One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/positions_8nt_m10/peak-motifs_positions_8nt_m10.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_motifs/positions_8nt_m10/peak-motifs_positions_8nt_m10_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: positions_8nt_m10_shift0 ; 23 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
positions_8nt_m10_shift0 (positions_8nt_m10positions_8nt_m10)
; positions_8nt_m10 (positions_8nt_m10positions_8nt_m10); m=0 (reference); ncol1=16; shift=0; ncol=16; vrgCACAGCTGTTCyb ; Alignment reference a 418 447 331 119 1385 4 1635 17 15 7 5 38 28 75 355 264 c 429 377 398 1393 120 1641 4 81 1597 5 16 102 116 1361 582 540 g 462 481 603 113 64 10 9 1551 27 3 1630 31 84 132 174 417 t 353 357 330 37 93 7 14 13 23 1647 11 1491 1434 94 551 441

MA0832.1_rc_shift1 (Tcf21_rc)
; positions_8nt_m10 versus MA0832.1_rc (Tcf21_rc); m=1/22; ncol2=14; w=14; offset=1; strand=R; shift=1; score=0.734442; -ryAACAGCTGTTry- ; cor=; Ncor= a 0 60.0 19.0 171.0 171.0 0.0 171.0 1.0 2.0 0.0 0.0 0.0 3.0 46.0 17.0 0 c 0 32.0 80.0 0.0 20.0 171.0 0.0 1.0 171.0 0.0 0.0 0.0 23.0 22.0 70.0 0 g 0 49.0 23.0 23.0 4.0 0.0 0.0 171.0 0.0 1.0 171.0 10.0 1.0 76.0 29.0 0 t 0 30.0 50.0 5.0 0.0 0.0 0.0 0.0 0.0 171.0 0.0 171.0 171.0 28.0 55.0 0

MA1641.1_shift2 (MYF5)
; positions_8nt_m10 versus MA1641.1 (MYF5); m=2/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.670238; --gvaCAGCTGtbc-- ; cor=; Ncor= a 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 0 0 c 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 0 0 g 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 0 0 t 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0 0 0

MA1619.1_shift2 (Ptf1a(var.2))
; positions_8nt_m10 versus MA1619.1 (Ptf1a(var.2)); m=3/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.66567; --rmaCAGCTGtky-- ; cor=; Ncor= a 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 0 c 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 0 g 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 0 t 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0 0

MA1621.1_shift1 (Rbpjl)
; positions_8nt_m10 versus MA1621.1 (Rbpjl); m=4/22; ncol2=14; w=14; offset=1; strand=D; shift=1; score=0.652872; -svmaCACCTGtsyc- ; cor=; Ncor= a 0 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 0 c 0 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 0 g 0 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 0 t 0 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0 0

MA1618.1_shift2 (Ptf1a)
; positions_8nt_m10 versus MA1618.1 (Ptf1a); m=5/22; ncol2=13; w=13; offset=2; strand=D; shift=2; score=0.627868; --dmaCAGATGttkh- ; cor=; Ncor= a 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 3754.0 0 c 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 3689.0 0 g 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 3376.0 0 t 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0 3622.0 0

MA1485.1_rc_shift1 (FERD3L_rc)
; positions_8nt_m10 versus MA1485.1_rc (FERD3L_rc); m=6/22; ncol2=14; w=14; offset=1; strand=R; shift=1; score=0.62327; -GTrACAGCTGkyrC- ; cor=; Ncor= a 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 225.0 0 c 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 29605.0 0 g 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 68.0 0 t 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0 2158.0 0

MA0500.2_shift2 (MYOG)
; positions_8nt_m10 versus MA0500.2 (MYOG); m=7/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.601811; --sarCAGCTGyts-- ; cor=; Ncor= a 0 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 0 c 0 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 0 g 0 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 0 t 0 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0 0

MA0521.1_rc_shift2 (Tcf12_rc)
; positions_8nt_m10 versus MA0521.1_rc (Tcf12_rc); m=8/22; ncol2=11; w=11; offset=2; strand=R; shift=2; score=0.589439; --cwsCAGCTGYy--- ; cor=; Ncor= a 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 0 c 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 0 g 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 0 t 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0 0

MA1620.1_shift2 (Ptf1a(var.3))
; positions_8nt_m10 versus MA1620.1 (Ptf1a(var.3)); m=9/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.584777; --rmaCACCTGtky-- ; cor=; Ncor= a 0 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 0 c 0 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 0 g 0 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 0 t 0 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0 0

MA1655.1_rc_shift4 (ZNF341_rc)
; positions_8nt_m10 versus MA1655.1_rc (ZNF341_rc); m=10/22; ncol2=12; w=12; offset=4; strand=R; shift=4; score=0.583775; ----stgGCTGTTCyc ; cor=; Ncor= a 0 0 0 0 3536.0 4320.0 2411.0 228.0 229.0 234.0 581.0 241.0 186.0 1442.0 2599.0 4408.0 c 0 0 0 0 5691.0 4672.0 2289.0 270.0 17972.0 468.0 1033.0 576.0 513.0 13739.0 8832.0 5798.0 g 0 0 0 0 5745.0 4431.0 10946.0 18003.0 359.0 399.0 16813.0 211.0 955.0 2043.0 2180.0 4256.0 t 0 0 0 0 3756.0 5305.0 3082.0 227.0 168.0 17627.0 301.0 17700.0 17074.0 1504.0 5117.0 4266.0

MA0499.2_shift2 (MYOD1)
; positions_8nt_m10 versus MA0499.2 (MYOD1); m=11/22; ncol2=13; w=13; offset=2; strand=D; shift=2; score=0.576851; --cwgCACCTGTymy- ; cor=; Ncor= a 0 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 0 c 0 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 0 g 0 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 0 t 0 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0 0

MA0665.1_shift3 (MSC)
; positions_8nt_m10 versus MA0665.1 (MSC); m=12/22; ncol2=10; w=10; offset=3; strand=D; shift=3; score=0.561536; ---AACAGCTGTT--- ; cor=; Ncor= a 0 0 0 69.0 69.0 0.0 69.0 0.0 0.0 0.0 0.0 3.0 0.0 0 0 0 c 0 0 0 0.0 12.0 69.0 0.0 12.0 69.0 0.0 0.0 10.0 9.0 0 0 0 g 0 0 0 18.0 3.0 3.0 0.0 69.0 3.0 0.0 69.0 4.0 4.0 0 0 0 t 0 0 0 7.0 0.0 1.0 0.0 0.0 0.0 69.0 4.0 69.0 69.0 0 0 0

MA1467.1_rc_shift3 (ATOH1(var.2)_rc)
; positions_8nt_m10 versus MA1467.1_rc (ATOH1(var.2)_rc); m=13/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.552692; ---RACAGCTGTT--- ; cor=; Ncor= a 0 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 g 0 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 t 0 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0

MA1472.1_rc_shift3 (BHLHA15(var.2)_rc)
; positions_8nt_m10 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=14/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.546606; ---rrCAGCTGbt--- ; cor=; Ncor= a 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 c 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 g 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 t 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0

MA0667.1_rc_shift3 (MYF6_rc)
; positions_8nt_m10 versus MA0667.1_rc (MYF6_rc); m=15/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.545805; ---RACAGyTGTT--- ; cor=; Ncor= a 0 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 0 0 c 0 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 0 0 g 0 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 0 0 t 0 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0 0 0

MA0091.1_rc_shift3 (TAL1::TCF3_rc)
; positions_8nt_m10 versus MA0091.1_rc (TAL1::TCF3_rc); m=16/22; ncol2=12; w=12; offset=3; strand=R; shift=3; score=0.544434; ---AmCAKMTGkTck- ; cor=; Ncor= a 0 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 9.0 0 c 0 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 8.0 0 g 0 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 14.0 0 t 0 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0 13.0 0

MA0691.1_rc_shift3 (TFAP4_rc)
; positions_8nt_m10 versus MA0691.1_rc (TFAP4_rc); m=17/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.541293; ---AwCAGCTGwT--- ; cor=; Ncor= a 0 0 0 3423.0 1613.0 0.0 3423.0 6.0 14.0 0.0 0.0 1264.0 228.0 0 0 0 c 0 0 0 433.0 333.0 3423.0 0.0 49.0 3423.0 0.0 0.0 62.0 337.0 0 0 0 g 0 0 0 682.0 114.0 1.0 1.0 3423.0 85.0 2.0 3423.0 546.0 500.0 0 0 0 t 0 0 0 299.0 1810.0 0.0 1.0 21.0 2.0 3423.0 0.0 2159.0 3423.0 0 0 0

MA0816.1_rc_shift3 (Ascl2_rc)
; positions_8nt_m10 versus MA0816.1_rc (Ascl2_rc); m=18/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.511323; ---rrCAGCTGyt--- ; cor=; Ncor= a 0 0 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 0 c 0 0 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 0 g 0 0 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 0 t 0 0 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0 0

MA1635.1_rc_shift3 (BHLHE22(var.2)_rc)
; positions_8nt_m10 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=19/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.508973; ---csCAGCTGsg--- ; cor=; Ncor= a 0 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 0 c 0 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 0 g 0 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 0 t 0 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0 0

MA0048.2_shift3 (NHLH1)
; positions_8nt_m10 versus MA0048.2 (NHLH1); m=20/22; ncol2=10; w=10; offset=3; strand=D; shift=3; score=0.483693; ---cGCAGCTGCk--- ; cor=; Ncor= a 0 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 c 0 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 g 0 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 t 0 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0

MA1100.2_rc_shift3 (ASCL1_rc)
; positions_8nt_m10 versus MA1100.2_rc (ASCL1_rc); m=21/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.478732; ---rgCAGCTGyy--- ; cor=; Ncor= a 0 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 0 c 0 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 0 g 0 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 0 t 0 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0 0

MA0820.1_rc_shift3 (FIGLA_rc)
; positions_8nt_m10 versus MA0820.1_rc (FIGLA_rc); m=22/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.476441; ---wmCAGGTGkw--- ; cor=; Ncor= a 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 0 0 c 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 0 0 g 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 0 0 t 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_8nt_m10_shift0 (positions_8nt_m10positions_8nt_m10)				; positions_8nt_m10 (positions_8nt_m10positions_8nt_m10); m=0 (reference); ncol1=16; shift=0; ncol=16; vrgCACAGCTGTTCyb ; Alignment reference a 418 447 331 119 1385 4 1635 17 15 7 5 38 28 75 355 264 c 429 377 398 1393 120 1641 4 81 1597 5 16 102 116 1361 582 540 g 462 481 603 113 64 10 9 1551 27 3 1630 31 84 132 174 417 t 353 357 330 37 93 7 14 13 23 1647 11 1491 1434 94 551 441
MA0832.1_rc_shift1 (Tcf21_rc)				; positions_8nt_m10 versus MA0832.1_rc (Tcf21_rc); m=1/22; ncol2=14; w=14; offset=1; strand=R; shift=1; score=0.734442; -ryAACAGCTGTTry- ; cor=; Ncor= a 0 60.0 19.0 171.0 171.0 0.0 171.0 1.0 2.0 0.0 0.0 0.0 3.0 46.0 17.0 0 c 0 32.0 80.0 0.0 20.0 171.0 0.0 1.0 171.0 0.0 0.0 0.0 23.0 22.0 70.0 0 g 0 49.0 23.0 23.0 4.0 0.0 0.0 171.0 0.0 1.0 171.0 10.0 1.0 76.0 29.0 0 t 0 30.0 50.0 5.0 0.0 0.0 0.0 0.0 0.0 171.0 0.0 171.0 171.0 28.0 55.0 0
MA1641.1_shift2 (MYF5)				; positions_8nt_m10 versus MA1641.1 (MYF5); m=2/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.670238; --gvaCAGCTGtbc-- ; cor=; Ncor= a 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 0 0 c 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 0 0 g 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 0 0 t 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0 0 0
MA1619.1_shift2 (Ptf1a(var.2))				; positions_8nt_m10 versus MA1619.1 (Ptf1a(var.2)); m=3/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.66567; --rmaCAGCTGtky-- ; cor=; Ncor= a 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 0 c 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 0 g 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 0 t 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0 0
MA1621.1_shift1 (Rbpjl)				; positions_8nt_m10 versus MA1621.1 (Rbpjl); m=4/22; ncol2=14; w=14; offset=1; strand=D; shift=1; score=0.652872; -svmaCACCTGtsyc- ; cor=; Ncor= a 0 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 0 c 0 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 0 g 0 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 0 t 0 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0 0
MA1618.1_shift2 (Ptf1a)				; positions_8nt_m10 versus MA1618.1 (Ptf1a); m=5/22; ncol2=13; w=13; offset=2; strand=D; shift=2; score=0.627868; --dmaCAGATGttkh- ; cor=; Ncor= a 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 3754.0 0 c 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 3689.0 0 g 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 3376.0 0 t 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0 3622.0 0
MA1485.1_rc_shift1 (FERD3L_rc)				; positions_8nt_m10 versus MA1485.1_rc (FERD3L_rc); m=6/22; ncol2=14; w=14; offset=1; strand=R; shift=1; score=0.62327; -GTrACAGCTGkyrC- ; cor=; Ncor= a 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 225.0 0 c 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 29605.0 0 g 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 68.0 0 t 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0 2158.0 0
MA0500.2_shift2 (MYOG)				; positions_8nt_m10 versus MA0500.2 (MYOG); m=7/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.601811; --sarCAGCTGyts-- ; cor=; Ncor= a 0 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 0 c 0 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 0 g 0 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 0 t 0 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0 0
MA0521.1_rc_shift2 (Tcf12_rc)				; positions_8nt_m10 versus MA0521.1_rc (Tcf12_rc); m=8/22; ncol2=11; w=11; offset=2; strand=R; shift=2; score=0.589439; --cwsCAGCTGYy--- ; cor=; Ncor= a 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 0 c 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 0 g 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 0 t 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0 0
MA1620.1_shift2 (Ptf1a(var.3))				; positions_8nt_m10 versus MA1620.1 (Ptf1a(var.3)); m=9/22; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.584777; --rmaCACCTGtky-- ; cor=; Ncor= a 0 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 0 c 0 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 0 g 0 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 0 t 0 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0 0
MA1655.1_rc_shift4 (ZNF341_rc)				; positions_8nt_m10 versus MA1655.1_rc (ZNF341_rc); m=10/22; ncol2=12; w=12; offset=4; strand=R; shift=4; score=0.583775; ----stgGCTGTTCyc ; cor=; Ncor= a 0 0 0 0 3536.0 4320.0 2411.0 228.0 229.0 234.0 581.0 241.0 186.0 1442.0 2599.0 4408.0 c 0 0 0 0 5691.0 4672.0 2289.0 270.0 17972.0 468.0 1033.0 576.0 513.0 13739.0 8832.0 5798.0 g 0 0 0 0 5745.0 4431.0 10946.0 18003.0 359.0 399.0 16813.0 211.0 955.0 2043.0 2180.0 4256.0 t 0 0 0 0 3756.0 5305.0 3082.0 227.0 168.0 17627.0 301.0 17700.0 17074.0 1504.0 5117.0 4266.0
MA0499.2_shift2 (MYOD1)				; positions_8nt_m10 versus MA0499.2 (MYOD1); m=11/22; ncol2=13; w=13; offset=2; strand=D; shift=2; score=0.576851; --cwgCACCTGTymy- ; cor=; Ncor= a 0 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 0 c 0 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 0 g 0 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 0 t 0 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0 0
MA0665.1_shift3 (MSC)				; positions_8nt_m10 versus MA0665.1 (MSC); m=12/22; ncol2=10; w=10; offset=3; strand=D; shift=3; score=0.561536; ---AACAGCTGTT--- ; cor=; Ncor= a 0 0 0 69.0 69.0 0.0 69.0 0.0 0.0 0.0 0.0 3.0 0.0 0 0 0 c 0 0 0 0.0 12.0 69.0 0.0 12.0 69.0 0.0 0.0 10.0 9.0 0 0 0 g 0 0 0 18.0 3.0 3.0 0.0 69.0 3.0 0.0 69.0 4.0 4.0 0 0 0 t 0 0 0 7.0 0.0 1.0 0.0 0.0 0.0 69.0 4.0 69.0 69.0 0 0 0
MA1467.1_rc_shift3 (ATOH1(var.2)_rc)				; positions_8nt_m10 versus MA1467.1_rc (ATOH1(var.2)_rc); m=13/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.552692; ---RACAGCTGTT--- ; cor=; Ncor= a 0 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 g 0 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 t 0 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0
MA1472.1_rc_shift3 (BHLHA15(var.2)_rc)				; positions_8nt_m10 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=14/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.546606; ---rrCAGCTGbt--- ; cor=; Ncor= a 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 c 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 g 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 t 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0
MA0667.1_rc_shift3 (MYF6_rc)				; positions_8nt_m10 versus MA0667.1_rc (MYF6_rc); m=15/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.545805; ---RACAGyTGTT--- ; cor=; Ncor= a 0 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 0 0 c 0 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 0 0 g 0 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 0 0 t 0 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0 0 0
MA0091.1_rc_shift3 (TAL1::TCF3_rc)				; positions_8nt_m10 versus MA0091.1_rc (TAL1::TCF3_rc); m=16/22; ncol2=12; w=12; offset=3; strand=R; shift=3; score=0.544434; ---AmCAKMTGkTck- ; cor=; Ncor= a 0 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 9.0 0 c 0 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 8.0 0 g 0 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 14.0 0 t 0 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0 13.0 0
MA0691.1_rc_shift3 (TFAP4_rc)				; positions_8nt_m10 versus MA0691.1_rc (TFAP4_rc); m=17/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.541293; ---AwCAGCTGwT--- ; cor=; Ncor= a 0 0 0 3423.0 1613.0 0.0 3423.0 6.0 14.0 0.0 0.0 1264.0 228.0 0 0 0 c 0 0 0 433.0 333.0 3423.0 0.0 49.0 3423.0 0.0 0.0 62.0 337.0 0 0 0 g 0 0 0 682.0 114.0 1.0 1.0 3423.0 85.0 2.0 3423.0 546.0 500.0 0 0 0 t 0 0 0 299.0 1810.0 0.0 1.0 21.0 2.0 3423.0 0.0 2159.0 3423.0 0 0 0
MA0816.1_rc_shift3 (Ascl2_rc)				; positions_8nt_m10 versus MA0816.1_rc (Ascl2_rc); m=18/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.511323; ---rrCAGCTGyt--- ; cor=; Ncor= a 0 0 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 0 c 0 0 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 0 g 0 0 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 0 t 0 0 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0 0
MA1635.1_rc_shift3 (BHLHE22(var.2)_rc)				; positions_8nt_m10 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=19/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.508973; ---csCAGCTGsg--- ; cor=; Ncor= a 0 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 0 c 0 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 0 g 0 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 0 t 0 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0 0
MA0048.2_shift3 (NHLH1)				; positions_8nt_m10 versus MA0048.2 (NHLH1); m=20/22; ncol2=10; w=10; offset=3; strand=D; shift=3; score=0.483693; ---cGCAGCTGCk--- ; cor=; Ncor= a 0 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 c 0 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 g 0 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 t 0 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0
MA1100.2_rc_shift3 (ASCL1_rc)				; positions_8nt_m10 versus MA1100.2_rc (ASCL1_rc); m=21/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.478732; ---rgCAGCTGyy--- ; cor=; Ncor= a 0 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 0 c 0 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 0 g 0 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 0 t 0 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0 0
MA0820.1_rc_shift3 (FIGLA_rc)				; positions_8nt_m10 versus MA0820.1_rc (FIGLA_rc); m=22/22; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.476441; ---wmCAGGTGkw--- ; cor=; Ncor= a 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 0 0 c 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 0 0 g 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 0 0 t 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0 0 0