One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_8nt_mkv6_m5/peak-motifs_oligos_8nt_mkv6_m5.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/oligos_8nt_mkv6_m5/peak-motifs_oligos_8nt_mkv6_m5_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv6_m5_shift0 ; 17 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_8nt_mkv6_m5_shift0 (oligos_8nt_mkv6_m5oligos_8nt_mkv6_m5)    
; oligos_8nt_mkv6_m5 (oligos_8nt_mkv6_m5oligos_8nt_mkv6_m5); m=0 (reference); ncol1=12; shift=0; ncol=14; ssCGCTTCCGss--
; Alignment reference
a	398	369	46	187	36	83	97	28	15	22	329	464	0	0
c	1191	1250	2875	91	2851	426	380	2926	2939	165	1168	1138	0	0
g	939	1026	150	2779	121	224	145	107	128	2864	1173	1019	0	0
t	574	457	31	45	94	2369	2480	41	20	51	432	481	0	0
MA0750.2_rc_shift0 (ZBTB7A_rc)
; oligos_8nt_mkv6_m5 versus MA0750.2_rc (ZBTB7A_rc); m=1/16; ncol2=13; w=12; offset=0; strand=R; shift=0; score=0.791754; sscaCTTCCGGsy-
; cor=; Ncor=
a	2266.0	1684.0	1270.0	8444.0	189.0	318.0	178.0	125.0	128.0	234.0	199.0	2105.0	2826.0	0
c	4669.0	5862.0	9142.0	1623.0	13112.0	261.0	335.0	14239.0	14130.0	624.0	1496.0	4397.0	4167.0	0
g	4856.0	4386.0	2485.0	3433.0	711.0	343.0	274.0	163.0	210.0	11293.0	12469.0	5356.0	3512.0	0
t	2850.0	2709.0	1744.0	1141.0	629.0	13719.0	13854.0	114.0	173.0	2490.0	477.0	2783.0	4136.0	0
MA0076.2_shift1 (ELK4)
; oligos_8nt_mkv6_m5 versus MA0076.2 (ELK4); m=2/16; ncol2=11; w=11; offset=1; strand=D; shift=1; score=0.779698; -scrCTTCCGGy--
; cor=; Ncor=
a	0	298.0	391.0	2034.0	0.0	8.0	0.0	0.0	0.0	0.0	0.0	290.0	0	0
c	0	1458.0	1905.0	145.0	2688.0	0.0	0.0	3427.0	3427.0	0.0	501.0	1253.0	0	0
g	0	886.0	570.0	1038.0	16.0	0.0	0.0	0.0	0.0	2915.0	2843.0	668.0	0	0
t	0	785.0	561.0	210.0	723.0	3419.0	3427.0	0.0	0.0	512.0	83.0	1216.0	0	0
MA0765.2_shift1 (ETV5)
; oligos_8nt_mkv6_m5 versus MA0765.2 (ETV5); m=3/16; ncol2=11; w=11; offset=1; strand=D; shift=1; score=0.739203; -bcACTTCCGsy--
; cor=; Ncor=
a	0	4531.0	4782.0	19410.0	312.0	1043.0	222.0	243.0	367.0	1295.0	3017.0	4679.0	0	0
c	0	8003.0	10307.0	2443.0	24041.0	1145.0	956.0	25484.0	25061.0	1743.0	6921.0	8378.0	0	0
g	0	7117.0	6129.0	3017.0	994.0	408.0	816.0	336.0	498.0	18757.0	11944.0	6039.0	0	0
t	0	6667.0	5100.0	1448.0	971.0	23722.0	24324.0	255.0	392.0	4523.0	4436.0	7222.0	0	0
MA0645.1_rc_shift2 (ETV6_rc)
; oligos_8nt_mkv6_m5 versus MA0645.1_rc (ETV6_rc); m=4/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.661076; --yACTTCCGsk--
; cor=; Ncor=
a	0	0	1091.0	6687.0	0.0	41.0	0.0	22.0	13.0	308.0	441.0	2002.0	0	0
c	0	0	3205.0	233.0	6687.0	32.0	7.0	6687.0	6687.0	397.0	4292.0	4684.0	0	0
g	0	0	342.0	834.0	52.0	13.0	0.0	0.0	0.0	6379.0	2394.0	6562.0	0	0
t	0	0	2049.0	184.0	768.0	6687.0	6687.0	21.0	7.0	1476.0	342.0	9414.0	0	0
MA0759.1_rc_shift2 (ELK3_rc)
; oligos_8nt_mkv6_m5 versus MA0759.1_rc (ELK3_rc); m=5/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.622481; --yACTTCCGGt--
; cor=; Ncor=
a	0	0	492.0	2237.0	58.0	353.0	1.0	78.0	0.0	8.0	77.0	456.0	0	0
c	0	0	649.0	168.0	2237.0	0.0	3.0	2237.0	2237.0	14.0	223.0	713.0	0	0
g	0	0	318.0	487.0	245.0	43.0	7.0	4.0	0.0	2237.0	2237.0	294.0	0	0
t	0	0	778.0	151.0	498.0	2237.0	2237.0	2.0	1.0	120.0	269.0	2237.0	0	0
MA0028.2_rc_shift2 (ELK1_rc)
; oligos_8nt_mkv6_m5 versus MA0028.2_rc (ELK1_rc); m=6/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.619162; --yACTTCCGGT--
; cor=; Ncor=
a	0	0	8587.0	45807.0	294.0	2165.0	25.0	713.0	26.0	21.0	236.0	5718.0	0	0
c	0	0	17273.0	1123.0	45807.0	60.0	62.0	45807.0	45807.0	59.0	1478.0	12959.0	0	0
g	0	0	6673.0	6309.0	2361.0	333.0	233.0	41.0	21.0	45807.0	45807.0	2750.0	0	0
t	0	0	13274.0	916.0	3016.0	45807.0	45807.0	4.0	0.0	359.0	1217.0	45807.0	0	0
MA0098.3_rc_shift2 (ETS1_rc)
; oligos_8nt_mkv6_m5 versus MA0098.3_rc (ETS1_rc); m=7/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.614993; --yAyWTCCGGT--
; cor=; Ncor=
a	0	0	396.0	1970.0	12.0	909.0	0.0	12.0	0.0	0.0	22.0	241.0	0	0
c	0	0	1083.0	124.0	1580.0	31.0	0.0	2683.0	2683.0	7.0	297.0	640.0	0	0
g	0	0	401.0	712.0	21.0	9.0	0.0	0.0	21.0	2683.0	2683.0	210.0	0	0
t	0	0	803.0	89.0	1102.0	2683.0	2683.0	0.0	0.0	425.0	180.0	2683.0	0	0
MA0156.2_rc_shift2 (FEV_rc)
; oligos_8nt_mkv6_m5 versus MA0156.2_rc (FEV_rc); m=8/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.61205; --yAyTTCCGGt--
; cor=; Ncor=
a	0	0	1499.0	7249.0	92.0	2196.0	18.0	9.0	2.0	3.0	243.0	1629.0	0	0
c	0	0	2257.0	624.0	7249.0	6.0	3.0	7249.0	7249.0	51.0	718.0	1555.0	0	0
g	0	0	1358.0	1821.0	366.0	154.0	11.0	1.0	0.0	7249.0	7249.0	574.0	0	0
t	0	0	2134.0	444.0	3318.0	7249.0	7249.0	2.0	13.0	614.0	1165.0	7249.0	0	0
MA0763.1_rc_shift2 (ETV3_rc)
; oligos_8nt_mkv6_m5 versus MA0763.1_rc (ETV3_rc); m=9/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.60991; --cACTTCCGGT--
; cor=; Ncor=
a	0	0	25.0	215.0	0.0	71.0	4.0	16.0	14.0	13.0	31.0	24.0	0	0
c	0	0	98.0	7.0	215.0	0.0	0.0	215.0	215.0	0.0	14.0	38.0	0	0
g	0	0	41.0	32.0	14.0	0.0	8.0	0.0	0.0	215.0	215.0	27.0	0	0
t	0	0	52.0	0.0	58.0	215.0	215.0	0.0	0.0	9.0	18.0	215.0	0	0
MA0474.2_rc_shift2 (ERG_rc)
; oligos_8nt_mkv6_m5 versus MA0474.2_rc (ERG_rc); m=10/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.609856; --cAyTTCCGGT--
; cor=; Ncor=
a	0	0	792.0	4566.0	28.0	1245.0	7.0	29.0	0.0	6.0	97.0	928.0	0	0
c	0	0	1668.0	355.0	2576.0	7.0	0.0	4566.0	4566.0	22.0	398.0	848.0	0	0
g	0	0	1100.0	1586.0	100.0	119.0	20.0	1.0	0.0	4566.0	4566.0	268.0	0	0
t	0	0	1006.0	137.0	1990.0	4566.0	4566.0	0.0	1.0	635.0	646.0	4566.0	0	0
MA0475.2_rc_shift2 (FLI1_rc)
; oligos_8nt_mkv6_m5 versus MA0475.2_rc (FLI1_rc); m=11/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.608039; --cAyTTCCGGT--
; cor=; Ncor=
a	0	0	6668.0	32413.0	83.0	6065.0	11.0	60.0	2.0	0.0	292.0	4483.0	0	0
c	0	0	18560.0	1986.0	24484.0	24.0	19.0	43586.0	43586.0	90.0	1858.0	5132.0	0	0
g	0	0	7716.0	11173.0	563.0	230.0	21.0	0.0	0.0	43586.0	43586.0	1460.0	0	0
t	0	0	10642.0	897.0	19102.0	43586.0	43586.0	0.0	5.0	2806.0	2926.0	43586.0	0	0
MA0760.1_rc_shift2 (ERF_rc)
; oligos_8nt_mkv6_m5 versus MA0760.1_rc (ERF_rc); m=12/16; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.603759; --yAyTTCCGGT--
; cor=; Ncor=
a	0	0	22.0	205.0	0.0	30.0	2.0	0.0	0.0	0.0	34.0	3.0	0	0
c	0	0	92.0	11.0	205.0	0.0	3.0	205.0	205.0	6.0	8.0	33.0	0	0
g	0	0	28.0	41.0	17.0	0.0	3.0	3.0	0.0	205.0	205.0	4.0	0	0
t	0	0	62.0	0.0	82.0	205.0	205.0	0.0	0.0	25.0	7.0	205.0	0	0
MA0136.2_rc_shift2 (ELF5_rc)
; oligos_8nt_mkv6_m5 versus MA0136.2_rc (ELF5_rc); m=13/16; ncol2=11; w=10; offset=2; strand=R; shift=2; score=0.591299; --yaCTTCCksgt-
; cor=; Ncor=
a	0	0	663.0	2470.0	84.0	245.0	4.0	25.0	20.0	56.0	97.0	866.0	793.0	0
c	0	0	762.0	312.0	2857.0	0.0	1.0	3315.0	3307.0	309.0	1266.0	955.0	301.0	0
g	0	0	371.0	716.0	155.0	61.0	11.0	0.0	0.0	2528.0	2453.0	2298.0	252.0	0
t	0	0	959.0	477.0	890.0	2646.0	2699.0	5.0	3.0	1458.0	987.0	1221.0	2416.0	0
MA1484.1_rc_shift3 (ETS2_rc)
; oligos_8nt_mkv6_m5 versus MA1484.1_rc (ETS2_rc); m=14/16; ncol2=10; w=9; offset=3; strand=R; shift=3; score=0.576029; ---rCWTCCGGTy-
; cor=; Ncor=
a	0	0	0	8190.0	0.0	4953.0	0.0	0.0	5.0	0.0	0.0	727.0	2945.0	0
c	0	0	0	415.0	13730.0	0.0	7.0	16738.0	16738.0	0.0	1306.0	3136.0	5702.0	0
g	0	0	0	8136.0	0.0	204.0	13.0	7.0	0.0	16738.0	16738.0	471.0	2830.0	0
t	0	0	0	0.0	3050.0	11582.0	16738.0	4.0	7.0	1279.0	643.0	16738.0	5261.0	0
MA1483.1_rc_shift2 (ELF2_rc)
; oligos_8nt_mkv6_m5 versus MA1483.1_rc (ELF2_rc); m=15/16; ncol2=12; w=10; offset=2; strand=R; shift=2; score=0.540813; --yACTTCCGGGTt
; cor=; Ncor=
a	0	0	2291.0	20352.0	0.0	89.0	0.0	8.0	0.0	7.0	17.0	2372.0	3941.0	4123.0
c	0	0	7278.0	177.0	20352.0	0.0	6.0	20352.0	20352.0	5.0	1806.0	980.0	428.0	3382.0
g	0	0	2743.0	2943.0	383.0	6.0	5.0	2.0	0.0	20352.0	20352.0	20352.0	1981.0	2913.0
t	0	0	8041.0	946.0	3123.0	20352.0	20352.0	21.0	0.0	592.0	544.0	6114.0	20352.0	9934.0
MA0641.1_rc_shift2 (ELF4_rc)
; oligos_8nt_mkv6_m5 versus MA0641.1_rc (ELF4_rc); m=16/16; ncol2=12; w=10; offset=2; strand=R; shift=2; score=0.538963; --yACTTCCGGGTt
; cor=; Ncor=
a	0	0	113.0	979.0	6.0	4.0	2.0	2.0	0.0	0.0	1.0	106.0	149.0	192.0
c	0	0	463.0	28.0	1207.0	2.0	2.0	1226.0	1226.0	6.0	105.0	75.0	15.0	160.0
g	0	0	83.0	56.0	18.0	5.0	0.0	0.0	0.0	997.0	990.0	930.0	73.0	109.0
t	0	0	403.0	4.0	43.0	737.0	739.0	0.0	1.0	54.0	17.0	198.0	705.0	598.0