0 7.0 11.0 7.0 2152.0 1.0 168.0 110.0 230.0 0 0 0 t 470.0 540.0 20.0 13.0 36.0 0.0 10.0 80.0 4.0 2.0 26.0 21.0 80.0 549.0 683.0 0 0 0

MA0733.1_shift0 (EGR4)
; oligos_8nt_mkv6_m32 versus MA0733.1 (EGR4); m=4/22; ncol2=16; w=12; offset=-1; strand=D; shift=0; score=0.529784; yymCGCCCACGCAhwt-- ; cor=; Ncor= a 1167.0 1143.0 2745.0 101.0 556.0 11.0 120.0 0.0 4500.0 44.0 233.0 10.0 4608.0 1721.0 1483.0 1191.0 0 0 c 1459.0 1664.0 1924.0 4466.0 475.0 4447.0 4448.0 4403.0 1055.0 4402.0 1793.0 4354.0 839.0 1399.0 819.0 1118.0 0 0 g 1004.0 527.0 151.0 150.0 7053.0 63.0 107.0 110.0 348.0 114.0 6862.0 183.0 829.0 409.0 655.0 935.0 0 0 t 1953.0 2131.0 158.0 319.0 707.0 88.0 76.0 131.0 363.0 245.0 253.0 219.0 483.0 1778.0 2762.0 2422.0 0 0

MA1516.1_shift4 (KLF3)
; oligos_8nt_mkv6_m32 versus MA1516.1 (KLF3); m=5/22; ncol2=11; w=9; offset=3; strand=D; shift=4; score=0.513871; ----grCCrCGCCCw--- ; cor=; Ncor= a 0 0 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 17029.0 0 0 0 c 0 0 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 10099.0 0 0 0 g 0 0 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 1514.0 0 0 0 t 0 0 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 14617.0 0 0 0

MA0608.1_shift5 (Creb3l2)
; oligos_8nt_mkv6_m32 versus MA0608.1 (Creb3l2); m=6/22; ncol2=9; w=8; offset=4; strand=D; shift=5; score=0.486474; -----KmCACGTGd---- ; cor=; Ncor= a 0 0 0 0 0 2.0 250.0 1.0 996.0 1.0 1.0 1.0 1.0 250.0 0 0 0 0 c 0 0 0 0 0 2.0 623.0 872.0 1.0 996.0 1.0 1.0 143.0 2.0 0 0 0 0 g 0 0 0 0 0 745.0 1.0 126.0 1.0 1.0 996.0 1.0 854.0 250.0 0 0 0 0 t 0 0 0 0 0 250.0 126.0 1.0 1.0 1.0 1.0 996.0 1.0 498.0 0 0 0 0

MA1099.2_rc_shift5 (HES1_rc)
; oligos_8nt_mkv6_m32 versus MA1099.2_rc (HES1_rc); m=7/22; ncol2=10; w=8; offset=4; strand=R; shift=5; score=0.452356; -----gvCACGyGcc--- ; cor=; Ncor= a 0 0 0 0 0 3216.0 4837.0 53.0 18526.0 0.0 791.0 232.0 18.0 8007.0 4239.0 0 0 0 c 0 0 0 0 0 6013.0 6360.0 18526.0 0.0 18526.0 0.0 9081.0 0.0 18526.0 18526.0 0 0 0 g 0 0 0 0 0 12513.0 6203.0 0.0 4057.0 0.0 18526.0 0.0 18526.0 2072.0 3492.0 0 0 0 t 0 0 0 0 0 2742.0 1126.0 1.0 253.0 21.0 0.0 9446.0 464.0 5858.0 3321.0 0 0 0

MA1517.1_shift4 (KLF6)
; oligos_8nt_mkv6_m32 versus MA1517.1 (KLF6); m=8/22; ncol2=11; w=9; offset=3; strand=D; shift=4; score=0.452005; ----srcCACRCCCm--- ; cor=; Ncor= a 0 0 0 0 443.0 1035.0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 0 0 c 0 0 0 0 624.0 490.0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 0 0 g 0 0 0 0 626.0 1157.0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 0 0 t 0 0 0 0 499.0 136.0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0 0 0

MA0746.2_shift4 (SP3)
; oligos_8nt_mkv6_m32 versus MA0746.2 (SP3); m=9/22; ncol2=13; w=9; offset=3; strand=D; shift=4; score=0.439972; ----srCCACGCCCmCy- ; cor=; Ncor= a 0 0 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0 0 c 0 0 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0 0 g 0 0 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0 0 t 0 0 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0 0

MA0006.1_rc_shift7 (Ahr::Arnt_rc)
; oligos_8nt_mkv6_m32 versus MA0006.1_rc (Ahr::Arnt_rc); m=10/22; ncol2=6; w=6; offset=6; strand=R; shift=7; score=0.438455; -------CACGCr----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 11.0 0 0 0 0 0 c 0 0 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 2.0 0 0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 8.0 0 0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 0

MA1474.1_shift4 (CREB3L4)
; oligos_8nt_mkv6_m32 versus MA1474.1 (CREB3L4); m=11/22; ncol2=12; w=9; offset=3; strand=D; shift=4; score=0.438339; ----ygCCACGTCAyc-- ; cor=; Ncor= a 0 0 0 0 876.0 828.0 1118.0 260.0 3891.0 13.0 306.0 53.0 500.0 3891.0 284.0 664.0 0 0 c 0 0 0 0 1802.0 247.0 3891.0 3891.0 50.0 3891.0 65.0 301.0 3891.0 515.0 2584.0 1740.0 0 0 g 0 0 0 0 959.0 3891.0 165.0 112.0 208.0 20.0 3891.0 63.0 690.0 769.0 729.0 788.0 0 0 t 0 0 0 0 2090.0 1403.0 246.0 221.0 8.0 130.0 0.0 3891.0 279.0 275.0 1308.0 698.0 0 0

MA0104.4_shift4 (MYCN)
; oligos_8nt_mkv6_m32 versus MA0104.4 (MYCN); m=12/22; ncol2=12; w=9; offset=3; strand=D; shift=4; score=0.428972; ----sgCCACGTGGcs-- ; cor=; Ncor= a 0 0 0 0 1488.0 1734.0 480.0 34.0 6369.0 22.0 323.0 274.0 7.0 420.0 1101.0 1148.0 0 0 c 0 0 0 0 1894.0 1550.0 5341.0 6929.0 56.0 6517.0 122.0 285.0 14.0 743.0 2599.0 2454.0 0 0 g 0 0 0 0 2454.0 2599.0 743.0 14.0 285.0 122.0 6517.0 56.0 6929.0 5341.0 1550.0 1894.0 0 0 t 0 0 0 0 1148.0 1101.0 420.0 7.0 274.0 323.0 22.0 6369.0 34.0 480.0 1734.0 1488.0 0 0

MA0147.3_shift4 (MYC)
; oligos_8nt_mkv6_m32 versus MA0147.3 (MYC); m=13/22; ncol2=12; w=9; offset=3; strand=D; shift=4; score=0.422091; ----ssCCACGTGcys-- ; cor=; Ncor= a 0 0 0 0 1038.0 1019.0 438.0 44.0 4600.0 54.0 169.0 59.0 23.0 419.0 961.0 755.0 0 0 c 0 0 0 0 1345.0 1287.0 3746.0 4840.0 59.0 4525.0 157.0 162.0 56.0 2801.0 1524.0 1785.0 0 0 g 0 0 0 0 1649.0 1757.0 472.0 31.0 170.0 70.0 4578.0 63.0 4817.0 1198.0 1036.0 1348.0 0 0 t 0 0 0 0 910.0 879.0 286.0 27.0 113.0 293.0 38.0 4658.0 46.0 524.0 1421.0 1054.0 0 0

MA1512.1_shift5 (KLF11)
; oligos_8nt_mkv6_m32 versus MA1512.1 (KLF11); m=14/22; ncol2=11; w=8; offset=4; strand=D; shift=5; score=0.41597; -----gcCACGCCCmC-- ; cor=; Ncor= a 0 0 0 0 0 1882.0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 0 0 c 0 0 0 0 0 2054.0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 0 0 g 0 0 0 0 0 3930.0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 0 0 t 0 0 0 0 0 1299.0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0 0 0

MA0742.1_shift4 (Klf12)
; oligos_8nt_mkv6_m32 versus MA0742.1 (Klf12); m=15/22; ncol2=15; w=9; offset=3; strand=D; shift=4; score=0.41507; ----GrCCACGCCCwtht ; cor=; Ncor= a 0 0 0 0 167.0 553.0 19.0 5.0 853.0 9.0 215.0 0.0 0.0 0.0 410.0 238.0 308.0 238.0 c 0 0 0 0 35.0 11.0 668.0 670.0 27.0 675.0 1.0 687.0 706.0 715.0 120.0 219.0 239.0 186.0 g 0 0 0 0 1158.0 531.0 8.0 12.0 2.0 0.0 1348.0 0.0 9.0 0.0 0.0 99.0 84.0 117.0 t 0 0 0 0 225.0 0.0 9.0 3.0 0.0 4.0 16.0 4.0 13.0 13.0 483.0 403.0 290.0 429.0

MA0259.1_rc_shift6 (ARNT::HIF1A_rc)
; oligos_8nt_mkv6_m32 versus MA0259.1_rc (ARNT::HIF1A_rc); m=16/22; ncol2=8; w=7; offset=5; strand=R; shift=6; score=0.414992; ------gCACGTvb---- ; cor=; Ncor= a 0 0 0 0 0 0 15.0 0.0 104.0 0.0 1.0 1.0 31.0 0.0 0 0 0 0 c 0 0 0 0 0 0 20.0 104.0 0.0 104.0 0.0 23.0 34.0 49.0 0 0 0 0 g 0 0 0 0 0 0 51.0 0.0 0.0 0.0 103.0 2.0 29.0 28.0 0 0 0 0 t 0 0 0 0 0 0 18.0 0.0 0.0 0.0 0.0 78.0 10.0 27.0 0 0 0 0

MA0740.1_shift4 (KLF14)
; oligos_8nt_mkv6_m32 versus MA0740.1 (KLF14); m=17/22; ncol2=14; w=9; offset=3; strand=D; shift=4; score=0.41366; ----krcCACGCCCmYyt ; cor=; Ncor= a 0 0 0 0 430.0 1205.0 526.0 0.0 1708.0 2.0 69.0 0.0 0.0 0.0 716.0 32.0 280.0 649.0 c 0 0 0 0 215.0 73.0 1360.0 1599.0 136.0 1596.0 36.0 1602.0 1604.0 1609.0 961.0 1463.0 594.0 741.0 g 0 0 0 0 966.0 2280.0 96.0 10.0 58.0 0.0 2939.0 3.0 3.0 4.0 1.0 15.0 89.0 314.0 t 0 0 0 0 693.0 71.0 404.0 248.0 5.0 2.0 31.0 0.0 6.0 65.0 31.0 559.0 1041.0 1670.0

MA0649.1_shift5 (HEY2)
; oligos_8nt_mkv6_m32 versus MA0649.1 (HEY2); m=18/22; ncol2=10; w=8; offset=4; strand=D; shift=5; score=0.411521; -----GrCACGTGyc--- ; cor=; Ncor= a 0 0 0 0 0 107.0 651.0 84.0 1800.0 7.0 27.0 36.0 0.0 50.0 285.0 0 0 0 c 0 0 0 0 0 99.0 305.0 1800.0 0.0 1800.0 72.0 120.0 34.0 1047.0 869.0 0 0 0 g 0 0 0 0 0 1800.0 620.0 83.0 128.0 0.0 1800.0 0.0 1800.0 128.0 382.0 0 0 0 t 0 0 0 0 0 101.0 224.0 58.0 0.0 0.0 0.0 1800.0 30.0 753.0 264.0 0 0 0

MA0741.1_shift5 (KLF16)
; oligos_8nt_mkv6_m32 versus MA0741.1 (KLF16); m=19/22; ncol2=11; w=8; offset=4; strand=D; shift=5; score=0.408431; -----gmCMCgCCCMC-- ; cor=; Ncor= a 0 0 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 c 0 0 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 g 0 0 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 t 0 0 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0

MA0616.2_rc_shift5 (HES2_rc)
; oligos_8nt_mkv6_m32 versus MA0616.2_rc (HES2_rc); m=20/22; ncol2=10; w=8; offset=4; strand=R; shift=5; score=0.404165; -----grCACGTGcC--- ; cor=; Ncor= a 0 0 0 0 0 1319.0 3849.0 0.0 8483.0 0.0 129.0 0.0 73.0 1581.0 798.0 0 0 0 c 0 0 0 0 0 1735.0 1289.0 8483.0 0.0 8483.0 0.0 2028.0 85.0 8483.0 8483.0 0 0 0 g 0 0 0 0 0 4464.0 4634.0 15.0 1098.0 0.0 8483.0 0.0 8483.0 1107.0 1193.0 0 0 0 t 0 0 0 0 0 966.0 512.0 53.0 0.0 0.0 0.0 6455.0 118.0 1501.0 775.0 0 0 0

MA0823.1_shift5 (HEY1)
; oligos_8nt_mkv6_m32 versus MA0823.1 (HEY1); m=21/22; ncol2=10; w=8; offset=4; strand=D; shift=5; score=0.402421; -----grCACGTGyc--- ; cor=; Ncor= a 0 0 0 0 0 437.0 1373.0 1.0 3338.0 0.0 0.0 0.0 32.0 333.0 475.0 0 0 0 c 0 0 0 0 0 761.0 656.0 3338.0 30.0 3338.0 18.0 474.0 19.0 1762.0 2172.0 0 0 0 g 0 0 0 0 0 1788.0 1199.0 3.0 123.0 0.0 3338.0 10.0 3338.0 380.0 373.0 0 0 0 t 0 0 0 0 0 352.0 110.0 15.0 21.0 0.0 0.0 3338.0 22.0 863.0 318.0 0 0 0

MA0004.1_rc_shift7 (Arnt_rc)
; oligos_8nt_mkv6_m32 versus MA0004.1_rc (Arnt_rc); m=22/22; ncol2=6; w=6; offset=6; strand=R; shift=7; score=0.400969; -------CACGTG----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 0 0 0 0 0 c 0 0 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 0 0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 0 0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0 0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_8nt_mkv6_m32_shift1 (oligos_8nt_mkv6_m32oligos_8nt_mkv6_m32)				; oligos_8nt_mkv6_m32 (oligos_8nt_mkv6_m32oligos_8nt_mkv6_m32); m=0 (reference); ncol1=12; shift=1; ncol=18; -ssCGGCCaCGss----- ; Alignment reference a 0 416 503 36 6 91 111 62 2378 8 23 419 464 0 0 0 0 0 c 0 1559 1183 3488 230 307 3240 3284 341 3609 183 1486 1435 0 0 0 0 0 g 0 1165 1565 125 3428 3183 183 256 828 19 3439 1231 1329 0 0 0 0 0 t 0 534 423 25 10 93 140 72 127 38 29 538 446 0 0 0 0 0
MA0472.2_shift2 (EGR2)				; oligos_8nt_mkv6_m32 versus MA0472.2 (EGR2); m=1/22; ncol2=11; w=11; offset=1; strand=D; shift=2; score=0.680725; --mCGCCCACGCa----- ; cor=; Ncor= a 0 0 1157.0 0.0 295.0 6.0 24.0 0.0 2147.0 0.0 106.0 4.0 1731.0 0 0 0 0 0 c 0 0 679.0 1551.0 0.0 1558.0 1554.0 1468.0 110.0 1573.0 0.0 1585.0 157.0 0 0 0 0 0 g 0 0 94.0 28.0 3731.0 25.0 15.0 38.0 26.0 2.0 4034.0 20.0 542.0 0 0 0 0 0 t 0 0 142.0 73.0 222.0 29.0 13.0 277.0 2.0 23.0 171.0 115.0 430.0 0 0 0 0 0
MA0162.4_shift0 (EGR1)				; oligos_8nt_mkv6_m32 versus MA0162.4 (EGR1); m=2/22; ncol2=14; w=12; offset=-1; strand=D; shift=0; score=0.653426; ccmCGCCCACgCms---- ; cor=; Ncor= a 7087.0 3997.0 14508.0 642.0 5110.0 227.0 1440.0 314.0 22297.0 153.0 4696.0 969.0 8903.0 3809.0 0 0 0 0 c 11610.0 14749.0 10303.0 28403.0 1131.0 29338.0 27321.0 28958.0 5420.0 29507.0 2806.0 25196.0 10441.0 13686.0 0 0 0 0 g 6621.0 7211.0 3854.0 756.0 22237.0 665.0 1455.0 698.0 2122.0 699.0 20544.0 2157.0 6345.0 7852.0 0 0 0 0 t 5280.0 4641.0 1933.0 797.0 2120.0 368.0 382.0 628.0 759.0 239.0 2552.0 2276.0 4909.0 5251.0 0 0 0 0
MA0732.1_shift0 (EGR3)				; oligos_8nt_mkv6_m32 versus MA0732.1 (EGR3); m=3/22; ncol2=15; w=12; offset=-1; strand=D; shift=0; score=0.572581; yhmCGCCCMCGCAyt--- ; cor=; Ncor= a 337.0 444.0 1031.0 2.0 66.0 0.0 0.0 0.0 1159.0 0.0 39.0 2.0 1262.0 406.0 396.0 0 0 0 c 645.0 485.0 701.0 1855.0 32.0 1856.0 1858.0 1823.0 455.0 1875.0 28.0 1899.0 54.0 600.0 346.0 0 0 0 g 278.0 191.0 10.0 0.0 2158.0 2.0 0.0 7.0 11.0 7.0 2152.0 1.0 168.0 110.0 230.0 0 0 0 t 470.0 540.0 20.0 13.0 36.0 0.0 10.0 80.0 4.0 2.0 26.0 21.0 80.0 549.0 683.0 0 0 0
MA0733.1_shift0 (EGR4)				; oligos_8nt_mkv6_m32 versus MA0733.1 (EGR4); m=4/22; ncol2=16; w=12; offset=-1; strand=D; shift=0; score=0.529784; yymCGCCCACGCAhwt-- ; cor=; Ncor= a 1167.0 1143.0 2745.0 101.0 556.0 11.0 120.0 0.0 4500.0 44.0 233.0 10.0 4608.0 1721.0 1483.0 1191.0 0 0 c 1459.0 1664.0 1924.0 4466.0 475.0 4447.0 4448.0 4403.0 1055.0 4402.0 1793.0 4354.0 839.0 1399.0 819.0 1118.0 0 0 g 1004.0 527.0 151.0 150.0 7053.0 63.0 107.0 110.0 348.0 114.0 6862.0 183.0 829.0 409.0 655.0 935.0 0 0 t 1953.0 2131.0 158.0 319.0 707.0 88.0 76.0 131.0 363.0 245.0 253.0 219.0 483.0 1778.0 2762.0 2422.0 0 0
MA1516.1_shift4 (KLF3)				; oligos_8nt_mkv6_m32 versus MA1516.1 (KLF3); m=5/22; ncol2=11; w=9; offset=3; strand=D; shift=4; score=0.513871; ----grCCrCGCCCw--- ; cor=; Ncor= a 0 0 0 0 7717.0 24771.0 1442.0 298.0 26757.0 2261.0 4245.0 202.0 83.0 77.0 17029.0 0 0 0 c 0 0 0 0 2655.0 615.0 43259.0 43259.0 707.0 43259.0 334.0 43259.0 43259.0 43259.0 10099.0 0 0 0 g 0 0 0 0 26568.0 18489.0 1954.0 248.0 16503.0 21.0 43259.0 31.0 29.0 48.0 1514.0 0 0 0 t 0 0 0 0 6319.0 207.0 705.0 335.0 419.0 1409.0 1212.0 0.0 0.0 1218.0 14617.0 0 0 0
MA0608.1_shift5 (Creb3l2)				; oligos_8nt_mkv6_m32 versus MA0608.1 (Creb3l2); m=6/22; ncol2=9; w=8; offset=4; strand=D; shift=5; score=0.486474; -----KmCACGTGd---- ; cor=; Ncor= a 0 0 0 0 0 2.0 250.0 1.0 996.0 1.0 1.0 1.0 1.0 250.0 0 0 0 0 c 0 0 0 0 0 2.0 623.0 872.0 1.0 996.0 1.0 1.0 143.0 2.0 0 0 0 0 g 0 0 0 0 0 745.0 1.0 126.0 1.0 1.0 996.0 1.0 854.0 250.0 0 0 0 0 t 0 0 0 0 0 250.0 126.0 1.0 1.0 1.0 1.0 996.0 1.0 498.0 0 0 0 0
MA1099.2_rc_shift5 (HES1_rc)				; oligos_8nt_mkv6_m32 versus MA1099.2_rc (HES1_rc); m=7/22; ncol2=10; w=8; offset=4; strand=R; shift=5; score=0.452356; -----gvCACGyGcc--- ; cor=; Ncor= a 0 0 0 0 0 3216.0 4837.0 53.0 18526.0 0.0 791.0 232.0 18.0 8007.0 4239.0 0 0 0 c 0 0 0 0 0 6013.0 6360.0 18526.0 0.0 18526.0 0.0 9081.0 0.0 18526.0 18526.0 0 0 0 g 0 0 0 0 0 12513.0 6203.0 0.0 4057.0 0.0 18526.0 0.0 18526.0 2072.0 3492.0 0 0 0 t 0 0 0 0 0 2742.0 1126.0 1.0 253.0 21.0 0.0 9446.0 464.0 5858.0 3321.0 0 0 0
MA1517.1_shift4 (KLF6)				; oligos_8nt_mkv6_m32 versus MA1517.1 (KLF6); m=8/22; ncol2=11; w=9; offset=3; strand=D; shift=4; score=0.452005; ----srcCACRCCCm--- ; cor=; Ncor= a 0 0 0 0 443.0 1035.0 569.0 432.0 2192.0 0.0 1024.0 0.0 25.0 71.0 955.0 0 0 0 c 0 0 0 0 624.0 490.0 2192.0 2192.0 284.0 2192.0 0.0 2192.0 2192.0 2192.0 665.0 0 0 0 g 0 0 0 0 626.0 1157.0 332.0 298.0 60.0 0.0 2192.0 0.0 60.0 12.0 52.0 0 0 0 t 0 0 0 0 499.0 136.0 219.0 140.0 60.0 24.0 0.0 0.0 0.0 64.0 520.0 0 0 0
MA0746.2_shift4 (SP3)				; oligos_8nt_mkv6_m32 versus MA0746.2 (SP3); m=9/22; ncol2=13; w=9; offset=3; strand=D; shift=4; score=0.439972; ----srCCACGCCCmCy- ; cor=; Ncor= a 0 0 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0 0 c 0 0 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0 0 g 0 0 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0 0 t 0 0 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0 0
MA0006.1_rc_shift7 (Ahr::Arnt_rc)				; oligos_8nt_mkv6_m32 versus MA0006.1_rc (Ahr::Arnt_rc); m=10/22; ncol2=6; w=6; offset=6; strand=R; shift=7; score=0.438455; -------CACGCr----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 24.0 1.0 1.0 1.0 11.0 0 0 0 0 0 c 0 0 0 0 0 0 0 24.0 0.0 23.0 0.0 23.0 2.0 0 0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 23.0 0.0 8.0 0 0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 3.0 0 0 0 0 0
MA1474.1_shift4 (CREB3L4)				; oligos_8nt_mkv6_m32 versus MA1474.1 (CREB3L4); m=11/22; ncol2=12; w=9; offset=3; strand=D; shift=4; score=0.438339; ----ygCCACGTCAyc-- ; cor=; Ncor= a 0 0 0 0 876.0 828.0 1118.0 260.0 3891.0 13.0 306.0 53.0 500.0 3891.0 284.0 664.0 0 0 c 0 0 0 0 1802.0 247.0 3891.0 3891.0 50.0 3891.0 65.0 301.0 3891.0 515.0 2584.0 1740.0 0 0 g 0 0 0 0 959.0 3891.0 165.0 112.0 208.0 20.0 3891.0 63.0 690.0 769.0 729.0 788.0 0 0 t 0 0 0 0 2090.0 1403.0 246.0 221.0 8.0 130.0 0.0 3891.0 279.0 275.0 1308.0 698.0 0 0
MA0104.4_shift4 (MYCN)				; oligos_8nt_mkv6_m32 versus MA0104.4 (MYCN); m=12/22; ncol2=12; w=9; offset=3; strand=D; shift=4; score=0.428972; ----sgCCACGTGGcs-- ; cor=; Ncor= a 0 0 0 0 1488.0 1734.0 480.0 34.0 6369.0 22.0 323.0 274.0 7.0 420.0 1101.0 1148.0 0 0 c 0 0 0 0 1894.0 1550.0 5341.0 6929.0 56.0 6517.0 122.0 285.0 14.0 743.0 2599.0 2454.0 0 0 g 0 0 0 0 2454.0 2599.0 743.0 14.0 285.0 122.0 6517.0 56.0 6929.0 5341.0 1550.0 1894.0 0 0 t 0 0 0 0 1148.0 1101.0 420.0 7.0 274.0 323.0 22.0 6369.0 34.0 480.0 1734.0 1488.0 0 0
MA0147.3_shift4 (MYC)				; oligos_8nt_mkv6_m32 versus MA0147.3 (MYC); m=13/22; ncol2=12; w=9; offset=3; strand=D; shift=4; score=0.422091; ----ssCCACGTGcys-- ; cor=; Ncor= a 0 0 0 0 1038.0 1019.0 438.0 44.0 4600.0 54.0 169.0 59.0 23.0 419.0 961.0 755.0 0 0 c 0 0 0 0 1345.0 1287.0 3746.0 4840.0 59.0 4525.0 157.0 162.0 56.0 2801.0 1524.0 1785.0 0 0 g 0 0 0 0 1649.0 1757.0 472.0 31.0 170.0 70.0 4578.0 63.0 4817.0 1198.0 1036.0 1348.0 0 0 t 0 0 0 0 910.0 879.0 286.0 27.0 113.0 293.0 38.0 4658.0 46.0 524.0 1421.0 1054.0 0 0
MA1512.1_shift5 (KLF11)				; oligos_8nt_mkv6_m32 versus MA1512.1 (KLF11); m=14/22; ncol2=11; w=8; offset=4; strand=D; shift=5; score=0.41597; -----gcCACGCCCmC-- ; cor=; Ncor= a 0 0 0 0 0 1882.0 2022.0 650.0 8655.0 0.0 2426.0 11.0 1.0 0.0 4689.0 581.0 0 0 c 0 0 0 0 0 2054.0 5549.0 8662.0 1289.0 9142.0 52.0 9161.0 9166.0 8941.0 4226.0 8403.0 0 0 g 0 0 0 0 0 3930.0 401.0 156.0 115.0 0.0 8291.0 18.0 20.0 4.0 69.0 358.0 0 0 t 0 0 0 0 0 1299.0 1192.0 506.0 27.0 38.0 349.0 23.0 7.0 885.0 761.0 1281.0 0 0
MA0742.1_shift4 (Klf12)				; oligos_8nt_mkv6_m32 versus MA0742.1 (Klf12); m=15/22; ncol2=15; w=9; offset=3; strand=D; shift=4; score=0.41507; ----GrCCACGCCCwtht ; cor=; Ncor= a 0 0 0 0 167.0 553.0 19.0 5.0 853.0 9.0 215.0 0.0 0.0 0.0 410.0 238.0 308.0 238.0 c 0 0 0 0 35.0 11.0 668.0 670.0 27.0 675.0 1.0 687.0 706.0 715.0 120.0 219.0 239.0 186.0 g 0 0 0 0 1158.0 531.0 8.0 12.0 2.0 0.0 1348.0 0.0 9.0 0.0 0.0 99.0 84.0 117.0 t 0 0 0 0 225.0 0.0 9.0 3.0 0.0 4.0 16.0 4.0 13.0 13.0 483.0 403.0 290.0 429.0
MA0259.1_rc_shift6 (ARNT::HIF1A_rc)				; oligos_8nt_mkv6_m32 versus MA0259.1_rc (ARNT::HIF1A_rc); m=16/22; ncol2=8; w=7; offset=5; strand=R; shift=6; score=0.414992; ------gCACGTvb---- ; cor=; Ncor= a 0 0 0 0 0 0 15.0 0.0 104.0 0.0 1.0 1.0 31.0 0.0 0 0 0 0 c 0 0 0 0 0 0 20.0 104.0 0.0 104.0 0.0 23.0 34.0 49.0 0 0 0 0 g 0 0 0 0 0 0 51.0 0.0 0.0 0.0 103.0 2.0 29.0 28.0 0 0 0 0 t 0 0 0 0 0 0 18.0 0.0 0.0 0.0 0.0 78.0 10.0 27.0 0 0 0 0
MA0740.1_shift4 (KLF14)				; oligos_8nt_mkv6_m32 versus MA0740.1 (KLF14); m=17/22; ncol2=14; w=9; offset=3; strand=D; shift=4; score=0.41366; ----krcCACGCCCmYyt ; cor=; Ncor= a 0 0 0 0 430.0 1205.0 526.0 0.0 1708.0 2.0 69.0 0.0 0.0 0.0 716.0 32.0 280.0 649.0 c 0 0 0 0 215.0 73.0 1360.0 1599.0 136.0 1596.0 36.0 1602.0 1604.0 1609.0 961.0 1463.0 594.0 741.0 g 0 0 0 0 966.0 2280.0 96.0 10.0 58.0 0.0 2939.0 3.0 3.0 4.0 1.0 15.0 89.0 314.0 t 0 0 0 0 693.0 71.0 404.0 248.0 5.0 2.0 31.0 0.0 6.0 65.0 31.0 559.0 1041.0 1670.0
MA0649.1_shift5 (HEY2)				; oligos_8nt_mkv6_m32 versus MA0649.1 (HEY2); m=18/22; ncol2=10; w=8; offset=4; strand=D; shift=5; score=0.411521; -----GrCACGTGyc--- ; cor=; Ncor= a 0 0 0 0 0 107.0 651.0 84.0 1800.0 7.0 27.0 36.0 0.0 50.0 285.0 0 0 0 c 0 0 0 0 0 99.0 305.0 1800.0 0.0 1800.0 72.0 120.0 34.0 1047.0 869.0 0 0 0 g 0 0 0 0 0 1800.0 620.0 83.0 128.0 0.0 1800.0 0.0 1800.0 128.0 382.0 0 0 0 t 0 0 0 0 0 101.0 224.0 58.0 0.0 0.0 0.0 1800.0 30.0 753.0 264.0 0 0 0
MA0741.1_shift5 (KLF16)				; oligos_8nt_mkv6_m32 versus MA0741.1 (KLF16); m=19/22; ncol2=11; w=8; offset=4; strand=D; shift=5; score=0.408431; -----gmCMCgCCCMC-- ; cor=; Ncor= a 0 0 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 c 0 0 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 g 0 0 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 t 0 0 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0
MA0616.2_rc_shift5 (HES2_rc)				; oligos_8nt_mkv6_m32 versus MA0616.2_rc (HES2_rc); m=20/22; ncol2=10; w=8; offset=4; strand=R; shift=5; score=0.404165; -----grCACGTGcC--- ; cor=; Ncor= a 0 0 0 0 0 1319.0 3849.0 0.0 8483.0 0.0 129.0 0.0 73.0 1581.0 798.0 0 0 0 c 0 0 0 0 0 1735.0 1289.0 8483.0 0.0 8483.0 0.0 2028.0 85.0 8483.0 8483.0 0 0 0 g 0 0 0 0 0 4464.0 4634.0 15.0 1098.0 0.0 8483.0 0.0 8483.0 1107.0 1193.0 0 0 0 t 0 0 0 0 0 966.0 512.0 53.0 0.0 0.0 0.0 6455.0 118.0 1501.0 775.0 0 0 0
MA0823.1_shift5 (HEY1)				; oligos_8nt_mkv6_m32 versus MA0823.1 (HEY1); m=21/22; ncol2=10; w=8; offset=4; strand=D; shift=5; score=0.402421; -----grCACGTGyc--- ; cor=; Ncor= a 0 0 0 0 0 437.0 1373.0 1.0 3338.0 0.0 0.0 0.0 32.0 333.0 475.0 0 0 0 c 0 0 0 0 0 761.0 656.0 3338.0 30.0 3338.0 18.0 474.0 19.0 1762.0 2172.0 0 0 0 g 0 0 0 0 0 1788.0 1199.0 3.0 123.0 0.0 3338.0 10.0 3338.0 380.0 373.0 0 0 0 t 0 0 0 0 0 352.0 110.0 15.0 21.0 0.0 0.0 3338.0 22.0 863.0 318.0 0 0 0
MA0004.1_rc_shift7 (Arnt_rc)				; oligos_8nt_mkv6_m32 versus MA0004.1_rc (Arnt_rc); m=22/22; ncol2=6; w=6; offset=6; strand=R; shift=7; score=0.400969; -------CACGTG----- ; cor=; Ncor= a 0 0 0 0 0 0 0 0.0 20.0 0.0 0.0 0.0 0.0 0 0 0 0 0 c 0 0 0 0 0 0 0 20.0 0.0 20.0 0.0 1.0 0.0 0 0 0 0 0 g 0 0 0 0 0 0 0 0.0 0.0 0.0 20.0 0.0 16.0 0 0 0 0 0 t 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 19.0 4.0 0 0 0 0 0