One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_8nt_mkv6_m41/peak-motifs_oligos_8nt_mkv6_m41.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_8nt_mkv6_m41/peak-motifs_oligos_8nt_mkv6_m41_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv6_m41_shift4 ; 28 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_8nt_mkv6_m41_shift4 (oligos_8nt_mkv6_m41oligos_8nt_mkv6_m41)
; oligos_8nt_mkv6_m41 (oligos_8nt_mkv6_m41oligos_8nt_mkv6_m41); m=0 (reference); ncol1=12; shift=4; ncol=20; ----gvTGACATCAbc---- ; Alignment reference a 0 0 0 0 530 753 45 46 2466 129 1918 46 70 2438 374 595 0 0 0 0 c 0 0 0 0 587 672 46 101 40 2326 106 54 2404 76 867 919 0 0 0 0 g 0 0 0 0 947 926 79 2395 41 118 566 20 109 54 710 607 0 0 0 0 t 0 0 0 0 583 296 2477 105 100 74 57 2527 64 79 696 526 0 0 0 0

MA0018.4_rc_shift4 (CREB1_rc)
; oligos_8nt_mkv6_m41 versus MA0018.4_rc (CREB1_rc); m=1/27; ncol2=13; w=12; offset=0; strand=R; shift=4; score=0.912565; ----drTGACATCAyhw--- ; cor=; Ncor= a 0 0 0 0 21630.0 32873.0 1485.0 1852.0 68217.0 1831.0 56875.0 2279.0 2963.0 75554.0 10149.0 22306.0 24750.0 0 0 0 c 0 0 0 0 13550.0 14802.0 1222.0 2177.0 1207.0 74401.0 6339.0 2012.0 72555.0 1109.0 27796.0 21104.0 15570.0 0 0 0 g 0 0 0 0 21876.0 21582.0 1018.0 71982.0 1231.0 1895.0 14144.0 1748.0 2298.0 970.0 13032.0 15046.0 17829.0 0 0 0 t 0 0 0 0 22488.0 10287.0 75819.0 3533.0 8889.0 1417.0 2186.0 73505.0 1728.0 1911.0 28567.0 21088.0 21395.0 0 0 0

MA0605.2_shift4 (ATF3)
; oligos_8nt_mkv6_m41 versus MA0605.2 (ATF3); m=2/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.875136; ----grTGACGTCAyc---- ; cor=; Ncor= a 0 0 0 0 8505.0 24741.0 0.0 0.0 40546.0 0.0 891.0 0.0 1520.0 40546.0 0.0 6919.0 0 0 0 0 c 0 0 0 0 8220.0 1354.0 0.0 0.0 0.0 40546.0 0.0 0.0 40546.0 0.0 15737.0 16820.0 0 0 0 0 g 0 0 0 0 16894.0 15805.0 1.0 40546.0 0.0 0.0 40546.0 0.0 0.0 0.0 1094.0 8242.0 0 0 0 0 t 0 0 0 0 6926.0 0.0 40546.0 1366.0 0.0 556.0 0.0 40546.0 0.0 0.0 24808.0 8564.0 0 0 0 0

MA1475.1_shift4 (CREB3L4(var.2))
; oligos_8nt_mkv6_m41 versus MA1475.1 (CREB3L4(var.2)); m=3/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.864147; ----grTGACGTCAyc---- ; cor=; Ncor= a 0 0 0 0 229.0 504.0 0.0 35.0 1293.0 0.0 81.0 16.0 176.0 1293.0 116.0 234.0 0 0 0 0 c 0 0 0 0 224.0 221.0 138.0 265.0 27.0 1293.0 3.0 100.0 1293.0 35.0 748.0 582.0 0 0 0 0 g 0 0 0 0 570.0 790.0 48.0 1293.0 83.0 6.0 1293.0 36.0 227.0 153.0 282.0 265.0 0 0 0 0 t 0 0 0 0 270.0 75.0 1293.0 258.0 39.0 43.0 0.0 1293.0 59.0 40.0 546.0 212.0 0 0 0 0

MA1139.1_rc_shift4 (FOSL2::JUNB(var.2)_rc)
; oligos_8nt_mkv6_m41 versus MA1139.1_rc (FOSL2::JUNB(var.2)_rc); m=4/27; ncol2=12; w=12; offset=0; strand=R; shift=4; score=0.861001; ----krTGACGTCAym---- ; cor=; Ncor= a 0 0 0 0 228.0 639.0 8.0 13.0 972.0 10.0 74.0 10.0 187.0 969.0 29.0 263.0 0 0 0 0 c 0 0 0 0 151.0 67.0 19.0 23.0 6.0 900.0 17.0 13.0 780.0 6.0 268.0 359.0 0 0 0 0 g 0 0 0 0 358.0 266.0 5.0 778.0 12.0 16.0 899.0 5.0 21.0 17.0 65.0 150.0 0 0 0 0 t 0 0 0 0 263.0 28.0 968.0 186.0 10.0 74.0 10.0 972.0 12.0 8.0 638.0 227.0 0 0 0 0

MA0656.1_shift4 (JDP2(var.2))
; oligos_8nt_mkv6_m41 versus MA0656.1 (JDP2(var.2)); m=5/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.849143; ----gATGACGTCAyc---- ; cor=; Ncor= a 0 0 0 0 4260.0 24403.0 3.0 11.0 24403.0 5.0 587.0 15.0 1777.0 24403.0 47.0 4383.0 0 0 0 0 c 0 0 0 0 5483.0 1319.0 9.0 0.0 7.0 24403.0 5.0 24.0 24403.0 10.0 12119.0 12117.0 0 0 0 0 g 0 0 0 0 11036.0 1403.0 3.0 24403.0 6.0 6.0 24403.0 7.0 4.0 9.0 835.0 4124.0 0 0 0 0 t 0 0 0 0 3623.0 17.0 24403.0 1939.0 6.0 338.0 2.0 24403.0 1.0 0.0 12283.0 3778.0 0 0 0 0

MA1133.1_rc_shift4 (JUN::JUNB(var.2)_rc)
; oligos_8nt_mkv6_m41 versus MA1133.1_rc (JUN::JUNB(var.2)_rc); m=6/27; ncol2=12; w=12; offset=0; strand=R; shift=4; score=0.841581; ----vATGACGTCAym---- ; cor=; Ncor= a 0 0 0 0 278.0 712.0 26.0 40.0 903.0 42.0 68.0 129.0 218.0 875.0 30.0 457.0 0 0 0 0 c 0 0 0 0 255.0 130.0 35.0 35.0 40.0 867.0 47.0 63.0 703.0 25.0 486.0 358.0 0 0 0 0 g 0 0 0 0 254.0 125.0 19.0 834.0 27.0 36.0 862.0 22.0 28.0 43.0 108.0 132.0 0 0 0 0 t 0 0 0 0 212.0 33.0 919.0 91.0 30.0 55.0 23.0 787.0 51.0 58.0 376.0 54.0 0 0 0 0

MA1632.1_rc_shift4 (ATF2_rc)
; oligos_8nt_mkv6_m41 versus MA1632.1_rc (ATF2_rc); m=7/27; ncol2=13; w=12; offset=0; strand=R; shift=4; score=0.839352; ----raTGACvTCATyw--- ; cor=; Ncor= a 0 0 0 0 18336.0 36321.0 509.0 909.0 57832.0 261.0 18166.0 975.0 2498.0 57651.0 1438.0 11021.0 16567.0 0 0 0 c 0 0 0 0 11553.0 5971.0 768.0 649.0 283.0 56882.0 23207.0 262.0 55318.0 328.0 6229.0 18924.0 11910.0 0 0 0 g 0 0 0 0 15785.0 14153.0 218.0 53464.0 316.0 886.0 16970.0 396.0 408.0 899.0 3145.0 10292.0 10795.0 0 0 0 t 0 0 0 0 13720.0 2949.0 57899.0 4372.0 963.0 1365.0 1051.0 57761.0 1170.0 516.0 48582.0 19157.0 20122.0 0 0 0

MA1140.2_rc_shift4 (JUNB(var.2)_rc)
; oligos_8nt_mkv6_m41 versus MA1140.2_rc (JUNB(var.2)_rc); m=8/27; ncol2=12; w=12; offset=0; strand=R; shift=4; score=0.835987; ----grTGACGTCATc---- ; cor=; Ncor= a 0 0 0 0 35.0 191.0 1.0 1.0 305.0 0.0 2.0 0.0 13.0 305.0 6.0 47.0 0 0 0 0 c 0 0 0 0 43.0 10.0 1.0 3.0 1.0 305.0 0.0 1.0 305.0 4.0 15.0 162.0 0 0 0 0 g 0 0 0 0 187.0 114.0 2.0 305.0 3.0 1.0 305.0 1.0 0.0 1.0 7.0 46.0 0 0 0 0 t 0 0 0 0 40.0 0.0 305.0 17.0 1.0 0.0 0.0 305.0 0.0 1.0 305.0 50.0 0 0 0 0

MA0840.1_shift4 (Creb5)
; oligos_8nt_mkv6_m41 versus MA0840.1 (Creb5); m=9/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.834501; ----rATGACGTCAyy---- ; cor=; Ncor= a 0 0 0 0 1202.0 3704.0 6.0 13.0 3704.0 0.0 151.0 18.0 917.0 3704.0 25.0 740.0 0 0 0 0 c 0 0 0 0 740.0 227.0 16.0 6.0 0.0 3704.0 0.0 6.0 3704.0 0.0 1861.0 1466.0 0 0 0 0 g 0 0 0 0 1066.0 256.0 0.0 3704.0 1.0 0.0 3704.0 0.0 0.0 0.0 77.0 372.0 0 0 0 0 t 0 0 0 0 695.0 40.0 3704.0 918.0 10.0 57.0 0.0 3704.0 4.0 2.0 1843.0 1126.0 0 0 0 0

MA1131.1_shift4 (FOSL2::JUN(var.2))
; oligos_8nt_mkv6_m41 versus MA1131.1 (FOSL2::JUN(var.2)); m=10/27; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.789448; ----grTGACGTmAt----- ; cor=; Ncor= a 0 0 0 0 222.0 633.0 6.0 7.0 963.0 11.0 92.0 14.0 351.0 961.0 38.0 0 0 0 0 0 c 0 0 0 0 94.0 30.0 8.0 14.0 6.0 906.0 45.0 70.0 625.0 10.0 218.0 0 0 0 0 0 g 0 0 0 0 459.0 323.0 8.0 917.0 9.0 22.0 845.0 9.0 16.0 13.0 166.0 0 0 0 0 0 t 0 0 0 0 224.0 15.0 978.0 62.0 23.0 61.0 17.0 908.0 8.0 15.0 578.0 0 0 0 0 0

MA1127.1_shift4 (FOSB::JUN)
; oligos_8nt_mkv6_m41 versus MA1127.1 (FOSB::JUN); m=11/27; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.782752; ----gaTGACGTCAy----- ; cor=; Ncor= a 0 0 0 0 193.0 649.0 12.0 17.0 954.0 48.0 75.0 25.0 247.0 949.0 92.0 0 0 0 0 0 c 0 0 0 0 70.0 87.0 10.0 10.0 8.0 886.0 14.0 57.0 697.0 16.0 261.0 0 0 0 0 0 g 0 0 0 0 575.0 216.0 12.0 872.0 17.0 25.0 897.0 14.0 20.0 14.0 53.0 0 0 0 0 0 t 0 0 0 0 162.0 48.0 965.0 100.0 20.0 42.0 14.0 904.0 36.0 21.0 593.0 0 0 0 0 0

MA0834.1_rc_shift3 (ATF7_rc)
; oligos_8nt_mkv6_m41 versus MA0834.1_rc (ATF7_rc); m=12/27; ncol2=14; w=12; offset=-1; strand=R; shift=3; score=0.719395; ---bkRTGACGTCATyg--- ; cor=; Ncor= a 0 0 0 2839.0 3456.0 19329.0 11.0 22.0 19329.0 4.0 68.0 12.0 1759.0 19329.0 41.0 4461.0 4641.0 0 0 0 c 0 0 0 5892.0 2129.0 440.0 49.0 51.0 77.0 19329.0 33.0 58.0 19329.0 43.0 3772.0 7299.0 4161.0 0 0 0 g 0 0 0 4920.0 8116.0 7305.0 2.0 19329.0 16.0 9.0 19329.0 8.0 7.0 4.0 368.0 2440.0 6606.0 0 0 0 t 0 0 0 5680.0 5628.0 82.0 19329.0 2698.0 25.0 79.0 20.0 19329.0 26.0 11.0 19329.0 5130.0 3922.0 0 0 0

MA0492.1_rc_shift4 (JUND(var.2)_rc)
; oligos_8nt_mkv6_m41 versus MA0492.1_rc (JUND(var.2)_rc); m=13/27; ncol2=15; w=12; offset=0; strand=R; shift=4; score=0.717721; ----kATKACrTCATywyw- ; cor=; Ncor= a 0 0 0 0 6184.0 25487.0 0.0 0.0 29696.0 0.0 14938.0 0.0 120.0 33631.0 0.0 1802.0 9424.0 8246.0 9861.0 0 c 0 0 0 0 6351.0 2407.0 0.0 141.0 0.0 26683.0 8287.0 0.0 33511.0 0.0 8115.0 15761.0 8110.0 8721.0 7996.0 0 g 0 0 0 0 10841.0 5470.0 0.0 24697.0 3935.0 1824.0 10406.0 0.0 0.0 0.0 169.0 2452.0 4836.0 3228.0 4326.0 0 t 0 0 0 0 10255.0 267.0 33631.0 8793.0 0.0 5124.0 0.0 33631.0 0.0 0.0 25347.0 13616.0 11261.0 13436.0 11448.0 0

MA1136.1_rc_shift5 (FOSB::JUNB(var.2)_rc)
; oligos_8nt_mkv6_m41 versus MA1136.1_rc (FOSB::JUNB(var.2)_rc); m=14/27; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.713281; -----rTGACGTCAy----- ; cor=; Ncor= a 0 0 0 0 0 664.0 31.0 15.0 836.0 20.0 101.0 28.0 242.0 917.0 12.0 0 0 0 0 0 c 0 0 0 0 0 65.0 30.0 36.0 28.0 893.0 27.0 60.0 700.0 16.0 368.0 0 0 0 0 0 g 0 0 0 0 0 260.0 16.0 776.0 80.0 35.0 842.0 44.0 46.0 36.0 59.0 0 0 0 0 0 t 0 0 0 0 0 11.0 923.0 173.0 56.0 52.0 30.0 869.0 13.0 30.0 561.0 0 0 0 0 0

MA0488.1_rc_shift5 (JUN_rc)
; oligos_8nt_mkv6_m41 versus MA0488.1_rc (JUN_rc); m=15/27; ncol2=13; w=11; offset=1; strand=R; shift=5; score=0.70959; -----ATkACaTCATywt-- ; cor=; Ncor= a 0 0 0 0 0 16045.0 0.0 0.0 16499.0 0.0 13018.0 1.0 119.0 20968.0 0.0 2887.0 5929.0 5141.0 0 0 c 0 0 0 0 0 1016.0 0.0 0.0 0.0 20360.0 4512.0 0.0 20849.0 0.0 3713.0 9682.0 4985.0 4894.0 0 0 g 0 0 0 0 0 3704.0 0.0 14064.0 3531.0 608.0 3438.0 0.0 0.0 0.0 729.0 1903.0 2938.0 2792.0 0 0 t 0 0 0 0 0 203.0 20968.0 6904.0 938.0 0.0 0.0 20967.0 0.0 0.0 16526.0 6496.0 7116.0 8141.0 0 0

MA1145.1_shift3 (FOSL2::JUND(var.2))
; oligos_8nt_mkv6_m41 versus MA1145.1 (FOSL2::JUND(var.2)); m=16/27; ncol2=15; w=12; offset=-1; strand=D; shift=3; score=0.705857; ---kkrTkACGTCAycgc-- ; cor=; Ncor= a 0 0 0 198.0 219.0 559.0 26.0 7.0 943.0 12.0 135.0 28.0 33.0 972.0 23.0 217.0 162.0 248.0 0 0 c 0 0 0 177.0 189.0 45.0 27.0 46.0 6.0 911.0 15.0 12.0 942.0 6.0 345.0 434.0 222.0 288.0 0 0 g 0 0 0 286.0 340.0 340.0 10.0 678.0 31.0 35.0 823.0 10.0 15.0 11.0 55.0 104.0 416.0 241.0 0 0 t 0 0 0 339.0 252.0 57.0 937.0 268.0 20.0 41.0 28.0 950.0 11.0 11.0 577.0 245.0 200.0 223.0 0 0

MA1129.1_rc_shift5 (FOSL1::JUN(var.2)_rc)
; oligos_8nt_mkv6_m41 versus MA1129.1_rc (FOSL1::JUN(var.2)_rc); m=17/27; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.69711; -----rTgACGTcAy----- ; cor=; Ncor= a 0 0 0 0 0 641.0 30.0 35.0 827.0 24.0 95.0 43.0 240.0 919.0 26.0 0 0 0 0 0 c 0 0 0 0 0 71.0 31.0 58.0 27.0 847.0 38.0 106.0 672.0 24.0 266.0 0 0 0 0 0 g 0 0 0 0 0 264.0 22.0 670.0 105.0 36.0 845.0 26.0 56.0 30.0 69.0 0 0 0 0 0 t 0 0 0 0 0 24.0 917.0 238.0 41.0 93.0 22.0 825.0 33.0 28.0 639.0 0 0 0 0 0

MA0609.2_shift2 (CREM)
; oligos_8nt_mkv6_m41 versus MA0609.2 (CREM); m=18/27; ncol2=16; w=12; offset=-2; strand=D; shift=2; score=0.659544; --gcrgTGACGTCAcygc-- ; cor=; Ncor= a 0 0 3865.0 3966.0 5881.0 2936.0 559.0 434.0 15694.0 517.0 1582.0 400.0 672.0 15228.0 789.0 3757.0 3582.0 3801.0 0 0 c 0 0 4230.0 5521.0 2908.0 2159.0 730.0 1038.0 313.0 14031.0 901.0 622.0 14883.0 508.0 11146.0 4473.0 3957.0 5132.0 0 0 g 0 0 5132.0 3956.0 4474.0 11144.0 506.0 14883.0 619.0 897.0 14026.0 314.0 1039.0 730.0 2156.0 2910.0 5523.0 4230.0 0 0 t 0 0 3800.0 3584.0 3764.0 788.0 15232.0 672.0 401.0 1582.0 518.0 15691.0 433.0 561.0 2936.0 5887.0 3965.0 3864.0 0 0

MA1143.1_shift5 (FOSL1::JUND(var.2))
; oligos_8nt_mkv6_m41 versus MA1143.1 (FOSL1::JUND(var.2)); m=19/27; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.657972; -----rTGACgymay----- ; cor=; Ncor= a 0 0 0 0 0 561.0 36.0 39.0 870.0 32.0 116.0 117.0 546.0 645.0 123.0 0 0 0 0 0 c 0 0 0 0 0 75.0 50.0 101.0 45.0 835.0 59.0 262.0 330.0 66.0 401.0 0 0 0 0 0 g 0 0 0 0 0 324.0 44.0 777.0 41.0 64.0 649.0 39.0 83.0 100.0 82.0 0 0 0 0 0 t 0 0 0 0 0 40.0 870.0 82.0 44.0 68.0 176.0 582.0 41.0 188.0 394.0 0 0 0 0 0

MA1126.1_shift4 (FOS::JUN(var.2))
; oligos_8nt_mkv6_m41 versus MA1126.1 (FOS::JUN(var.2)); m=20/27; ncol2=16; w=12; offset=0; strand=D; shift=4; score=0.646698; ----drTgACGTCAtmmkty ; cor=; Ncor= a 0 0 0 0 266.0 556.0 47.0 42.0 748.0 80.0 131.0 40.0 53.0 907.0 30.0 299.0 322.0 190.0 161.0 203.0 c 0 0 0 0 63.0 45.0 74.0 112.0 31.0 838.0 114.0 23.0 846.0 24.0 234.0 322.0 313.0 178.0 75.0 291.0 g 0 0 0 0 419.0 369.0 62.0 655.0 135.0 41.0 722.0 32.0 44.0 36.0 60.0 160.0 161.0 261.0 238.0 207.0 t 0 0 0 0 252.0 30.0 816.0 191.0 86.0 41.0 34.0 905.0 57.0 33.0 676.0 220.0 204.0 371.0 526.0 298.0

MA0775.1_shift5 (MEIS3)
; oligos_8nt_mkv6_m41 versus MA0775.1 (MEIS3); m=21/27; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.509456; -----wTGACAgs------- ; cor=; Ncor= a 0 0 0 0 0 1866.0 465.0 0.0 7165.0 53.0 7165.0 1690.0 960.0 0 0 0 0 0 0 0 c 0 0 0 0 0 60.0 383.0 6.0 20.0 7165.0 8.0 1889.0 2342.0 0 0 0 0 0 0 0 g 0 0 0 0 0 1788.0 260.0 7165.0 455.0 8.0 468.0 7165.0 2888.0 0 0 0 0 0 0 0 t 0 0 0 0 0 3451.0 7165.0 0.0 53.0 160.0 145.0 2094.0 975.0 0 0 0 0 0 0 0

MA0498.2_shift5 (MEIS1)
; oligos_8nt_mkv6_m41 versus MA0498.2 (MEIS1); m=22/27; ncol2=7; w=7; offset=1; strand=D; shift=5; score=0.49606; -----wTGACAg-------- ; cor=; Ncor= a 0 0 0 0 0 23727.0 8690.0 0.0 77159.0 0.0 77159.0 17224.0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 18797.0 5575.0 1249.0 2903.0 77159.0 0.0 14864.0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 9714.0 3174.0 77159.0 672.0 0.0 9263.0 29965.0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 24921.0 77159.0 0.0 0.0 1155.0 3861.0 15106.0 0 0 0 0 0 0 0 0

MA0774.1_shift5 (MEIS2)
; oligos_8nt_mkv6_m41 versus MA0774.1 (MEIS2); m=23/27; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.47608; -----tTGACAGs------- ; cor=; Ncor= a 0 0 0 0 0 408.0 31.0 0.0 1351.0 9.0 1351.0 83.0 157.0 0 0 0 0 0 0 0 c 0 0 0 0 0 264.0 3.0 0.0 3.0 1351.0 7.0 98.0 701.0 0 0 0 0 0 0 0 g 0 0 0 0 0 314.0 40.0 1351.0 25.0 0.0 4.0 1351.0 650.0 0 0 0 0 0 0 0 t 0 0 0 0 0 1351.0 1351.0 0.0 62.0 5.0 0.0 67.0 88.0 0 0 0 0 0 0 0

MA0604.1_shift5 (Atf1)
; oligos_8nt_mkv6_m41 versus MA0604.1 (Atf1); m=24/27; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.473253; -----rTGACGTa------- ; cor=; Ncor= a 0 0 0 0 0 462.0 24.0 0.0 1000.0 0.0 7.0 90.0 600.0 0 0 0 0 0 0 0 c 0 0 0 0 0 86.0 16.0 22.0 0.0 1000.0 0.0 198.0 138.0 0 0 0 0 0 0 0 g 0 0 0 0 0 387.0 0.0 803.0 0.0 0.0 993.0 0.0 163.0 0 0 0 0 0 0 0 t 0 0 0 0 0 65.0 960.0 175.0 0.0 0.0 0.0 712.0 100.0 0 0 0 0 0 0 0

MA1470.1_rc_shift0 (BACH2(var.2)_rc)
; oligos_8nt_mkv6_m41 versus MA1470.1_rc (BACH2(var.2)_rc); m=25/27; ncol2=20; w=12; offset=-4; strand=R; shift=0; score=0.458641; aWAksATSACGTCATsvTwt ; cor=; Ncor= a 166.0 224.0 236.0 54.0 31.0 259.0 0.0 0.0 323.0 0.0 0.0 0.0 0.0 317.0 3.0 0.0 93.0 46.0 90.0 61.0 c 46.0 3.0 1.0 68.0 189.0 0.0 0.0 116.0 0.0 327.0 0.0 1.0 326.0 0.0 0.0 114.0 93.0 27.0 26.0 50.0 g 33.0 9.0 25.0 94.0 100.0 63.0 15.0 320.0 0.0 0.0 324.0 0.0 0.0 0.0 0.0 196.0 85.0 11.0 11.0 32.0 t 76.0 79.0 65.0 106.0 2.0 0.0 322.0 0.0 0.0 0.0 0.0 323.0 96.0 4.0 324.0 15.0 50.0 250.0 202.0 178.0

MA0067.1_rc_shift3 (Pax2_rc)
; oligos_8nt_mkv6_m41 versus MA0067.1_rc (Pax2_rc); m=26/27; ncol2=8; w=7; offset=-1; strand=R; shift=3; score=0.450597; ---vmrTGAcw--------- ; cor=; Ncor= a 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 0 0 0 0 0 0 0 c 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 0 0 0 0 0 0 0 g 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 0 0 0 0 0 0 0 t 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0 0 0 0 0 0 0 0

MA1576.1_shift5 (THRB(var.3))
; oligos_8nt_mkv6_m41 versus MA1576.1 (THRB(var.3)); m=27/27; ncol2=19; w=11; offset=1; strand=D; shift=5; score=0.40485; -----rTGACCTyacrTGAC ; cor=; Ncor= a 0 0 0 0 0 119.0 0.0 28.0 389.0 0.0 0.0 13.0 11.0 263.0 42.0 102.0 0.0 0.0 389.0 0.0 c 0 0 0 0 0 31.0 8.0 89.0 19.0 389.0 389.0 75.0 134.0 28.0 221.0 86.0 0.0 0.0 11.0 389.0 g 0 0 0 0 0 157.0 0.0 389.0 17.0 4.0 59.0 38.0 93.0 89.0 71.0 205.0 6.0 389.0 0.0 0.0 t 0 0 0 0 0 82.0 381.0 45.0 71.0 17.0 20.0 389.0 151.0 9.0 54.0 0.0 393.0 3.0 86.0 2.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_8nt_mkv6_m41_shift4 (oligos_8nt_mkv6_m41oligos_8nt_mkv6_m41)				; oligos_8nt_mkv6_m41 (oligos_8nt_mkv6_m41oligos_8nt_mkv6_m41); m=0 (reference); ncol1=12; shift=4; ncol=20; ----gvTGACATCAbc---- ; Alignment reference a 0 0 0 0 530 753 45 46 2466 129 1918 46 70 2438 374 595 0 0 0 0 c 0 0 0 0 587 672 46 101 40 2326 106 54 2404 76 867 919 0 0 0 0 g 0 0 0 0 947 926 79 2395 41 118 566 20 109 54 710 607 0 0 0 0 t 0 0 0 0 583 296 2477 105 100 74 57 2527 64 79 696 526 0 0 0 0
MA0018.4_rc_shift4 (CREB1_rc)				; oligos_8nt_mkv6_m41 versus MA0018.4_rc (CREB1_rc); m=1/27; ncol2=13; w=12; offset=0; strand=R; shift=4; score=0.912565; ----drTGACATCAyhw--- ; cor=; Ncor= a 0 0 0 0 21630.0 32873.0 1485.0 1852.0 68217.0 1831.0 56875.0 2279.0 2963.0 75554.0 10149.0 22306.0 24750.0 0 0 0 c 0 0 0 0 13550.0 14802.0 1222.0 2177.0 1207.0 74401.0 6339.0 2012.0 72555.0 1109.0 27796.0 21104.0 15570.0 0 0 0 g 0 0 0 0 21876.0 21582.0 1018.0 71982.0 1231.0 1895.0 14144.0 1748.0 2298.0 970.0 13032.0 15046.0 17829.0 0 0 0 t 0 0 0 0 22488.0 10287.0 75819.0 3533.0 8889.0 1417.0 2186.0 73505.0 1728.0 1911.0 28567.0 21088.0 21395.0 0 0 0
MA0605.2_shift4 (ATF3)				; oligos_8nt_mkv6_m41 versus MA0605.2 (ATF3); m=2/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.875136; ----grTGACGTCAyc---- ; cor=; Ncor= a 0 0 0 0 8505.0 24741.0 0.0 0.0 40546.0 0.0 891.0 0.0 1520.0 40546.0 0.0 6919.0 0 0 0 0 c 0 0 0 0 8220.0 1354.0 0.0 0.0 0.0 40546.0 0.0 0.0 40546.0 0.0 15737.0 16820.0 0 0 0 0 g 0 0 0 0 16894.0 15805.0 1.0 40546.0 0.0 0.0 40546.0 0.0 0.0 0.0 1094.0 8242.0 0 0 0 0 t 0 0 0 0 6926.0 0.0 40546.0 1366.0 0.0 556.0 0.0 40546.0 0.0 0.0 24808.0 8564.0 0 0 0 0
MA1475.1_shift4 (CREB3L4(var.2))				; oligos_8nt_mkv6_m41 versus MA1475.1 (CREB3L4(var.2)); m=3/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.864147; ----grTGACGTCAyc---- ; cor=; Ncor= a 0 0 0 0 229.0 504.0 0.0 35.0 1293.0 0.0 81.0 16.0 176.0 1293.0 116.0 234.0 0 0 0 0 c 0 0 0 0 224.0 221.0 138.0 265.0 27.0 1293.0 3.0 100.0 1293.0 35.0 748.0 582.0 0 0 0 0 g 0 0 0 0 570.0 790.0 48.0 1293.0 83.0 6.0 1293.0 36.0 227.0 153.0 282.0 265.0 0 0 0 0 t 0 0 0 0 270.0 75.0 1293.0 258.0 39.0 43.0 0.0 1293.0 59.0 40.0 546.0 212.0 0 0 0 0
MA1139.1_rc_shift4 (FOSL2::JUNB(var.2)_rc)				; oligos_8nt_mkv6_m41 versus MA1139.1_rc (FOSL2::JUNB(var.2)_rc); m=4/27; ncol2=12; w=12; offset=0; strand=R; shift=4; score=0.861001; ----krTGACGTCAym---- ; cor=; Ncor= a 0 0 0 0 228.0 639.0 8.0 13.0 972.0 10.0 74.0 10.0 187.0 969.0 29.0 263.0 0 0 0 0 c 0 0 0 0 151.0 67.0 19.0 23.0 6.0 900.0 17.0 13.0 780.0 6.0 268.0 359.0 0 0 0 0 g 0 0 0 0 358.0 266.0 5.0 778.0 12.0 16.0 899.0 5.0 21.0 17.0 65.0 150.0 0 0 0 0 t 0 0 0 0 263.0 28.0 968.0 186.0 10.0 74.0 10.0 972.0 12.0 8.0 638.0 227.0 0 0 0 0
MA0656.1_shift4 (JDP2(var.2))				; oligos_8nt_mkv6_m41 versus MA0656.1 (JDP2(var.2)); m=5/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.849143; ----gATGACGTCAyc---- ; cor=; Ncor= a 0 0 0 0 4260.0 24403.0 3.0 11.0 24403.0 5.0 587.0 15.0 1777.0 24403.0 47.0 4383.0 0 0 0 0 c 0 0 0 0 5483.0 1319.0 9.0 0.0 7.0 24403.0 5.0 24.0 24403.0 10.0 12119.0 12117.0 0 0 0 0 g 0 0 0 0 11036.0 1403.0 3.0 24403.0 6.0 6.0 24403.0 7.0 4.0 9.0 835.0 4124.0 0 0 0 0 t 0 0 0 0 3623.0 17.0 24403.0 1939.0 6.0 338.0 2.0 24403.0 1.0 0.0 12283.0 3778.0 0 0 0 0
MA1133.1_rc_shift4 (JUN::JUNB(var.2)_rc)				; oligos_8nt_mkv6_m41 versus MA1133.1_rc (JUN::JUNB(var.2)_rc); m=6/27; ncol2=12; w=12; offset=0; strand=R; shift=4; score=0.841581; ----vATGACGTCAym---- ; cor=; Ncor= a 0 0 0 0 278.0 712.0 26.0 40.0 903.0 42.0 68.0 129.0 218.0 875.0 30.0 457.0 0 0 0 0 c 0 0 0 0 255.0 130.0 35.0 35.0 40.0 867.0 47.0 63.0 703.0 25.0 486.0 358.0 0 0 0 0 g 0 0 0 0 254.0 125.0 19.0 834.0 27.0 36.0 862.0 22.0 28.0 43.0 108.0 132.0 0 0 0 0 t 0 0 0 0 212.0 33.0 919.0 91.0 30.0 55.0 23.0 787.0 51.0 58.0 376.0 54.0 0 0 0 0
MA1632.1_rc_shift4 (ATF2_rc)				; oligos_8nt_mkv6_m41 versus MA1632.1_rc (ATF2_rc); m=7/27; ncol2=13; w=12; offset=0; strand=R; shift=4; score=0.839352; ----raTGACvTCATyw--- ; cor=; Ncor= a 0 0 0 0 18336.0 36321.0 509.0 909.0 57832.0 261.0 18166.0 975.0 2498.0 57651.0 1438.0 11021.0 16567.0 0 0 0 c 0 0 0 0 11553.0 5971.0 768.0 649.0 283.0 56882.0 23207.0 262.0 55318.0 328.0 6229.0 18924.0 11910.0 0 0 0 g 0 0 0 0 15785.0 14153.0 218.0 53464.0 316.0 886.0 16970.0 396.0 408.0 899.0 3145.0 10292.0 10795.0 0 0 0 t 0 0 0 0 13720.0 2949.0 57899.0 4372.0 963.0 1365.0 1051.0 57761.0 1170.0 516.0 48582.0 19157.0 20122.0 0 0 0
MA1140.2_rc_shift4 (JUNB(var.2)_rc)				; oligos_8nt_mkv6_m41 versus MA1140.2_rc (JUNB(var.2)_rc); m=8/27; ncol2=12; w=12; offset=0; strand=R; shift=4; score=0.835987; ----grTGACGTCATc---- ; cor=; Ncor= a 0 0 0 0 35.0 191.0 1.0 1.0 305.0 0.0 2.0 0.0 13.0 305.0 6.0 47.0 0 0 0 0 c 0 0 0 0 43.0 10.0 1.0 3.0 1.0 305.0 0.0 1.0 305.0 4.0 15.0 162.0 0 0 0 0 g 0 0 0 0 187.0 114.0 2.0 305.0 3.0 1.0 305.0 1.0 0.0 1.0 7.0 46.0 0 0 0 0 t 0 0 0 0 40.0 0.0 305.0 17.0 1.0 0.0 0.0 305.0 0.0 1.0 305.0 50.0 0 0 0 0
MA0840.1_shift4 (Creb5)				; oligos_8nt_mkv6_m41 versus MA0840.1 (Creb5); m=9/27; ncol2=12; w=12; offset=0; strand=D; shift=4; score=0.834501; ----rATGACGTCAyy---- ; cor=; Ncor= a 0 0 0 0 1202.0 3704.0 6.0 13.0 3704.0 0.0 151.0 18.0 917.0 3704.0 25.0 740.0 0 0 0 0 c 0 0 0 0 740.0 227.0 16.0 6.0 0.0 3704.0 0.0 6.0 3704.0 0.0 1861.0 1466.0 0 0 0 0 g 0 0 0 0 1066.0 256.0 0.0 3704.0 1.0 0.0 3704.0 0.0 0.0 0.0 77.0 372.0 0 0 0 0 t 0 0 0 0 695.0 40.0 3704.0 918.0 10.0 57.0 0.0 3704.0 4.0 2.0 1843.0 1126.0 0 0 0 0
MA1131.1_shift4 (FOSL2::JUN(var.2))				; oligos_8nt_mkv6_m41 versus MA1131.1 (FOSL2::JUN(var.2)); m=10/27; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.789448; ----grTGACGTmAt----- ; cor=; Ncor= a 0 0 0 0 222.0 633.0 6.0 7.0 963.0 11.0 92.0 14.0 351.0 961.0 38.0 0 0 0 0 0 c 0 0 0 0 94.0 30.0 8.0 14.0 6.0 906.0 45.0 70.0 625.0 10.0 218.0 0 0 0 0 0 g 0 0 0 0 459.0 323.0 8.0 917.0 9.0 22.0 845.0 9.0 16.0 13.0 166.0 0 0 0 0 0 t 0 0 0 0 224.0 15.0 978.0 62.0 23.0 61.0 17.0 908.0 8.0 15.0 578.0 0 0 0 0 0
MA1127.1_shift4 (FOSB::JUN)				; oligos_8nt_mkv6_m41 versus MA1127.1 (FOSB::JUN); m=11/27; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.782752; ----gaTGACGTCAy----- ; cor=; Ncor= a 0 0 0 0 193.0 649.0 12.0 17.0 954.0 48.0 75.0 25.0 247.0 949.0 92.0 0 0 0 0 0 c 0 0 0 0 70.0 87.0 10.0 10.0 8.0 886.0 14.0 57.0 697.0 16.0 261.0 0 0 0 0 0 g 0 0 0 0 575.0 216.0 12.0 872.0 17.0 25.0 897.0 14.0 20.0 14.0 53.0 0 0 0 0 0 t 0 0 0 0 162.0 48.0 965.0 100.0 20.0 42.0 14.0 904.0 36.0 21.0 593.0 0 0 0 0 0
MA0834.1_rc_shift3 (ATF7_rc)				; oligos_8nt_mkv6_m41 versus MA0834.1_rc (ATF7_rc); m=12/27; ncol2=14; w=12; offset=-1; strand=R; shift=3; score=0.719395; ---bkRTGACGTCATyg--- ; cor=; Ncor= a 0 0 0 2839.0 3456.0 19329.0 11.0 22.0 19329.0 4.0 68.0 12.0 1759.0 19329.0 41.0 4461.0 4641.0 0 0 0 c 0 0 0 5892.0 2129.0 440.0 49.0 51.0 77.0 19329.0 33.0 58.0 19329.0 43.0 3772.0 7299.0 4161.0 0 0 0 g 0 0 0 4920.0 8116.0 7305.0 2.0 19329.0 16.0 9.0 19329.0 8.0 7.0 4.0 368.0 2440.0 6606.0 0 0 0 t 0 0 0 5680.0 5628.0 82.0 19329.0 2698.0 25.0 79.0 20.0 19329.0 26.0 11.0 19329.0 5130.0 3922.0 0 0 0
MA0492.1_rc_shift4 (JUND(var.2)_rc)				; oligos_8nt_mkv6_m41 versus MA0492.1_rc (JUND(var.2)_rc); m=13/27; ncol2=15; w=12; offset=0; strand=R; shift=4; score=0.717721; ----kATKACrTCATywyw- ; cor=; Ncor= a 0 0 0 0 6184.0 25487.0 0.0 0.0 29696.0 0.0 14938.0 0.0 120.0 33631.0 0.0 1802.0 9424.0 8246.0 9861.0 0 c 0 0 0 0 6351.0 2407.0 0.0 141.0 0.0 26683.0 8287.0 0.0 33511.0 0.0 8115.0 15761.0 8110.0 8721.0 7996.0 0 g 0 0 0 0 10841.0 5470.0 0.0 24697.0 3935.0 1824.0 10406.0 0.0 0.0 0.0 169.0 2452.0 4836.0 3228.0 4326.0 0 t 0 0 0 0 10255.0 267.0 33631.0 8793.0 0.0 5124.0 0.0 33631.0 0.0 0.0 25347.0 13616.0 11261.0 13436.0 11448.0 0
MA1136.1_rc_shift5 (FOSB::JUNB(var.2)_rc)				; oligos_8nt_mkv6_m41 versus MA1136.1_rc (FOSB::JUNB(var.2)_rc); m=14/27; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.713281; -----rTGACGTCAy----- ; cor=; Ncor= a 0 0 0 0 0 664.0 31.0 15.0 836.0 20.0 101.0 28.0 242.0 917.0 12.0 0 0 0 0 0 c 0 0 0 0 0 65.0 30.0 36.0 28.0 893.0 27.0 60.0 700.0 16.0 368.0 0 0 0 0 0 g 0 0 0 0 0 260.0 16.0 776.0 80.0 35.0 842.0 44.0 46.0 36.0 59.0 0 0 0 0 0 t 0 0 0 0 0 11.0 923.0 173.0 56.0 52.0 30.0 869.0 13.0 30.0 561.0 0 0 0 0 0
MA0488.1_rc_shift5 (JUN_rc)				; oligos_8nt_mkv6_m41 versus MA0488.1_rc (JUN_rc); m=15/27; ncol2=13; w=11; offset=1; strand=R; shift=5; score=0.70959; -----ATkACaTCATywt-- ; cor=; Ncor= a 0 0 0 0 0 16045.0 0.0 0.0 16499.0 0.0 13018.0 1.0 119.0 20968.0 0.0 2887.0 5929.0 5141.0 0 0 c 0 0 0 0 0 1016.0 0.0 0.0 0.0 20360.0 4512.0 0.0 20849.0 0.0 3713.0 9682.0 4985.0 4894.0 0 0 g 0 0 0 0 0 3704.0 0.0 14064.0 3531.0 608.0 3438.0 0.0 0.0 0.0 729.0 1903.0 2938.0 2792.0 0 0 t 0 0 0 0 0 203.0 20968.0 6904.0 938.0 0.0 0.0 20967.0 0.0 0.0 16526.0 6496.0 7116.0 8141.0 0 0
MA1145.1_shift3 (FOSL2::JUND(var.2))				; oligos_8nt_mkv6_m41 versus MA1145.1 (FOSL2::JUND(var.2)); m=16/27; ncol2=15; w=12; offset=-1; strand=D; shift=3; score=0.705857; ---kkrTkACGTCAycgc-- ; cor=; Ncor= a 0 0 0 198.0 219.0 559.0 26.0 7.0 943.0 12.0 135.0 28.0 33.0 972.0 23.0 217.0 162.0 248.0 0 0 c 0 0 0 177.0 189.0 45.0 27.0 46.0 6.0 911.0 15.0 12.0 942.0 6.0 345.0 434.0 222.0 288.0 0 0 g 0 0 0 286.0 340.0 340.0 10.0 678.0 31.0 35.0 823.0 10.0 15.0 11.0 55.0 104.0 416.0 241.0 0 0 t 0 0 0 339.0 252.0 57.0 937.0 268.0 20.0 41.0 28.0 950.0 11.0 11.0 577.0 245.0 200.0 223.0 0 0
MA1129.1_rc_shift5 (FOSL1::JUN(var.2)_rc)				; oligos_8nt_mkv6_m41 versus MA1129.1_rc (FOSL1::JUN(var.2)_rc); m=17/27; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.69711; -----rTgACGTcAy----- ; cor=; Ncor= a 0 0 0 0 0 641.0 30.0 35.0 827.0 24.0 95.0 43.0 240.0 919.0 26.0 0 0 0 0 0 c 0 0 0 0 0 71.0 31.0 58.0 27.0 847.0 38.0 106.0 672.0 24.0 266.0 0 0 0 0 0 g 0 0 0 0 0 264.0 22.0 670.0 105.0 36.0 845.0 26.0 56.0 30.0 69.0 0 0 0 0 0 t 0 0 0 0 0 24.0 917.0 238.0 41.0 93.0 22.0 825.0 33.0 28.0 639.0 0 0 0 0 0
MA0609.2_shift2 (CREM)				; oligos_8nt_mkv6_m41 versus MA0609.2 (CREM); m=18/27; ncol2=16; w=12; offset=-2; strand=D; shift=2; score=0.659544; --gcrgTGACGTCAcygc-- ; cor=; Ncor= a 0 0 3865.0 3966.0 5881.0 2936.0 559.0 434.0 15694.0 517.0 1582.0 400.0 672.0 15228.0 789.0 3757.0 3582.0 3801.0 0 0 c 0 0 4230.0 5521.0 2908.0 2159.0 730.0 1038.0 313.0 14031.0 901.0 622.0 14883.0 508.0 11146.0 4473.0 3957.0 5132.0 0 0 g 0 0 5132.0 3956.0 4474.0 11144.0 506.0 14883.0 619.0 897.0 14026.0 314.0 1039.0 730.0 2156.0 2910.0 5523.0 4230.0 0 0 t 0 0 3800.0 3584.0 3764.0 788.0 15232.0 672.0 401.0 1582.0 518.0 15691.0 433.0 561.0 2936.0 5887.0 3965.0 3864.0 0 0
MA1143.1_shift5 (FOSL1::JUND(var.2))				; oligos_8nt_mkv6_m41 versus MA1143.1 (FOSL1::JUND(var.2)); m=19/27; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.657972; -----rTGACgymay----- ; cor=; Ncor= a 0 0 0 0 0 561.0 36.0 39.0 870.0 32.0 116.0 117.0 546.0 645.0 123.0 0 0 0 0 0 c 0 0 0 0 0 75.0 50.0 101.0 45.0 835.0 59.0 262.0 330.0 66.0 401.0 0 0 0 0 0 g 0 0 0 0 0 324.0 44.0 777.0 41.0 64.0 649.0 39.0 83.0 100.0 82.0 0 0 0 0 0 t 0 0 0 0 0 40.0 870.0 82.0 44.0 68.0 176.0 582.0 41.0 188.0 394.0 0 0 0 0 0
MA1126.1_shift4 (FOS::JUN(var.2))				; oligos_8nt_mkv6_m41 versus MA1126.1 (FOS::JUN(var.2)); m=20/27; ncol2=16; w=12; offset=0; strand=D; shift=4; score=0.646698; ----drTgACGTCAtmmkty ; cor=; Ncor= a 0 0 0 0 266.0 556.0 47.0 42.0 748.0 80.0 131.0 40.0 53.0 907.0 30.0 299.0 322.0 190.0 161.0 203.0 c 0 0 0 0 63.0 45.0 74.0 112.0 31.0 838.0 114.0 23.0 846.0 24.0 234.0 322.0 313.0 178.0 75.0 291.0 g 0 0 0 0 419.0 369.0 62.0 655.0 135.0 41.0 722.0 32.0 44.0 36.0 60.0 160.0 161.0 261.0 238.0 207.0 t 0 0 0 0 252.0 30.0 816.0 191.0 86.0 41.0 34.0 905.0 57.0 33.0 676.0 220.0 204.0 371.0 526.0 298.0
MA0775.1_shift5 (MEIS3)				; oligos_8nt_mkv6_m41 versus MA0775.1 (MEIS3); m=21/27; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.509456; -----wTGACAgs------- ; cor=; Ncor= a 0 0 0 0 0 1866.0 465.0 0.0 7165.0 53.0 7165.0 1690.0 960.0 0 0 0 0 0 0 0 c 0 0 0 0 0 60.0 383.0 6.0 20.0 7165.0 8.0 1889.0 2342.0 0 0 0 0 0 0 0 g 0 0 0 0 0 1788.0 260.0 7165.0 455.0 8.0 468.0 7165.0 2888.0 0 0 0 0 0 0 0 t 0 0 0 0 0 3451.0 7165.0 0.0 53.0 160.0 145.0 2094.0 975.0 0 0 0 0 0 0 0
MA0498.2_shift5 (MEIS1)				; oligos_8nt_mkv6_m41 versus MA0498.2 (MEIS1); m=22/27; ncol2=7; w=7; offset=1; strand=D; shift=5; score=0.49606; -----wTGACAg-------- ; cor=; Ncor= a 0 0 0 0 0 23727.0 8690.0 0.0 77159.0 0.0 77159.0 17224.0 0 0 0 0 0 0 0 0 c 0 0 0 0 0 18797.0 5575.0 1249.0 2903.0 77159.0 0.0 14864.0 0 0 0 0 0 0 0 0 g 0 0 0 0 0 9714.0 3174.0 77159.0 672.0 0.0 9263.0 29965.0 0 0 0 0 0 0 0 0 t 0 0 0 0 0 24921.0 77159.0 0.0 0.0 1155.0 3861.0 15106.0 0 0 0 0 0 0 0 0
MA0774.1_shift5 (MEIS2)				; oligos_8nt_mkv6_m41 versus MA0774.1 (MEIS2); m=23/27; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.47608; -----tTGACAGs------- ; cor=; Ncor= a 0 0 0 0 0 408.0 31.0 0.0 1351.0 9.0 1351.0 83.0 157.0 0 0 0 0 0 0 0 c 0 0 0 0 0 264.0 3.0 0.0 3.0 1351.0 7.0 98.0 701.0 0 0 0 0 0 0 0 g 0 0 0 0 0 314.0 40.0 1351.0 25.0 0.0 4.0 1351.0 650.0 0 0 0 0 0 0 0 t 0 0 0 0 0 1351.0 1351.0 0.0 62.0 5.0 0.0 67.0 88.0 0 0 0 0 0 0 0
MA0604.1_shift5 (Atf1)				; oligos_8nt_mkv6_m41 versus MA0604.1 (Atf1); m=24/27; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.473253; -----rTGACGTa------- ; cor=; Ncor= a 0 0 0 0 0 462.0 24.0 0.0 1000.0 0.0 7.0 90.0 600.0 0 0 0 0 0 0 0 c 0 0 0 0 0 86.0 16.0 22.0 0.0 1000.0 0.0 198.0 138.0 0 0 0 0 0 0 0 g 0 0 0 0 0 387.0 0.0 803.0 0.0 0.0 993.0 0.0 163.0 0 0 0 0 0 0 0 t 0 0 0 0 0 65.0 960.0 175.0 0.0 0.0 0.0 712.0 100.0 0 0 0 0 0 0 0
MA1470.1_rc_shift0 (BACH2(var.2)_rc)				; oligos_8nt_mkv6_m41 versus MA1470.1_rc (BACH2(var.2)_rc); m=25/27; ncol2=20; w=12; offset=-4; strand=R; shift=0; score=0.458641; aWAksATSACGTCATsvTwt ; cor=; Ncor= a 166.0 224.0 236.0 54.0 31.0 259.0 0.0 0.0 323.0 0.0 0.0 0.0 0.0 317.0 3.0 0.0 93.0 46.0 90.0 61.0 c 46.0 3.0 1.0 68.0 189.0 0.0 0.0 116.0 0.0 327.0 0.0 1.0 326.0 0.0 0.0 114.0 93.0 27.0 26.0 50.0 g 33.0 9.0 25.0 94.0 100.0 63.0 15.0 320.0 0.0 0.0 324.0 0.0 0.0 0.0 0.0 196.0 85.0 11.0 11.0 32.0 t 76.0 79.0 65.0 106.0 2.0 0.0 322.0 0.0 0.0 0.0 0.0 323.0 96.0 4.0 324.0 15.0 50.0 250.0 202.0 178.0
MA0067.1_rc_shift3 (Pax2_rc)				; oligos_8nt_mkv6_m41 versus MA0067.1_rc (Pax2_rc); m=26/27; ncol2=8; w=7; offset=-1; strand=R; shift=3; score=0.450597; ---vmrTGAcw--------- ; cor=; Ncor= a 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 0 0 0 0 0 0 0 c 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 0 0 0 0 0 0 0 g 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 0 0 0 0 0 0 0 t 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0 0 0 0 0 0 0 0
MA1576.1_shift5 (THRB(var.3))				; oligos_8nt_mkv6_m41 versus MA1576.1 (THRB(var.3)); m=27/27; ncol2=19; w=11; offset=1; strand=D; shift=5; score=0.40485; -----rTGACCTyacrTGAC ; cor=; Ncor= a 0 0 0 0 0 119.0 0.0 28.0 389.0 0.0 0.0 13.0 11.0 263.0 42.0 102.0 0.0 0.0 389.0 0.0 c 0 0 0 0 0 31.0 8.0 89.0 19.0 389.0 389.0 75.0 134.0 28.0 221.0 86.0 0.0 0.0 11.0 389.0 g 0 0 0 0 0 157.0 0.0 389.0 17.0 4.0 59.0 38.0 93.0 89.0 71.0 205.0 6.0 389.0 0.0 0.0 t 0 0 0 0 0 82.0 381.0 45.0 71.0 17.0 20.0 389.0 151.0 9.0 54.0 0.0 393.0 3.0 86.0 2.0