One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep1_motifs50/results/discovered_motifs/peak-motifs_motifs_discovered.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep1_motifs50/results/discovered_vs_db/peak-motifs_motifs_vs_db_jaspar_core_nonredundant_vertebrates.tab

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m19_shift7 ; 17 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m19_shift7 (oligos_6nt_mkv4_m19oligos_6nt_mkv4_m19)				; oligos_6nt_mkv4_m19 (oligos_6nt_mkv4_m19oligos_6nt_mkv4_m19); m=0 (reference); ncol1=10; shift=7; ncol=19; -------gsTGGGAAgs-- ; Alignment reference a 0 0 0 0 0 0 0 1168 958 0 0 0 0 6763 6763 1508 1598 0 0 c 0 0 0 0 0 0 0 1672 2977 0 3 0 0 0 0 1576 1717 0 0 g 0 0 0 0 0 0 0 2294 1830 0 6760 6763 6763 0 0 2594 2185 0 0 t 0 0 0 0 0 0 0 1629 998 6763 0 0 0 0 0 1085 1263 0 0
MA1116.1_shift7 (RBPJ)				; oligos_6nt_mkv4_m19 versus MA1116.1 (RBPJ); m=1/16; ncol2=10; w=10; offset=0; strand=D; shift=7; score=0.992585; -------bsTGGGAAmg-- ; cor=; Ncor= a 0 0 0 0 0 0 0 345.0 489.0 2.0 35.0 9.0 7.0 2369.0 2382.0 742.0 565.0 0 0 c 0 0 0 0 0 0 0 842.0 872.0 12.0 25.0 20.0 8.0 0.0 15.0 655.0 579.0 0 0 g 0 0 0 0 0 0 0 604.0 787.0 2.0 2341.0 2313.0 2309.0 4.0 1.0 592.0 711.0 0 0 t 0 0 0 0 0 0 0 611.0 254.0 2386.0 1.0 60.0 78.0 29.0 4.0 413.0 547.0 0 0
MA0606.1_rc_shift7 (NFAT5_rc)				; oligos_6nt_mkv4_m19 versus MA0606.1_rc (NFAT5_rc); m=2/16; ncol2=10; w=10; offset=0; strand=R; shift=7; score=0.724761; -------wrTGGAAAat-- ; cor=; Ncor= a 0 0 0 0 0 0 0 322.0 548.0 85.0 89.0 85.0 827.0 1000.0 1000.0 649.0 210.0 0 0 c 0 0 0 0 0 0 0 248.0 41.0 0.0 85.0 0.0 0.0 0.0 0.0 88.0 210.0 0 0 g 0 0 0 0 0 0 0 163.0 287.0 84.0 826.0 915.0 84.0 0.0 0.0 88.0 210.0 0 0 t 0 0 0 0 0 0 0 268.0 124.0 831.0 0.0 0.0 89.0 0.0 0.0 176.0 371.0 0 0
MA0519.1_rc_shift6 (Stat5a::Stat5b_rc)				; oligos_6nt_mkv4_m19 versus MA0519.1_rc (Stat5a::Stat5b_rc); m=3/16; ncol2=11; w=10; offset=-1; strand=R; shift=6; score=0.695262; ------TTCYkGGAAay-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0 1526.0 0.0 824.0 3326.0 3449.0 166.0 14907.0 16507.0 7937.0 3584.0 0 0 c 0 0 0 0 0 0 1621.0 0.0 16507.0 4140.0 0.0 0.0 0.0 0.0 0.0 2901.0 4425.0 0 0 g 0 0 0 0 0 0 0.0 93.0 0.0 0.0 6137.0 12795.0 16341.0 1600.0 0.0 3596.0 2326.0 0 0 t 0 0 0 0 0 0 14886.0 14888.0 0.0 11543.0 7044.0 263.0 0.0 0.0 0.0 2073.0 6172.0 0 0
MA1601.1_shift6 (ZNF75D)				; oligos_6nt_mkv4_m19 versus MA1601.1 (ZNF75D); m=4/16; ncol2=10; w=9; offset=-1; strand=D; shift=6; score=0.688225; ------rtGTGGGArA--- ; cor=; Ncor= a 0 0 0 0 0 0 2111.0 1057.0 2.0 10.0 26.0 46.0 24.0 6706.0 4094.0 5245.0 0 0 0 c 0 0 0 0 0 0 1573.0 715.0 0.0 59.0 18.0 44.0 29.0 20.0 576.0 256.0 0 0 0 g 0 0 0 0 0 0 1850.0 1468.0 6757.0 4.0 6710.0 6545.0 6678.0 15.0 1693.0 746.0 0 0 0 t 0 0 0 0 0 0 1225.0 3519.0 0.0 6686.0 5.0 124.0 28.0 18.0 396.0 512.0 0 0 0
MA1122.1_shift6 (TFDP1)				; oligos_6nt_mkv4_m19 versus MA1122.1 (TFDP1); m=5/16; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.648329; ------gsGCGGGAAss-- ; cor=; Ncor= a 0 0 0 0 0 0 411.0 263.0 48.0 28.0 14.0 36.0 27.0 1855.0 1645.0 465.0 381.0 0 0 c 0 0 0 0 0 0 491.0 684.0 71.0 1886.0 54.0 80.0 32.0 24.0 170.0 647.0 604.0 0 0 g 0 0 0 0 0 0 777.0 940.0 1862.0 22.0 1932.0 1865.0 1919.0 98.0 137.0 648.0 648.0 0 0 t 0 0 0 0 0 0 328.0 120.0 26.0 71.0 7.0 26.0 29.0 30.0 55.0 247.0 374.0 0 0
MA0144.2_shift5 (STAT3)				; oligos_6nt_mkv4_m19 versus MA0144.2 (STAT3); m=6/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.632226; -----yTKCykGGAAr--- ; cor=; Ncor= a 0 0 0 0 0 1936.0 708.0 250.0 1006.0 840.0 3692.0 1574.0 2532.0 21620.0 21620.0 9311.0 0 0 0 c 0 0 0 0 0 8571.0 0.0 346.0 19585.0 7780.0 0.0 0.0 0.0 0.0 0.0 962.0 0 0 0 g 0 0 0 0 0 3801.0 0.0 5850.0 0.0 0.0 11456.0 20046.0 18686.0 0.0 0.0 6579.0 0 0 0 t 0 0 0 0 0 7312.0 20912.0 15174.0 1029.0 13000.0 6472.0 0.0 402.0 0.0 0.0 4768.0 0 0 0
MA1625.1_rc_shift3 (Stat5b_rc)				; oligos_6nt_mkv4_m19 versus MA1625.1_rc (Stat5b_rc); m=7/16; ncol2=15; w=10; offset=-4; strand=R; shift=3; score=0.562618; ---sayTTCTgGGAAwtr- ; cor=; Ncor= a 0 0 0 600.0 852.0 533.0 21.0 85.0 17.0 76.0 425.0 467.0 39.0 2600.0 2604.0 916.0 629.0 702.0 0 c 0 0 0 729.0 542.0 711.0 50.0 86.0 2717.0 150.0 127.0 43.0 23.0 34.0 51.0 537.0 647.0 682.0 0 g 0 0 0 768.0 680.0 615.0 25.0 35.0 16.0 60.0 1746.0 2176.0 2666.0 34.0 54.0 607.0 576.0 762.0 0 t 0 0 0 663.0 686.0 901.0 2664.0 2554.0 10.0 2474.0 462.0 74.0 32.0 92.0 51.0 700.0 908.0 614.0 0
MA0137.3_shift5 (STAT1)				; oligos_6nt_mkv4_m19 versus MA0137.3 (STAT1); m=8/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.557385; -----tTTCyrGGAAa--- ; cor=; Ncor= a 0 0 0 0 0 366.0 0.0 0.0 361.0 109.0 1739.0 163.0 29.0 3620.0 3624.0 1879.0 0 0 0 c 0 0 0 0 0 731.0 52.0 6.0 3262.0 2009.0 0.0 0.0 7.0 0.0 5.0 311.0 0 0 0 g 0 0 0 0 0 785.0 0.0 110.0 6.0 0.0 1637.0 3466.0 3426.0 9.0 0.0 725.0 0 0 0 t 0 0 0 0 0 1747.0 3577.0 3513.0 0.0 1511.0 253.0 0.0 167.0 0.0 0.0 714.0 0 0 0
MA0471.2_shift4 (E2F6)				; oligos_6nt_mkv4_m19 versus MA0471.2 (E2F6); m=9/16; ncol2=13; w=10; offset=-3; strand=D; shift=4; score=0.539487; ----grrGGCGGGAArs-- ; cor=; Ncor= a 0 0 0 0 7296.0 8379.0 9537.0 2110.0 266.0 3856.0 1173.0 338.0 354.0 29337.0 25725.0 8995.0 7616.0 0 0 c 0 0 0 0 8075.0 7405.0 5102.0 1148.0 837.0 26424.0 539.0 434.0 834.0 1171.0 1595.0 7410.0 8477.0 0 0 g 0 0 0 0 12358.0 11649.0 11562.0 29387.0 31790.0 693.0 30573.0 31973.0 31614.0 2322.0 5021.0 12530.0 11405.0 0 0 t 0 0 0 0 5369.0 5665.0 6897.0 453.0 205.0 2125.0 813.0 353.0 296.0 268.0 757.0 4163.0 5600.0 0 0
MA0518.1_shift5 (Stat4)				; oligos_6nt_mkv4_m19 versus MA0518.1 (Stat4); m=10/16; ncol2=14; w=10; offset=-2; strand=D; shift=5; score=0.528507; -----yTTCyrRGAArysr ; cor=; Ncor= a 0 0 0 0 0 211.0 12.0 26.0 632.0 307.0 1450.0 733.0 45.0 2873.0 2873.0 1573.0 486.0 632.0 889.0 c 0 0 0 0 0 1019.0 2.0 0.0 2229.0 1491.0 28.0 0.0 0.0 0.0 0.0 279.0 785.0 721.0 443.0 g 0 0 0 0 0 484.0 0.0 529.0 12.0 72.0 1223.0 2134.0 2828.0 0.0 0.0 833.0 685.0 1028.0 1117.0 t 0 0 0 0 0 1159.0 2859.0 2318.0 0.0 1003.0 172.0 6.0 0.0 0.0 0.0 188.0 917.0 492.0 424.0
MA0152.1_rc_shift10 (NFATC2_rc)				; oligos_6nt_mkv4_m19 versus MA0152.1_rc (NFATC2_rc); m=11/16; ncol2=7; w=7; offset=3; strand=R; shift=10; score=0.500042; ----------TGGAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.0 0.0 0.0 26.0 24.0 21.0 20.0 0 0 c 0 0 0 0 0 0 0 0 0 0 1.0 0.0 0.0 0.0 0.0 2.0 2.0 0 0 g 0 0 0 0 0 0 0 0 0 0 3.0 26.0 25.0 0.0 1.0 2.0 1.0 0 0 t 0 0 0 0 0 0 0 0 0 0 18.0 0.0 1.0 0.0 1.0 1.0 3.0 0 0
MA1624.1_rc_shift4 (Stat5a_rc)				; oligos_6nt_mkv4_m19 versus MA1624.1_rc (Stat5a_rc); m=12/16; ncol2=12; w=9; offset=-3; strand=R; shift=4; score=0.486667; ----dtTTCTTGGAAw--- ; cor=; Ncor= a 0 0 0 0 1450.0 1066.0 73.0 87.0 32.0 103.0 598.0 369.0 41.0 4130.0 3621.0 1331.0 0 0 0 c 0 0 0 0 687.0 988.0 101.0 49.0 4441.0 980.0 137.0 28.0 26.0 144.0 207.0 1004.0 0 0 0 g 0 0 0 0 1217.0 1028.0 66.0 41.0 22.0 80.0 588.0 4046.0 4381.0 89.0 372.0 851.0 0 0 0 t 0 0 0 0 1160.0 1432.0 4274.0 4337.0 19.0 3351.0 3191.0 71.0 66.0 151.0 314.0 1328.0 0 0 0
MA1154.1_rc_shift0 (ZNF282_rc)				; oligos_6nt_mkv4_m19 versus MA1154.1_rc (ZNF282_rc); m=13/16; ncol2=17; w=10; offset=-7; strand=R; shift=0; score=0.47964; stmGTGTTrkGGGAAAg-- ; cor=; Ncor= a 51.0 43.0 129.0 2.0 7.0 3.0 2.0 61.0 126.0 21.0 2.0 1.0 0.0 380.0 387.0 378.0 45.0 0 0 c 97.0 60.0 297.0 2.0 2.0 4.0 0.0 37.0 2.0 0.0 3.0 0.0 2.0 3.0 8.0 7.0 50.0 0 0 g 98.0 40.0 0.0 210.0 44.0 210.0 0.0 3.0 132.0 99.0 205.0 208.0 209.0 2.0 0.0 21.0 196.0 0 0 t 44.0 157.0 14.0 1.0 242.0 2.0 277.0 256.0 12.0 140.0 0.0 0.0 0.0 3.0 16.0 39.0 21.0 0 0
MA0154.4_rc_shift2 (EBF1_rc)				; oligos_6nt_mkv4_m19 versus MA0154.4_rc (EBF1_rc); m=14/16; ncol2=15; w=10; offset=-5; strand=R; shift=2; score=0.478147; --wgTCCCCTGGGGAyw-- ; cor=; Ncor= a 0 0 13513.0 11042.0 2477.0 1346.0 666.0 662.0 2381.0 7250.0 2349.0 1772.0 1230.0 7519.0 33070.0 10987.0 11506.0 0 0 c 0 0 9173.0 9855.0 4957.0 32761.0 42789.0 41651.0 38728.0 1723.0 862.0 443.0 371.0 1920.0 5497.0 13481.0 10891.0 0 0 g 0 0 10836.0 13299.0 6355.0 2462.0 455.0 495.0 814.0 1707.0 39675.0 42562.0 43256.0 34665.0 4506.0 9554.0 8868.0 0 0 t 0 0 11903.0 11229.0 31636.0 8856.0 1515.0 2617.0 3502.0 34745.0 2539.0 648.0 568.0 1321.0 2352.0 11403.0 14160.0 0 0
MA1573.1_rc_shift6 (THAP11_rc)				; oligos_6nt_mkv4_m19 versus MA1573.1_rc (THAP11_rc); m=15/16; ncol2=19; w=10; offset=-1; strand=R; shift=6; score=0.446232; ------tkCTGGGAawTGT ; cor=; Ncor= a 0 0 0 0 0 0 35.0 25.0 29.0 5.0 4.0 1.0 6.0 426.0 265.0 214.0 7.0 3.0 14.0 c 0 0 0 0 0 0 85.0 89.0 365.0 58.0 2.0 1.0 1.0 5.0 47.0 33.0 34.0 1.0 10.0 g 0 0 0 0 0 0 84.0 184.0 23.0 5.0 443.0 448.0 440.0 17.0 107.0 39.0 8.0 446.0 16.0 t 0 0 0 0 0 0 247.0 153.0 34.0 383.0 2.0 1.0 4.0 3.0 32.0 165.0 402.0 1.0 411.0
MA1597.1_shift6 (ZNF528)				; oligos_6nt_mkv4_m19 versus MA1597.1 (ZNF528); m=16/16; ncol2=17; w=10; offset=-1; strand=D; shift=6; score=0.427038; ------cccAGGGAAGcCA ; cor=; Ncor= a 0 0 0 0 0 0 84.0 69.0 100.0 524.0 32.0 7.0 22.0 608.0 579.0 5.0 35.0 15.0 606.0 c 0 0 0 0 0 0 380.0 367.0 404.0 12.0 3.0 5.0 2.0 3.0 4.0 1.0 414.0 590.0 2.0 g 0 0 0 0 0 0 66.0 87.0 64.0 61.0 573.0 598.0 590.0 3.0 26.0 608.0 54.0 3.0 7.0 t 0 0 0 0 0 0 86.0 93.0 48.0 19.0 8.0 6.0 2.0 2.0 7.0 2.0 113.0 8.0 1.0

One-to-n matrix alignment; reference matrix: dyads_m34_shift7 ; 17 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m34_shift7 (dyads_m34dyads_m34)				; dyads_m34 (dyads_m34dyads_m34); m=0 (reference); ncol1=10; shift=7; ncol=19; -------gsTGGGAAgs-- ; Alignment reference a 0 0 0 0 0 0 0 1168 958 0 0 0 0 6763 6763 1508 1598 0 0 c 0 0 0 0 0 0 0 1672 2977 0 3 0 0 0 0 1576 1717 0 0 g 0 0 0 0 0 0 0 2294 1830 0 6760 6763 6763 0 0 2594 2185 0 0 t 0 0 0 0 0 0 0 1629 998 6763 0 0 0 0 0 1085 1263 0 0
MA1116.1_shift7 (RBPJ)				; dyads_m34 versus MA1116.1 (RBPJ); m=1/16; ncol2=10; w=10; offset=0; strand=D; shift=7; score=0.992585; -------bsTGGGAAmg-- ; cor=; Ncor= a 0 0 0 0 0 0 0 345.0 489.0 2.0 35.0 9.0 7.0 2369.0 2382.0 742.0 565.0 0 0 c 0 0 0 0 0 0 0 842.0 872.0 12.0 25.0 20.0 8.0 0.0 15.0 655.0 579.0 0 0 g 0 0 0 0 0 0 0 604.0 787.0 2.0 2341.0 2313.0 2309.0 4.0 1.0 592.0 711.0 0 0 t 0 0 0 0 0 0 0 611.0 254.0 2386.0 1.0 60.0 78.0 29.0 4.0 413.0 547.0 0 0
MA0606.1_rc_shift7 (NFAT5_rc)				; dyads_m34 versus MA0606.1_rc (NFAT5_rc); m=2/16; ncol2=10; w=10; offset=0; strand=R; shift=7; score=0.724761; -------wrTGGAAAat-- ; cor=; Ncor= a 0 0 0 0 0 0 0 322.0 548.0 85.0 89.0 85.0 827.0 1000.0 1000.0 649.0 210.0 0 0 c 0 0 0 0 0 0 0 248.0 41.0 0.0 85.0 0.0 0.0 0.0 0.0 88.0 210.0 0 0 g 0 0 0 0 0 0 0 163.0 287.0 84.0 826.0 915.0 84.0 0.0 0.0 88.0 210.0 0 0 t 0 0 0 0 0 0 0 268.0 124.0 831.0 0.0 0.0 89.0 0.0 0.0 176.0 371.0 0 0
MA0519.1_rc_shift6 (Stat5a::Stat5b_rc)				; dyads_m34 versus MA0519.1_rc (Stat5a::Stat5b_rc); m=3/16; ncol2=11; w=10; offset=-1; strand=R; shift=6; score=0.695262; ------TTCYkGGAAay-- ; cor=; Ncor= a 0 0 0 0 0 0 0.0 1526.0 0.0 824.0 3326.0 3449.0 166.0 14907.0 16507.0 7937.0 3584.0 0 0 c 0 0 0 0 0 0 1621.0 0.0 16507.0 4140.0 0.0 0.0 0.0 0.0 0.0 2901.0 4425.0 0 0 g 0 0 0 0 0 0 0.0 93.0 0.0 0.0 6137.0 12795.0 16341.0 1600.0 0.0 3596.0 2326.0 0 0 t 0 0 0 0 0 0 14886.0 14888.0 0.0 11543.0 7044.0 263.0 0.0 0.0 0.0 2073.0 6172.0 0 0
MA1601.1_shift6 (ZNF75D)				; dyads_m34 versus MA1601.1 (ZNF75D); m=4/16; ncol2=10; w=9; offset=-1; strand=D; shift=6; score=0.688225; ------rtGTGGGArA--- ; cor=; Ncor= a 0 0 0 0 0 0 2111.0 1057.0 2.0 10.0 26.0 46.0 24.0 6706.0 4094.0 5245.0 0 0 0 c 0 0 0 0 0 0 1573.0 715.0 0.0 59.0 18.0 44.0 29.0 20.0 576.0 256.0 0 0 0 g 0 0 0 0 0 0 1850.0 1468.0 6757.0 4.0 6710.0 6545.0 6678.0 15.0 1693.0 746.0 0 0 0 t 0 0 0 0 0 0 1225.0 3519.0 0.0 6686.0 5.0 124.0 28.0 18.0 396.0 512.0 0 0 0
MA1122.1_shift6 (TFDP1)				; dyads_m34 versus MA1122.1 (TFDP1); m=5/16; ncol2=11; w=10; offset=-1; strand=D; shift=6; score=0.648329; ------gsGCGGGAAss-- ; cor=; Ncor= a 0 0 0 0 0 0 411.0 263.0 48.0 28.0 14.0 36.0 27.0 1855.0 1645.0 465.0 381.0 0 0 c 0 0 0 0 0 0 491.0 684.0 71.0 1886.0 54.0 80.0 32.0 24.0 170.0 647.0 604.0 0 0 g 0 0 0 0 0 0 777.0 940.0 1862.0 22.0 1932.0 1865.0 1919.0 98.0 137.0 648.0 648.0 0 0 t 0 0 0 0 0 0 328.0 120.0 26.0 71.0 7.0 26.0 29.0 30.0 55.0 247.0 374.0 0 0
MA0144.2_shift5 (STAT3)				; dyads_m34 versus MA0144.2 (STAT3); m=6/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.632226; -----yTKCykGGAAr--- ; cor=; Ncor= a 0 0 0 0 0 1936.0 708.0 250.0 1006.0 840.0 3692.0 1574.0 2532.0 21620.0 21620.0 9311.0 0 0 0 c 0 0 0 0 0 8571.0 0.0 346.0 19585.0 7780.0 0.0 0.0 0.0 0.0 0.0 962.0 0 0 0 g 0 0 0 0 0 3801.0 0.0 5850.0 0.0 0.0 11456.0 20046.0 18686.0 0.0 0.0 6579.0 0 0 0 t 0 0 0 0 0 7312.0 20912.0 15174.0 1029.0 13000.0 6472.0 0.0 402.0 0.0 0.0 4768.0 0 0 0
MA1625.1_rc_shift3 (Stat5b_rc)				; dyads_m34 versus MA1625.1_rc (Stat5b_rc); m=7/16; ncol2=15; w=10; offset=-4; strand=R; shift=3; score=0.562618; ---sayTTCTgGGAAwtr- ; cor=; Ncor= a 0 0 0 600.0 852.0 533.0 21.0 85.0 17.0 76.0 425.0 467.0 39.0 2600.0 2604.0 916.0 629.0 702.0 0 c 0 0 0 729.0 542.0 711.0 50.0 86.0 2717.0 150.0 127.0 43.0 23.0 34.0 51.0 537.0 647.0 682.0 0 g 0 0 0 768.0 680.0 615.0 25.0 35.0 16.0 60.0 1746.0 2176.0 2666.0 34.0 54.0 607.0 576.0 762.0 0 t 0 0 0 663.0 686.0 901.0 2664.0 2554.0 10.0 2474.0 462.0 74.0 32.0 92.0 51.0 700.0 908.0 614.0 0
MA0137.3_shift5 (STAT1)				; dyads_m34 versus MA0137.3 (STAT1); m=8/16; ncol2=11; w=9; offset=-2; strand=D; shift=5; score=0.557385; -----tTTCyrGGAAa--- ; cor=; Ncor= a 0 0 0 0 0 366.0 0.0 0.0 361.0 109.0 1739.0 163.0 29.0 3620.0 3624.0 1879.0 0 0 0 c 0 0 0 0 0 731.0 52.0 6.0 3262.0 2009.0 0.0 0.0 7.0 0.0 5.0 311.0 0 0 0 g 0 0 0 0 0 785.0 0.0 110.0 6.0 0.0 1637.0 3466.0 3426.0 9.0 0.0 725.0 0 0 0 t 0 0 0 0 0 1747.0 3577.0 3513.0 0.0 1511.0 253.0 0.0 167.0 0.0 0.0 714.0 0 0 0
MA0471.2_shift4 (E2F6)				; dyads_m34 versus MA0471.2 (E2F6); m=9/16; ncol2=13; w=10; offset=-3; strand=D; shift=4; score=0.539487; ----grrGGCGGGAArs-- ; cor=; Ncor= a 0 0 0 0 7296.0 8379.0 9537.0 2110.0 266.0 3856.0 1173.0 338.0 354.0 29337.0 25725.0 8995.0 7616.0 0 0 c 0 0 0 0 8075.0 7405.0 5102.0 1148.0 837.0 26424.0 539.0 434.0 834.0 1171.0 1595.0 7410.0 8477.0 0 0 g 0 0 0 0 12358.0 11649.0 11562.0 29387.0 31790.0 693.0 30573.0 31973.0 31614.0 2322.0 5021.0 12530.0 11405.0 0 0 t 0 0 0 0 5369.0 5665.0 6897.0 453.0 205.0 2125.0 813.0 353.0 296.0 268.0 757.0 4163.0 5600.0 0 0
MA0518.1_shift5 (Stat4)				; dyads_m34 versus MA0518.1 (Stat4); m=10/16; ncol2=14; w=10; offset=-2; strand=D; shift=5; score=0.528507; -----yTTCyrRGAArysr ; cor=; Ncor= a 0 0 0 0 0 211.0 12.0 26.0 632.0 307.0 1450.0 733.0 45.0 2873.0 2873.0 1573.0 486.0 632.0 889.0 c 0 0 0 0 0 1019.0 2.0 0.0 2229.0 1491.0 28.0 0.0 0.0 0.0 0.0 279.0 785.0 721.0 443.0 g 0 0 0 0 0 484.0 0.0 529.0 12.0 72.0 1223.0 2134.0 2828.0 0.0 0.0 833.0 685.0 1028.0 1117.0 t 0 0 0 0 0 1159.0 2859.0 2318.0 0.0 1003.0 172.0 6.0 0.0 0.0 0.0 188.0 917.0 492.0 424.0
MA0152.1_rc_shift10 (NFATC2_rc)				; dyads_m34 versus MA0152.1_rc (NFATC2_rc); m=11/16; ncol2=7; w=7; offset=3; strand=R; shift=10; score=0.500042; ----------TGGAAAA-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 4.0 0.0 0.0 26.0 24.0 21.0 20.0 0 0 c 0 0 0 0 0 0 0 0 0 0 1.0 0.0 0.0 0.0 0.0 2.0 2.0 0 0 g 0 0 0 0 0 0 0 0 0 0 3.0 26.0 25.0 0.0 1.0 2.0 1.0 0 0 t 0 0 0 0 0 0 0 0 0 0 18.0 0.0 1.0 0.0 1.0 1.0 3.0 0 0
MA1624.1_rc_shift4 (Stat5a_rc)				; dyads_m34 versus MA1624.1_rc (Stat5a_rc); m=12/16; ncol2=12; w=9; offset=-3; strand=R; shift=4; score=0.486667; ----dtTTCTTGGAAw--- ; cor=; Ncor= a 0 0 0 0 1450.0 1066.0 73.0 87.0 32.0 103.0 598.0 369.0 41.0 4130.0 3621.0 1331.0 0 0 0 c 0 0 0 0 687.0 988.0 101.0 49.0 4441.0 980.0 137.0 28.0 26.0 144.0 207.0 1004.0 0 0 0 g 0 0 0 0 1217.0 1028.0 66.0 41.0 22.0 80.0 588.0 4046.0 4381.0 89.0 372.0 851.0 0 0 0 t 0 0 0 0 1160.0 1432.0 4274.0 4337.0 19.0 3351.0 3191.0 71.0 66.0 151.0 314.0 1328.0 0 0 0
MA1154.1_rc_shift0 (ZNF282_rc)				; dyads_m34 versus MA1154.1_rc (ZNF282_rc); m=13/16; ncol2=17; w=10; offset=-7; strand=R; shift=0; score=0.47964; stmGTGTTrkGGGAAAg-- ; cor=; Ncor= a 51.0 43.0 129.0 2.0 7.0 3.0 2.0 61.0 126.0 21.0 2.0 1.0 0.0 380.0 387.0 378.0 45.0 0 0 c 97.0 60.0 297.0 2.0 2.0 4.0 0.0 37.0 2.0 0.0 3.0 0.0 2.0 3.0 8.0 7.0 50.0 0 0 g 98.0 40.0 0.0 210.0 44.0 210.0 0.0 3.0 132.0 99.0 205.0 208.0 209.0 2.0 0.0 21.0 196.0 0 0 t 44.0 157.0 14.0 1.0 242.0 2.0 277.0 256.0 12.0 140.0 0.0 0.0 0.0 3.0 16.0 39.0 21.0 0 0
MA0154.4_rc_shift2 (EBF1_rc)				; dyads_m34 versus MA0154.4_rc (EBF1_rc); m=14/16; ncol2=15; w=10; offset=-5; strand=R; shift=2; score=0.478147; --wgTCCCCTGGGGAyw-- ; cor=; Ncor= a 0 0 13513.0 11042.0 2477.0 1346.0 666.0 662.0 2381.0 7250.0 2349.0 1772.0 1230.0 7519.0 33070.0 10987.0 11506.0 0 0 c 0 0 9173.0 9855.0 4957.0 32761.0 42789.0 41651.0 38728.0 1723.0 862.0 443.0 371.0 1920.0 5497.0 13481.0 10891.0 0 0 g 0 0 10836.0 13299.0 6355.0 2462.0 455.0 495.0 814.0 1707.0 39675.0 42562.0 43256.0 34665.0 4506.0 9554.0 8868.0 0 0 t 0 0 11903.0 11229.0 31636.0 8856.0 1515.0 2617.0 3502.0 34745.0 2539.0 648.0 568.0 1321.0 2352.0 11403.0 14160.0 0 0
MA1573.1_rc_shift6 (THAP11_rc)				; dyads_m34 versus MA1573.1_rc (THAP11_rc); m=15/16; ncol2=19; w=10; offset=-1; strand=R; shift=6; score=0.446232; ------tkCTGGGAawTGT ; cor=; Ncor= a 0 0 0 0 0 0 35.0 25.0 29.0 5.0 4.0 1.0 6.0 426.0 265.0 214.0 7.0 3.0 14.0 c 0 0 0 0 0 0 85.0 89.0 365.0 58.0 2.0 1.0 1.0 5.0 47.0 33.0 34.0 1.0 10.0 g 0 0 0 0 0 0 84.0 184.0 23.0 5.0 443.0 448.0 440.0 17.0 107.0 39.0 8.0 446.0 16.0 t 0 0 0 0 0 0 247.0 153.0 34.0 383.0 2.0 1.0 4.0 3.0 32.0 165.0 402.0 1.0 411.0
MA1597.1_shift6 (ZNF528)				; dyads_m34 versus MA1597.1 (ZNF528); m=16/16; ncol2=17; w=10; offset=-1; strand=D; shift=6; score=0.427038; ------cccAGGGAAGcCA ; cor=; Ncor= a 0 0 0 0 0 0 84.0 69.0 100.0 524.0 32.0 7.0 22.0 608.0 579.0 5.0 35.0 15.0 606.0 c 0 0 0 0 0 0 380.0 367.0 404.0 12.0 3.0 5.0 2.0 3.0 4.0 1.0 414.0 590.0 2.0 g 0 0 0 0 0 0 66.0 87.0 64.0 61.0 573.0 598.0 590.0 3.0 26.0 608.0 54.0 3.0 7.0 t 0 0 0 0 0 0 86.0 93.0 48.0 19.0 8.0 6.0 2.0 2.0 7.0 2.0 113.0 8.0 1.0

One-to-n matrix alignment; reference matrix: dyads_m37_shift5 ; 24 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m37_shift5 (dyads_m37dyads_m37)				; dyads_m37 (dyads_m37dyads_m37); m=0 (reference); ncol1=10; shift=5; ncol=20; -----gsAGGAAGsv----- ; Alignment reference a 0 0 0 0 0 1977 1512 7991 0 0 7991 7991 0 1644 2234 0 0 0 0 0 c 0 0 0 0 0 1759 3305 0 0 0 0 0 0 2496 2142 0 0 0 0 0 g 0 0 0 0 0 2904 2426 0 7991 7991 0 0 7991 2494 2391 0 0 0 0 0 t 0 0 0 0 0 1351 748 0 0 0 0 0 0 1357 1224 0 0 0 0 0
MA0764.2_shift5 (ETV4)				; dyads_m37 versus MA0764.2 (ETV4); m=1/23; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.988846; -----rcAGGAAGyr----- ; cor=; Ncor= a 0 0 0 0 0 3119.0 1206.0 8353.0 0.0 1.0 8374.0 8333.0 11.0 1296.0 2336.0 0 0 0 0 0 c 0 0 0 0 0 1494.0 4608.0 61.0 92.0 1.0 0.0 73.0 28.0 2194.0 1597.0 0 0 0 0 0 g 0 0 0 0 0 2721.0 1936.0 0.0 8308.0 8345.0 0.0 0.0 8344.0 1949.0 3055.0 0 0 0 0 0 t 0 0 0 0 0 1080.0 664.0 0.0 14.0 67.0 40.0 8.0 31.0 2975.0 1426.0 0 0 0 0 0
MA0645.1_shift5 (ETV6)				; dyads_m37 versus MA0645.1 (ETV6); m=2/23; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.771065; -----msCGGAAGTr----- ; cor=; Ncor= a 0 0 0 0 0 9414.0 342.0 1476.0 7.0 21.0 6687.0 6687.0 768.0 184.0 2049.0 0 0 0 0 0 c 0 0 0 0 0 6562.0 2394.0 6379.0 0.0 0.0 0.0 13.0 52.0 834.0 342.0 0 0 0 0 0 g 0 0 0 0 0 4684.0 4292.0 397.0 6687.0 6687.0 7.0 32.0 6687.0 233.0 3205.0 0 0 0 0 0 t 0 0 0 0 0 2002.0 441.0 308.0 13.0 22.0 0.0 41.0 0.0 6687.0 1091.0 0 0 0 0 0
MA0136.2_shift4 (ELF5)				; dyads_m37 versus MA0136.2 (ELF5); m=3/23; ncol2=11; w=10; offset=-1; strand=D; shift=4; score=0.766342; ----acsmGGAAGtr----- ; cor=; Ncor= a 0 0 0 0 2416.0 1221.0 987.0 1458.0 3.0 5.0 2699.0 2646.0 890.0 477.0 959.0 0 0 0 0 0 c 0 0 0 0 252.0 2298.0 2453.0 2528.0 0.0 0.0 11.0 61.0 155.0 716.0 371.0 0 0 0 0 0 g 0 0 0 0 301.0 955.0 1266.0 309.0 3307.0 3315.0 1.0 0.0 2857.0 312.0 762.0 0 0 0 0 0 t 0 0 0 0 793.0 866.0 97.0 56.0 20.0 25.0 4.0 245.0 84.0 2470.0 663.0 0 0 0 0 0
MA0765.2_rc_shift5 (ETV5_rc)				; dyads_m37 versus MA0765.2_rc (ETV5_rc); m=4/23; ncol2=11; w=10; offset=0; strand=R; shift=5; score=0.729585; -----rsCGGAAGTgv---- ; cor=; Ncor= a 0 0 0 0 0 7222.0 4436.0 4523.0 392.0 255.0 24324.0 23722.0 971.0 1448.0 5100.0 6667.0 0 0 0 0 c 0 0 0 0 0 6039.0 11944.0 18757.0 498.0 336.0 816.0 408.0 994.0 3017.0 6129.0 7117.0 0 0 0 0 g 0 0 0 0 0 8378.0 6921.0 1743.0 25061.0 25484.0 956.0 1145.0 24041.0 2443.0 10307.0 8003.0 0 0 0 0 t 0 0 0 0 0 4679.0 3017.0 1295.0 367.0 243.0 222.0 1043.0 312.0 19410.0 4782.0 4531.0 0 0 0 0
MA0076.2_rc_shift5 (ELK4_rc)				; dyads_m37 versus MA0076.2_rc (ELK4_rc); m=5/23; ncol2=11; w=10; offset=0; strand=R; shift=5; score=0.699552; -----rCCGGAAGygs---- ; cor=; Ncor= a 0 0 0 0 0 1216.0 83.0 512.0 0.0 0.0 3427.0 3419.0 723.0 210.0 561.0 785.0 0 0 0 0 c 0 0 0 0 0 668.0 2843.0 2915.0 0.0 0.0 0.0 0.0 16.0 1038.0 570.0 886.0 0 0 0 0 g 0 0 0 0 0 1253.0 501.0 0.0 3427.0 3427.0 0.0 0.0 2688.0 145.0 1905.0 1458.0 0 0 0 0 t 0 0 0 0 0 290.0 0.0 0.0 0.0 0.0 0.0 8.0 0.0 2034.0 391.0 298.0 0 0 0 0
MA0640.2_rc_shift4 (ELF3_rc)				; dyads_m37 versus MA0640.2_rc (ELF3_rc); m=6/23; ncol2=14; w=10; offset=-1; strand=R; shift=4; score=0.649371; ----avcAGGAAGTggrr-- ; cor=; Ncor= a 0 0 0 0 22757.0 12256.0 8528.0 44422.0 475.0 793.0 46173.0 45195.0 4633.0 3204.0 9951.0 11157.0 13593.0 13889.0 0 0 c 0 0 0 0 6001.0 13945.0 28319.0 1989.0 473.0 566.0 954.0 768.0 1365.0 2615.0 4122.0 6930.0 11894.0 10255.0 0 0 g 0 0 0 0 9085.0 13291.0 9278.0 1315.0 47107.0 46481.0 943.0 1368.0 41950.0 2040.0 27973.0 24731.0 13181.0 12661.0 0 0 t 0 0 0 0 10659.0 9010.0 2377.0 776.0 447.0 662.0 432.0 1171.0 554.0 40643.0 6456.0 5684.0 9834.0 11697.0 0 0
MA0508.3_rc_shift4 (PRDM1_rc)				; dyads_m37 versus MA0508.3_rc (PRDM1_rc); m=7/23; ncol2=11; w=10; offset=-1; strand=R; shift=4; score=0.639298; ----raGAGAAAGwr----- ; cor=; Ncor= a 0 0 0 0 19978.0 27294.0 660.0 49466.0 432.0 52619.0 50943.0 52905.0 829.0 17272.0 22293.0 0 0 0 0 0 c 0 0 0 0 7861.0 4098.0 290.0 1390.0 207.0 561.0 1011.0 826.0 701.0 8768.0 6638.0 0 0 0 0 0 g 0 0 0 0 17518.0 13567.0 52821.0 1076.0 53465.0 488.0 1346.0 467.0 52752.0 12288.0 17788.0 0 0 0 0 0 t 0 0 0 0 10124.0 10522.0 1710.0 3549.0 1377.0 1813.0 2181.0 1283.0 1199.0 17153.0 8762.0 0 0 0 0 0
MA0761.2_shift3 (ETV1)				; dyads_m37 versus MA0761.2 (ETV1); m=8/23; ncol2=14; w=10; offset=-2; strand=D; shift=3; score=0.635439; ---rraCAGGAAGTgrr--- ; cor=; Ncor= a 0 0 0 12622.0 11359.0 22801.0 1848.0 33305.0 231.0 378.0 36130.0 33368.0 4235.0 3343.0 7922.0 11678.0 9861.0 0 0 0 c 0 0 0 7468.0 8638.0 4339.0 32139.0 3064.0 275.0 271.0 471.0 486.0 1307.0 3889.0 5060.0 7475.0 9114.0 0 0 0 g 0 0 0 9643.0 10407.0 6015.0 2389.0 573.0 36483.0 36121.0 375.0 412.0 31256.0 3146.0 18967.0 10820.0 9698.0 0 0 0 t 0 0 0 7606.0 6935.0 4184.0 963.0 397.0 350.0 569.0 363.0 3073.0 541.0 26961.0 5390.0 7366.0 8666.0 0 0 0
MA0473.3_shift3 (ELF1)				; dyads_m37 versus MA0473.3 (ELF1); m=9/23; ncol2=14; w=10; offset=-2; strand=D; shift=3; score=0.626882; ---aamCAGGAAGTGrv--- ; cor=; Ncor= a 0 0 0 18678.0 18648.0 17440.0 3094.0 42164.0 320.0 649.0 45930.0 45243.0 4063.0 3009.0 5688.0 12561.0 12020.0 0 0 0 c 0 0 0 8627.0 7834.0 12699.0 37923.0 4038.0 421.0 505.0 796.0 705.0 1570.0 1993.0 4236.0 11843.0 12681.0 0 0 0 g 0 0 0 11540.0 11305.0 10440.0 4819.0 932.0 46642.0 45970.0 676.0 779.0 41738.0 2007.0 34757.0 16920.0 13472.0 0 0 0 t 0 0 0 8925.0 9983.0 7191.0 1934.0 636.0 387.0 646.0 368.0 1043.0 399.0 40761.0 3089.0 6446.0 9597.0 0 0 0
MA0062.3_rc_shift3 (GABPA_rc)				; dyads_m37 versus MA0062.3_rc (GABPA_rc); m=10/23; ncol2=14; w=10; offset=-2; strand=R; shift=3; score=0.625418; ---rraCAGGAAGTgrr--- ; cor=; Ncor= a 0 0 0 21388.0 20341.0 40409.0 5012.0 57654.0 859.0 1558.0 61754.0 59186.0 6717.0 4358.0 9453.0 19068.0 16725.0 0 0 0 c 0 0 0 13187.0 15081.0 7720.0 51920.0 4561.0 520.0 1150.0 1633.0 965.0 2169.0 4873.0 6989.0 13751.0 15945.0 0 0 0 g 0 0 0 17382.0 18154.0 12006.0 6328.0 1542.0 63107.0 61373.0 1230.0 1443.0 55664.0 3988.0 41398.0 21679.0 16922.0 0 0 0 t 0 0 0 13522.0 11903.0 5344.0 2219.0 1722.0 993.0 1398.0 862.0 3885.0 929.0 52260.0 7639.0 10981.0 15887.0 0 0 0
MA1508.1_shift2 (IKZF1)				; dyads_m37 versus MA1508.1 (IKZF1); m=11/23; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.601735; --rrAACAGGAAry------ ; cor=; Ncor= a 0 0 3295.0 4187.0 8122.0 9137.0 673.0 10194.0 125.0 418.0 10323.0 10254.0 3300.0 2221.0 0 0 0 0 0 0 c 0 0 2055.0 2292.0 1158.0 473.0 8678.0 212.0 106.0 178.0 247.0 114.0 1675.0 2991.0 0 0 0 0 0 0 g 0 0 3873.0 2868.0 1007.0 956.0 1272.0 252.0 10569.0 10185.0 297.0 261.0 4919.0 2317.0 0 0 0 0 0 0 t 0 0 1695.0 1571.0 631.0 352.0 295.0 260.0 118.0 137.0 51.0 289.0 1024.0 3389.0 0 0 0 0 0 0
MA0750.2_shift4 (ZBTB7A)				; dyads_m37 versus MA0750.2 (ZBTB7A); m=12/23; ncol2=13; w=10; offset=-1; strand=D; shift=4; score=0.601203; ----rsCCGGAAGtgss--- ; cor=; Ncor= a 0 0 0 0 4136.0 2783.0 477.0 2490.0 173.0 114.0 13854.0 13719.0 629.0 1141.0 1744.0 2709.0 2850.0 0 0 0 c 0 0 0 0 3512.0 5356.0 12469.0 11293.0 210.0 163.0 274.0 343.0 711.0 3433.0 2485.0 4386.0 4856.0 0 0 0 g 0 0 0 0 4167.0 4397.0 1496.0 624.0 14130.0 14239.0 335.0 261.0 13112.0 1623.0 9142.0 5862.0 4669.0 0 0 0 t 0 0 0 0 2826.0 2105.0 199.0 234.0 128.0 125.0 178.0 318.0 189.0 8444.0 1270.0 1684.0 2266.0 0 0 0
MA0598.3_rc_shift2 (EHF_rc)				; dyads_m37 versus MA0598.3_rc (EHF_rc); m=13/23; ncol2=15; w=10; offset=-3; strand=R; shift=2; score=0.595711; --raaacAGGAAGTgrs--- ; cor=; Ncor= a 0 0 4262.0 5393.0 10095.0 6725.0 2629.0 12794.0 112.0 201.0 14865.0 14622.0 1706.0 723.0 2827.0 4683.0 3665.0 0 0 0 c 0 0 3194.0 3088.0 1264.0 3299.0 9061.0 1538.0 101.0 139.0 199.0 152.0 377.0 775.0 1540.0 3355.0 4102.0 0 0 0 g 0 0 4829.0 3671.0 1762.0 3029.0 2983.0 608.0 14997.0 14833.0 164.0 167.0 13116.0 456.0 8887.0 4628.0 4341.0 0 0 0 t 0 0 3083.0 3216.0 2247.0 2315.0 695.0 428.0 158.0 195.0 140.0 427.0 169.0 13414.0 2114.0 2702.0 3260.0 0 0 0
MA0687.1_shift1 (SPIC)				; dyads_m37 versus MA0687.1 (SPIC); m=14/23; ncol2=14; w=10; offset=-4; strand=D; shift=1; score=0.573594; -aaAAWsmGGAAGTa----- ; cor=; Ncor= a 0 144.0 162.0 186.0 194.0 171.0 30.0 88.0 0.0 13.0 204.0 192.0 13.0 45.0 115.0 0 0 0 0 0 c 0 83.0 31.0 25.0 9.0 0.0 75.0 59.0 8.0 0.0 7.0 31.0 0.0 24.0 36.0 0 0 0 0 0 g 0 68.0 70.0 13.0 0.0 0.0 181.0 48.0 217.0 232.0 0.0 13.0 231.0 17.0 9.0 0 0 0 0 0 t 0 72.0 40.0 18.0 4.0 75.0 13.0 0.0 3.0 26.0 16.0 8.0 0.0 194.0 19.0 0 0 0 0 0
MA0518.1_shift2 (Stat4)				; dyads_m37 versus MA0518.1 (Stat4); m=15/23; ncol2=14; w=10; offset=-3; strand=D; shift=2; score=0.539182; --yTTCyrRGAArysr---- ; cor=; Ncor= a 0 0 211.0 12.0 26.0 632.0 307.0 1450.0 733.0 45.0 2873.0 2873.0 1573.0 486.0 632.0 889.0 0 0 0 0 c 0 0 1019.0 2.0 0.0 2229.0 1491.0 28.0 0.0 0.0 0.0 0.0 279.0 785.0 721.0 443.0 0 0 0 0 g 0 0 484.0 0.0 529.0 12.0 72.0 1223.0 2134.0 2828.0 0.0 0.0 833.0 685.0 1028.0 1117.0 0 0 0 0 t 0 0 1159.0 2859.0 2318.0 0.0 1003.0 172.0 6.0 0.0 0.0 0.0 188.0 917.0 492.0 424.0 0 0 0 0
MA0520.1_rc_shift0 (Stat6_rc)				; dyads_m37 versus MA0520.1_rc (Stat6_rc); m=16/23; ncol2=15; w=10; offset=-5; strand=R; shift=0; score=0.524581; rkTTCtswrGAArws----- ; cor=; Ncor= a 782.0 293.0 0.0 0.0 30.0 280.0 92.0 948.0 578.0 50.0 1839.0 1852.0 698.0 487.0 450.0 0 0 0 0 0 c 235.0 398.0 3.0 0.0 1796.0 416.0 898.0 219.0 0.0 0.0 0.0 0.0 436.0 372.0 482.0 0 0 0 0 0 g 490.0 540.0 0.0 0.0 0.0 3.0 534.0 21.0 1204.0 1680.0 0.0 0.0 566.0 328.0 663.0 0 0 0 0 0 t 345.0 621.0 1849.0 1852.0 26.0 1153.0 328.0 664.0 70.0 122.0 13.0 0.0 152.0 665.0 257.0 0 0 0 0 0
MA1652.1_shift5 (ZKSCAN5)				; dyads_m37 versus MA1652.1 (ZKSCAN5); m=17/23; ncol2=14; w=10; offset=0; strand=D; shift=5; score=0.514333; -----rgaGGArGTGAgrr- ; cor=; Ncor= a 0 0 0 0 0 870.0 822.0 1510.0 136.0 38.0 3199.0 1446.0 92.0 73.0 43.0 3199.0 375.0 1268.0 1169.0 0 c 0 0 0 0 0 636.0 704.0 315.0 30.0 27.0 62.0 27.0 37.0 86.0 24.0 41.0 370.0 504.0 569.0 0 g 0 0 0 0 0 1161.0 1197.0 801.0 3111.0 3236.0 47.0 1827.0 3149.0 76.0 3251.0 62.0 2034.0 1078.0 1052.0 0 t 0 0 0 0 0 660.0 604.0 701.0 50.0 26.0 19.0 27.0 49.0 3092.0 9.0 25.0 548.0 477.0 537.0 0
MA0081.2_rc_shift2 (SPIB_rc)				; dyads_m37 versus MA0081.2_rc (SPIB_rc); m=18/23; ncol2=16; w=10; offset=-3; strand=R; shift=2; score=0.504822; --raaaGAGGAAGTGara-- ; cor=; Ncor= a 0 0 10150.0 14333.0 16580.0 17264.0 3481.0 19719.0 1034.0 426.0 26297.0 26087.0 1445.0 1323.0 859.0 15129.0 9411.0 11760.0 0 0 c 0 0 4165.0 2409.0 2087.0 781.0 2316.0 1829.0 129.0 153.0 243.0 157.0 2516.0 669.0 1721.0 3193.0 4544.0 4026.0 0 0 g 0 0 8589.0 6029.0 5425.0 3922.0 20113.0 4517.0 25492.0 26145.0 200.0 236.0 22730.0 619.0 23971.0 6429.0 8293.0 5797.0 0 0 t 0 0 4026.0 4159.0 2838.0 4963.0 1020.0 865.0 275.0 206.0 190.0 450.0 239.0 24319.0 379.0 2179.0 4682.0 5347.0 0 0
MA0137.3_shift2 (STAT1)				; dyads_m37 versus MA0137.3 (STAT1); m=19/23; ncol2=11; w=8; offset=-3; strand=D; shift=2; score=0.447787; --tTTCyrGGAAa------- ; cor=; Ncor= a 0 0 366.0 0.0 0.0 361.0 109.0 1739.0 163.0 29.0 3620.0 3624.0 1879.0 0 0 0 0 0 0 0 c 0 0 731.0 52.0 6.0 3262.0 2009.0 0.0 0.0 7.0 0.0 5.0 311.0 0 0 0 0 0 0 0 g 0 0 785.0 0.0 110.0 6.0 0.0 1637.0 3466.0 3426.0 9.0 0.0 725.0 0 0 0 0 0 0 0 t 0 0 1747.0 3577.0 3513.0 0.0 1511.0 253.0 0.0 167.0 0.0 0.0 714.0 0 0 0 0 0 0 0
MA0149.1_shift4 (EWSR1-FLI1)				; dyads_m37 versus MA0149.1 (EWSR1-FLI1); m=20/23; ncol2=18; w=10; offset=-1; strand=D; shift=4; score=0.441088; ----GGAAGGAAGGAAGGAA ; cor=; Ncor= a 0 0 0 0 0.0 2.0 104.0 104.0 1.0 2.0 103.0 102.0 0.0 0.0 99.0 105.0 0.0 0.0 100.0 102.0 c 0 0 0 0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.0 4.0 0.0 0.0 2.0 3.0 0.0 g 0 0 0 0 105.0 103.0 1.0 1.0 104.0 102.0 2.0 3.0 104.0 103.0 2.0 0.0 105.0 103.0 0.0 2.0 t 0 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 0.0 2.0 1.0
MA0080.5_shift0 (SPI1)				; dyads_m37 versus MA0080.5 (SPI1); m=21/23; ncol2=20; w=10; offset=-5; strand=D; shift=0; score=0.415197; rrraaAGAGGAAGTGAaarw ; cor=; Ncor= a 42201.0 48240.0 54154.0 78831.0 81904.0 99739.0 15301.0 113087.0 5230.0 3323.0 129177.0 127888.0 11279.0 13931.0 11028.0 90925.0 60831.0 59460.0 39411.0 42838.0 c 22587.0 21262.0 20183.0 11424.0 12269.0 2914.0 10958.0 3425.0 568.0 954.0 1339.0 792.0 9931.0 3717.0 12697.0 11316.0 20113.0 16927.0 26246.0 24884.0 g 38405.0 34277.0 37341.0 25893.0 25580.0 13479.0 100825.0 12544.0 125703.0 127639.0 1407.0 1308.0 109802.0 7231.0 103485.0 20647.0 30577.0 29188.0 34829.0 28335.0 t 30010.0 29424.0 21525.0 17055.0 13450.0 17071.0 6119.0 4147.0 1702.0 1287.0 1280.0 3215.0 2191.0 108324.0 5993.0 10315.0 21682.0 27628.0 32717.0 37146.0
MA0101.1_rc_shift8 (REL_rc)				; dyads_m37 versus MA0101.1_rc (REL_rc); m=22/23; ncol2=10; w=7; offset=3; strand=R; shift=8; score=0.409942; --------GGAAwkyCCs-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.0 2.0 15.0 16.0 10.0 3.0 2.0 1.0 1.0 4.0 0 0 c 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 1.0 3.0 9.0 15.0 15.0 8.0 0 0 g 0 0 0 0 0 0 0 0 16.0 15.0 0.0 0.0 1.0 5.0 1.0 0.0 1.0 5.0 0 0 t 0 0 0 0 0 0 0 0 1.0 0.0 2.0 1.0 5.0 6.0 5.0 1.0 0.0 0.0 0 0
MA0528.2_shift1 (ZNF263)				; dyads_m37 versus MA0528.2 (ZNF263); m=23/23; ncol2=12; w=8; offset=-4; strand=D; shift=1; score=0.407843; -gsgGGGAGGAsg------- ; cor=; Ncor= a 0 13287.0 11016.0 13001.0 1610.0 789.0 950.0 53900.0 830.0 695.0 52499.0 9539.0 8436.0 0 0 0 0 0 0 0 c 0 13040.0 14909.0 6183.0 1659.0 1544.0 972.0 1660.0 966.0 2190.0 1758.0 15413.0 11689.0 0 0 0 0 0 0 0 g 0 20283.0 17883.0 28912.0 51804.0 52818.0 53435.0 163.0 52875.0 52741.0 1448.0 24825.0 25115.0 0 0 0 0 0 0 0 t 0 9733.0 12535.0 8247.0 1270.0 1192.0 986.0 620.0 1672.0 717.0 638.0 6566.0 11103.0 0 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m42_shift1 ; 41 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m42_shift1 (oligos_6nt_mkv4_m42oligos_6nt_mkv4_m42)				; oligos_6nt_mkv4_m42 (oligos_6nt_mkv4_m42oligos_6nt_mkv4_m42); m=0 (reference); ncol1=13; shift=1; ncol=14; -sgGCACCTGCCcc ; Alignment reference a 0 928 1315 469 23 5085 21 27 11 26 112 188 1249 786 c 0 1992 1265 801 5202 53 5135 5155 101 60 4176 4056 1689 1983 g 0 1322 1409 3767 24 127 92 68 70 5156 332 153 1211 1276 t 0 1040 1293 245 33 17 34 32 5100 40 662 885 1133 1237
MA1631.1_shift1 (ASCL1(var.2))				; oligos_6nt_mkv4_m42 versus MA1631.1 (ASCL1(var.2)); m=1/40; ncol2=13; w=13; offset=0; strand=D; shift=1; score=0.986871; -cdgCACCTGCysc ; cor=; Ncor= a 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 c 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 g 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 t 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0
MA0830.2_shift1 (TCF4)				; oligos_6nt_mkv4_m42 versus MA0830.2 (TCF4); m=2/40; ncol2=13; w=13; offset=0; strand=D; shift=1; score=0.982125; -cggCACCTGccss ; cor=; Ncor= a 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 c 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 g 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 t 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0
MA0745.2_shift1 (SNAI2)				; oligos_6nt_mkv4_m42 versus MA0745.2 (SNAI2); m=3/40; ncol2=13; w=13; offset=0; strand=D; shift=1; score=0.879551; -aygCACCTGTmry ; cor=; Ncor= a 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 c 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 g 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 t 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0
MA0499.2_shift1 (MYOD1)				; oligos_6nt_mkv4_m42 versus MA0499.2 (MYOD1); m=4/40; ncol2=13; w=13; offset=0; strand=D; shift=1; score=0.87647; -cwgCACCTGTymy ; cor=; Ncor= a 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 c 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 g 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 t 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0
MA1648.1_shift2 (TCF12(var.2))				; oligos_6nt_mkv4_m42 versus MA1648.1 (TCF12(var.2)); m=5/40; ncol2=11; w=11; offset=1; strand=D; shift=2; score=0.795477; --ssCACCTGCys- ; cor=; Ncor= a 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 c 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 g 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 t 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0
MA0522.3_shift2 (TCF3)				; oligos_6nt_mkv4_m42 versus MA0522.3 (TCF3); m=6/40; ncol2=11; w=11; offset=1; strand=D; shift=2; score=0.793279; --svCACCTGCss- ; cor=; Ncor= a 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 c 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 g 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 t 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0
MA1621.1_shift0 (Rbpjl)				; oligos_6nt_mkv4_m42 versus MA1621.1 (Rbpjl); m=7/40; ncol2=14; w=13; offset=-1; strand=D; shift=0; score=0.781741; svmaCACCTGtsyc ; cor=; Ncor= a 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 c 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 g 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 t 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0
MA0103.3_shift2 (ZEB1)				; oligos_6nt_mkv4_m42 versus MA0103.3 (ZEB1); m=8/40; ncol2=11; w=11; offset=1; strand=D; shift=2; score=0.778182; --ssCACCTGsss- ; cor=; Ncor= a 0 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 c 0 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 g 0 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 t 0 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0
MA1620.1_shift1 (Ptf1a(var.3))				; oligos_6nt_mkv4_m42 versus MA1620.1 (Ptf1a(var.3)); m=9/40; ncol2=12; w=12; offset=0; strand=D; shift=1; score=0.751028; -rmaCACCTGtky- ; cor=; Ncor= a 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 c 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 g 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 t 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0
MA1558.1_rc_shift2 (SNAI1_rc)				; oligos_6nt_mkv4_m42 versus MA1558.1_rc (SNAI1_rc); m=10/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.725458; --yrCACCTGyh-- ; cor=; Ncor= a 0 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 c 0 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 g 0 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 t 0 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0
MA0822.1_shift1 (HES7)				; oligos_6nt_mkv4_m42 versus MA0822.1 (HES7); m=11/40; ncol2=12; w=12; offset=0; strand=D; shift=1; score=0.70821; -yGGCACGTGCCr- ; cor=; Ncor= a 0 168.0 24.0 160.0 1.0 1864.0 0.0 4.0 3.0 2.0 8.0 0.0 946.0 0 c 0 790.0 19.0 29.0 1864.0 3.0 1864.0 1.0 3.0 1.0 1864.0 1864.0 47.0 0 g 0 43.0 1864.0 1864.0 0.0 7.0 0.0 1864.0 1.0 1864.0 5.0 9.0 734.0 0 t 0 863.0 3.0 2.0 3.0 0.0 0.0 1.0 1864.0 0.0 93.0 9.0 137.0 0
MA0821.1_shift1 (HES5)				; oligos_6nt_mkv4_m42 versus MA0821.1 (HES5); m=12/40; ncol2=12; w=12; offset=0; strand=D; shift=1; score= 0.7069; -yGrCACGTGCCr- ; cor=; Ncor= a 0 216.0 47.0 764.0 0.0 1559.0 1.0 1.0 0.0 0.0 0.0 0.0 651.0 0 c 0 779.0 6.0 63.0 1559.0 0.0 1559.0 0.0 7.0 0.0 1559.0 1559.0 153.0 0 g 0 30.0 1559.0 1559.0 0.0 1.0 0.0 1559.0 0.0 1559.0 14.0 1.0 475.0 0 t 0 535.0 1.0 0.0 0.0 0.0 1.0 0.0 1559.0 0.0 267.0 14.0 279.0 0
MA1559.1_rc_shift2 (SNAI3_rc)				; oligos_6nt_mkv4_m42 versus MA1559.1_rc (SNAI3_rc); m=13/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.687714; --trCACCTGyt-- ; cor=; Ncor= a 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 c 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 g 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 t 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0
MA0500.2_shift1 (MYOG)				; oligos_6nt_mkv4_m42 versus MA0500.2 (MYOG); m=14/40; ncol2=12; w=12; offset=0; strand=D; shift=1; score=0.687262; -sarCAGCTGyts- ; cor=; Ncor= a 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 c 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 g 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 t 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0
MA0521.1_rc_shift1 (Tcf12_rc)				; oligos_6nt_mkv4_m42 versus MA0521.1_rc (Tcf12_rc); m=15/40; ncol2=11; w=11; offset=0; strand=R; shift=1; score=0.65464; -cwsCAGCTGYy-- ; cor=; Ncor= a 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 c 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 g 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 t 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0
MA0147.3_shift1 (MYC)				; oligos_6nt_mkv4_m42 versus MA0147.3 (MYC); m=16/40; ncol2=12; w=12; offset=0; strand=D; shift=1; score=0.64958; -ssCCACGTGcys- ; cor=; Ncor= a 0 1038.0 1019.0 438.0 44.0 4600.0 54.0 169.0 59.0 23.0 419.0 961.0 755.0 0 c 0 1345.0 1287.0 3746.0 4840.0 59.0 4525.0 157.0 162.0 56.0 2801.0 1524.0 1785.0 0 g 0 1649.0 1757.0 472.0 31.0 170.0 70.0 4578.0 63.0 4817.0 1198.0 1036.0 1348.0 0 t 0 910.0 879.0 286.0 27.0 113.0 293.0 38.0 4658.0 46.0 524.0 1421.0 1054.0 0
MA1100.2_rc_shift2 (ASCL1_rc)				; oligos_6nt_mkv4_m42 versus MA1100.2_rc (ASCL1_rc); m=17/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.646002; --rgCAGCTGyy-- ; cor=; Ncor= a 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 c 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 g 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 t 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0
MA0820.1_shift2 (FIGLA)				; oligos_6nt_mkv4_m42 versus MA0820.1 (FIGLA); m=18/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.616312; --wmCACCTGkw-- ; cor=; Ncor= a 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 c 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 g 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 t 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0
MA0048.2_shift2 (NHLH1)				; oligos_6nt_mkv4_m42 versus MA0048.2 (NHLH1); m=19/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.597128; --cGCAGCTGCk-- ; cor=; Ncor= a 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 c 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 g 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 t 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0
MA0616.2_rc_shift2 (HES2_rc)				; oligos_6nt_mkv4_m42 versus MA0616.2_rc (HES2_rc); m=20/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.591505; --grCACGTGcC-- ; cor=; Ncor= a 0 0 1319.0 3849.0 0.0 8483.0 0.0 129.0 0.0 73.0 1581.0 798.0 0 0 c 0 0 1735.0 1289.0 8483.0 0.0 8483.0 0.0 2028.0 85.0 8483.0 8483.0 0 0 g 0 0 4464.0 4634.0 15.0 1098.0 0.0 8483.0 0.0 8483.0 1107.0 1193.0 0 0 t 0 0 966.0 512.0 53.0 0.0 0.0 0.0 6455.0 118.0 1501.0 775.0 0 0
MA0816.1_shift2 (Ascl2)				; oligos_6nt_mkv4_m42 versus MA0816.1 (Ascl2); m=21/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.589932; --arCAGCTGyy-- ; cor=; Ncor= a 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0
MA0823.1_shift2 (HEY1)				; oligos_6nt_mkv4_m42 versus MA0823.1 (HEY1); m=22/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.583899; --grCACGTGyc-- ; cor=; Ncor= a 0 0 437.0 1373.0 1.0 3338.0 0.0 0.0 0.0 32.0 333.0 475.0 0 0 c 0 0 761.0 656.0 3338.0 30.0 3338.0 18.0 474.0 19.0 1762.0 2172.0 0 0 g 0 0 1788.0 1199.0 3.0 123.0 0.0 3338.0 10.0 3338.0 380.0 373.0 0 0 t 0 0 352.0 110.0 15.0 21.0 0.0 0.0 3338.0 22.0 863.0 318.0 0 0
MA0649.1_rc_shift2 (HEY2_rc)				; oligos_6nt_mkv4_m42 versus MA0649.1_rc (HEY2_rc); m=23/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.581022; --grCACGTGyC-- ; cor=; Ncor= a 0 0 264.0 753.0 30.0 1800.0 0.0 0.0 0.0 58.0 224.0 101.0 0 0 c 0 0 382.0 128.0 1800.0 0.0 1800.0 0.0 128.0 83.0 620.0 1800.0 0 0 g 0 0 869.0 1047.0 34.0 120.0 72.0 1800.0 0.0 1800.0 305.0 99.0 0 0 t 0 0 285.0 50.0 0.0 36.0 27.0 7.0 1800.0 84.0 651.0 107.0 0 0
MA1560.1_shift2 (SOHLH2)				; oligos_6nt_mkv4_m42 versus MA1560.1 (SOHLH2); m=24/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.574637; --ygCACGTGcr-- ; cor=; Ncor= a 0 0 230.0 172.0 45.0 1212.0 0.0 14.0 36.0 41.0 272.0 381.0 0 0 c 0 0 485.0 264.0 1212.0 0.0 1212.0 0.0 65.0 4.0 1212.0 239.0 0 0 g 0 0 184.0 1212.0 29.0 41.0 11.0 1212.0 0.0 1212.0 172.0 369.0 0 0 t 0 0 313.0 276.0 70.0 0.0 7.0 15.0 1212.0 4.0 153.0 224.0 0 0
MA0464.2_shift2 (BHLHE40)				; oligos_6nt_mkv4_m42 versus MA0464.2 (BHLHE40); m=25/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.563464; --vkCACGTGmc-- ; cor=; Ncor= a 0 0 3824.0 1391.0 59.0 11222.0 23.0 66.0 167.0 4.0 5927.0 1544.0 0 0 c 0 0 3025.0 481.0 11222.0 130.0 11222.0 30.0 248.0 12.0 5295.0 5706.0 0 0 g 0 0 2926.0 5000.0 0.0 78.0 2.0 11222.0 87.0 11222.0 129.0 1385.0 0 0 t 0 0 1447.0 6222.0 14.0 77.0 32.0 0.0 11222.0 72.0 500.0 2587.0 0 0
MA1635.1_rc_shift2 (BHLHE22(var.2)_rc)				; oligos_6nt_mkv4_m42 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=26/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.561384; --csCAGCTGsg-- ; cor=; Ncor= a 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 c 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 g 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 t 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0
MA0825.1_shift2 (MNT)				; oligos_6nt_mkv4_m42 versus MA0825.1 (MNT); m=27/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.559851; --avCACGTGcy-- ; cor=; Ncor= a 0 0 279.0 187.0 27.0 681.0 0.0 15.0 0.0 0.0 150.0 159.0 0 0 c 0 0 128.0 228.0 681.0 0.0 681.0 0.0 0.0 0.0 281.0 229.0 0 0 g 0 0 145.0 203.0 0.0 0.0 7.0 681.0 15.0 681.0 131.0 75.0 0 0 t 0 0 129.0 63.0 5.0 21.0 16.0 0.0 681.0 25.0 120.0 219.0 0 0
MA0058.3_shift2 (MAX)				; oligos_6nt_mkv4_m42 versus MA0058.3 (MAX); m=28/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.550074; --amCACGTGcy-- ; cor=; Ncor= a 0 0 3307.0 1915.0 39.0 6876.0 0.0 329.0 69.0 0.0 1341.0 1122.0 0 0 c 0 0 1556.0 2809.0 6876.0 0.0 6876.0 39.0 159.0 27.0 2450.0 2225.0 0 0 g 0 0 1295.0 1514.0 0.0 87.0 7.0 6876.0 20.0 6876.0 1638.0 986.0 0 0 t 0 0 719.0 637.0 0.0 38.0 229.0 19.0 6876.0 36.0 1446.0 2543.0 0 0
MA1493.1_rc_shift2 (HES6_rc)				; oligos_6nt_mkv4_m42 versus MA1493.1_rc (HES6_rc); m=29/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.549591; --rACACGTGCC-- ; cor=; Ncor= a 0 0 209.0 439.0 0.0 439.0 0.0 16.0 11.0 15.0 13.0 43.0 0 0 c 0 0 0.0 0.0 439.0 29.0 439.0 9.0 9.0 19.0 439.0 439.0 0 0 g 0 0 152.0 21.0 0.0 7.0 12.0 439.0 0.0 439.0 35.0 39.0 0 0 t 0 0 79.0 33.0 0.0 0.0 10.0 2.0 439.0 17.0 16.0 12.0 0 0
MA0100.3_shift2 (MYB)				; oligos_6nt_mkv4_m42 versus MA0100.3 (MYB); m=30/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.54625; --mbCAACTGhm-- ; cor=; Ncor= a 0 0 425.0 292.0 0.0 1478.0 1519.0 0.0 1.0 8.0 401.0 422.0 0 0 c 0 0 422.0 428.0 1513.0 3.0 2.0 1527.0 60.0 3.0 482.0 528.0 0 0 g 0 0 300.0 397.0 5.0 39.0 0.0 0.0 68.0 1516.0 147.0 225.0 0 0 t 0 0 380.0 410.0 9.0 7.0 6.0 0.0 1398.0 0.0 497.0 352.0 0 0
MA1464.1_rc_shift2 (ARNT2_rc)				; oligos_6nt_mkv4_m42 versus MA1464.1_rc (ARNT2_rc); m=31/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.544234; --skCACGTGay-- ; cor=; Ncor= a 0 0 8251.0 7159.0 971.0 40622.0 0.0 148.0 460.0 0.0 40622.0 1951.0 0 0 c 0 0 12031.0 3912.0 40622.0 111.0 40622.0 0.0 532.0 115.0 9525.0 28841.0 0 0 g 0 0 12448.0 22063.0 0.0 932.0 0.0 40622.0 122.0 40622.0 4901.0 4265.0 0 0 t 0 0 7892.0 18559.0 14.0 651.0 84.0 0.0 40622.0 505.0 9572.0 11781.0 0 0
MA1108.2_shift2 (MXI1)				; oligos_6nt_mkv4_m42 versus MA1108.2 (MXI1); m=32/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.543247; --rvCACATGkc-- ; cor=; Ncor= a 0 0 5786.0 6184.0 109.0 21870.0 10.0 20506.0 0.0 527.0 2833.0 4945.0 0 0 c 0 0 4724.0 5841.0 21382.0 1.0 21552.0 0.0 507.0 114.0 5329.0 6343.0 0 0 g 0 0 6326.0 6078.0 97.0 170.0 18.0 1542.0 0.0 21232.0 7228.0 5394.0 0 0 t 0 0 5212.0 3945.0 460.0 7.0 468.0 0.0 21541.0 175.0 6658.0 5366.0 0 0
MA1099.2_rc_shift2 (HES1_rc)				; oligos_6nt_mkv4_m42 versus MA1099.2_rc (HES1_rc); m=33/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.542687; --gvCACGyGcc-- ; cor=; Ncor= a 0 0 3216.0 4837.0 53.0 18526.0 0.0 791.0 232.0 18.0 8007.0 4239.0 0 0 c 0 0 6013.0 6360.0 18526.0 0.0 18526.0 0.0 9081.0 0.0 18526.0 18526.0 0 0 g 0 0 12513.0 6203.0 0.0 4057.0 0.0 18526.0 0.0 18526.0 2072.0 3492.0 0 0 t 0 0 2742.0 1126.0 1.0 253.0 21.0 0.0 9446.0 464.0 5858.0 3321.0 0 0
MA0626.1_shift2 (Npas2)				; oligos_6nt_mkv4_m42 versus MA0626.1 (Npas2); m=34/40; ncol2=10; w=10; offset=1; strand=D; shift=2; score=0.541113; --dsCACGTGtm-- ; cor=; Ncor= a 0 0 273.0 154.0 0.0 999.0 81.0 81.0 0.0 81.0 74.0 297.0 0 0 c 0 0 177.0 377.0 999.0 0.0 918.0 0.0 0.0 0.0 172.0 299.0 0 0 g 0 0 293.0 420.0 0.0 0.0 0.0 918.0 0.0 918.0 188.0 202.0 0 0 t 0 0 257.0 48.0 0.0 0.0 0.0 0.0 999.0 0.0 566.0 202.0 0 0
MA1472.1_rc_shift2 (BHLHA15(var.2)_rc)				; oligos_6nt_mkv4_m42 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=35/40; ncol2=10; w=10; offset=1; strand=R; shift=2; score=0.540774; --rrCAGCTGbt-- ; cor=; Ncor= a 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 c 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 g 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 t 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0
MA0807.1_rc_shift1 (TBX5_rc)				; oligos_6nt_mkv4_m42 versus MA0807.1_rc (TBX5_rc); m=36/40; ncol2=8; w=8; offset=0; strand=R; shift=1; score=0.485371; -TmACACCT----- ; cor=; Ncor= a 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 c 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 g 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 t 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0
MA0806.1_rc_shift1 (TBX4_rc)				; oligos_6nt_mkv4_m42 versus MA0806.1_rc (TBX4_rc); m=37/40; ncol2=8; w=8; offset=0; strand=R; shift=1; score=0.476879; -TcACACCT----- ; cor=; Ncor= a 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 0 0 0 c 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 0 0 0 g 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 0 0 0 t 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0 0 0 0
MA0803.1_rc_shift1 (TBX15_rc)				; oligos_6nt_mkv4_m42 versus MA0803.1_rc (TBX15_rc); m=38/40; ncol2=8; w=8; offset=0; strand=R; shift=1; score=0.449388; -TCACACCT----- ; cor=; Ncor= a 0 96.0 937.0 10502.0 0.0 10502.0 0.0 103.0 112.0 0 0 0 0 0 c 0 306.0 10502.0 324.0 10502.0 245.0 10502.0 10502.0 664.0 0 0 0 0 0 g 0 71.0 454.0 435.0 8.0 175.0 7.0 101.0 74.0 0 0 0 0 0 t 0 10502.0 44.0 140.0 0.0 61.0 19.0 458.0 10502.0 0 0 0 0 0
MA0805.1_rc_shift1 (TBX1_rc)				; oligos_6nt_mkv4_m42 versus MA0805.1_rc (TBX1_rc); m=39/40; ncol2=8; w=8; offset=0; strand=R; shift=1; score=0.435592; -TCACACCT----- ; cor=; Ncor= a 0 0.0 1039.0 11931.0 0.0 11931.0 0.0 669.0 564.0 0 0 0 0 0 c 0 18.0 11931.0 109.0 11931.0 141.0 11931.0 11931.0 1007.0 0 0 0 0 0 g 0 33.0 720.0 613.0 5.0 214.0 0.0 711.0 113.0 0 0 0 0 0 t 0 11931.0 141.0 142.0 0.0 28.0 0.0 1560.0 11931.0 0 0 0 0 0
MA0622.1_rc_shift3 (Mlxip_rc)				; oligos_6nt_mkv4_m42 versus MA0622.1_rc (Mlxip_rc); m=40/40; ncol2=8; w=8; offset=2; strand=R; shift=3; score=0.435199; ---mCACGTGv--- ; cor=; Ncor= a 0 0 0 499.0 0.0 999.0 0.0 0.0 0.0 0.0 263.0 0 0 0 c 0 0 0 250.0 999.0 0.0 999.0 0.0 0.0 0.0 421.0 0 0 0 g 0 0 0 63.0 0.0 0.0 0.0 999.0 0.0 999.0 263.0 0 0 0 t 0 0 0 188.0 0.0 0.0 0.0 0.0 999.0 0.0 53.0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m28_shift2 ; 33 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m28_shift2 (oligos_6nt_mkv4_m28oligos_6nt_mkv4_m28)				; oligos_6nt_mkv4_m28 (oligos_6nt_mkv4_m28oligos_6nt_mkv4_m28); m=0 (reference); ncol1=10; shift=2; ncol=14; --rvCAACTGbs-- ; Alignment reference a 0 0 1804 1646 0 5561 5561 0 0 0 707 1221 0 0 c 0 0 1048 1716 5561 0 0 5561 0 0 1744 1526 0 0 g 0 0 1904 1665 0 0 0 0 0 5561 1444 1443 0 0 t 0 0 805 534 0 0 0 0 5561 0 1666 1371 0 0
MA0100.3_shift2 (MYB)				; oligos_6nt_mkv4_m28 versus MA0100.3 (MYB); m=1/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.981978; --mbCAACTGhm-- ; cor=; Ncor= a 0 0 425.0 292.0 0.0 1478.0 1519.0 0.0 1.0 8.0 401.0 422.0 0 0 c 0 0 422.0 428.0 1513.0 3.0 2.0 1527.0 60.0 3.0 482.0 528.0 0 0 g 0 0 300.0 397.0 5.0 39.0 0.0 0.0 68.0 1516.0 147.0 225.0 0 0 t 0 0 380.0 410.0 9.0 7.0 6.0 0.0 1398.0 0.0 497.0 352.0 0 0
MA1472.1_shift2 (BHLHA15(var.2))				; oligos_6nt_mkv4_m28 versus MA1472.1 (BHLHA15(var.2)); m=2/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.777472; --avCAGCTGyy-- ; cor=; Ncor= a 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 c 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 g 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 t 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0
MA1100.2_shift2 (ASCL1)				; oligos_6nt_mkv4_m28 versus MA1100.2 (ASCL1); m=3/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.774962; --rrCAGCTGcy-- ; cor=; Ncor= a 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0
MA1635.1_rc_shift2 (BHLHE22(var.2)_rc)				; oligos_6nt_mkv4_m28 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=4/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.774006; --csCAGCTGsg-- ; cor=; Ncor= a 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 c 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 g 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 t 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0
MA1638.1_rc_shift2 (HAND2_rc)				; oligos_6nt_mkv4_m28 versus MA1638.1_rc (HAND2_rc); m=5/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.768861; --rvCATCTGkt-- ; cor=; Ncor= a 0 0 7783.0 8498.0 49.0 27962.0 23.0 85.0 4.0 70.0 3155.0 7120.0 0 0 c 0 0 6108.0 8878.0 29851.0 31.0 38.0 30144.0 647.0 132.0 6994.0 7463.0 0 0 g 0 0 10227.0 7690.0 149.0 2276.0 30.0 42.0 410.0 30062.0 11298.0 5564.0 0 0 t 0 0 6165.0 5217.0 234.0 14.0 30192.0 12.0 29222.0 19.0 8836.0 10136.0 0 0
MA0820.1_shift2 (FIGLA)				; oligos_6nt_mkv4_m28 versus MA0820.1 (FIGLA); m=6/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.767774; --wmCACCTGkw-- ; cor=; Ncor= a 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 c 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 g 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 t 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0
MA0816.1_shift2 (Ascl2)				; oligos_6nt_mkv4_m28 versus MA0816.1 (Ascl2); m=7/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.75867; --arCAGCTGyy-- ; cor=; Ncor= a 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0
MA0667.1_shift2 (MYF6)				; oligos_6nt_mkv4_m28 versus MA0667.1 (MYF6); m=8/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.744758; --AACArCTGTY-- ; cor=; Ncor= a 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 0 c 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 0 g 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 0 t 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0 0
MA1558.1_rc_shift2 (SNAI1_rc)				; oligos_6nt_mkv4_m28 versus MA1558.1_rc (SNAI1_rc); m=9/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.743723; --yrCACCTGyh-- ; cor=; Ncor= a 0 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 c 0 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 g 0 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 t 0 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0
MA0048.2_shift2 (NHLH1)				; oligos_6nt_mkv4_m28 versus MA0048.2 (NHLH1); m=10/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.721206; --cGCAGCTGCk-- ; cor=; Ncor= a 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 c 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 g 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 t 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0
MA1559.1_rc_shift2 (SNAI3_rc)				; oligos_6nt_mkv4_m28 versus MA1559.1_rc (SNAI3_rc); m=11/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.720352; --trCACCTGyt-- ; cor=; Ncor= a 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 c 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 g 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 t 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0
MA1467.1_rc_shift2 (ATOH1(var.2)_rc)				; oligos_6nt_mkv4_m28 versus MA1467.1_rc (ATOH1(var.2)_rc); m=12/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.719093; --RACAGCTGTT-- ; cor=; Ncor= a 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 c 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 g 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 t 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0
MA0691.1_shift2 (TFAP4)				; oligos_6nt_mkv4_m28 versus MA0691.1 (TFAP4); m=13/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.703478; --AwCAGCTGwT-- ; cor=; Ncor= a 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0
MA0521.1_rc_shift1 (Tcf12_rc)				; oligos_6nt_mkv4_m28 versus MA0521.1_rc (Tcf12_rc); m=14/32; ncol2=11; w=10; offset=-1; strand=R; shift=1; score=0.69636; -cwsCAGCTGYy-- ; cor=; Ncor= a 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 c 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 g 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 t 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0
MA0103.3_shift2 (ZEB1)				; oligos_6nt_mkv4_m28 versus MA0103.3 (ZEB1); m=15/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.688957; --ssCACCTGsss- ; cor=; Ncor= a 0 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 c 0 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 g 0 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 t 0 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0
MA1648.1_shift2 (TCF12(var.2))				; oligos_6nt_mkv4_m28 versus MA1648.1 (TCF12(var.2)); m=16/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.656285; --ssCACCTGCys- ; cor=; Ncor= a 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 c 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 g 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 t 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0
MA0522.3_shift2 (TCF3)				; oligos_6nt_mkv4_m28 versus MA0522.3 (TCF3); m=17/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.65489; --svCACCTGCss- ; cor=; Ncor= a 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 c 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 g 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 t 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0
MA0500.2_rc_shift1 (MYOG_rc)				; oligos_6nt_mkv4_m28 versus MA0500.2_rc (MYOG_rc); m=18/32; ncol2=12; w=10; offset=-1; strand=R; shift=1; score= 0.6391; -sarCAGCTGyts- ; cor=; Ncor= a 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0
MA1620.1_shift1 (Ptf1a(var.3))				; oligos_6nt_mkv4_m28 versus MA1620.1 (Ptf1a(var.3)); m=19/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score=0.635709; -rmaCACCTGtky- ; cor=; Ncor= a 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 c 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 g 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 t 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0
MA1619.1_shift1 (Ptf1a(var.2))				; oligos_6nt_mkv4_m28 versus MA1619.1 (Ptf1a(var.2)); m=20/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score=0.63417; -rmaCAGCTGtky- ; cor=; Ncor= a 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 c 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 g 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 t 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0
MA1641.1_rc_shift1 (MYF5_rc)				; oligos_6nt_mkv4_m28 versus MA1641.1_rc (MYF5_rc); m=21/32; ncol2=12; w=10; offset=-1; strand=R; shift=1; score=0.625897; -gvaCAGCTGtbc- ; cor=; Ncor= a 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 c 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 g 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 t 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0
MA1618.1_rc_shift0 (Ptf1a_rc)				; oligos_6nt_mkv4_m28 versus MA1618.1_rc (Ptf1a_rc); m=22/32; ncol2=13; w=10; offset=-2; strand=R; shift=0; score=0.590234; dmaaCATCTGtkh- ; cor=; Ncor= a 3622.0 3685.0 8294.0 8564.0 210.0 13973.0 148.0 653.0 106.0 172.0 726.0 2735.0 3699.0 0 c 3376.0 3664.0 2295.0 2854.0 13868.0 118.0 437.0 13072.0 153.0 130.0 2414.0 3568.0 3661.0 0 g 3689.0 3601.0 2341.0 2058.0 122.0 224.0 1724.0 466.0 118.0 14006.0 2747.0 3662.0 2989.0 0 t 3754.0 3491.0 1511.0 965.0 241.0 126.0 12132.0 250.0 14064.0 133.0 8554.0 4476.0 4092.0 0
MA1524.1_shift1 (MSGN1)				; oligos_6nt_mkv4_m28 versus MA1524.1 (MSGN1); m=23/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score= 0.5871; -srCCAwwTGkys- ; cor=; Ncor= a 0 1190.0 3096.0 663.0 0.0 6373.0 2424.0 3766.0 10.0 0.0 412.0 514.0 1388.0 0 c 0 2080.0 576.0 6373.0 6373.0 0.0 627.0 190.0 287.0 10.0 1132.0 3269.0 1976.0 0 g 0 1615.0 3277.0 1613.0 17.0 374.0 112.0 814.0 17.0 6373.0 3104.0 1503.0 1781.0 0 t 0 1488.0 408.0 726.0 0.0 0.0 3950.0 2607.0 6373.0 0.0 3269.0 3104.0 1228.0 0
MA0830.2_shift1 (TCF4)				; oligos_6nt_mkv4_m28 versus MA0830.2 (TCF4); m=24/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.57837; -cggCACCTGccss ; cor=; Ncor= a 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 c 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 g 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 t 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0
MA1642.1_rc_shift1 (NEUROG2(var.2)_rc)				; oligos_6nt_mkv4_m28 versus MA1642.1_rc (NEUROG2(var.2)_rc); m=25/32; ncol2=13; w=10; offset=-1; strand=R; shift=1; score=0.577168; -brCCATCTGtyyy ; cor=; Ncor= a 0 7184.0 9704.0 4904.0 484.0 32515.0 275.0 2806.0 159.0 237.0 1750.0 4721.0 8378.0 7535.0 c 0 8709.0 7581.0 24998.0 33422.0 323.0 418.0 30392.0 301.0 317.0 8039.0 11114.0 10123.0 10813.0 g 0 9034.0 10441.0 2966.0 205.0 904.0 952.0 793.0 211.0 33559.0 8154.0 6467.0 6843.0 7353.0 t 0 9464.0 6665.0 1523.0 280.0 649.0 32746.0 400.0 33720.0 278.0 16448.0 12089.0 9047.0 8690.0
MA0499.2_shift1 (MYOD1)				; oligos_6nt_mkv4_m28 versus MA0499.2 (MYOD1); m=26/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.573901; -cwgCACCTGTymy ; cor=; Ncor= a 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 c 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 g 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 t 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0
MA1109.1_rc_shift0 (NEUROD1_rc)				; oligos_6nt_mkv4_m28 versus MA1109.1_rc (NEUROD1_rc); m=27/32; ncol2=13; w=10; offset=-2; strand=R; shift=0; score=0.573567; syrCCATCTGtyc- ; cor=; Ncor= a 525.0 451.0 580.0 168.0 31.0 2157.0 21.0 90.0 18.0 12.0 47.0 298.0 566.0 0 c 628.0 599.0 418.0 1962.0 2231.0 19.0 77.0 2152.0 16.0 13.0 494.0 906.0 726.0 0 g 591.0 540.0 911.0 93.0 7.0 51.0 150.0 24.0 7.0 2240.0 452.0 323.0 429.0 0 t 538.0 692.0 373.0 59.0 13.0 55.0 2034.0 16.0 2241.0 17.0 1289.0 755.0 561.0 0
MA1631.1_shift1 (ASCL1(var.2))				; oligos_6nt_mkv4_m28 versus MA1631.1 (ASCL1(var.2)); m=28/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.571191; -cdgCACCTGCysc ; cor=; Ncor= a 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 c 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 g 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 t 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0
MA1123.2_rc_shift1 (TWIST1_rc)				; oligos_6nt_mkv4_m28 versus MA1123.2_rc (TWIST1_rc); m=29/32; ncol2=13; w=10; offset=-1; strand=R; shift=1; score=0.565253; -avaCATCTGGwwt ; cor=; Ncor= a 0 7736.0 8588.0 18544.0 582.0 26232.0 214.0 1407.0 274.0 174.0 852.0 9428.0 8259.0 6758.0 c 0 6213.0 7273.0 4069.0 25975.0 288.0 908.0 24166.0 210.0 117.0 2336.0 5772.0 5722.0 6485.0 g 0 6561.0 7402.0 2919.0 396.0 456.0 1687.0 1320.0 136.0 26665.0 20412.0 4597.0 5530.0 5761.0 t 0 6823.0 4070.0 1801.0 380.0 357.0 24524.0 440.0 26713.0 377.0 3733.0 7536.0 7822.0 8329.0
MA0745.2_shift1 (SNAI2)				; oligos_6nt_mkv4_m28 versus MA0745.2 (SNAI2); m=30/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.561421; -aygCACCTGTmry ; cor=; Ncor= a 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 c 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 g 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 t 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0
MA1621.1_shift0 (Rbpjl)				; oligos_6nt_mkv4_m28 versus MA1621.1 (Rbpjl); m=31/32; ncol2=14; w=10; offset=-2; strand=D; shift=0; score=0.544695; svmaCACCTGtsyc ; cor=; Ncor= a 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 c 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 g 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 t 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0
MA1485.1_shift0 (FERD3L)				; oligos_6nt_mkv4_m28 versus MA1485.1 (FERD3L); m=32/32; ncol2=14; w=10; offset=-2; strand=D; shift=0; score=0.540336; GyrmCAGCTGTyAC ; cor=; Ncor= a 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 c 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 g 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 t 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0

One-to-n matrix alignment; reference matrix: local_words_6nt_m20_shift2 ; 33 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
local_words_6nt_m20_shift2 (local_words_6nt_m20local_words_6nt_m20)				; local_words_6nt_m20 (local_words_6nt_m20local_words_6nt_m20); m=0 (reference); ncol1=10; shift=2; ncol=14; --rvCAACTGbs-- ; Alignment reference a 0 0 1804 1646 0 5561 5561 0 0 0 707 1221 0 0 c 0 0 1048 1716 5561 0 0 5561 0 0 1744 1526 0 0 g 0 0 1904 1665 0 0 0 0 0 5561 1444 1443 0 0 t 0 0 805 534 0 0 0 0 5561 0 1666 1371 0 0
MA0100.3_shift2 (MYB)				; local_words_6nt_m20 versus MA0100.3 (MYB); m=1/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.981978; --mbCAACTGhm-- ; cor=; Ncor= a 0 0 425.0 292.0 0.0 1478.0 1519.0 0.0 1.0 8.0 401.0 422.0 0 0 c 0 0 422.0 428.0 1513.0 3.0 2.0 1527.0 60.0 3.0 482.0 528.0 0 0 g 0 0 300.0 397.0 5.0 39.0 0.0 0.0 68.0 1516.0 147.0 225.0 0 0 t 0 0 380.0 410.0 9.0 7.0 6.0 0.0 1398.0 0.0 497.0 352.0 0 0
MA1472.1_shift2 (BHLHA15(var.2))				; local_words_6nt_m20 versus MA1472.1 (BHLHA15(var.2)); m=2/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.777472; --avCAGCTGyy-- ; cor=; Ncor= a 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 c 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 g 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 t 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0
MA1100.2_shift2 (ASCL1)				; local_words_6nt_m20 versus MA1100.2 (ASCL1); m=3/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.774962; --rrCAGCTGcy-- ; cor=; Ncor= a 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0
MA1635.1_rc_shift2 (BHLHE22(var.2)_rc)				; local_words_6nt_m20 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=4/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.774006; --csCAGCTGsg-- ; cor=; Ncor= a 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 c 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 g 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 t 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0
MA1638.1_rc_shift2 (HAND2_rc)				; local_words_6nt_m20 versus MA1638.1_rc (HAND2_rc); m=5/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.768861; --rvCATCTGkt-- ; cor=; Ncor= a 0 0 7783.0 8498.0 49.0 27962.0 23.0 85.0 4.0 70.0 3155.0 7120.0 0 0 c 0 0 6108.0 8878.0 29851.0 31.0 38.0 30144.0 647.0 132.0 6994.0 7463.0 0 0 g 0 0 10227.0 7690.0 149.0 2276.0 30.0 42.0 410.0 30062.0 11298.0 5564.0 0 0 t 0 0 6165.0 5217.0 234.0 14.0 30192.0 12.0 29222.0 19.0 8836.0 10136.0 0 0
MA0820.1_shift2 (FIGLA)				; local_words_6nt_m20 versus MA0820.1 (FIGLA); m=6/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.767774; --wmCACCTGkw-- ; cor=; Ncor= a 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 c 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 g 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 t 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0
MA0816.1_shift2 (Ascl2)				; local_words_6nt_m20 versus MA0816.1 (Ascl2); m=7/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.75867; --arCAGCTGyy-- ; cor=; Ncor= a 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0
MA0667.1_shift2 (MYF6)				; local_words_6nt_m20 versus MA0667.1 (MYF6); m=8/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.744758; --AACArCTGTY-- ; cor=; Ncor= a 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 0 c 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 0 g 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 0 t 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0 0
MA1558.1_rc_shift2 (SNAI1_rc)				; local_words_6nt_m20 versus MA1558.1_rc (SNAI1_rc); m=9/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.743723; --yrCACCTGyh-- ; cor=; Ncor= a 0 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 c 0 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 g 0 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 t 0 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0
MA0048.2_shift2 (NHLH1)				; local_words_6nt_m20 versus MA0048.2 (NHLH1); m=10/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.721206; --cGCAGCTGCk-- ; cor=; Ncor= a 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 c 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 g 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 t 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0
MA1559.1_rc_shift2 (SNAI3_rc)				; local_words_6nt_m20 versus MA1559.1_rc (SNAI3_rc); m=11/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.720352; --trCACCTGyt-- ; cor=; Ncor= a 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 c 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 g 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 t 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0
MA1467.1_rc_shift2 (ATOH1(var.2)_rc)				; local_words_6nt_m20 versus MA1467.1_rc (ATOH1(var.2)_rc); m=12/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.719093; --RACAGCTGTT-- ; cor=; Ncor= a 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 c 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 g 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 t 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0
MA0691.1_shift2 (TFAP4)				; local_words_6nt_m20 versus MA0691.1 (TFAP4); m=13/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.703478; --AwCAGCTGwT-- ; cor=; Ncor= a 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0
MA0521.1_rc_shift1 (Tcf12_rc)				; local_words_6nt_m20 versus MA0521.1_rc (Tcf12_rc); m=14/32; ncol2=11; w=10; offset=-1; strand=R; shift=1; score=0.69636; -cwsCAGCTGYy-- ; cor=; Ncor= a 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 c 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 g 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 t 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0
MA0103.3_shift2 (ZEB1)				; local_words_6nt_m20 versus MA0103.3 (ZEB1); m=15/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.688957; --ssCACCTGsss- ; cor=; Ncor= a 0 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 c 0 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 g 0 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 t 0 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0
MA1648.1_shift2 (TCF12(var.2))				; local_words_6nt_m20 versus MA1648.1 (TCF12(var.2)); m=16/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.656285; --ssCACCTGCys- ; cor=; Ncor= a 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 c 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 g 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 t 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0
MA0522.3_shift2 (TCF3)				; local_words_6nt_m20 versus MA0522.3 (TCF3); m=17/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.65489; --svCACCTGCss- ; cor=; Ncor= a 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 c 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 g 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 t 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0
MA0500.2_rc_shift1 (MYOG_rc)				; local_words_6nt_m20 versus MA0500.2_rc (MYOG_rc); m=18/32; ncol2=12; w=10; offset=-1; strand=R; shift=1; score= 0.6391; -sarCAGCTGyts- ; cor=; Ncor= a 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0
MA1620.1_shift1 (Ptf1a(var.3))				; local_words_6nt_m20 versus MA1620.1 (Ptf1a(var.3)); m=19/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score=0.635709; -rmaCACCTGtky- ; cor=; Ncor= a 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 c 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 g 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 t 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0
MA1619.1_shift1 (Ptf1a(var.2))				; local_words_6nt_m20 versus MA1619.1 (Ptf1a(var.2)); m=20/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score=0.63417; -rmaCAGCTGtky- ; cor=; Ncor= a 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 c 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 g 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 t 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0
MA1641.1_rc_shift1 (MYF5_rc)				; local_words_6nt_m20 versus MA1641.1_rc (MYF5_rc); m=21/32; ncol2=12; w=10; offset=-1; strand=R; shift=1; score=0.625897; -gvaCAGCTGtbc- ; cor=; Ncor= a 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 c 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 g 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 t 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0
MA1618.1_rc_shift0 (Ptf1a_rc)				; local_words_6nt_m20 versus MA1618.1_rc (Ptf1a_rc); m=22/32; ncol2=13; w=10; offset=-2; strand=R; shift=0; score=0.590234; dmaaCATCTGtkh- ; cor=; Ncor= a 3622.0 3685.0 8294.0 8564.0 210.0 13973.0 148.0 653.0 106.0 172.0 726.0 2735.0 3699.0 0 c 3376.0 3664.0 2295.0 2854.0 13868.0 118.0 437.0 13072.0 153.0 130.0 2414.0 3568.0 3661.0 0 g 3689.0 3601.0 2341.0 2058.0 122.0 224.0 1724.0 466.0 118.0 14006.0 2747.0 3662.0 2989.0 0 t 3754.0 3491.0 1511.0 965.0 241.0 126.0 12132.0 250.0 14064.0 133.0 8554.0 4476.0 4092.0 0
MA1524.1_shift1 (MSGN1)				; local_words_6nt_m20 versus MA1524.1 (MSGN1); m=23/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score= 0.5871; -srCCAwwTGkys- ; cor=; Ncor= a 0 1190.0 3096.0 663.0 0.0 6373.0 2424.0 3766.0 10.0 0.0 412.0 514.0 1388.0 0 c 0 2080.0 576.0 6373.0 6373.0 0.0 627.0 190.0 287.0 10.0 1132.0 3269.0 1976.0 0 g 0 1615.0 3277.0 1613.0 17.0 374.0 112.0 814.0 17.0 6373.0 3104.0 1503.0 1781.0 0 t 0 1488.0 408.0 726.0 0.0 0.0 3950.0 2607.0 6373.0 0.0 3269.0 3104.0 1228.0 0
MA0830.2_shift1 (TCF4)				; local_words_6nt_m20 versus MA0830.2 (TCF4); m=24/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.57837; -cggCACCTGccss ; cor=; Ncor= a 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 c 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 g 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 t 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0
MA1642.1_rc_shift1 (NEUROG2(var.2)_rc)				; local_words_6nt_m20 versus MA1642.1_rc (NEUROG2(var.2)_rc); m=25/32; ncol2=13; w=10; offset=-1; strand=R; shift=1; score=0.577168; -brCCATCTGtyyy ; cor=; Ncor= a 0 7184.0 9704.0 4904.0 484.0 32515.0 275.0 2806.0 159.0 237.0 1750.0 4721.0 8378.0 7535.0 c 0 8709.0 7581.0 24998.0 33422.0 323.0 418.0 30392.0 301.0 317.0 8039.0 11114.0 10123.0 10813.0 g 0 9034.0 10441.0 2966.0 205.0 904.0 952.0 793.0 211.0 33559.0 8154.0 6467.0 6843.0 7353.0 t 0 9464.0 6665.0 1523.0 280.0 649.0 32746.0 400.0 33720.0 278.0 16448.0 12089.0 9047.0 8690.0
MA0499.2_shift1 (MYOD1)				; local_words_6nt_m20 versus MA0499.2 (MYOD1); m=26/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.573901; -cwgCACCTGTymy ; cor=; Ncor= a 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 c 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 g 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 t 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0
MA1109.1_rc_shift0 (NEUROD1_rc)				; local_words_6nt_m20 versus MA1109.1_rc (NEUROD1_rc); m=27/32; ncol2=13; w=10; offset=-2; strand=R; shift=0; score=0.573567; syrCCATCTGtyc- ; cor=; Ncor= a 525.0 451.0 580.0 168.0 31.0 2157.0 21.0 90.0 18.0 12.0 47.0 298.0 566.0 0 c 628.0 599.0 418.0 1962.0 2231.0 19.0 77.0 2152.0 16.0 13.0 494.0 906.0 726.0 0 g 591.0 540.0 911.0 93.0 7.0 51.0 150.0 24.0 7.0 2240.0 452.0 323.0 429.0 0 t 538.0 692.0 373.0 59.0 13.0 55.0 2034.0 16.0 2241.0 17.0 1289.0 755.0 561.0 0
MA1631.1_shift1 (ASCL1(var.2))				; local_words_6nt_m20 versus MA1631.1 (ASCL1(var.2)); m=28/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.571191; -cdgCACCTGCysc ; cor=; Ncor= a 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 c 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 g 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 t 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0
MA1123.2_rc_shift1 (TWIST1_rc)				; local_words_6nt_m20 versus MA1123.2_rc (TWIST1_rc); m=29/32; ncol2=13; w=10; offset=-1; strand=R; shift=1; score=0.565253; -avaCATCTGGwwt ; cor=; Ncor= a 0 7736.0 8588.0 18544.0 582.0 26232.0 214.0 1407.0 274.0 174.0 852.0 9428.0 8259.0 6758.0 c 0 6213.0 7273.0 4069.0 25975.0 288.0 908.0 24166.0 210.0 117.0 2336.0 5772.0 5722.0 6485.0 g 0 6561.0 7402.0 2919.0 396.0 456.0 1687.0 1320.0 136.0 26665.0 20412.0 4597.0 5530.0 5761.0 t 0 6823.0 4070.0 1801.0 380.0 357.0 24524.0 440.0 26713.0 377.0 3733.0 7536.0 7822.0 8329.0
MA0745.2_shift1 (SNAI2)				; local_words_6nt_m20 versus MA0745.2 (SNAI2); m=30/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.561421; -aygCACCTGTmry ; cor=; Ncor= a 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 c 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 g 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 t 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0
MA1621.1_shift0 (Rbpjl)				; local_words_6nt_m20 versus MA1621.1 (Rbpjl); m=31/32; ncol2=14; w=10; offset=-2; strand=D; shift=0; score=0.544695; svmaCACCTGtsyc ; cor=; Ncor= a 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 c 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 g 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 t 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0
MA1485.1_shift0 (FERD3L)				; local_words_6nt_m20 versus MA1485.1 (FERD3L); m=32/32; ncol2=14; w=10; offset=-2; strand=D; shift=0; score=0.540336; GyrmCAGCTGTyAC ; cor=; Ncor= a 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 c 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 g 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 t 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0

One-to-n matrix alignment; reference matrix: positions_6nt_m13_shift2 ; 33 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_6nt_m13_shift2 (positions_6nt_m13positions_6nt_m13)				; positions_6nt_m13 (positions_6nt_m13positions_6nt_m13); m=0 (reference); ncol1=10; shift=2; ncol=14; --rvCAACTGbs-- ; Alignment reference a 0 0 1804 1646 0 5561 5561 0 0 0 707 1221 0 0 c 0 0 1048 1716 5561 0 0 5561 0 0 1744 1526 0 0 g 0 0 1904 1665 0 0 0 0 0 5561 1444 1443 0 0 t 0 0 805 534 0 0 0 0 5561 0 1666 1371 0 0
MA0100.3_shift2 (MYB)				; positions_6nt_m13 versus MA0100.3 (MYB); m=1/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.981978; --mbCAACTGhm-- ; cor=; Ncor= a 0 0 425.0 292.0 0.0 1478.0 1519.0 0.0 1.0 8.0 401.0 422.0 0 0 c 0 0 422.0 428.0 1513.0 3.0 2.0 1527.0 60.0 3.0 482.0 528.0 0 0 g 0 0 300.0 397.0 5.0 39.0 0.0 0.0 68.0 1516.0 147.0 225.0 0 0 t 0 0 380.0 410.0 9.0 7.0 6.0 0.0 1398.0 0.0 497.0 352.0 0 0
MA1472.1_shift2 (BHLHA15(var.2))				; positions_6nt_m13 versus MA1472.1 (BHLHA15(var.2)); m=2/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.777472; --avCAGCTGyy-- ; cor=; Ncor= a 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 c 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 g 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 t 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0
MA1100.2_shift2 (ASCL1)				; positions_6nt_m13 versus MA1100.2 (ASCL1); m=3/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.774962; --rrCAGCTGcy-- ; cor=; Ncor= a 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0
MA1635.1_rc_shift2 (BHLHE22(var.2)_rc)				; positions_6nt_m13 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=4/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.774006; --csCAGCTGsg-- ; cor=; Ncor= a 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 c 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 g 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 t 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0
MA1638.1_rc_shift2 (HAND2_rc)				; positions_6nt_m13 versus MA1638.1_rc (HAND2_rc); m=5/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.768861; --rvCATCTGkt-- ; cor=; Ncor= a 0 0 7783.0 8498.0 49.0 27962.0 23.0 85.0 4.0 70.0 3155.0 7120.0 0 0 c 0 0 6108.0 8878.0 29851.0 31.0 38.0 30144.0 647.0 132.0 6994.0 7463.0 0 0 g 0 0 10227.0 7690.0 149.0 2276.0 30.0 42.0 410.0 30062.0 11298.0 5564.0 0 0 t 0 0 6165.0 5217.0 234.0 14.0 30192.0 12.0 29222.0 19.0 8836.0 10136.0 0 0
MA0820.1_shift2 (FIGLA)				; positions_6nt_m13 versus MA0820.1 (FIGLA); m=6/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.767774; --wmCACCTGkw-- ; cor=; Ncor= a 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 c 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 g 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 t 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0
MA0816.1_shift2 (Ascl2)				; positions_6nt_m13 versus MA0816.1 (Ascl2); m=7/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.75867; --arCAGCTGyy-- ; cor=; Ncor= a 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0
MA0667.1_shift2 (MYF6)				; positions_6nt_m13 versus MA0667.1 (MYF6); m=8/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.744758; --AACArCTGTY-- ; cor=; Ncor= a 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 0 c 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 0 g 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 0 t 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0 0
MA1558.1_rc_shift2 (SNAI1_rc)				; positions_6nt_m13 versus MA1558.1_rc (SNAI1_rc); m=9/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.743723; --yrCACCTGyh-- ; cor=; Ncor= a 0 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 c 0 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 g 0 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 t 0 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0
MA0048.2_shift2 (NHLH1)				; positions_6nt_m13 versus MA0048.2 (NHLH1); m=10/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.721206; --cGCAGCTGCk-- ; cor=; Ncor= a 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 c 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 g 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 t 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0
MA1559.1_rc_shift2 (SNAI3_rc)				; positions_6nt_m13 versus MA1559.1_rc (SNAI3_rc); m=11/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.720352; --trCACCTGyt-- ; cor=; Ncor= a 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 c 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 g 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 t 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0
MA1467.1_rc_shift2 (ATOH1(var.2)_rc)				; positions_6nt_m13 versus MA1467.1_rc (ATOH1(var.2)_rc); m=12/32; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.719093; --RACAGCTGTT-- ; cor=; Ncor= a 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 c 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 g 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 t 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0
MA0691.1_shift2 (TFAP4)				; positions_6nt_m13 versus MA0691.1 (TFAP4); m=13/32; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.703478; --AwCAGCTGwT-- ; cor=; Ncor= a 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0
MA0521.1_rc_shift1 (Tcf12_rc)				; positions_6nt_m13 versus MA0521.1_rc (Tcf12_rc); m=14/32; ncol2=11; w=10; offset=-1; strand=R; shift=1; score=0.69636; -cwsCAGCTGYy-- ; cor=; Ncor= a 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 c 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 g 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 t 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0
MA0103.3_shift2 (ZEB1)				; positions_6nt_m13 versus MA0103.3 (ZEB1); m=15/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.688957; --ssCACCTGsss- ; cor=; Ncor= a 0 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 c 0 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 g 0 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 t 0 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0
MA1648.1_shift2 (TCF12(var.2))				; positions_6nt_m13 versus MA1648.1 (TCF12(var.2)); m=16/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.656285; --ssCACCTGCys- ; cor=; Ncor= a 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 c 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 g 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 t 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0
MA0522.3_shift2 (TCF3)				; positions_6nt_m13 versus MA0522.3 (TCF3); m=17/32; ncol2=11; w=10; offset=0; strand=D; shift=2; score=0.65489; --svCACCTGCss- ; cor=; Ncor= a 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 c 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 g 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 t 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0
MA0500.2_rc_shift1 (MYOG_rc)				; positions_6nt_m13 versus MA0500.2_rc (MYOG_rc); m=18/32; ncol2=12; w=10; offset=-1; strand=R; shift=1; score= 0.6391; -sarCAGCTGyts- ; cor=; Ncor= a 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0
MA1620.1_shift1 (Ptf1a(var.3))				; positions_6nt_m13 versus MA1620.1 (Ptf1a(var.3)); m=19/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score=0.635709; -rmaCACCTGtky- ; cor=; Ncor= a 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 c 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 g 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 t 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0
MA1619.1_shift1 (Ptf1a(var.2))				; positions_6nt_m13 versus MA1619.1 (Ptf1a(var.2)); m=20/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score=0.63417; -rmaCAGCTGtky- ; cor=; Ncor= a 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 c 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 g 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 t 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0
MA1641.1_rc_shift1 (MYF5_rc)				; positions_6nt_m13 versus MA1641.1_rc (MYF5_rc); m=21/32; ncol2=12; w=10; offset=-1; strand=R; shift=1; score=0.625897; -gvaCAGCTGtbc- ; cor=; Ncor= a 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 c 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 g 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 t 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0
MA1618.1_rc_shift0 (Ptf1a_rc)				; positions_6nt_m13 versus MA1618.1_rc (Ptf1a_rc); m=22/32; ncol2=13; w=10; offset=-2; strand=R; shift=0; score=0.590234; dmaaCATCTGtkh- ; cor=; Ncor= a 3622.0 3685.0 8294.0 8564.0 210.0 13973.0 148.0 653.0 106.0 172.0 726.0 2735.0 3699.0 0 c 3376.0 3664.0 2295.0 2854.0 13868.0 118.0 437.0 13072.0 153.0 130.0 2414.0 3568.0 3661.0 0 g 3689.0 3601.0 2341.0 2058.0 122.0 224.0 1724.0 466.0 118.0 14006.0 2747.0 3662.0 2989.0 0 t 3754.0 3491.0 1511.0 965.0 241.0 126.0 12132.0 250.0 14064.0 133.0 8554.0 4476.0 4092.0 0
MA1524.1_shift1 (MSGN1)				; positions_6nt_m13 versus MA1524.1 (MSGN1); m=23/32; ncol2=12; w=10; offset=-1; strand=D; shift=1; score= 0.5871; -srCCAwwTGkys- ; cor=; Ncor= a 0 1190.0 3096.0 663.0 0.0 6373.0 2424.0 3766.0 10.0 0.0 412.0 514.0 1388.0 0 c 0 2080.0 576.0 6373.0 6373.0 0.0 627.0 190.0 287.0 10.0 1132.0 3269.0 1976.0 0 g 0 1615.0 3277.0 1613.0 17.0 374.0 112.0 814.0 17.0 6373.0 3104.0 1503.0 1781.0 0 t 0 1488.0 408.0 726.0 0.0 0.0 3950.0 2607.0 6373.0 0.0 3269.0 3104.0 1228.0 0
MA0830.2_shift1 (TCF4)				; positions_6nt_m13 versus MA0830.2 (TCF4); m=24/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.57837; -cggCACCTGccss ; cor=; Ncor= a 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 c 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 g 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 t 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0
MA1642.1_rc_shift1 (NEUROG2(var.2)_rc)				; positions_6nt_m13 versus MA1642.1_rc (NEUROG2(var.2)_rc); m=25/32; ncol2=13; w=10; offset=-1; strand=R; shift=1; score=0.577168; -brCCATCTGtyyy ; cor=; Ncor= a 0 7184.0 9704.0 4904.0 484.0 32515.0 275.0 2806.0 159.0 237.0 1750.0 4721.0 8378.0 7535.0 c 0 8709.0 7581.0 24998.0 33422.0 323.0 418.0 30392.0 301.0 317.0 8039.0 11114.0 10123.0 10813.0 g 0 9034.0 10441.0 2966.0 205.0 904.0 952.0 793.0 211.0 33559.0 8154.0 6467.0 6843.0 7353.0 t 0 9464.0 6665.0 1523.0 280.0 649.0 32746.0 400.0 33720.0 278.0 16448.0 12089.0 9047.0 8690.0
MA0499.2_shift1 (MYOD1)				; positions_6nt_m13 versus MA0499.2 (MYOD1); m=26/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.573901; -cwgCACCTGTymy ; cor=; Ncor= a 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 c 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 g 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 t 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0
MA1109.1_rc_shift0 (NEUROD1_rc)				; positions_6nt_m13 versus MA1109.1_rc (NEUROD1_rc); m=27/32; ncol2=13; w=10; offset=-2; strand=R; shift=0; score=0.573567; syrCCATCTGtyc- ; cor=; Ncor= a 525.0 451.0 580.0 168.0 31.0 2157.0 21.0 90.0 18.0 12.0 47.0 298.0 566.0 0 c 628.0 599.0 418.0 1962.0 2231.0 19.0 77.0 2152.0 16.0 13.0 494.0 906.0 726.0 0 g 591.0 540.0 911.0 93.0 7.0 51.0 150.0 24.0 7.0 2240.0 452.0 323.0 429.0 0 t 538.0 692.0 373.0 59.0 13.0 55.0 2034.0 16.0 2241.0 17.0 1289.0 755.0 561.0 0
MA1631.1_shift1 (ASCL1(var.2))				; positions_6nt_m13 versus MA1631.1 (ASCL1(var.2)); m=28/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.571191; -cdgCACCTGCysc ; cor=; Ncor= a 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 c 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 g 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 t 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0
MA1123.2_rc_shift1 (TWIST1_rc)				; positions_6nt_m13 versus MA1123.2_rc (TWIST1_rc); m=29/32; ncol2=13; w=10; offset=-1; strand=R; shift=1; score=0.565253; -avaCATCTGGwwt ; cor=; Ncor= a 0 7736.0 8588.0 18544.0 582.0 26232.0 214.0 1407.0 274.0 174.0 852.0 9428.0 8259.0 6758.0 c 0 6213.0 7273.0 4069.0 25975.0 288.0 908.0 24166.0 210.0 117.0 2336.0 5772.0 5722.0 6485.0 g 0 6561.0 7402.0 2919.0 396.0 456.0 1687.0 1320.0 136.0 26665.0 20412.0 4597.0 5530.0 5761.0 t 0 6823.0 4070.0 1801.0 380.0 357.0 24524.0 440.0 26713.0 377.0 3733.0 7536.0 7822.0 8329.0
MA0745.2_shift1 (SNAI2)				; positions_6nt_m13 versus MA0745.2 (SNAI2); m=30/32; ncol2=13; w=10; offset=-1; strand=D; shift=1; score=0.561421; -aygCACCTGTmry ; cor=; Ncor= a 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 c 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 g 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 t 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0
MA1621.1_shift0 (Rbpjl)				; positions_6nt_m13 versus MA1621.1 (Rbpjl); m=31/32; ncol2=14; w=10; offset=-2; strand=D; shift=0; score=0.544695; svmaCACCTGtsyc ; cor=; Ncor= a 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 c 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 g 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 t 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0
MA1485.1_shift0 (FERD3L)				; positions_6nt_m13 versus MA1485.1 (FERD3L); m=32/32; ncol2=14; w=10; offset=-2; strand=D; shift=0; score=0.540336; GyrmCAGCTGTyAC ; cor=; Ncor= a 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 c 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 g 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 t 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m15_shift3 ; 18 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m15_shift3 (oligos_6nt_mkv4_m15oligos_6nt_mkv4_m15)				; oligos_6nt_mkv4_m15 (oligos_6nt_mkv4_m15oligos_6nt_mkv4_m15); m=0 (reference); ncol1=12; shift=3; ncol=17; ---csCCCCTCCCss-- ; Alignment reference a 0 0 0 497 457 13 10 10 33 2 32 11 9 437 444 0 0 c 0 0 0 1638 1196 3761 3624 3716 3720 2 3865 3724 3743 1678 1625 0 0 g 0 0 0 966 1432 136 288 198 155 353 0 172 163 1204 1334 0 0 t 0 0 0 828 844 19 7 5 21 3572 32 22 14 610 526 0 0
MA1653.1_shift3 (ZNF148)				; oligos_6nt_mkv4_m15 versus MA1653.1 (ZNF148); m=1/17; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.981867; ---ysCCCCTCCCcc-- ; cor=; Ncor= a 0 0 0 1399.0 1263.0 82.0 132.0 136.0 89.0 133.0 66.0 352.0 442.0 846.0 841.0 0 0 c 0 0 0 4593.0 4057.0 10799.0 10396.0 10526.0 10833.0 14.0 10954.0 9922.0 9283.0 7239.0 7114.0 0 0 g 0 0 0 2241.0 3215.0 205.0 471.0 401.0 211.0 1012.0 112.0 460.0 392.0 1924.0 2064.0 0 0 t 0 0 0 2966.0 2664.0 113.0 200.0 136.0 66.0 10040.0 67.0 465.0 1082.0 1190.0 1180.0 0 0
MA1522.1_shift3 (MAZ)				; oligos_6nt_mkv4_m15 versus MA1522.1 (MAZ); m=2/17; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.897867; ---ssCCCCTCCcc--- ; cor=; Ncor= a 0 0 0 2480.0 1819.0 17.0 49.0 36.0 39.0 6.0 90.0 23.0 1109.0 2016.0 0 0 0 c 0 0 0 5198.0 5068.0 14945.0 14630.0 14731.0 14676.0 0.0 14961.0 14944.0 9372.0 6775.0 0 0 0 g 0 0 0 4277.0 5163.0 75.0 384.0 290.0 347.0 130.0 8.0 96.0 1768.0 2539.0 0 0 0 t 0 0 0 3108.0 3013.0 26.0 0.0 6.0 1.0 14927.0 4.0 0.0 2814.0 3733.0 0 0 0
MA0039.4_shift3 (KLF4)				; oligos_6nt_mkv4_m15 versus MA0039.4 (KLF4); m=3/17; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.840763; ---ssCCCCACCChs-- ; cor=; Ncor= a 0 0 0 12570.0 11487.0 2465.0 2105.0 7021.0 1173.0 45602.0 852.0 1617.0 1202.0 16264.0 9959.0 0 0 c 0 0 0 17520.0 14038.0 49209.0 47865.0 45405.0 52875.0 161.0 52366.0 51112.0 51045.0 18249.0 19217.0 0 0 g 0 0 0 14243.0 18473.0 1583.0 1214.0 1422.0 793.0 6598.0 1470.0 1870.0 1005.0 6292.0 14422.0 0 0 t 0 0 0 11484.0 11819.0 2560.0 4633.0 1969.0 976.0 3456.0 1129.0 1218.0 2565.0 15012.0 12219.0 0 0
MA1513.1_shift4 (KLF15)				; oligos_6nt_mkv4_m15 versus MA1513.1 (KLF15); m=4/17; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.752562; ----scCCCGCCCcs-- ; cor=; Ncor= a 0 0 0 0 1184.0 937.0 40.0 93.0 0.0 0.0 11.0 55.0 12.0 1566.0 1067.0 0 0 c 0 0 0 0 2903.0 6506.0 11234.0 10940.0 11368.0 0.0 11345.0 10954.0 11254.0 6267.0 5013.0 0 0 g 0 0 0 0 5538.0 2117.0 86.0 333.0 1.0 11369.0 2.0 359.0 100.0 1934.0 3124.0 0 0 t 0 0 0 0 1744.0 1809.0 9.0 3.0 0.0 0.0 11.0 1.0 3.0 1602.0 2165.0 0 0
MA0599.1_shift4 (KLF5)				; oligos_6nt_mkv4_m15 versus MA0599.1 (KLF5); m=5/17; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.746649; ----gCCMCrCCCh--- ; cor=; Ncor= a 0 0 0 0 1429.0 0.0 0.0 3477.0 0.0 5051.0 0.0 0.0 0.0 3915.0 0 0 0 c 0 0 0 0 2023.0 11900.0 12008.0 9569.0 13611.0 0.0 13611.0 13611.0 13135.0 5595.0 0 0 0 g 0 0 0 0 7572.0 0.0 0.0 0.0 0.0 5182.0 0.0 0.0 0.0 0.0 0 0 0 t 0 0 0 0 2587.0 1711.0 1603.0 565.0 0.0 3378.0 0.0 0.0 476.0 4101.0 0 0 0
MA0753.2_shift2 (ZNF740)				; oligos_6nt_mkv4_m15 versus MA0753.2 (ZNF740); m=6/17; ncol2=13; w=12; offset=-1; strand=D; shift=2; score=0.711894; --cyrCCCCCCCCAc-- ; cor=; Ncor= a 0 0 186.0 162.0 727.0 60.0 110.0 18.0 22.0 23.0 10.0 2.0 115.0 1055.0 207.0 0 0 c 0 0 502.0 677.0 343.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 1055.0 239.0 1055.0 0 0 g 0 0 182.0 72.0 1055.0 37.0 14.0 4.0 7.0 3.0 7.0 3.0 6.0 68.0 54.0 0 0 t 0 0 185.0 378.0 312.0 49.0 1.0 16.0 15.0 11.0 6.0 3.0 4.0 134.0 246.0 0 0
MA1515.1_shift3 (KLF2)				; oligos_6nt_mkv4_m15 versus MA1515.1 (KLF2); m=7/17; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.694818; ---srCCmCrCCCw--- ; cor=; Ncor= a 0 0 0 1054.0 2510.0 741.0 403.0 4622.0 0.0 1702.0 0.0 128.0 68.0 1838.0 0 0 0 c 0 0 0 1376.0 1103.0 4622.0 4622.0 2265.0 4622.0 274.0 4622.0 4622.0 4622.0 1142.0 0 0 0 g 0 0 0 1320.0 2112.0 495.0 186.0 1060.0 0.0 2920.0 49.0 195.0 105.0 389.0 0 0 0 t 0 0 0 872.0 433.0 346.0 312.0 214.0 78.0 167.0 22.0 9.0 444.0 1253.0 0 0 0
MA0741.1_shift4 (KLF16)				; oligos_6nt_mkv4_m15 versus MA0741.1 (KLF16); m=8/17; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.684815; ----gmCMCgCCCMC-- ; cor=; Ncor= a 0 0 0 0 666.0 901.0 62.0 1150.0 66.0 497.0 8.0 2.0 16.0 437.0 32.0 0 0 c 0 0 0 0 535.0 1612.0 1612.0 461.0 1612.0 173.0 1612.0 1612.0 1612.0 1175.0 1612.0 0 0 g 0 0 0 0 1612.0 77.0 6.0 32.0 17.0 1612.0 0.0 8.0 3.0 19.0 23.0 0 0 t 0 0 0 0 240.0 116.0 45.0 0.0 19.0 403.0 0.0 0.0 97.0 40.0 370.0 0 0
MA0528.2_rc_shift4 (ZNF263_rc)				; oligos_6nt_mkv4_m15 versus MA0528.2_rc (ZNF263_rc); m=9/17; ncol2=12; w=11; offset=1; strand=R; shift=4; score=0.662671; ----csTCCTCCCcsc- ; cor=; Ncor= a 0 0 0 0 11103.0 6566.0 638.0 717.0 1672.0 620.0 986.0 1192.0 1270.0 8247.0 12535.0 9733.0 0 c 0 0 0 0 25115.0 24825.0 1448.0 52741.0 52875.0 163.0 53435.0 52818.0 51804.0 28912.0 17883.0 20283.0 0 g 0 0 0 0 11689.0 15413.0 1758.0 2190.0 966.0 1660.0 972.0 1544.0 1659.0 6183.0 14909.0 13040.0 0 t 0 0 0 0 8436.0 9539.0 52499.0 695.0 830.0 53900.0 950.0 789.0 1610.0 13001.0 11016.0 13287.0 0
MA0746.2_shift3 (SP3)				; oligos_6nt_mkv4_m15 versus MA0746.2 (SP3); m=10/17; ncol2=13; w=12; offset=0; strand=D; shift=3; score=0.656786; ---srCCACGCCCmCy- ; cor=; Ncor= a 0 0 0 1267.0 2146.0 664.0 160.0 5253.0 6.0 465.0 0.0 0.0 2.0 3430.0 556.0 1516.0 0 c 0 0 0 1884.0 531.0 6591.0 6591.0 1338.0 6591.0 0.0 6591.0 6591.0 6591.0 3160.0 5116.0 2608.0 0 g 0 0 0 1895.0 4445.0 226.0 54.0 2.0 0.0 6591.0 0.0 0.0 2.0 39.0 297.0 524.0 0 t 0 0 0 1545.0 421.0 345.0 202.0 11.0 12.0 504.0 0.0 9.0 718.0 552.0 1475.0 1943.0 0
MA1564.1_shift4 (SP9)				; oligos_6nt_mkv4_m15 versus MA1564.1 (SP9); m=11/17; ncol2=12; w=11; offset=1; strand=D; shift=4; score=0.611564; ----rcCmCGCCCmcy- ; cor=; Ncor= a 0 0 0 0 834.0 566.0 321.0 2451.0 2.0 211.0 22.0 0.0 39.0 1192.0 188.0 420.0 0 c 0 0 0 0 440.0 2451.0 2451.0 1127.0 2451.0 200.0 2451.0 2451.0 2451.0 1259.0 1863.0 1167.0 0 g 0 0 0 0 952.0 309.0 113.0 56.0 17.0 2451.0 0.0 0.0 24.0 38.0 191.0 204.0 0 t 0 0 0 0 226.0 518.0 284.0 96.0 9.0 173.0 14.0 30.0 412.0 353.0 588.0 660.0 0
MA0747.1_shift4 (SP8)				; oligos_6nt_mkv4_m15 versus MA0747.1 (SP8); m=12/17; ncol2=12; w=11; offset=1; strand=D; shift=4; score=0.60443; ----rmCACgCCCmCy- ; cor=; Ncor= a 0 0 0 0 52.0 54.0 25.0 133.0 7.0 25.0 5.0 2.0 0.0 90.0 13.0 31.0 0 c 0 0 0 0 27.0 113.0 167.0 33.0 167.0 37.0 167.0 167.0 167.0 77.0 167.0 52.0 0 g 0 0 0 0 78.0 0.0 0.0 1.0 1.0 167.0 6.0 3.0 4.0 6.0 21.0 1.0 0 t 0 0 0 0 10.0 4.0 13.0 2.0 5.0 39.0 2.0 0.0 15.0 3.0 39.0 82.0 0
MA0057.1_rc_shift2 (MZF1(var.2)_rc)				; oligos_6nt_mkv4_m15 versus MA0057.1_rc (MZF1(var.2)_rc); m=13/17; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.571282; --yymCCCMTmv----- ; cor=; Ncor= a 0 0 2.0 2.0 4.0 2.0 0.0 1.0 5.0 0.0 7.0 4.0 0 0 0 0 0 c 0 0 4.0 4.0 8.0 14.0 14.0 15.0 11.0 0.0 7.0 7.0 0 0 0 0 0 g 0 0 2.0 0.0 1.0 0.0 2.0 0.0 0.0 1.0 0.0 4.0 0 0 0 0 0 t 0 0 8.0 10.0 3.0 0.0 0.0 0.0 0.0 15.0 2.0 1.0 0 0 0 0 0
MA0516.2_shift0 (SP2)				; oligos_6nt_mkv4_m15 versus MA0516.2 (SP2); m=14/17; ncol2=17; w=12; offset=-3; strand=D; shift=0; score=0.52212; mTAAGyCCCGCCCmCyy ; cor=; Ncor= a 256.0 53.0 613.0 753.0 54.0 34.0 14.0 16.0 4.0 82.0 0.0 5.0 23.0 402.0 22.0 109.0 150.0 c 308.0 171.0 76.0 84.0 127.0 456.0 774.0 786.0 788.0 52.0 795.0 793.0 774.0 390.0 679.0 221.0 203.0 g 123.0 57.0 0.0 33.0 791.0 8.0 1.0 13.0 22.0 780.0 0.0 26.0 0.0 22.0 1.0 0.0 88.0 t 106.0 608.0 180.0 67.0 43.0 327.0 0.0 8.0 12.0 45.0 18.0 7.0 27.0 17.0 101.0 503.0 352.0
MA1627.1_shift5 (Wt1)				; oligos_6nt_mkv4_m15 versus MA1627.1 (Wt1); m=15/17; ncol2=14; w=10; offset=2; strand=D; shift=5; score=0.51849; -----cycCTCCCCCAC ; cor=; Ncor= a 0 0 0 0 0 876.0 667.0 839.0 48.0 120.0 21.0 40.0 43.0 850.0 31.0 3294.0 158.0 c 0 0 0 0 0 1881.0 1630.0 2948.0 4546.0 69.0 4602.0 4354.0 4252.0 3636.0 4573.0 53.0 3749.0 g 0 0 0 0 0 794.0 1161.0 404.0 58.0 319.0 42.0 75.0 120.0 101.0 46.0 990.0 436.0 t 0 0 0 0 0 1140.0 1233.0 500.0 39.0 4183.0 26.0 222.0 276.0 104.0 41.0 354.0 348.0
MA1578.1_shift6 (VEZF1)				; oligos_6nt_mkv4_m15 versus MA1578.1 (VEZF1); m=16/17; ncol2=10; w=9; offset=3; strand=D; shift=6; score=0.487389; ------CCCCCCmytw- ; cor=; Ncor= a 0 0 0 0 0 0 71.0 1.0 4.0 2.0 6.0 10.0 406.0 44.0 240.0 333.0 0 c 0 0 0 0 0 0 790.0 997.0 995.0 997.0 989.0 977.0 357.0 550.0 171.0 173.0 0 g 0 0 0 0 0 0 137.0 0.0 0.0 0.0 0.0 3.0 110.0 70.0 211.0 152.0 0 t 0 0 0 0 0 0 0.0 0.0 0.0 0.0 4.0 8.0 125.0 334.0 377.0 339.0 0
MA1630.1_rc_shift7 (Znf281_rc)				; oligos_6nt_mkv4_m15 versus MA1630.1_rc (Znf281_rc); m=17/17; ncol2=11; w=8; offset=4; strand=R; shift=7; score=0.47516; -------CcTCCCCCAc ; cor=; Ncor= a 0 0 0 0 0 0 0 315.0 1103.0 11.0 52.0 29.0 23.0 24.0 12.0 6298.0 745.0 c 0 0 0 0 0 0 0 5523.0 4312.0 8.0 6457.0 6402.0 6378.0 6356.0 6449.0 29.0 3751.0 g 0 0 0 0 0 0 0 356.0 418.0 45.0 41.0 115.0 131.0 163.0 88.0 233.0 1076.0 t 0 0 0 0 0 0 0 374.0 735.0 6504.0 18.0 22.0 36.0 25.0 19.0 8.0 996.0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m20_shift3 ; 28 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m20_shift3 (oligos_7nt_mkv5_m20oligos_7nt_mkv5_m20)				; oligos_7nt_mkv5_m20 (oligos_7nt_mkv5_m20oligos_7nt_mkv5_m20); m=0 (reference); ncol1=11; shift=3; ncol=16; ---ssACTTCCGss-- ; Alignment reference a 0 0 0 172 159 1332 36 20 25 40 0 4 144 195 0 0 c 0 0 0 479 582 6 1227 11 11 1324 1348 26 423 453 0 0 g 0 0 0 437 366 36 64 99 5 3 34 1350 617 402 0 0 t 0 0 0 294 275 8 55 1252 1341 15 0 2 198 332 0 0
MA0765.2_shift3 (ETV5)				; oligos_7nt_mkv5_m20 versus MA0765.2 (ETV5); m=1/27; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.981355; ---bcACTTCCGsy-- ; cor=; Ncor= a 0 0 0 4531.0 4782.0 19410.0 312.0 1043.0 222.0 243.0 367.0 1295.0 3017.0 4679.0 0 0 c 0 0 0 8003.0 10307.0 2443.0 24041.0 1145.0 956.0 25484.0 25061.0 1743.0 6921.0 8378.0 0 0 g 0 0 0 7117.0 6129.0 3017.0 994.0 408.0 816.0 336.0 498.0 18757.0 11944.0 6039.0 0 0 t 0 0 0 6667.0 5100.0 1448.0 971.0 23722.0 24324.0 255.0 392.0 4523.0 4436.0 7222.0 0 0
MA0076.2_shift3 (ELK4)				; oligos_7nt_mkv5_m20 versus MA0076.2 (ELK4); m=2/27; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.93896; ---scrCTTCCGGy-- ; cor=; Ncor= a 0 0 0 298.0 391.0 2034.0 0.0 8.0 0.0 0.0 0.0 0.0 0.0 290.0 0 0 c 0 0 0 1458.0 1905.0 145.0 2688.0 0.0 0.0 3427.0 3427.0 0.0 501.0 1253.0 0 0 g 0 0 0 886.0 570.0 1038.0 16.0 0.0 0.0 0.0 0.0 2915.0 2843.0 668.0 0 0 t 0 0 0 785.0 561.0 210.0 723.0 3419.0 3427.0 0.0 0.0 512.0 83.0 1216.0 0 0
MA0645.1_rc_shift4 (ETV6_rc)				; oligos_7nt_mkv5_m20 versus MA0645.1_rc (ETV6_rc); m=3/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.876215; ----yACTTCCGsk-- ; cor=; Ncor= a 0 0 0 0 1091.0 6687.0 0.0 41.0 0.0 22.0 13.0 308.0 441.0 2002.0 0 0 c 0 0 0 0 3205.0 233.0 6687.0 32.0 7.0 6687.0 6687.0 397.0 4292.0 4684.0 0 0 g 0 0 0 0 342.0 834.0 52.0 13.0 0.0 0.0 0.0 6379.0 2394.0 6562.0 0 0 t 0 0 0 0 2049.0 184.0 768.0 6687.0 6687.0 21.0 7.0 1476.0 342.0 9414.0 0 0
MA0759.1_rc_shift4 (ELK3_rc)				; oligos_7nt_mkv5_m20 versus MA0759.1_rc (ELK3_rc); m=4/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.851751; ----yACTTCCGGt-- ; cor=; Ncor= a 0 0 0 0 492.0 2237.0 58.0 353.0 1.0 78.0 0.0 8.0 77.0 456.0 0 0 c 0 0 0 0 649.0 168.0 2237.0 0.0 3.0 2237.0 2237.0 14.0 223.0 713.0 0 0 g 0 0 0 0 318.0 487.0 245.0 43.0 7.0 4.0 0.0 2237.0 2237.0 294.0 0 0 t 0 0 0 0 778.0 151.0 498.0 2237.0 2237.0 2.0 1.0 120.0 269.0 2237.0 0 0
MA0028.2_rc_shift4 (ELK1_rc)				; oligos_7nt_mkv5_m20 versus MA0028.2_rc (ELK1_rc); m=5/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.851095; ----yACTTCCGGT-- ; cor=; Ncor= a 0 0 0 0 8587.0 45807.0 294.0 2165.0 25.0 713.0 26.0 21.0 236.0 5718.0 0 0 c 0 0 0 0 17273.0 1123.0 45807.0 60.0 62.0 45807.0 45807.0 59.0 1478.0 12959.0 0 0 g 0 0 0 0 6673.0 6309.0 2361.0 333.0 233.0 41.0 21.0 45807.0 45807.0 2750.0 0 0 t 0 0 0 0 13274.0 916.0 3016.0 45807.0 45807.0 4.0 0.0 359.0 1217.0 45807.0 0 0
MA0763.1_rc_shift4 (ETV3_rc)				; oligos_7nt_mkv5_m20 versus MA0763.1_rc (ETV3_rc); m=6/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.843342; ----cACTTCCGGT-- ; cor=; Ncor= a 0 0 0 0 25.0 215.0 0.0 71.0 4.0 16.0 14.0 13.0 31.0 24.0 0 0 c 0 0 0 0 98.0 7.0 215.0 0.0 0.0 215.0 215.0 0.0 14.0 38.0 0 0 g 0 0 0 0 41.0 32.0 14.0 0.0 8.0 0.0 0.0 215.0 215.0 27.0 0 0 t 0 0 0 0 52.0 0.0 58.0 215.0 215.0 0.0 0.0 9.0 18.0 215.0 0 0
MA0156.2_rc_shift4 (FEV_rc)				; oligos_7nt_mkv5_m20 versus MA0156.2_rc (FEV_rc); m=7/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.833007; ----yAyTTCCGGt-- ; cor=; Ncor= a 0 0 0 0 1499.0 7249.0 92.0 2196.0 18.0 9.0 2.0 3.0 243.0 1629.0 0 0 c 0 0 0 0 2257.0 624.0 7249.0 6.0 3.0 7249.0 7249.0 51.0 718.0 1555.0 0 0 g 0 0 0 0 1358.0 1821.0 366.0 154.0 11.0 1.0 0.0 7249.0 7249.0 574.0 0 0 t 0 0 0 0 2134.0 444.0 3318.0 7249.0 7249.0 2.0 13.0 614.0 1165.0 7249.0 0 0
MA0760.1_rc_shift4 (ERF_rc)				; oligos_7nt_mkv5_m20 versus MA0760.1_rc (ERF_rc); m=8/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.821302; ----yAyTTCCGGT-- ; cor=; Ncor= a 0 0 0 0 22.0 205.0 0.0 30.0 2.0 0.0 0.0 0.0 34.0 3.0 0 0 c 0 0 0 0 92.0 11.0 205.0 0.0 3.0 205.0 205.0 6.0 8.0 33.0 0 0 g 0 0 0 0 28.0 41.0 17.0 0.0 3.0 3.0 0.0 205.0 205.0 4.0 0 0 t 0 0 0 0 62.0 0.0 82.0 205.0 205.0 0.0 0.0 25.0 7.0 205.0 0 0
MA0474.2_rc_shift4 (ERG_rc)				; oligos_7nt_mkv5_m20 versus MA0474.2_rc (ERG_rc); m=9/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.811442; ----cAyTTCCGGT-- ; cor=; Ncor= a 0 0 0 0 792.0 4566.0 28.0 1245.0 7.0 29.0 0.0 6.0 97.0 928.0 0 0 c 0 0 0 0 1668.0 355.0 2576.0 7.0 0.0 4566.0 4566.0 22.0 398.0 848.0 0 0 g 0 0 0 0 1100.0 1586.0 100.0 119.0 20.0 1.0 0.0 4566.0 4566.0 268.0 0 0 t 0 0 0 0 1006.0 137.0 1990.0 4566.0 4566.0 0.0 1.0 635.0 646.0 4566.0 0 0
MA0098.3_rc_shift4 (ETS1_rc)				; oligos_7nt_mkv5_m20 versus MA0098.3_rc (ETS1_rc); m=10/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.806403; ----yAyWTCCGGT-- ; cor=; Ncor= a 0 0 0 0 396.0 1970.0 12.0 909.0 0.0 12.0 0.0 0.0 22.0 241.0 0 0 c 0 0 0 0 1083.0 124.0 1580.0 31.0 0.0 2683.0 2683.0 7.0 297.0 640.0 0 0 g 0 0 0 0 401.0 712.0 21.0 9.0 0.0 0.0 21.0 2683.0 2683.0 210.0 0 0 t 0 0 0 0 803.0 89.0 1102.0 2683.0 2683.0 0.0 0.0 425.0 180.0 2683.0 0 0
MA0475.2_rc_shift4 (FLI1_rc)				; oligos_7nt_mkv5_m20 versus MA0475.2_rc (FLI1_rc); m=11/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.800852; ----cAyTTCCGGT-- ; cor=; Ncor= a 0 0 0 0 6668.0 32413.0 83.0 6065.0 11.0 60.0 2.0 0.0 292.0 4483.0 0 0 c 0 0 0 0 18560.0 1986.0 24484.0 24.0 19.0 43586.0 43586.0 90.0 1858.0 5132.0 0 0 g 0 0 0 0 7716.0 11173.0 563.0 230.0 21.0 0.0 0.0 43586.0 43586.0 1460.0 0 0 t 0 0 0 0 10642.0 897.0 19102.0 43586.0 43586.0 0.0 5.0 2806.0 2926.0 43586.0 0 0
MA0750.2_rc_shift2 (ZBTB7A_rc)				; oligos_7nt_mkv5_m20 versus MA0750.2_rc (ZBTB7A_rc); m=12/27; ncol2=13; w=11; offset=-1; strand=R; shift=2; score=0.792959; --sscaCTTCCGGsy- ; cor=; Ncor= a 0 0 2266.0 1684.0 1270.0 8444.0 189.0 318.0 178.0 125.0 128.0 234.0 199.0 2105.0 2826.0 0 c 0 0 4669.0 5862.0 9142.0 1623.0 13112.0 261.0 335.0 14239.0 14130.0 624.0 1496.0 4397.0 4167.0 0 g 0 0 4856.0 4386.0 2485.0 3433.0 711.0 343.0 274.0 163.0 210.0 11293.0 12469.0 5356.0 3512.0 0 t 0 0 2850.0 2709.0 1744.0 1141.0 629.0 13719.0 13854.0 114.0 173.0 2490.0 477.0 2783.0 4136.0 0
MA0136.2_rc_shift4 (ELF5_rc)				; oligos_7nt_mkv5_m20 versus MA0136.2_rc (ELF5_rc); m=13/27; ncol2=11; w=10; offset=1; strand=R; shift=4; score=0.775767; ----yaCTTCCksgt- ; cor=; Ncor= a 0 0 0 0 663.0 2470.0 84.0 245.0 4.0 25.0 20.0 56.0 97.0 866.0 793.0 0 c 0 0 0 0 762.0 312.0 2857.0 0.0 1.0 3315.0 3307.0 309.0 1266.0 955.0 301.0 0 g 0 0 0 0 371.0 716.0 155.0 61.0 11.0 0.0 0.0 2528.0 2453.0 2298.0 252.0 0 t 0 0 0 0 959.0 477.0 890.0 2646.0 2699.0 5.0 3.0 1458.0 987.0 1221.0 2416.0 0
MA0641.1_rc_shift4 (ELF4_rc)				; oligos_7nt_mkv5_m20 versus MA0641.1_rc (ELF4_rc); m=14/27; ncol2=12; w=10; offset=1; strand=R; shift=4; score=0.72728; ----yACTTCCGGGTt ; cor=; Ncor= a 0 0 0 0 113.0 979.0 6.0 4.0 2.0 2.0 0.0 0.0 1.0 106.0 149.0 192.0 c 0 0 0 0 463.0 28.0 1207.0 2.0 2.0 1226.0 1226.0 6.0 105.0 75.0 15.0 160.0 g 0 0 0 0 83.0 56.0 18.0 5.0 0.0 0.0 0.0 997.0 990.0 930.0 73.0 109.0 t 0 0 0 0 403.0 4.0 43.0 737.0 739.0 0.0 1.0 54.0 17.0 198.0 705.0 598.0
MA1483.1_rc_shift4 (ELF2_rc)				; oligos_7nt_mkv5_m20 versus MA1483.1_rc (ELF2_rc); m=15/27; ncol2=12; w=10; offset=1; strand=R; shift=4; score= 0.7234; ----yACTTCCGGGTt ; cor=; Ncor= a 0 0 0 0 2291.0 20352.0 0.0 89.0 0.0 8.0 0.0 7.0 17.0 2372.0 3941.0 4123.0 c 0 0 0 0 7278.0 177.0 20352.0 0.0 6.0 20352.0 20352.0 5.0 1806.0 980.0 428.0 3382.0 g 0 0 0 0 2743.0 2943.0 383.0 6.0 5.0 2.0 0.0 20352.0 20352.0 20352.0 1981.0 2913.0 t 0 0 0 0 8041.0 946.0 3123.0 20352.0 20352.0 21.0 0.0 592.0 544.0 6114.0 20352.0 9934.0
MA0764.2_rc_shift4 (ETV4_rc)				; oligos_7nt_mkv5_m20 versus MA0764.2_rc (ETV4_rc); m=16/27; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.663602; ----yrCTTCCTgy-- ; cor=; Ncor= a 0 0 0 0 1426.0 2975.0 31.0 8.0 40.0 67.0 14.0 0.0 664.0 1080.0 0 0 c 0 0 0 0 3055.0 1949.0 8344.0 0.0 0.0 8345.0 8308.0 0.0 1936.0 2721.0 0 0 g 0 0 0 0 1597.0 2194.0 28.0 73.0 0.0 1.0 92.0 61.0 4608.0 1494.0 0 0 t 0 0 0 0 2336.0 1296.0 11.0 8333.0 8374.0 1.0 0.0 8353.0 1206.0 3119.0 0 0
MA0762.1_rc_shift4 (ETV2_rc)				; oligos_7nt_mkv5_m20 versus MA0762.1_rc (ETV2_rc); m=17/27; ncol2=11; w=10; offset=1; strand=R; shift=4; score=0.661511; ----yRYTTCCGGTt- ; cor=; Ncor= a 0 0 0 0 231.0 1184.0 0.0 143.0 0.0 0.0 0.0 0.0 0.0 5.0 369.0 0 c 0 0 0 0 441.0 66.0 337.0 0.0 0.0 1184.0 1184.0 3.0 109.0 23.0 398.0 0 g 0 0 0 0 161.0 440.0 2.0 1.0 0.0 0.0 0.0 1184.0 1184.0 10.0 251.0 0 t 0 0 0 0 742.0 18.0 846.0 1184.0 1184.0 0.0 0.0 116.0 57.0 1184.0 1184.0 0
MA1484.1_rc_shift5 (ETS2_rc)				; oligos_7nt_mkv5_m20 versus MA1484.1_rc (ETS2_rc); m=18/27; ncol2=10; w=9; offset=2; strand=R; shift=5; score=0.646543; -----rCWTCCGGTy- ; cor=; Ncor= a 0 0 0 0 0 8190.0 0.0 4953.0 0.0 0.0 5.0 0.0 0.0 727.0 2945.0 0 c 0 0 0 0 0 415.0 13730.0 0.0 7.0 16738.0 16738.0 0.0 1306.0 3136.0 5702.0 0 g 0 0 0 0 0 8136.0 0.0 204.0 13.0 7.0 0.0 16738.0 16738.0 471.0 2830.0 0 t 0 0 0 0 0 0.0 3050.0 11582.0 16738.0 4.0 7.0 1279.0 643.0 16738.0 5261.0 0
MA0686.1_rc_shift4 (SPDEF_rc)				; oligos_7nt_mkv5_m20 versus MA0686.1_rc (SPDEF_rc); m=19/27; ncol2=11; w=10; offset=1; strand=R; shift=4; score=0.646204; ----yAcATCCGGkT- ; cor=; Ncor= a 0 0 0 0 810.0 4628.0 66.0 4628.0 2.0 8.0 0.0 1.0 0.0 77.0 912.0 0 c 0 0 0 0 1339.0 28.0 4628.0 11.0 6.0 4628.0 4628.0 1.0 92.0 536.0 176.0 0 g 0 0 0 0 568.0 1345.0 601.0 69.0 0.0 0.0 2.0 4628.0 4628.0 2737.0 101.0 0 t 0 0 0 0 1911.0 58.0 1566.0 532.0 4628.0 6.0 2.0 237.0 52.0 1890.0 4628.0 0
MA0473.3_rc_shift2 (ELF1_rc)				; oligos_7nt_mkv5_m20 versus MA0473.3_rc (ELF1_rc); m=20/27; ncol2=14; w=11; offset=-1; strand=R; shift=2; score=0.629302; --byCACTTCCTGktt ; cor=; Ncor= a 0 0 9597.0 6446.0 3089.0 40761.0 399.0 1043.0 368.0 646.0 387.0 636.0 1934.0 7191.0 9983.0 8925.0 c 0 0 13472.0 16920.0 34757.0 2007.0 41738.0 779.0 676.0 45970.0 46642.0 932.0 4819.0 10440.0 11305.0 11540.0 g 0 0 12681.0 11843.0 4236.0 1993.0 1570.0 705.0 796.0 505.0 421.0 4038.0 37923.0 12699.0 7834.0 8627.0 t 0 0 12020.0 12561.0 5688.0 3009.0 4063.0 45243.0 45930.0 649.0 320.0 42164.0 3094.0 17440.0 18648.0 18678.0
MA0640.2_shift1 (ELF3)				; oligos_7nt_mkv5_m20 versus MA0640.2 (ELF3); m=21/27; ncol2=14; w=11; offset=-2; strand=D; shift=1; score=0.626269; -yyccACTTCCTgbt- ; cor=; Ncor= a 0 11697.0 9834.0 5684.0 6456.0 40643.0 554.0 1171.0 432.0 662.0 447.0 776.0 2377.0 9010.0 10659.0 0 c 0 12661.0 13181.0 24731.0 27973.0 2040.0 41950.0 1368.0 943.0 46481.0 47107.0 1315.0 9278.0 13291.0 9085.0 0 g 0 10255.0 11894.0 6930.0 4122.0 2615.0 1365.0 768.0 954.0 566.0 473.0 1989.0 28319.0 13945.0 6001.0 0 t 0 13889.0 13593.0 11157.0 9951.0 3204.0 4633.0 45195.0 46173.0 793.0 475.0 44422.0 8528.0 12256.0 22757.0 0
MA0062.3_shift2 (GABPA)				; oligos_7nt_mkv5_m20 versus MA0062.3 (GABPA); m=22/27; ncol2=14; w=11; offset=-1; strand=D; shift=2; score=0.610757; --yycACTTCCTGtyy ; cor=; Ncor= a 0 0 15887.0 10981.0 7639.0 52260.0 929.0 3885.0 862.0 1398.0 993.0 1722.0 2219.0 5344.0 11903.0 13522.0 c 0 0 16922.0 21679.0 41398.0 3988.0 55664.0 1443.0 1230.0 61373.0 63107.0 1542.0 6328.0 12006.0 18154.0 17382.0 g 0 0 15945.0 13751.0 6989.0 4873.0 2169.0 965.0 1633.0 1150.0 520.0 4561.0 51920.0 7720.0 15081.0 13187.0 t 0 0 16725.0 19068.0 9453.0 4358.0 6717.0 59186.0 61754.0 1558.0 859.0 57654.0 5012.0 40409.0 20341.0 21388.0
MA0761.2_rc_shift2 (ETV1_rc)				; oligos_7nt_mkv5_m20 versus MA0761.2_rc (ETV1_rc); m=23/27; ncol2=14; w=11; offset=-1; strand=R; shift=2; score=0.604105; --yycACTTCCTGtyy ; cor=; Ncor= a 0 0 8666.0 7366.0 5390.0 26961.0 541.0 3073.0 363.0 569.0 350.0 397.0 963.0 4184.0 6935.0 7606.0 c 0 0 9698.0 10820.0 18967.0 3146.0 31256.0 412.0 375.0 36121.0 36483.0 573.0 2389.0 6015.0 10407.0 9643.0 g 0 0 9114.0 7475.0 5060.0 3889.0 1307.0 486.0 471.0 271.0 275.0 3064.0 32139.0 4339.0 8638.0 7468.0 t 0 0 9861.0 11678.0 7922.0 3343.0 4235.0 33368.0 36130.0 378.0 231.0 33305.0 1848.0 22801.0 11359.0 12622.0
MA0598.3_shift2 (EHF)				; oligos_7nt_mkv5_m20 versus MA0598.3 (EHF); m=24/27; ncol2=15; w=11; offset=-1; strand=D; shift=2; score=0.602629; --sycACTTCCTgttt ; cor=; Ncor= a 0 0 3260.0 2702.0 2114.0 13414.0 169.0 427.0 140.0 195.0 158.0 428.0 695.0 2315.0 2247.0 3216.0 c 0 0 4341.0 4628.0 8887.0 456.0 13116.0 167.0 164.0 14833.0 14997.0 608.0 2983.0 3029.0 1762.0 3671.0 g 0 0 4102.0 3355.0 1540.0 775.0 377.0 152.0 199.0 139.0 101.0 1538.0 9061.0 3299.0 1264.0 3088.0 t 0 0 3665.0 4683.0 2827.0 723.0 1706.0 14622.0 14865.0 201.0 112.0 12794.0 2629.0 6725.0 10095.0 5393.0
MA1652.1_rc_shift0 (ZKSCAN5_rc)				; oligos_7nt_mkv5_m20 versus MA1652.1_rc (ZKSCAN5_rc); m=25/27; ncol2=14; w=11; offset=-3; strand=R; shift=0; score=0.552187; yycTCACyTCCtcy-- ; cor=; Ncor= a 537.0 477.0 548.0 25.0 9.0 3092.0 49.0 27.0 19.0 26.0 50.0 701.0 604.0 660.0 0 0 c 1052.0 1078.0 2034.0 62.0 3251.0 76.0 3149.0 1827.0 47.0 3236.0 3111.0 801.0 1197.0 1161.0 0 0 g 569.0 504.0 370.0 41.0 24.0 86.0 37.0 27.0 62.0 27.0 30.0 315.0 704.0 636.0 0 0 t 1169.0 1268.0 375.0 3199.0 43.0 73.0 92.0 1446.0 3199.0 38.0 136.0 1510.0 822.0 870.0 0 0
MA0687.1_rc_shift4 (SPIC_rc)				; oligos_7nt_mkv5_m20 versus MA0687.1_rc (SPIC_rc); m=26/27; ncol2=14; w=10; offset=1; strand=R; shift=4; score=0.532215; ----tACTTCCksWTT ; cor=; Ncor= a 0 0 0 0 19.0 194.0 0.0 8.0 16.0 26.0 3.0 0.0 13.0 75.0 4.0 18.0 c 0 0 0 0 9.0 17.0 231.0 13.0 0.0 232.0 217.0 48.0 181.0 0.0 0.0 13.0 g 0 0 0 0 36.0 24.0 0.0 31.0 7.0 0.0 8.0 59.0 75.0 0.0 9.0 25.0 t 0 0 0 0 115.0 45.0 13.0 192.0 204.0 13.0 0.0 88.0 30.0 171.0 194.0 186.0
MA0081.2_shift1 (SPIB)				; oligos_7nt_mkv5_m20 versus MA0081.2 (SPIB); m=27/27; ncol2=16; w=11; offset=-2; strand=D; shift=1; score=0.519803; -tytCACTTCCTCttt ; cor=; Ncor= a 0 5347.0 4682.0 2179.0 379.0 24319.0 239.0 450.0 190.0 206.0 275.0 865.0 1020.0 4963.0 2838.0 4159.0 c 0 5797.0 8293.0 6429.0 23971.0 619.0 22730.0 236.0 200.0 26145.0 25492.0 4517.0 20113.0 3922.0 5425.0 6029.0 g 0 4026.0 4544.0 3193.0 1721.0 669.0 2516.0 157.0 243.0 153.0 129.0 1829.0 2316.0 781.0 2087.0 2409.0 t 0 11760.0 9411.0 15129.0 859.0 1323.0 1445.0 26087.0 26297.0 426.0 1034.0 19719.0 3481.0 17264.0 16580.0 14333.0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m1_shift5 ; 35 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m1_shift5 (oligos_7nt_mkv5_m1oligos_7nt_mkv5_m1)				; oligos_7nt_mkv5_m1 (oligos_7nt_mkv5_m1oligos_7nt_mkv5_m1); m=0 (reference); ncol1=11; shift=5; ncol=19; -----ksTGACTCAsm--- ; Alignment reference a 0 0 0 0 0 768 901 0 19 3689 13 0 57 3672 346 986 0 0 0 c 0 0 0 0 0 775 1126 8 6 0 3650 9 3600 2 1133 1119 0 0 0 g 0 0 0 0 0 1204 1454 2 3612 0 13 17 3 15 1358 869 0 0 0 t 0 0 0 0 0 942 208 3679 52 0 13 3663 29 0 852 715 0 0 0
MA1634.1_shift5 (BATF)				; oligos_7nt_mkv5_m1 versus MA1634.1 (BATF); m=1/34; ncol2=11; w=11; offset=0; strand=D; shift=5; score=0.963923; -----waTGACTCAth--- ; cor=; Ncor= a 0 0 0 0 0 13555.0 22575.0 483.0 1139.0 45946.0 2051.0 1130.0 4742.0 45316.0 8146.0 16139.0 0 0 0 c 0 0 0 0 0 5742.0 8931.0 355.0 570.0 250.0 37333.0 306.0 40279.0 431.0 7566.0 12048.0 0 0 0 g 0 0 0 0 0 11492.0 8627.0 283.0 40617.0 341.0 5573.0 836.0 711.0 507.0 9681.0 5919.0 0 0 0 t 0 0 0 0 0 16219.0 6875.0 45887.0 4682.0 471.0 2051.0 44736.0 1276.0 754.0 21615.0 12902.0 0 0 0
MA0462.2_shift5 (BATF::JUN)				; oligos_7nt_mkv5_m1 versus MA0462.2 (BATF::JUN); m=2/34; ncol2=11; w=11; offset=0; strand=D; shift=5; score=0.963578; -----waTGACTCAth--- ; cor=; Ncor= a 0 0 0 0 0 10765.0 18789.0 367.0 834.0 37280.0 1399.0 755.0 3955.0 36854.0 6299.0 13407.0 0 0 0 c 0 0 0 0 0 4762.0 7260.0 275.0 400.0 204.0 31168.0 241.0 32770.0 318.0 6105.0 9668.0 0 0 0 g 0 0 0 0 0 9317.0 6729.0 182.0 33135.0 350.0 4188.0 539.0 522.0 424.0 7745.0 4923.0 0 0 0 t 0 0 0 0 0 13310.0 5376.0 37330.0 3785.0 320.0 1399.0 36619.0 907.0 558.0 18005.0 10156.0 0 0 0
MA0835.2_shift5 (BATF3)				; oligos_7nt_mkv5_m1 versus MA0835.2 (BATF3); m=3/34; ncol2=11; w=11; offset=0; strand=D; shift=5; score=0.957372; -----waTGACTCAtw--- ; cor=; Ncor= a 0 0 0 0 0 3609.0 6137.0 132.0 245.0 11670.0 408.0 267.0 1248.0 11529.0 2334.0 4521.0 0 0 0 c 0 0 0 0 0 1245.0 2106.0 59.0 62.0 92.0 10589.0 79.0 10347.0 84.0 1664.0 2733.0 0 0 0 g 0 0 0 0 0 2608.0 1831.0 37.0 10420.0 87.0 560.0 117.0 88.0 117.0 2249.0 1255.0 0 0 0 t 0 0 0 0 0 4503.0 1891.0 11737.0 1238.0 116.0 408.0 11502.0 282.0 235.0 5718.0 3456.0 0 0 0
MA0476.1_shift5 (FOS)				; oligos_7nt_mkv5_m1 versus MA0476.1 (FOS); m=4/34; ncol2=11; w=11; offset=0; strand=D; shift=5; score=0.913078; -----dvTGAsTCATb--- ; cor=; Ncor= a 0 0 0 0 0 7879.0 7475.0 0.0 0.0 29396.0 998.0 0.0 0.0 29396.0 258.0 4006.0 0 0 0 c 0 0 0 0 0 712.0 10177.0 0.0 0.0 0.0 14079.0 0.0 29396.0 0.0 5823.0 8236.0 0 0 0 g 0 0 0 0 0 9686.0 10841.0 0.0 27108.0 0.0 11206.0 0.0 0.0 0.0 1538.0 7897.0 0 0 0 t 0 0 0 0 0 11119.0 903.0 29396.0 2288.0 0.0 3113.0 29396.0 0.0 0.0 21777.0 9257.0 0 0 0
MA1130.1_rc_shift5 (FOSL2::JUN_rc)				; oligos_7nt_mkv5_m1 versus MA1130.1_rc (FOSL2::JUN_rc); m=5/34; ncol2=12; w=11; offset=0; strand=R; shift=5; score=0.868911; -----krTGACTCAymm-- ; cor=; Ncor= a 0 0 0 0 0 209.0 589.0 1.0 1.0 998.0 58.0 29.0 158.0 998.0 55.0 269.0 268.0 0 0 c 0 0 0 0 0 180.0 93.0 1.0 1.0 1.0 698.0 1.0 840.0 1.0 282.0 338.0 295.0 0 0 g 0 0 0 0 0 341.0 299.0 0.0 979.0 1.0 141.0 123.0 1.0 1.0 121.0 179.0 248.0 0 0 t 0 0 0 0 0 269.0 19.0 998.0 20.0 1.0 103.0 847.0 1.0 1.0 542.0 214.0 189.0 0 0
MA0841.1_shift5 (NFE2)				; oligos_7nt_mkv5_m1 versus MA0841.1 (NFE2); m=6/34; ncol2=11; w=11; offset=0; strand=D; shift=5; score=0.865808; -----vATGACTCATs--- ; cor=; Ncor= a 0 0 0 0 0 5589.0 18831.0 2.0 0.0 18831.0 37.0 0.0 1.0 18831.0 0.0 487.0 0 0 0 c 0 0 0 0 0 7208.0 9.0 8.0 0.0 11.0 14360.0 20.0 18831.0 13.0 2689.0 9860.0 0 0 0 g 0 0 0 0 0 5303.0 1306.0 0.0 18831.0 0.0 4472.0 3.0 0.0 8.0 10.0 5067.0 0 0 0 t 0 0 0 0 0 731.0 5.0 18831.0 2.0 4.0 17.0 18831.0 3.0 5.0 18831.0 3417.0 0 0 0
MA0099.3_rc_shift5 (FOS::JUN_rc)				; oligos_7nt_mkv5_m1 versus MA0099.3_rc (FOS::JUN_rc); m=7/34; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.856114; -----krTGACTCAy---- ; cor=; Ncor= a 0 0 0 0 0 162.0 568.0 4.0 4.0 991.0 54.0 45.0 168.0 990.0 40.0 0 0 0 0 c 0 0 0 0 0 164.0 95.0 2.0 3.0 2.0 688.0 4.0 824.0 2.0 257.0 0 0 0 0 g 0 0 0 0 0 397.0 313.0 2.0 963.0 2.0 180.0 131.0 1.0 5.0 111.0 0 0 0 0 t 0 0 0 0 0 277.0 24.0 992.0 30.0 5.0 78.0 820.0 7.0 3.0 592.0 0 0 0 0
MA1134.1_rc_shift4 (FOS::JUNB_rc)				; oligos_7nt_mkv5_m1 versus MA1134.1_rc (FOS::JUNB_rc); m=8/34; ncol2=12; w=11; offset=-1; strand=R; shift=4; score=0.850974; ----bkrTGAsTCAym--- ; cor=; Ncor= a 0 0 0 0 156.0 184.0 658.0 1.0 1.0 996.0 25.0 4.0 131.0 998.0 36.0 286.0 0 0 0 c 0 0 0 0 256.0 178.0 51.0 1.0 1.0 3.0 618.0 1.0 868.0 1.0 267.0 372.0 0 0 0 g 0 0 0 0 304.0 363.0 284.0 1.0 971.0 1.0 309.0 30.0 1.0 1.0 105.0 168.0 0 0 0 t 0 0 0 0 283.0 275.0 7.0 998.0 27.0 1.0 48.0 965.0 1.0 1.0 593.0 174.0 0 0 0
MA1135.1_shift5 (FOSB::JUNB)				; oligos_7nt_mkv5_m1 versus MA1135.1 (FOSB::JUNB); m=9/34; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.845263; -----krTGAsTCAy---- ; cor=; Ncor= a 0 0 0 0 0 119.0 598.0 1.0 1.0 997.0 34.0 2.0 191.0 998.0 37.0 0 0 0 0 c 0 0 0 0 0 182.0 61.0 0.0 0.0 1.0 596.0 1.0 808.0 0.0 259.0 0 0 0 0 g 0 0 0 0 0 429.0 321.0 1.0 980.0 1.0 309.0 39.0 1.0 1.0 126.0 0 0 0 0 t 0 0 0 0 0 270.0 20.0 998.0 19.0 1.0 61.0 958.0 1.0 1.0 578.0 0 0 0 0
MA1144.1_shift5 (FOSL2::JUND)				; oligos_7nt_mkv5_m1 versus MA1144.1 (FOSL2::JUND); m=10/34; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.84498; -----krTGAsTCAy---- ; cor=; Ncor= a 0 0 0 0 0 137.0 634.0 0.0 0.0 998.0 46.0 6.0 140.0 999.0 38.0 0 0 0 0 c 0 0 0 0 0 143.0 60.0 0.0 0.0 1.0 604.0 0.0 860.0 0.0 266.0 0 0 0 0 g 0 0 0 0 0 446.0 291.0 0.0 990.0 0.0 292.0 60.0 0.0 0.0 113.0 0 0 0 0 t 0 0 0 0 0 275.0 14.0 999.0 10.0 0.0 58.0 934.0 0.0 0.0 583.0 0 0 0 0
MA1138.1_shift5 (FOSL2::JUNB)				; oligos_7nt_mkv5_m1 versus MA1138.1 (FOSL2::JUNB); m=11/34; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.841706; -----krTGAsTCAy---- ; cor=; Ncor= a 0 0 0 0 0 151.0 621.0 0.0 0.0 999.0 54.0 1.0 168.0 999.0 35.0 0 0 0 0 c 0 0 0 0 0 164.0 53.0 0.0 0.0 0.0 568.0 0.0 831.0 0.0 251.0 0 0 0 0 g 0 0 0 0 0 407.0 314.0 0.0 985.0 0.0 292.0 26.0 0.0 0.0 112.0 0 0 0 0 t 0 0 0 0 0 277.0 13.0 999.0 14.0 0.0 85.0 973.0 0.0 0.0 602.0 0 0 0 0
MA1142.1_shift5 (FOSL1::JUND)				; oligos_7nt_mkv5_m1 versus MA1142.1 (FOSL1::JUND); m=12/34; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.838578; -----rrTGActmAt---- ; cor=; Ncor= a 0 0 0 0 0 265.0 551.0 30.0 22.0 864.0 49.0 98.0 270.0 912.0 174.0 0 0 0 0 c 0 0 0 0 0 221.0 127.0 23.0 61.0 12.0 581.0 45.0 641.0 40.0 212.0 0 0 0 0 g 0 0 0 0 0 279.0 282.0 34.0 777.0 82.0 191.0 187.0 25.0 17.0 144.0 0 0 0 0 t 0 0 0 0 0 235.0 40.0 913.0 140.0 41.0 180.0 669.0 64.0 31.0 470.0 0 0 0 0
MA1132.1_shift5 (JUN::JUNB)				; oligos_7nt_mkv5_m1 versus MA1132.1 (JUN::JUNB); m=13/34; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.830651; -----kaTGACkCAt---- ; cor=; Ncor= a 0 0 0 0 0 203.0 627.0 11.0 10.0 944.0 27.0 58.0 161.0 931.0 188.0 0 0 0 0 c 0 0 0 0 0 128.0 134.0 10.0 21.0 10.0 826.0 24.0 707.0 24.0 248.0 0 0 0 0 g 0 0 0 0 0 408.0 189.0 34.0 921.0 28.0 115.0 353.0 10.0 18.0 64.0 0 0 0 0 t 0 0 0 0 0 261.0 50.0 946.0 47.0 18.0 33.0 565.0 122.0 27.0 500.0 0 0 0 0
MA1141.1_rc_shift4 (FOS::JUND_rc)				; oligos_7nt_mkv5_m1 versus MA1141.1_rc (FOS::JUND_rc); m=14/34; ncol2=13; w=11; offset=-1; strand=R; shift=4; score=0.80636; ----bkrTGACTCAymm-- ; cor=; Ncor= a 0 0 0 0 180.0 185.0 612.0 0.0 0.0 999.0 19.0 15.0 129.0 999.0 38.0 263.0 258.0 0 0 c 0 0 0 0 292.0 195.0 77.0 0.0 0.0 0.0 867.0 0.0 871.0 0.0 266.0 389.0 315.0 0 0 g 0 0 0 0 264.0 370.0 290.0 0.0 970.0 0.0 40.0 91.0 0.0 1.0 104.0 167.0 244.0 0 0 t 0 0 0 0 264.0 250.0 21.0 999.0 29.0 0.0 75.0 894.0 0.0 0.0 593.0 182.0 183.0 0 0
MA1128.1_shift4 (FOSL1::JUN)				; oligos_7nt_mkv5_m1 versus MA1128.1 (FOSL1::JUN); m=15/34; ncol2=13; w=11; offset=-1; strand=D; shift=4; score=0.803233; ----kkrTGACTCAtmm-- ; cor=; Ncor= a 0 0 0 0 208.0 172.0 602.0 1.0 3.0 994.0 26.0 33.0 159.0 984.0 57.0 296.0 277.0 0 0 c 0 0 0 0 246.0 159.0 89.0 2.0 2.0 2.0 826.0 2.0 835.0 4.0 245.0 308.0 289.0 0 0 g 0 0 0 0 253.0 380.0 283.0 1.0 957.0 2.0 51.0 140.0 2.0 9.0 119.0 173.0 237.0 0 0 t 0 0 0 0 293.0 289.0 26.0 996.0 38.0 3.0 97.0 826.0 4.0 4.0 579.0 223.0 196.0 0 0
MA0477.2_shift4 (FOSL1)				; oligos_7nt_mkv5_m1 versus MA0477.2 (FOSL1); m=16/34; ncol2=13; w=11; offset=-1; strand=D; shift=4; score=0.799885; ----draTGACTCAthy-- ; cor=; Ncor= a 0 0 0 0 14979.0 15921.0 35056.0 260.0 515.0 56806.0 2557.0 1060.0 3133.0 56408.0 2716.0 14671.0 13956.0 0 0 c 0 0 0 0 12491.0 11018.0 6703.0 460.0 301.0 287.0 43918.0 163.0 53711.0 344.0 10399.0 15640.0 17637.0 0 0 g 0 0 0 0 14848.0 16855.0 13127.0 183.0 54619.0 286.0 8615.0 598.0 278.0 566.0 6533.0 12314.0 11065.0 0 0 t 0 0 0 0 15363.0 13887.0 2795.0 56778.0 2246.0 302.0 2591.0 55860.0 559.0 363.0 38033.0 15056.0 15023.0 0 0
MA0478.1_shift4 (FOSL2)				; oligos_7nt_mkv5_m1 versus MA0478.1 (FOSL2); m=17/34; ncol2=11; w=10; offset=-1; strand=D; shift=4; score=0.789177; ----krrTGAsTCAb---- ; cor=; Ncor= a 0 0 0 0 833.0 1525.0 2861.0 0.0 0.0 5075.0 0.0 0.0 205.0 5318.0 0.0 0 0 0 0 c 0 0 0 0 994.0 592.0 55.0 0.0 0.0 51.0 3286.0 0.0 5113.0 0.0 1399.0 0 0 0 0 g 0 0 0 0 2086.0 2707.0 2328.0 0.0 5318.0 192.0 1838.0 0.0 0.0 0.0 1933.0 0 0 0 0 t 0 0 0 0 1405.0 494.0 74.0 5318.0 0.0 0.0 194.0 5318.0 0.0 0.0 1986.0 0 0 0 0
MA1137.1_shift4 (FOSL1::JUNB)				; oligos_7nt_mkv5_m1 versus MA1137.1 (FOSL1::JUNB); m=18/34; ncol2=13; w=11; offset=-1; strand=D; shift=4; score=0.788654; ----ykrTGAcTMAtmc-- ; cor=; Ncor= a 0 0 0 0 237.0 216.0 566.0 23.0 36.0 917.0 63.0 59.0 271.0 904.0 53.0 300.0 247.0 0 0 c 0 0 0 0 269.0 146.0 100.0 16.0 21.0 20.0 626.0 23.0 683.0 21.0 225.0 298.0 300.0 0 0 g 0 0 0 0 195.0 376.0 287.0 16.0 880.0 21.0 198.0 115.0 9.0 38.0 170.0 204.0 223.0 0 0 t 0 0 0 0 300.0 263.0 47.0 945.0 63.0 42.0 113.0 803.0 37.0 37.0 552.0 198.0 230.0 0 0
MA0490.2_shift4 (JUNB)				; oligos_7nt_mkv5_m1 versus MA0490.2 (JUNB); m=19/34; ncol2=13; w=11; offset=-1; strand=D; shift=4; score=0.778146; ----wdATGACTCATwh-- ; cor=; Ncor= a 0 0 0 0 22772.0 23561.0 56607.0 538.0 770.0 78101.0 4755.0 1999.0 5243.0 77675.0 3722.0 21544.0 21137.0 0 0 c 0 0 0 0 16583.0 15807.0 7817.0 654.0 550.0 523.0 59784.0 289.0 73199.0 588.0 8876.0 19230.0 20653.0 0 0 g 0 0 0 0 18150.0 20403.0 11566.0 322.0 74757.0 550.0 10519.0 913.0 617.0 900.0 7508.0 16491.0 15068.0 0 0 t 0 0 0 0 22351.0 20085.0 3866.0 78342.0 3779.0 682.0 4798.0 76655.0 797.0 693.0 59750.0 22591.0 22998.0 0 0
MA0491.2_shift4 (JUND)				; oligos_7nt_mkv5_m1 versus MA0491.2 (JUND); m=20/34; ncol2=13; w=11; offset=-1; strand=D; shift=4; score=0.777906; ----wraTGACTCAThh-- ; cor=; Ncor= a 0 0 0 0 28467.0 29234.0 70166.0 644.0 1365.0 103797.0 4634.0 2053.0 4915.0 103420.0 2796.0 27969.0 28212.0 0 0 c 0 0 0 0 21965.0 19712.0 10173.0 757.0 873.0 650.0 76028.0 496.0 98628.0 751.0 12025.0 28250.0 29793.0 0 0 g 0 0 0 0 25006.0 31347.0 20586.0 443.0 99787.0 573.0 20633.0 1147.0 953.0 965.0 7908.0 22249.0 19236.0 0 0 t 0 0 0 0 30507.0 25652.0 5020.0 104101.0 3920.0 925.0 4650.0 102249.0 1449.0 809.0 83216.0 27477.0 28704.0 0 0
MA1633.1_shift5 (BACH1)				; oligos_7nt_mkv5_m1 versus MA1633.1 (BACH1); m=21/34; ncol2=13; w=11; offset=0; strand=D; shift=5; score=0.777344; -----saTGACTCAGCaw- ; cor=; Ncor= a 0 0 0 0 0 3257.0 6929.0 105.0 97.0 15046.0 443.0 650.0 576.0 14778.0 339.0 769.0 8799.0 4492.0 0 c 0 0 0 0 0 3946.0 3833.0 267.0 149.0 230.0 12597.0 220.0 14563.0 194.0 623.0 13382.0 2167.0 3574.0 0 g 0 0 0 0 0 4835.0 3848.0 149.0 14831.0 167.0 2083.0 266.0 178.0 310.0 13050.0 858.0 1971.0 3553.0 0 t 0 0 0 0 0 3519.0 947.0 15036.0 480.0 114.0 434.0 14421.0 240.0 275.0 1545.0 548.0 2620.0 3938.0 0
MA1622.1_shift3 (Smad2::Smad3)				; oligos_7nt_mkv5_m1 versus MA1622.1 (Smad2::Smad3); m=22/34; ncol2=14; w=11; offset=-2; strand=D; shift=3; score=0.761488; ---rtkrTGACTCAtwm-- ; cor=; Ncor= a 0 0 0 2995.0 2508.0 2499.0 4451.0 79.0 90.0 10141.0 627.0 247.0 711.0 10056.0 683.0 2948.0 2746.0 0 0 c 0 0 0 2254.0 2515.0 1642.0 2212.0 59.0 82.0 44.0 7480.0 53.0 9443.0 85.0 2047.0 2479.0 2595.0 0 0 g 0 0 0 2615.0 2324.0 3479.0 2888.0 56.0 9768.0 58.0 1542.0 68.0 90.0 79.0 1979.0 2154.0 2524.0 0 0 t 0 0 0 2481.0 2998.0 2725.0 794.0 10151.0 405.0 102.0 696.0 9977.0 101.0 125.0 5636.0 2764.0 2480.0 0 0
MA0655.1_shift6 (JDP2)				; oligos_7nt_mkv5_m1 versus MA0655.1 (JDP2); m=23/34; ncol2=9; w=9; offset=1; strand=D; shift=6; score=0.726272; ------ATGASTCAT---- ; cor=; Ncor= a 0 0 0 0 0 0 1634.0 5.0 0.0 1634.0 14.0 6.0 22.0 1634.0 22.0 0 0 0 0 c 0 0 0 0 0 0 19.0 6.0 3.0 1.0 1200.0 0.0 1634.0 0.0 404.0 0 0 0 0 g 0 0 0 0 0 0 140.0 1.0 1634.0 2.0 434.0 6.0 3.0 0.0 5.0 0 0 0 0 t 0 0 0 0 0 0 8.0 1634.0 22.0 25.0 13.0 1634.0 9.0 7.0 1634.0 0 0 0 0
MA0496.3_shift4 (MAFK)				; oligos_7nt_mkv5_m1 versus MA0496.3 (MAFK); m=24/34; ncol2=15; w=11; offset=-1; strand=D; shift=4; score=0.663411; ----tgmTGACTCAGCmww ; cor=; Ncor= a 0 0 0 0 11946.0 9602.0 14089.0 1616.0 1108.0 47484.0 2492.0 2722.0 1818.0 47675.0 1439.0 2664.0 24802.0 15933.0 14818.0 c 0 0 0 0 10789.0 10655.0 27000.0 1568.0 1366.0 1670.0 39125.0 1133.0 47872.0 882.0 1921.0 43458.0 14138.0 10737.0 9756.0 g 0 0 0 0 9969.0 21904.0 6706.0 1058.0 46695.0 1306.0 7573.0 1081.0 957.0 1267.0 44013.0 3327.0 4590.0 10512.0 8541.0 t 0 0 0 0 19030.0 9573.0 3939.0 47492.0 2565.0 1274.0 2544.0 46798.0 1087.0 1910.0 4361.0 2285.0 8204.0 14552.0 18619.0
MA0591.1_shift3 (Bach1::Mafk)				; oligos_7nt_mkv5_m1 versus MA0591.1 (Bach1::Mafk); m=25/34; ncol2=15; w=11; offset=-2; strand=D; shift=3; score=0.639389; ---rssrTGACTCAGCAs- ; cor=; Ncor= a 0 0 0 45.0 14.0 15.0 66.0 2.0 0.0 113.0 0.0 1.0 5.0 108.0 0.0 0.0 98.0 12.0 0 c 0 0 0 14.0 36.0 41.0 16.0 1.0 0.0 0.0 94.0 0.0 107.0 1.0 1.0 114.0 4.0 42.0 0 g 0 0 0 41.0 46.0 54.0 32.0 0.0 107.0 0.0 20.0 4.0 2.0 3.0 113.0 0.0 6.0 38.0 0 t 0 0 0 14.0 18.0 4.0 0.0 111.0 7.0 1.0 0.0 109.0 0.0 2.0 0.0 0.0 6.0 22.0 0
MA0489.1_shift1 (JUN(var.2))				; oligos_7nt_mkv5_m1 versus MA0489.1 (JUN(var.2)); m=26/34; ncol2=14; w=10; offset=-4; strand=D; shift=1; score=0.622873; -rrrrrrTGAsTCAt---- ; cor=; Ncor= a 0 4852.0 3927.0 3726.0 4396.0 4146.0 5930.0 0.0 0.0 10953.0 382.0 199.0 956.0 10956.0 376.0 0 0 0 0 c 0 1250.0 1324.0 1127.0 1122.0 593.0 993.0 0.0 0.0 0.0 5704.0 0.0 10000.0 0.0 2509.0 0 0 0 0 g 0 2818.0 4110.0 4330.0 3461.0 4213.0 4033.0 0.0 10956.0 0.0 4090.0 0.0 0.0 0.0 2645.0 0 0 0 0 t 0 2036.0 1595.0 1773.0 1977.0 2004.0 0.0 10956.0 0.0 3.0 780.0 10757.0 0.0 0.0 5426.0 0 0 0 0
MA0150.2_shift2 (Nfe2l2)				; oligos_7nt_mkv5_m1 versus MA0150.2 (Nfe2l2); m=27/34; ncol2=15; w=11; offset=-3; strand=D; shift=2; score=0.619602; --casmrTGACTCAGCA-- ; cor=; Ncor= a 0 0 166.0 401.0 118.0 203.0 488.0 0.0 0.0 726.0 20.0 84.0 65.0 577.0 10.0 4.0 623.0 0 0 c 0 0 338.0 78.0 239.0 247.0 28.0 0.0 0.0 0.0 533.0 20.0 549.0 3.0 11.0 699.0 26.0 0 0 g 0 0 109.0 159.0 275.0 152.0 205.0 0.0 711.0 0.0 118.0 16.0 46.0 90.0 698.0 19.0 31.0 0 0 t 0 0 113.0 88.0 94.0 124.0 5.0 726.0 15.0 0.0 55.0 606.0 66.0 56.0 7.0 4.0 46.0 0 0
MA0089.2_shift3 (NFE2L1)				; oligos_7nt_mkv5_m1 versus MA0089.2 (NFE2L1); m=28/34; ncol2=16; w=11; offset=-2; strand=D; shift=3; score=0.600484; ---avmATGACTCAGCAaw ; cor=; Ncor= a 0 0 0 1244.0 878.0 992.0 2582.0 12.0 17.0 3336.0 51.0 218.0 185.0 3171.0 57.0 16.0 2857.0 1362.0 1145.0 c 0 0 0 703.0 946.0 853.0 57.0 5.0 7.0 4.0 2864.0 12.0 3049.0 9.0 18.0 3281.0 64.0 517.0 224.0 g 0 0 0 671.0 1050.0 742.0 706.0 2.0 3308.0 10.0 358.0 35.0 25.0 78.0 3018.0 33.0 142.0 694.0 305.0 t 0 0 0 738.0 482.0 769.0 11.0 3337.0 24.0 6.0 83.0 3091.0 97.0 98.0 263.0 26.0 293.0 783.0 1682.0
MA0501.1_shift6 (MAF::NFE2)				; oligos_7nt_mkv5_m1 versus MA0501.1 (MAF::NFE2); m=29/34; ncol2=15; w=10; offset=1; strand=D; shift=6; score=0.543468; ------rTGACTCAGCArw ; cor=; Ncor= a 0 0 0 0 0 0 726.0 0.0 0.0 1090.0 16.0 110.0 80.0 978.0 8.0 0.0 931.0 383.0 361.0 c 0 0 0 0 0 0 26.0 0.0 0.0 0.0 871.0 1.0 937.0 0.0 4.0 1063.0 17.0 203.0 100.0 g 0 0 0 0 0 0 334.0 0.0 1082.0 0.0 166.0 12.0 22.0 51.0 1041.0 22.0 73.0 283.0 130.0 t 0 0 0 0 0 0 4.0 1090.0 8.0 0.0 37.0 967.0 51.0 61.0 37.0 5.0 69.0 221.0 499.0
MA1521.1_rc_shift3 (MAFA_rc)				; oligos_7nt_mkv5_m1 versus MA1521.1_rc (MAFA_rc); m=30/34; ncol2=15; w=11; offset=-2; strand=R; shift=3; score=0.519709; ---dtGCTGAsTCAGCAh- ; cor=; Ncor= a 0 0 0 2340.0 802.0 258.0 973.0 1123.0 715.0 7524.0 657.0 1231.0 1291.0 8138.0 540.0 119.0 6277.0 2475.0 0 c 0 0 0 1532.0 1956.0 221.0 7957.0 889.0 422.0 1781.0 4024.0 317.0 8028.0 451.0 185.0 8343.0 316.0 2152.0 0 g 0 0 0 2126.0 223.0 8371.0 104.0 453.0 7985.0 240.0 3985.0 1615.0 475.0 986.0 7939.0 206.0 1857.0 1563.0 0 t 0 0 0 2465.0 6132.0 26.0 473.0 8128.0 1204.0 1281.0 602.0 7498.0 668.0 973.0 970.0 304.0 673.0 2273.0 0
MA1520.1_rc_shift3 (MAF_rc)				; oligos_7nt_mkv5_m1 versus MA1520.1_rc (MAF_rc); m=31/34; ncol2=15; w=11; offset=-2; strand=R; shift=3; score=0.517751; ---wTGCTGAsTCAGCAw- ; cor=; Ncor= a 0 0 0 955.0 210.0 66.0 329.0 359.0 301.0 2715.0 344.0 432.0 682.0 2859.0 219.0 8.0 2397.0 922.0 0 c 0 0 0 486.0 562.0 56.0 2821.0 314.0 156.0 404.0 1431.0 116.0 2739.0 116.0 53.0 2938.0 51.0 587.0 0 g 0 0 0 575.0 72.0 2964.0 51.0 103.0 2776.0 89.0 1277.0 343.0 185.0 243.0 2837.0 45.0 516.0 516.0 0 t 0 0 0 977.0 2353.0 48.0 216.0 2904.0 609.0 529.0 387.0 2712.0 316.0 439.0 364.0 80.0 213.0 968.0 0
MA1101.2_shift1 (BACH2)				; oligos_7nt_mkv5_m1 versus MA1101.2 (BACH2); m=32/34; ncol2=19; w=11; offset=-4; strand=D; shift=1; score=0.486793; -awasCATGAsTCATsvtw ; cor=; Ncor= a 0 26746.0 38327.0 59307.0 12404.0 9369.0 62993.0 1.0 6.0 67846.0 50.0 3.0 115.0 68264.0 47.0 4522.0 19650.0 18457.0 23586.0 c 0 12203.0 8823.0 5534.0 21218.0 61580.0 260.0 7.0 0.0 1088.0 37438.0 20.0 68215.0 2.0 11634.0 35220.0 17682.0 13438.0 10703.0 g 0 13720.0 9605.0 8490.0 21257.0 6727.0 15304.0 1.0 68240.0 13.0 30785.0 856.0 0.0 11.0 2028.0 30498.0 19155.0 7650.0 8221.0 t 0 15601.0 24469.0 15405.0 13391.0 8116.0 0.0 68266.0 54.0 6.0 18.0 67975.0 3.0 0.0 63746.0 5274.0 11783.0 54749.0 39012.0
MA0067.1_rc_shift4 (Pax2_rc)				; oligos_7nt_mkv5_m1 versus MA0067.1_rc (Pax2_rc); m=33/34; ncol2=8; w=7; offset=-1; strand=R; shift=4; score=0.474397; ----vmrTGAcw------- ; cor=; Ncor= a 0 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 0 0 0 0 0 c 0 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 0 0 0 0 0 g 0 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 0 0 0 0 0 t 0 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0 0 0 0 0 0
MA1114.1_rc_shift0 (PBX3_rc)				; oligos_7nt_mkv5_m1 versus MA1114.1_rc (PBX3_rc); m=34/34; ncol2=17; w=11; offset=-5; strand=R; shift=0; score=0.455784; sygcCTGTCACTCAvmc-- ; cor=; Ncor= a 1508.0 1465.0 1525.0 683.0 549.0 376.0 138.0 145.0 83.0 6290.0 969.0 256.0 160.0 5697.0 1924.0 1853.0 1523.0 0 0 c 2217.0 2068.0 1591.0 4077.0 5691.0 425.0 209.0 604.0 6550.0 285.0 4929.0 214.0 6406.0 503.0 1928.0 1934.0 2192.0 0 0 g 1801.0 1619.0 2654.0 1377.0 412.0 129.0 6524.0 108.0 242.0 199.0 788.0 125.0 227.0 225.0 1849.0 1724.0 1711.0 0 0 t 1495.0 1869.0 1251.0 884.0 369.0 6091.0 150.0 6164.0 146.0 247.0 335.0 6426.0 228.0 596.0 1320.0 1510.0 1595.0 0 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m29_shift5 ; 35 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m29_shift5 (oligos_6nt_mkv4_m29oligos_6nt_mkv4_m29)				; oligos_6nt_mkv4_m29 (oligos_6nt_mkv4_m29oligos_6nt_mkv4_m29); m=0 (reference); ncol1=11; shift=5; ncol=19; -----ksTGAGTCAsm--- ; Alignment reference a 0 0 0 0 0 719 854 1 29 3705 13 0 52 3721 212 951 0 0 0 c 0 0 0 0 0 889 1372 45 3 17 13 0 3654 2 1483 1212 0 0 0 g 0 0 0 0 0 1136 1152 13 3642 9 3692 0 6 8 1126 799 0 0 0 t 0 0 0 0 0 987 353 3672 57 0 13 3731 19 0 910 769 0 0 0
MA1634.1_rc_shift5 (BATF_rc)				; oligos_6nt_mkv4_m29 versus MA1634.1_rc (BATF_rc); m=1/34; ncol2=11; w=11; offset=0; strand=R; shift=5; score=0.96327; -----daTGAGTCAtw--- ; cor=; Ncor= a 0 0 0 0 0 12902.0 21615.0 754.0 1276.0 44736.0 2051.0 471.0 4682.0 45887.0 6875.0 16219.0 0 0 0 c 0 0 0 0 0 5919.0 9681.0 507.0 711.0 836.0 5573.0 341.0 40617.0 283.0 8627.0 11492.0 0 0 0 g 0 0 0 0 0 12048.0 7566.0 431.0 40279.0 306.0 37333.0 250.0 570.0 355.0 8931.0 5742.0 0 0 0 t 0 0 0 0 0 16139.0 8146.0 45316.0 4742.0 1130.0 2051.0 45946.0 1139.0 483.0 22575.0 13555.0 0 0 0
MA0462.2_rc_shift5 (BATF::JUN_rc)				; oligos_6nt_mkv4_m29 versus MA0462.2_rc (BATF::JUN_rc); m=2/34; ncol2=11; w=11; offset=0; strand=R; shift=5; score=0.962935; -----daTGAGTCAtw--- ; cor=; Ncor= a 0 0 0 0 0 10156.0 18005.0 558.0 907.0 36619.0 1399.0 320.0 3785.0 37330.0 5376.0 13310.0 0 0 0 c 0 0 0 0 0 4923.0 7745.0 424.0 522.0 539.0 4188.0 350.0 33135.0 182.0 6729.0 9317.0 0 0 0 g 0 0 0 0 0 9668.0 6105.0 318.0 32770.0 241.0 31168.0 204.0 400.0 275.0 7260.0 4762.0 0 0 0 t 0 0 0 0 0 13407.0 6299.0 36854.0 3955.0 755.0 1399.0 37280.0 834.0 367.0 18789.0 10765.0 0 0 0
MA0835.2_rc_shift5 (BATF3_rc)				; oligos_6nt_mkv4_m29 versus MA0835.2_rc (BATF3_rc); m=3/34; ncol2=11; w=11; offset=0; strand=R; shift=5; score=0.956701; -----waTGAGTCAtw--- ; cor=; Ncor= a 0 0 0 0 0 3456.0 5718.0 235.0 282.0 11502.0 408.0 116.0 1238.0 11737.0 1891.0 4503.0 0 0 0 c 0 0 0 0 0 1255.0 2249.0 117.0 88.0 117.0 560.0 87.0 10420.0 37.0 1831.0 2608.0 0 0 0 g 0 0 0 0 0 2733.0 1664.0 84.0 10347.0 79.0 10589.0 92.0 62.0 59.0 2106.0 1245.0 0 0 0 t 0 0 0 0 0 4521.0 2334.0 11529.0 1248.0 267.0 408.0 11670.0 245.0 132.0 6137.0 3609.0 0 0 0
MA0476.1_rc_shift5 (FOS_rc)				; oligos_6nt_mkv4_m29 versus MA0476.1_rc (FOS_rc); m=4/34; ncol2=11; w=11; offset=0; strand=R; shift=5; score=0.912396; -----vATGAsTCAbh--- ; cor=; Ncor= a 0 0 0 0 0 9257.0 21777.0 0.0 0.0 29396.0 3113.0 0.0 2288.0 29396.0 903.0 11119.0 0 0 0 c 0 0 0 0 0 7897.0 1538.0 0.0 0.0 0.0 11206.0 0.0 27108.0 0.0 10841.0 9686.0 0 0 0 g 0 0 0 0 0 8236.0 5823.0 0.0 29396.0 0.0 14079.0 0.0 0.0 0.0 10177.0 712.0 0 0 0 t 0 0 0 0 0 4006.0 258.0 29396.0 0.0 0.0 998.0 29396.0 0.0 0.0 7475.0 7879.0 0 0 0
MA1130.1_shift4 (FOSL2::JUN)				; oligos_6nt_mkv4_m29 versus MA1130.1 (FOSL2::JUN); m=5/34; ncol2=12; w=11; offset=-1; strand=D; shift=4; score=0.868511; ----kkrTGAGTCAym--- ; cor=; Ncor= a 0 0 0 0 189.0 214.0 542.0 1.0 1.0 847.0 103.0 1.0 20.0 998.0 19.0 269.0 0 0 0 c 0 0 0 0 248.0 179.0 121.0 1.0 1.0 123.0 141.0 1.0 979.0 0.0 299.0 341.0 0 0 0 g 0 0 0 0 295.0 338.0 282.0 1.0 840.0 1.0 698.0 1.0 1.0 1.0 93.0 180.0 0 0 0 t 0 0 0 0 268.0 269.0 55.0 998.0 158.0 29.0 58.0 998.0 1.0 1.0 589.0 209.0 0 0 0
MA0841.1_rc_shift5 (NFE2_rc)				; oligos_6nt_mkv4_m29 versus MA0841.1_rc (NFE2_rc); m=6/34; ncol2=11; w=11; offset=0; strand=R; shift=5; score=0.865643; -----sATGAGTCATb--- ; cor=; Ncor= a 0 0 0 0 0 3417.0 18831.0 5.0 3.0 18831.0 17.0 4.0 2.0 18831.0 5.0 731.0 0 0 0 c 0 0 0 0 0 5067.0 10.0 8.0 0.0 3.0 4472.0 0.0 18831.0 0.0 1306.0 5303.0 0 0 0 g 0 0 0 0 0 9860.0 2689.0 13.0 18831.0 20.0 14360.0 11.0 0.0 8.0 9.0 7208.0 0 0 0 t 0 0 0 0 0 487.0 0.0 18831.0 1.0 0.0 37.0 18831.0 0.0 2.0 18831.0 5589.0 0 0 0
MA0099.3_shift6 (FOS::JUN)				; oligos_6nt_mkv4_m29 versus MA0099.3 (FOS::JUN); m=7/34; ncol2=10; w=10; offset=1; strand=D; shift=6; score=0.855698; ------rTGAGTCAym--- ; cor=; Ncor= a 0 0 0 0 0 0 592.0 3.0 7.0 820.0 78.0 5.0 30.0 992.0 24.0 277.0 0 0 0 c 0 0 0 0 0 0 111.0 5.0 1.0 131.0 180.0 2.0 963.0 2.0 313.0 397.0 0 0 0 g 0 0 0 0 0 0 257.0 2.0 824.0 4.0 688.0 2.0 3.0 2.0 95.0 164.0 0 0 0 t 0 0 0 0 0 0 40.0 990.0 168.0 45.0 54.0 991.0 4.0 4.0 568.0 162.0 0 0 0
MA1134.1_shift5 (FOS::JUNB)				; oligos_6nt_mkv4_m29 versus MA1134.1 (FOS::JUNB); m=8/34; ncol2=12; w=11; offset=0; strand=D; shift=5; score= 0.8506; -----krTGAsTCAymv-- ; cor=; Ncor= a 0 0 0 0 0 174.0 593.0 1.0 1.0 965.0 48.0 1.0 27.0 998.0 7.0 275.0 283.0 0 0 c 0 0 0 0 0 168.0 105.0 1.0 1.0 30.0 309.0 1.0 971.0 1.0 284.0 363.0 304.0 0 0 g 0 0 0 0 0 372.0 267.0 1.0 868.0 1.0 618.0 3.0 1.0 1.0 51.0 178.0 256.0 0 0 t 0 0 0 0 0 286.0 36.0 998.0 131.0 4.0 25.0 996.0 1.0 1.0 658.0 184.0 156.0 0 0
MA1135.1_rc_shift6 (FOSB::JUNB_rc)				; oligos_6nt_mkv4_m29 versus MA1135.1_rc (FOSB::JUNB_rc); m=9/34; ncol2=10; w=10; offset=1; strand=R; shift=6; score=0.844911; ------rTGAsTCAym--- ; cor=; Ncor= a 0 0 0 0 0 0 578.0 1.0 1.0 958.0 61.0 1.0 19.0 998.0 20.0 270.0 0 0 0 c 0 0 0 0 0 0 126.0 1.0 1.0 39.0 309.0 1.0 980.0 1.0 321.0 429.0 0 0 0 g 0 0 0 0 0 0 259.0 0.0 808.0 1.0 596.0 1.0 0.0 0.0 61.0 182.0 0 0 0 t 0 0 0 0 0 0 37.0 998.0 191.0 2.0 34.0 997.0 1.0 1.0 598.0 119.0 0 0 0
MA1144.1_rc_shift6 (FOSL2::JUND_rc)				; oligos_6nt_mkv4_m29 versus MA1144.1_rc (FOSL2::JUND_rc); m=10/34; ncol2=10; w=10; offset=1; strand=R; shift=6; score=0.844588; ------rTGAsTCAym--- ; cor=; Ncor= a 0 0 0 0 0 0 583.0 0.0 0.0 934.0 58.0 0.0 10.0 999.0 14.0 275.0 0 0 0 c 0 0 0 0 0 0 113.0 0.0 0.0 60.0 292.0 0.0 990.0 0.0 291.0 446.0 0 0 0 g 0 0 0 0 0 0 266.0 0.0 860.0 0.0 604.0 1.0 0.0 0.0 60.0 143.0 0 0 0 t 0 0 0 0 0 0 38.0 999.0 140.0 6.0 46.0 998.0 0.0 0.0 634.0 137.0 0 0 0
MA1138.1_rc_shift6 (FOSL2::JUNB_rc)				; oligos_6nt_mkv4_m29 versus MA1138.1_rc (FOSL2::JUNB_rc); m=11/34; ncol2=10; w=10; offset=1; strand=R; shift=6; score=0.841329; ------rTGAsTCAym--- ; cor=; Ncor= a 0 0 0 0 0 0 602.0 0.0 0.0 973.0 85.0 0.0 14.0 999.0 13.0 277.0 0 0 0 c 0 0 0 0 0 0 112.0 0.0 0.0 26.0 292.0 0.0 985.0 0.0 314.0 407.0 0 0 0 g 0 0 0 0 0 0 251.0 0.0 831.0 0.0 568.0 0.0 0.0 0.0 53.0 164.0 0 0 0 t 0 0 0 0 0 0 35.0 999.0 168.0 1.0 54.0 999.0 0.0 0.0 621.0 151.0 0 0 0
MA1142.1_rc_shift6 (FOSL1::JUND_rc)				; oligos_6nt_mkv4_m29 versus MA1142.1_rc (FOSL1::JUND_rc); m=12/34; ncol2=10; w=10; offset=1; strand=R; shift=6; score=0.837917; ------aTkagTCAyy--- ; cor=; Ncor= a 0 0 0 0 0 0 470.0 31.0 64.0 669.0 180.0 41.0 140.0 913.0 40.0 235.0 0 0 0 c 0 0 0 0 0 0 144.0 17.0 25.0 187.0 191.0 82.0 777.0 34.0 282.0 279.0 0 0 0 g 0 0 0 0 0 0 212.0 40.0 641.0 45.0 581.0 12.0 61.0 23.0 127.0 221.0 0 0 0 t 0 0 0 0 0 0 174.0 912.0 270.0 98.0 49.0 864.0 22.0 30.0 551.0 265.0 0 0 0
MA1132.1_rc_shift6 (JUN::JUNB_rc)				; oligos_6nt_mkv4_m29 versus MA1132.1_rc (JUN::JUNB_rc); m=13/34; ncol2=10; w=10; offset=1; strand=R; shift=6; score=0.830069; ------aTGmGTCAtm--- ; cor=; Ncor= a 0 0 0 0 0 0 500.0 27.0 122.0 565.0 33.0 18.0 47.0 946.0 50.0 261.0 0 0 0 c 0 0 0 0 0 0 64.0 18.0 10.0 353.0 115.0 28.0 921.0 34.0 189.0 408.0 0 0 0 g 0 0 0 0 0 0 248.0 24.0 707.0 24.0 826.0 10.0 21.0 10.0 134.0 128.0 0 0 0 t 0 0 0 0 0 0 188.0 931.0 161.0 58.0 27.0 944.0 10.0 11.0 627.0 203.0 0 0 0
MA1141.1_shift4 (FOS::JUND)				; oligos_6nt_mkv4_m29 versus MA1141.1 (FOS::JUND); m=14/34; ncol2=13; w=11; offset=-1; strand=D; shift=4; score=0.806096; ----kkrTGAGTCAymv-- ; cor=; Ncor= a 0 0 0 0 183.0 182.0 593.0 0.0 0.0 894.0 75.0 0.0 29.0 999.0 21.0 250.0 264.0 0 0 c 0 0 0 0 244.0 167.0 104.0 1.0 0.0 91.0 40.0 0.0 970.0 0.0 290.0 370.0 264.0 0 0 g 0 0 0 0 315.0 389.0 266.0 0.0 871.0 0.0 867.0 0.0 0.0 0.0 77.0 195.0 292.0 0 0 t 0 0 0 0 258.0 263.0 38.0 999.0 129.0 15.0 19.0 999.0 0.0 0.0 612.0 185.0 180.0 0 0
MA1128.1_rc_shift4 (FOSL1::JUN_rc)				; oligos_6nt_mkv4_m29 versus MA1128.1_rc (FOSL1::JUN_rc); m=15/34; ncol2=13; w=11; offset=-1; strand=R; shift=4; score=0.802861; ----kkaTGAGTCAymm-- ; cor=; Ncor= a 0 0 0 0 196.0 223.0 579.0 4.0 4.0 826.0 97.0 3.0 38.0 996.0 26.0 289.0 293.0 0 0 c 0 0 0 0 237.0 173.0 119.0 9.0 2.0 140.0 51.0 2.0 957.0 1.0 283.0 380.0 253.0 0 0 g 0 0 0 0 289.0 308.0 245.0 4.0 835.0 2.0 826.0 2.0 2.0 2.0 89.0 159.0 246.0 0 0 t 0 0 0 0 277.0 296.0 57.0 984.0 159.0 33.0 26.0 994.0 3.0 1.0 602.0 172.0 208.0 0 0
MA0477.2_rc_shift4 (FOSL1_rc)				; oligos_6nt_mkv4_m29 versus MA0477.2_rc (FOSL1_rc); m=16/34; ncol2=13; w=11; offset=-1; strand=R; shift=4; score=0.799519; ----rdaTGAGTCAtyh-- ; cor=; Ncor= a 0 0 0 0 15023.0 15056.0 38033.0 363.0 559.0 55860.0 2591.0 302.0 2246.0 56778.0 2795.0 13887.0 15363.0 0 0 c 0 0 0 0 11065.0 12314.0 6533.0 566.0 278.0 598.0 8615.0 286.0 54619.0 183.0 13127.0 16855.0 14848.0 0 0 g 0 0 0 0 17637.0 15640.0 10399.0 344.0 53711.0 163.0 43918.0 287.0 301.0 460.0 6703.0 11018.0 12491.0 0 0 t 0 0 0 0 13956.0 14671.0 2716.0 56408.0 3133.0 1060.0 2557.0 56806.0 515.0 260.0 35056.0 15921.0 14979.0 0 0
MA0478.1_rc_shift6 (FOSL2_rc)				; oligos_6nt_mkv4_m29 versus MA0478.1_rc (FOSL2_rc); m=17/34; ncol2=11; w=10; offset=1; strand=R; shift=6; score=0.788987; ------vTGAsTCAyym-- ; cor=; Ncor= a 0 0 0 0 0 0 1986.0 0.0 0.0 5318.0 194.0 0.0 0.0 5318.0 74.0 494.0 1405.0 0 0 c 0 0 0 0 0 0 1933.0 0.0 0.0 0.0 1838.0 192.0 5318.0 0.0 2328.0 2707.0 2086.0 0 0 g 0 0 0 0 0 0 1399.0 0.0 5113.0 0.0 3286.0 51.0 0.0 0.0 55.0 592.0 994.0 0 0 t 0 0 0 0 0 0 0.0 5318.0 205.0 0.0 0.0 5075.0 0.0 0.0 2861.0 1525.0 833.0 0 0
MA1137.1_rc_shift4 (FOSL1::JUNB_rc)				; oligos_6nt_mkv4_m29 versus MA1137.1_rc (FOSL1::JUNB_rc); m=18/34; ncol2=13; w=11; offset=-1; strand=R; shift=4; score=0.788181; ----gkaTKAgTCAymr-- ; cor=; Ncor= a 0 0 0 0 230.0 198.0 552.0 37.0 37.0 803.0 113.0 42.0 63.0 945.0 47.0 263.0 300.0 0 0 c 0 0 0 0 223.0 204.0 170.0 38.0 9.0 115.0 198.0 21.0 880.0 16.0 287.0 376.0 195.0 0 0 g 0 0 0 0 300.0 298.0 225.0 21.0 683.0 23.0 626.0 20.0 21.0 16.0 100.0 146.0 269.0 0 0 t 0 0 0 0 247.0 300.0 53.0 904.0 271.0 59.0 63.0 917.0 36.0 23.0 566.0 216.0 237.0 0 0
MA0490.2_rc_shift4 (JUNB_rc)				; oligos_6nt_mkv4_m29 versus MA0490.2_rc (JUNB_rc); m=19/34; ncol2=13; w=11; offset=-1; strand=R; shift=4; score=0.777663; ----dwATGAGTCAThw-- ; cor=; Ncor= a 0 0 0 0 22998.0 22591.0 59750.0 693.0 797.0 76655.0 4798.0 682.0 3779.0 78342.0 3866.0 20085.0 22351.0 0 0 c 0 0 0 0 15068.0 16491.0 7508.0 900.0 617.0 913.0 10519.0 550.0 74757.0 322.0 11566.0 20403.0 18150.0 0 0 g 0 0 0 0 20653.0 19230.0 8876.0 588.0 73199.0 289.0 59784.0 523.0 550.0 654.0 7817.0 15807.0 16583.0 0 0 t 0 0 0 0 21137.0 21544.0 3722.0 77675.0 5243.0 1999.0 4755.0 78101.0 770.0 538.0 56607.0 23561.0 22772.0 0 0
MA0491.2_rc_shift4 (JUND_rc)				; oligos_6nt_mkv4_m29 versus MA0491.2_rc (JUND_rc); m=20/34; ncol2=13; w=11; offset=-1; strand=R; shift=4; score=0.77744; ----ddATGAGTCAtyw-- ; cor=; Ncor= a 0 0 0 0 28704.0 27477.0 83216.0 809.0 1449.0 102249.0 4650.0 925.0 3920.0 104101.0 5020.0 25652.0 30507.0 0 0 c 0 0 0 0 19236.0 22249.0 7908.0 965.0 953.0 1147.0 20633.0 573.0 99787.0 443.0 20586.0 31347.0 25006.0 0 0 g 0 0 0 0 29793.0 28250.0 12025.0 751.0 98628.0 496.0 76028.0 650.0 873.0 757.0 10173.0 19712.0 21965.0 0 0 t 0 0 0 0 28212.0 27969.0 2796.0 103420.0 4915.0 2053.0 4634.0 103797.0 1365.0 644.0 70166.0 29234.0 28467.0 0 0
MA1633.1_rc_shift3 (BACH1_rc)				; oligos_6nt_mkv4_m29 versus MA1633.1_rc (BACH1_rc); m=21/34; ncol2=13; w=11; offset=-2; strand=R; shift=3; score=0.777371; ---wtGCTGAGTCAts--- ; cor=; Ncor= a 0 0 0 3938.0 2620.0 548.0 1545.0 275.0 240.0 14421.0 434.0 114.0 480.0 15036.0 947.0 3519.0 0 0 0 c 0 0 0 3553.0 1971.0 858.0 13050.0 310.0 178.0 266.0 2083.0 167.0 14831.0 149.0 3848.0 4835.0 0 0 0 g 0 0 0 3574.0 2167.0 13382.0 623.0 194.0 14563.0 220.0 12597.0 230.0 149.0 267.0 3833.0 3946.0 0 0 0 t 0 0 0 4492.0 8799.0 769.0 339.0 14778.0 576.0 650.0 443.0 15046.0 97.0 105.0 6929.0 3257.0 0 0 0
MA1622.1_rc_shift4 (Smad2::Smad3_rc)				; oligos_6nt_mkv4_m29 versus MA1622.1_rc (Smad2::Smad3_rc); m=22/34; ncol2=14; w=11; offset=-1; strand=R; shift=4; score=0.761106; ----kwaTGAGTCAymay- ; cor=; Ncor= a 0 0 0 0 2480.0 2764.0 5636.0 125.0 101.0 9977.0 696.0 102.0 405.0 10151.0 794.0 2725.0 2998.0 2481.0 0 c 0 0 0 0 2524.0 2154.0 1979.0 79.0 90.0 68.0 1542.0 58.0 9768.0 56.0 2888.0 3479.0 2324.0 2615.0 0 g 0 0 0 0 2595.0 2479.0 2047.0 85.0 9443.0 53.0 7480.0 44.0 82.0 59.0 2212.0 1642.0 2515.0 2254.0 0 t 0 0 0 0 2746.0 2948.0 683.0 10056.0 711.0 247.0 627.0 10141.0 90.0 79.0 4451.0 2499.0 2508.0 2995.0 0
MA0655.1_rc_shift6 (JDP2_rc)				; oligos_6nt_mkv4_m29 versus MA0655.1_rc (JDP2_rc); m=23/34; ncol2=9; w=9; offset=1; strand=R; shift=6; score=0.725901; ------ATGASTCAT---- ; cor=; Ncor= a 0 0 0 0 0 0 1634.0 7.0 9.0 1634.0 13.0 25.0 22.0 1634.0 8.0 0 0 0 0 c 0 0 0 0 0 0 5.0 0.0 3.0 6.0 434.0 2.0 1634.0 1.0 140.0 0 0 0 0 g 0 0 0 0 0 0 404.0 0.0 1634.0 0.0 1200.0 1.0 3.0 6.0 19.0 0 0 0 0 t 0 0 0 0 0 0 22.0 1634.0 22.0 6.0 14.0 1634.0 0.0 5.0 1634.0 0 0 0 0
MA0496.3_rc_shift2 (MAFK_rc)				; oligos_6nt_mkv4_m29 versus MA0496.3_rc (MAFK_rc); m=24/34; ncol2=15; w=11; offset=-3; strand=R; shift=2; score=0.663189; --wwkGCTGAGTCAkca-- ; cor=; Ncor= a 0 0 18619.0 14552.0 8204.0 2285.0 4361.0 1910.0 1087.0 46798.0 2544.0 1274.0 2565.0 47492.0 3939.0 9573.0 19030.0 0 0 c 0 0 8541.0 10512.0 4590.0 3327.0 44013.0 1267.0 957.0 1081.0 7573.0 1306.0 46695.0 1058.0 6706.0 21904.0 9969.0 0 0 g 0 0 9756.0 10737.0 14138.0 43458.0 1921.0 882.0 47872.0 1133.0 39125.0 1670.0 1366.0 1568.0 27000.0 10655.0 10789.0 0 0 t 0 0 14818.0 15933.0 24802.0 2664.0 1439.0 47675.0 1818.0 2722.0 2492.0 47484.0 1108.0 1616.0 14089.0 9602.0 11946.0 0 0
MA0591.1_rc_shift3 (Bach1::Mafk_rc)				; oligos_6nt_mkv4_m29 versus MA0591.1_rc (Bach1::Mafk_rc); m=25/34; ncol2=15; w=11; offset=-2; strand=R; shift=3; score=0.639588; ---sTGCTGAGTCAyssy- ; cor=; Ncor= a 0 0 0 22.0 6.0 0.0 0.0 2.0 0.0 109.0 0.0 1.0 7.0 111.0 0.0 4.0 18.0 14.0 0 c 0 0 0 38.0 6.0 0.0 113.0 3.0 2.0 4.0 20.0 0.0 107.0 0.0 32.0 54.0 46.0 41.0 0 g 0 0 0 42.0 4.0 114.0 1.0 1.0 107.0 0.0 94.0 0.0 0.0 1.0 16.0 41.0 36.0 14.0 0 t 0 0 0 12.0 98.0 0.0 0.0 108.0 5.0 1.0 0.0 113.0 0.0 2.0 66.0 15.0 14.0 45.0 0
MA0489.1_rc_shift6 (JUN(var.2)_rc)				; oligos_6nt_mkv4_m29 versus MA0489.1_rc (JUN(var.2)_rc); m=26/34; ncol2=14; w=10; offset=1; strand=R; shift=6; score=0.622537; ------aTGAsTCAyyyyy ; cor=; Ncor= a 0 0 0 0 0 0 5426.0 0.0 0.0 10757.0 780.0 3.0 0.0 10956.0 0.0 2004.0 1977.0 1773.0 1595.0 c 0 0 0 0 0 0 2645.0 0.0 0.0 0.0 4090.0 0.0 10956.0 0.0 4033.0 4213.0 3461.0 4330.0 4110.0 g 0 0 0 0 0 0 2509.0 0.0 10000.0 0.0 5704.0 0.0 0.0 0.0 993.0 593.0 1122.0 1127.0 1324.0 t 0 0 0 0 0 0 376.0 10956.0 956.0 199.0 382.0 10953.0 0.0 0.0 5930.0 4146.0 4396.0 3726.0 3927.0
MA0150.2_rc_shift4 (Nfe2l2_rc)				; oligos_6nt_mkv4_m29 versus MA0150.2_rc (Nfe2l2_rc); m=27/34; ncol2=15; w=11; offset=-1; strand=R; shift=4; score=0.620057; ----TGCTGAGTCAykstg ; cor=; Ncor= a 0 0 0 0 46.0 4.0 7.0 56.0 66.0 606.0 55.0 0.0 15.0 726.0 5.0 124.0 94.0 88.0 113.0 c 0 0 0 0 31.0 19.0 698.0 90.0 46.0 16.0 118.0 0.0 711.0 0.0 205.0 152.0 275.0 159.0 109.0 g 0 0 0 0 26.0 699.0 11.0 3.0 549.0 20.0 533.0 0.0 0.0 0.0 28.0 247.0 239.0 78.0 338.0 t 0 0 0 0 623.0 4.0 10.0 577.0 65.0 84.0 20.0 726.0 0.0 0.0 488.0 203.0 118.0 401.0 166.0
MA0089.2_rc_shift2 (NFE2L1_rc)				; oligos_6nt_mkv4_m29 versus MA0089.2_rc (NFE2L1_rc); m=28/34; ncol2=16; w=11; offset=-3; strand=R; shift=2; score=0.600607; --wtTGCTGAGTCATkbt- ; cor=; Ncor= a 0 0 1682.0 783.0 293.0 26.0 263.0 98.0 97.0 3091.0 83.0 6.0 24.0 3337.0 11.0 769.0 482.0 738.0 0 c 0 0 305.0 694.0 142.0 33.0 3018.0 78.0 25.0 35.0 358.0 10.0 3308.0 2.0 706.0 742.0 1050.0 671.0 0 g 0 0 224.0 517.0 64.0 3281.0 18.0 9.0 3049.0 12.0 2864.0 4.0 7.0 5.0 57.0 853.0 946.0 703.0 0 t 0 0 1145.0 1362.0 2857.0 16.0 57.0 3171.0 185.0 218.0 51.0 3336.0 17.0 12.0 2582.0 992.0 878.0 1244.0 0
MA0501.1_rc_shift0 (MAF::NFE2_rc)				; oligos_6nt_mkv4_m29 versus MA0501.1_rc (MAF::NFE2_rc); m=29/34; ncol2=15; w=10; offset=-5; strand=R; shift=0; score=0.543665; rwwyTGCTGAGTCAy---- ; cor=; Ncor= a 490.0 605.0 499.0 221.0 69.0 5.0 37.0 61.0 51.0 967.0 37.0 0.0 8.0 1090.0 4.0 0 0 0 0 c 106.0 91.0 130.0 283.0 73.0 22.0 1041.0 51.0 22.0 12.0 166.0 0.0 1082.0 0.0 334.0 0 0 0 0 g 283.0 102.0 100.0 203.0 17.0 1063.0 4.0 0.0 937.0 1.0 871.0 0.0 0.0 0.0 26.0 0 0 0 0 t 211.0 292.0 361.0 383.0 931.0 0.0 8.0 978.0 80.0 110.0 16.0 1090.0 0.0 0.0 726.0 0 0 0 0
MA1521.1_shift3 (MAFA)				; oligos_6nt_mkv4_m29 versus MA1521.1 (MAFA); m=30/34; ncol2=15; w=11; offset=-2; strand=D; shift=3; score=0.519033; ---dTGCTGAsTCAGCah- ; cor=; Ncor= a 0 0 0 2273.0 673.0 304.0 970.0 973.0 668.0 7498.0 602.0 1281.0 1204.0 8128.0 473.0 26.0 6132.0 2465.0 0 c 0 0 0 1563.0 1857.0 206.0 7939.0 986.0 475.0 1615.0 3985.0 240.0 7985.0 453.0 104.0 8371.0 223.0 2126.0 0 g 0 0 0 2152.0 316.0 8343.0 185.0 451.0 8028.0 317.0 4024.0 1781.0 422.0 889.0 7957.0 221.0 1956.0 1532.0 0 t 0 0 0 2475.0 6277.0 119.0 540.0 8138.0 1291.0 1231.0 657.0 7524.0 715.0 1123.0 973.0 258.0 802.0 2340.0 0
MA1520.1_shift3 (MAF)				; oligos_6nt_mkv4_m29 versus MA1520.1 (MAF); m=31/34; ncol2=15; w=11; offset=-2; strand=D; shift=3; score=0.517016; ---wTGCTGAsTCAGCAw- ; cor=; Ncor= a 0 0 0 968.0 213.0 80.0 364.0 439.0 316.0 2712.0 387.0 529.0 609.0 2904.0 216.0 48.0 2353.0 977.0 0 c 0 0 0 516.0 516.0 45.0 2837.0 243.0 185.0 343.0 1277.0 89.0 2776.0 103.0 51.0 2964.0 72.0 575.0 0 g 0 0 0 587.0 51.0 2938.0 53.0 116.0 2739.0 116.0 1431.0 404.0 156.0 314.0 2821.0 56.0 562.0 486.0 0 t 0 0 0 922.0 2397.0 8.0 219.0 2859.0 682.0 432.0 344.0 2715.0 301.0 359.0 329.0 66.0 210.0 955.0 0
MA1101.2_rc_shift1 (BACH2_rc)				; oligos_6nt_mkv4_m29 versus MA1101.2_rc (BACH2_rc); m=32/34; ncol2=19; w=11; offset=-4; strand=R; shift=1; score=0.486952; -awabsATGAsTCATGstw ; cor=; Ncor= a 0 26118.0 39012.0 54749.0 11783.0 5274.0 63746.0 0.0 3.0 67975.0 18.0 6.0 54.0 68266.0 0.0 8116.0 13391.0 15405.0 24469.0 c 0 11268.0 8221.0 7650.0 19155.0 30498.0 2028.0 11.0 0.0 856.0 30785.0 13.0 68240.0 1.0 15304.0 6727.0 21257.0 8490.0 9605.0 g 0 15623.0 10703.0 13438.0 17682.0 35220.0 11634.0 2.0 68215.0 20.0 37438.0 1088.0 0.0 7.0 260.0 61580.0 21218.0 5534.0 8823.0 t 0 15261.0 23586.0 18457.0 19650.0 4522.0 47.0 68264.0 115.0 3.0 50.0 67846.0 6.0 1.0 62993.0 9369.0 12404.0 59307.0 38327.0
MA0067.1_shift9 (Pax2)				; oligos_6nt_mkv4_m29 versus MA0067.1 (Pax2); m=33/34; ncol2=8; w=7; offset=4; strand=D; shift=9; score=0.475094; ---------wgTCAykb-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 10.0 7.0 3.0 0.0 26.0 2.0 2.0 1.0 0 0 c 0 0 0 0 0 0 0 0 0 7.0 1.0 2.0 28.0 1.0 17.0 0.0 11.0 0 0 g 0 0 0 0 0 0 0 0 0 5.0 21.0 0.0 1.0 3.0 1.0 19.0 11.0 0 0 t 0 0 0 0 0 0 0 0 0 9.0 2.0 26.0 2.0 1.0 11.0 10.0 8.0 0 0
MA1114.1_shift4 (PBX3)				; oligos_6nt_mkv4_m29 versus MA1114.1 (PBX3); m=34/34; ncol2=17; w=11; offset=-1; strand=D; shift=4; score=0.455989; ----gkbTGAGTGACAGgc ; cor=; Ncor= a 0 0 0 0 1595.0 1510.0 1320.0 596.0 228.0 6426.0 335.0 247.0 146.0 6164.0 150.0 6091.0 369.0 884.0 1251.0 c 0 0 0 0 1711.0 1724.0 1849.0 225.0 227.0 125.0 788.0 199.0 242.0 108.0 6524.0 129.0 412.0 1377.0 2654.0 g 0 0 0 0 2192.0 1934.0 1928.0 503.0 6406.0 214.0 4929.0 285.0 6550.0 604.0 209.0 425.0 5691.0 4077.0 1591.0 t 0 0 0 0 1523.0 1853.0 1924.0 5697.0 160.0 256.0 969.0 6290.0 83.0 145.0 138.0 376.0 549.0 683.0 1525.0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m1_shift0 ; 35 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m1_shift0 (oligos_6nt_mkv4_m1oligos_6nt_mkv4_m1)				; oligos_6nt_mkv4_m1 (oligos_6nt_mkv4_m1oligos_6nt_mkv4_m1); m=0 (reference); ncol1=14; shift=0; ncol=14; rsaACAGCTGTtsy ; Alignment reference a 2756 2348 5712 8088 14 10764 65 36 28 20 588 823 2512 1997 c 2413 2946 2157 741 10777 12 140 10582 18 11 1408 2130 3020 3660 g 3656 3019 2130 1405 11 18 10581 139 12 10777 741 2153 2945 2409 t 1997 2509 823 588 20 28 36 65 10764 14 8085 5716 2345 2756
MA0832.1_rc_shift0 (Tcf21_rc)				; oligos_6nt_mkv4_m1 versus MA0832.1_rc (Tcf21_rc); m=1/34; ncol2=14; w=14; offset=0; strand=R; shift=0; score=0.960681; ryAACAGCTGTTry ; cor=; Ncor= a 60.0 19.0 171.0 171.0 0.0 171.0 1.0 2.0 0.0 0.0 0.0 3.0 46.0 17.0 c 32.0 80.0 0.0 20.0 171.0 0.0 1.0 171.0 0.0 0.0 0.0 23.0 22.0 70.0 g 49.0 23.0 23.0 4.0 0.0 0.0 171.0 0.0 1.0 171.0 10.0 1.0 76.0 29.0 t 30.0 50.0 5.0 0.0 0.0 0.0 0.0 0.0 171.0 0.0 171.0 171.0 28.0 55.0
MA1641.1_shift1 (MYF5)				; oligos_6nt_mkv4_m1 versus MA1641.1 (MYF5); m=2/34; ncol2=12; w=12; offset=1; strand=D; shift=1; score=0.845776; -gvaCAGCTGtbc- ; cor=; Ncor= a 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 0 c 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 0 g 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 0 t 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0 0
MA1485.1_shift0 (FERD3L)				; oligos_6nt_mkv4_m1 versus MA1485.1 (FERD3L); m=3/34; ncol2=14; w=14; offset=0; strand=D; shift=0; score=0.844885; GyrmCAGCTGTyAC ; cor=; Ncor= a 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 c 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 g 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 t 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0
MA1619.1_shift1 (Ptf1a(var.2))				; oligos_6nt_mkv4_m1 versus MA1619.1 (Ptf1a(var.2)); m=4/34; ncol2=12; w=12; offset=1; strand=D; shift=1; score=0.836959; -rmaCAGCTGtky- ; cor=; Ncor= a 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 c 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 g 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 t 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0
MA1621.1_shift0 (Rbpjl)				; oligos_6nt_mkv4_m1 versus MA1621.1 (Rbpjl); m=5/34; ncol2=14; w=14; offset=0; strand=D; shift=0; score=0.811429; svmaCACCTGtsyc ; cor=; Ncor= a 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 c 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 g 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 t 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0
MA0500.2_shift1 (MYOG)				; oligos_6nt_mkv4_m1 versus MA0500.2 (MYOG); m=6/34; ncol2=12; w=12; offset=1; strand=D; shift=1; score=0.797296; -sarCAGCTGyts- ; cor=; Ncor= a 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 c 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 g 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 t 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0
MA1618.1_shift1 (Ptf1a)				; oligos_6nt_mkv4_m1 versus MA1618.1 (Ptf1a); m=7/34; ncol2=13; w=13; offset=1; strand=D; shift=1; score=0.774889; -dmaCAGATGttkh ; cor=; Ncor= a 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 3754.0 c 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 3689.0 g 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 3376.0 t 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0 3622.0
MA0499.2_rc_shift0 (MYOD1_rc)				; oligos_6nt_mkv4_m1 versus MA0499.2_rc (MYOD1_rc); m=8/34; ncol2=13; w=13; offset=0; strand=R; shift=0; score=0.732498; rkrACAGGTGcwg- ; cor=; Ncor= a 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 0 c 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 0 g 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 0 t 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0 0
MA0521.1_shift2 (Tcf12)				; oligos_6nt_mkv4_m1 versus MA0521.1 (Tcf12); m=9/34; ncol2=11; w=11; offset=2; strand=D; shift=2; score=0.724737; --rRCAGCTGswg- ; cor=; Ncor= a 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0
MA1620.1_shift1 (Ptf1a(var.3))				; oligos_6nt_mkv4_m1 versus MA1620.1 (Ptf1a(var.3)); m=10/34; ncol2=12; w=12; offset=1; strand=D; shift=1; score=0.711939; -rmaCACCTGtky- ; cor=; Ncor= a 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 c 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 g 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 t 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0
MA0665.1_shift2 (MSC)				; oligos_6nt_mkv4_m1 versus MA0665.1 (MSC); m=11/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.695722; --AACAGCTGTT-- ; cor=; Ncor= a 0 0 69.0 69.0 0.0 69.0 0.0 0.0 0.0 0.0 3.0 0.0 0 0 c 0 0 0.0 12.0 69.0 0.0 12.0 69.0 0.0 0.0 10.0 9.0 0 0 g 0 0 18.0 3.0 3.0 0.0 69.0 3.0 0.0 69.0 4.0 4.0 0 0 t 0 0 7.0 0.0 1.0 0.0 0.0 0.0 69.0 4.0 69.0 69.0 0 0
MA1467.1_rc_shift2 (ATOH1(var.2)_rc)				; oligos_6nt_mkv4_m1 versus MA1467.1_rc (ATOH1(var.2)_rc); m=12/34; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.68334; --RACAGCTGTT-- ; cor=; Ncor= a 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 c 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 g 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 t 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0
MA0091.1_shift0 (TAL1::TCF3)				; oligos_6nt_mkv4_m1 versus MA0091.1 (TAL1::TCF3); m=13/34; ncol2=12; w=12; offset=0; strand=D; shift=0; score=0.681538; mgAmCAKMTGkT-- ; cor=; Ncor= a 13.0 9.0 39.0 20.0 0.0 44.0 0.0 12.0 0.0 0.0 0.0 4.0 0 0 c 14.0 10.0 0.0 24.0 43.0 0.0 1.0 32.0 0.0 0.0 3.0 4.0 0 0 g 8.0 20.0 3.0 0.0 1.0 0.0 11.0 0.0 0.0 43.0 20.0 2.0 0 0 t 9.0 5.0 2.0 0.0 0.0 0.0 32.0 0.0 44.0 1.0 21.0 34.0 0 0
MA1472.1_rc_shift2 (BHLHA15(var.2)_rc)				; oligos_6nt_mkv4_m1 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=14/34; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.680194; --rrCAGCTGbt-- ; cor=; Ncor= a 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 c 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 g 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 t 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0
MA0691.1_shift2 (TFAP4)				; oligos_6nt_mkv4_m1 versus MA0691.1 (TFAP4); m=15/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.677507; --AwCAGCTGwT-- ; cor=; Ncor= a 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0
MA0745.2_shift1 (SNAI2)				; oligos_6nt_mkv4_m1 versus MA0745.2 (SNAI2); m=16/34; ncol2=13; w=13; offset=1; strand=D; shift=1; score=0.672479; -aygCACCTGTmry ; cor=; Ncor= a 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 c 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 g 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 t 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0
MA0667.1_rc_shift2 (MYF6_rc)				; oligos_6nt_mkv4_m1 versus MA0667.1_rc (MYF6_rc); m=17/34; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.670361; --RACAGyTGTT-- ; cor=; Ncor= a 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 0 c 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 0 g 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 0 t 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0 0
MA1123.2_rc_shift1 (TWIST1_rc)				; oligos_6nt_mkv4_m1 versus MA1123.2_rc (TWIST1_rc); m=18/34; ncol2=13; w=13; offset=1; strand=R; shift=1; score=0.669281; -avaCATCTGGwwt ; cor=; Ncor= a 0 7736.0 8588.0 18544.0 582.0 26232.0 214.0 1407.0 274.0 174.0 852.0 9428.0 8259.0 6758.0 c 0 6213.0 7273.0 4069.0 25975.0 288.0 908.0 24166.0 210.0 117.0 2336.0 5772.0 5722.0 6485.0 g 0 6561.0 7402.0 2919.0 396.0 456.0 1687.0 1320.0 136.0 26665.0 20412.0 4597.0 5530.0 5761.0 t 0 6823.0 4070.0 1801.0 380.0 357.0 24524.0 440.0 26713.0 377.0 3733.0 7536.0 7822.0 8329.0
MA0698.1_rc_shift1 (ZBTB18_rc)				; oligos_6nt_mkv4_m1 versus MA0698.1_rc (ZBTB18_rc); m=19/34; ncol2=13; w=13; offset=1; strand=R; shift=1; score=0.658348; -vmACATCTGGatd ; cor=; Ncor= a 0 4027.0 8140.0 13670.0 1.0 13670.0 297.0 6.0 206.0 8.0 60.0 13670.0 3319.0 3423.0 c 0 3876.0 5530.0 36.0 13670.0 94.0 278.0 13670.0 33.0 3.0 1899.0 5212.0 2535.0 2499.0 g 0 4042.0 177.0 314.0 1.0 15.0 1048.0 245.0 5.0 13670.0 13670.0 1937.0 753.0 4188.0 t 0 1725.0 210.0 48.0 3.0 14.0 13670.0 3.0 13670.0 21.0 3618.0 1177.0 7064.0 3561.0
MA0816.1_shift2 (Ascl2)				; oligos_6nt_mkv4_m1 versus MA0816.1 (Ascl2); m=20/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.656182; --arCAGCTGyy-- ; cor=; Ncor= a 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0
MA1642.1_rc_shift1 (NEUROG2(var.2)_rc)				; oligos_6nt_mkv4_m1 versus MA1642.1_rc (NEUROG2(var.2)_rc); m=21/34; ncol2=13; w=13; offset=1; strand=R; shift=1; score=0.654764; -brCCATCTGtyyy ; cor=; Ncor= a 0 7184.0 9704.0 4904.0 484.0 32515.0 275.0 2806.0 159.0 237.0 1750.0 4721.0 8378.0 7535.0 c 0 8709.0 7581.0 24998.0 33422.0 323.0 418.0 30392.0 301.0 317.0 8039.0 11114.0 10123.0 10813.0 g 0 9034.0 10441.0 2966.0 205.0 904.0 952.0 793.0 211.0 33559.0 8154.0 6467.0 6843.0 7353.0 t 0 9464.0 6665.0 1523.0 280.0 649.0 32746.0 400.0 33720.0 278.0 16448.0 12089.0 9047.0 8690.0
MA1109.1_rc_shift0 (NEUROD1_rc)				; oligos_6nt_mkv4_m1 versus MA1109.1_rc (NEUROD1_rc); m=22/34; ncol2=13; w=13; offset=0; strand=R; shift=0; score=0.65008; syrCCATCTGtyc- ; cor=; Ncor= a 525.0 451.0 580.0 168.0 31.0 2157.0 21.0 90.0 18.0 12.0 47.0 298.0 566.0 0 c 628.0 599.0 418.0 1962.0 2231.0 19.0 77.0 2152.0 16.0 13.0 494.0 906.0 726.0 0 g 591.0 540.0 911.0 93.0 7.0 51.0 150.0 24.0 7.0 2240.0 452.0 323.0 429.0 0 t 538.0 692.0 373.0 59.0 13.0 55.0 2034.0 16.0 2241.0 17.0 1289.0 755.0 561.0 0
MA1635.1_shift2 (BHLHE22(var.2))				; oligos_6nt_mkv4_m1 versus MA1635.1 (BHLHE22(var.2)); m=23/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.641633; --csCAGCTGsg-- ; cor=; Ncor= a 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 c 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 g 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 t 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0
MA0796.1_rc_shift1 (TGIF1_rc)				; oligos_6nt_mkv4_m1 versus MA0796.1_rc (TGIF1_rc); m=24/34; ncol2=12; w=12; offset=1; strand=R; shift=1; score=0.64136; -TGACAGCTGTCA- ; cor=; Ncor= a 0 33.0 17.0 12656.0 9.0 12775.0 12.0 963.0 4.0 7.0 0.0 4.0 13221.0 0 c 0 32.0 13.0 3.0 13261.0 8.0 2520.0 12673.0 22.0 5.0 20.0 13499.0 1.0 0 g 0 17.0 13485.0 24.0 13.0 62.0 10562.0 20.0 5.0 13304.0 3.0 8.0 19.0 0 t 0 9034.0 36.0 45.0 11.0 1.0 452.0 14.0 8861.0 1.0 8828.0 9.0 39.0 0
MA1571.1_shift1 (TGIF2LX)				; oligos_6nt_mkv4_m1 versus MA1571.1 (TGIF2LX); m=25/34; ncol2=12; w=12; offset=1; strand=D; shift=1; score=0.631437; -TGACAgcTGTCA- ; cor=; Ncor= a 0 237.0 52.0 2539.0 32.0 2539.0 37.0 380.0 37.0 64.0 428.0 45.0 2539.0 0 c 0 355.0 187.0 64.0 2539.0 18.0 575.0 1568.0 318.0 23.0 127.0 2539.0 132.0 0 g 0 145.0 2539.0 132.0 29.0 316.0 1566.0 554.0 23.0 2539.0 72.0 172.0 361.0 0 t 0 2539.0 47.0 428.0 59.0 40.0 362.0 38.0 2539.0 22.0 2539.0 66.0 232.0 0
MA0797.1_rc_shift1 (TGIF2_rc)				; oligos_6nt_mkv4_m1 versus MA0797.1_rc (TGIF2_rc); m=26/34; ncol2=12; w=12; offset=1; strand=R; shift=1; score=0.618481; -TGACAsCTGTCA- ; cor=; Ncor= a 0 420.0 113.0 11801.0 83.0 11801.0 91.0 2690.0 41.0 156.0 155.0 52.0 11801.0 0 c 0 395.0 136.0 123.0 11801.0 57.0 4341.0 11801.0 270.0 51.0 396.0 11801.0 153.0 0 g 0 172.0 11801.0 621.0 77.0 410.0 7459.0 262.0 25.0 11801.0 34.0 48.0 421.0 0 t 0 11801.0 70.0 601.0 150.0 71.0 1501.0 324.0 11801.0 127.0 11801.0 97.0 477.0 0
MA1100.2_rc_shift2 (ASCL1_rc)				; oligos_6nt_mkv4_m1 versus MA1100.2_rc (ASCL1_rc); m=27/34; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.615655; --rgCAGCTGyy-- ; cor=; Ncor= a 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 c 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 g 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 t 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0
MA1572.1_shift1 (TGIF2LY)				; oligos_6nt_mkv4_m1 versus MA1572.1 (TGIF2LY); m=28/34; ncol2=12; w=12; offset=1; strand=D; shift=1; score=0.612566; -TGACAgcTGTCA- ; cor=; Ncor= a 0 736.0 162.0 5209.0 123.0 5209.0 130.0 1033.0 140.0 175.0 1084.0 135.0 5209.0 0 c 0 836.0 270.0 163.0 5209.0 37.0 1267.0 2850.0 848.0 61.0 371.0 5209.0 362.0 0 g 0 415.0 5209.0 349.0 66.0 833.0 2794.0 1188.0 73.0 5209.0 145.0 259.0 807.0 0 t 0 5209.0 104.0 1197.0 144.0 110.0 1018.0 138.0 5209.0 121.0 5209.0 172.0 679.0 0
MA0820.1_shift2 (FIGLA)				; oligos_6nt_mkv4_m1 versus MA0820.1 (FIGLA); m=29/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.591962; --wmCACCTGkw-- ; cor=; Ncor= a 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 c 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 g 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 t 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0
MA0048.2_shift2 (NHLH1)				; oligos_6nt_mkv4_m1 versus MA0048.2 (NHLH1); m=30/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.578139; --cGCAGCTGCk-- ; cor=; Ncor= a 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 c 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 g 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 t 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0
MA1570.1_shift2 (TFAP4(var.2))				; oligos_6nt_mkv4_m1 versus MA1570.1 (TFAP4(var.2)); m=31/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.528445; --ahCAyrTGkt-- ; cor=; Ncor= a 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 0 c 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 0 g 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 0 t 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0 0
MA1638.1_rc_shift2 (HAND2_rc)				; oligos_6nt_mkv4_m1 versus MA1638.1_rc (HAND2_rc); m=32/34; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.512417; --rvCATCTGkt-- ; cor=; Ncor= a 0 0 7783.0 8498.0 49.0 27962.0 23.0 85.0 4.0 70.0 3155.0 7120.0 0 0 c 0 0 6108.0 8878.0 29851.0 31.0 38.0 30144.0 647.0 132.0 6994.0 7463.0 0 0 g 0 0 10227.0 7690.0 149.0 2276.0 30.0 42.0 410.0 30062.0 11298.0 5564.0 0 0 t 0 0 6165.0 5217.0 234.0 14.0 30192.0 12.0 29222.0 19.0 8836.0 10136.0 0 0
MA1559.1_rc_shift2 (SNAI3_rc)				; oligos_6nt_mkv4_m1 versus MA1559.1_rc (SNAI3_rc); m=33/34; ncol2=10; w=10; offset=2; strand=R; shift=2; score=0.510277; --trCACCTGyt-- ; cor=; Ncor= a 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 c 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 g 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 t 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0
MA0100.3_shift2 (MYB)				; oligos_6nt_mkv4_m1 versus MA0100.3 (MYB); m=34/34; ncol2=10; w=10; offset=2; strand=D; shift=2; score=0.50254; --mbCAACTGhm-- ; cor=; Ncor= a 0 0 425.0 292.0 0.0 1478.0 1519.0 0.0 1.0 8.0 401.0 422.0 0 0 c 0 0 422.0 428.0 1513.0 3.0 2.0 1527.0 60.0 3.0 482.0 528.0 0 0 g 0 0 300.0 397.0 5.0 39.0 0.0 0.0 68.0 1516.0 147.0 225.0 0 0 t 0 0 380.0 410.0 9.0 7.0 6.0 0.0 1398.0 0.0 497.0 352.0 0 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m11_shift4 ; 5 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m11_shift4 (oligos_7nt_mkv5_m11oligos_7nt_mkv5_m11)				; oligos_7nt_mkv5_m11 (oligos_7nt_mkv5_m11oligos_7nt_mkv5_m11); m=0 (reference); ncol1=11; shift=4; ncol=16; ----gdAACCTGAsm- ; Alignment reference a 0 0 0 0 240 335 1080 1081 5 25 2 41 1079 215 334 0 c 0 0 0 0 192 159 0 0 1063 970 70 5 1 299 351 0 g 0 0 0 0 482 309 0 0 2 83 68 991 0 341 234 0 t 0 0 0 0 169 280 3 2 13 5 943 46 3 228 164 0
MA1118.1_shift4 (SIX1)				; oligos_7nt_mkv5_m11 versus MA1118.1 (SIX1); m=1/4; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.953059; ----GwAACCTGAkm- ; cor=; Ncor= a 0 0 0 0 96.0 400.0 1049.0 1076.0 43.0 112.0 51.0 48.0 1070.0 146.0 546.0 0 c 0 0 0 0 43.0 77.0 18.0 8.0 959.0 871.0 46.0 9.0 7.0 179.0 360.0 0 g 0 0 0 0 859.0 90.0 6.0 10.0 12.0 31.0 30.0 1025.0 11.0 289.0 73.0 0 t 0 0 0 0 110.0 541.0 35.0 14.0 94.0 94.0 981.0 26.0 20.0 494.0 129.0 0
MA0684.2_shift4 (RUNX3)				; oligos_7nt_mkv5_m11 versus MA0684.2 (RUNX3); m=2/4; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.683783; ----awAACCTCAawh ; cor=; Ncor= a 0 0 0 0 7768.0 9558.0 19136.0 26243.0 427.0 495.0 6357.0 611.0 26121.0 16137.0 8778.0 6879.0 c 0 0 0 0 6083.0 5007.0 2662.0 315.0 26293.0 26208.0 419.0 26015.0 414.0 3077.0 5994.0 6900.0 g 0 0 0 0 6685.0 3547.0 3500.0 431.0 198.0 385.0 1911.0 390.0 338.0 4696.0 5642.0 6372.0 t 0 0 0 0 6841.0 9265.0 2079.0 388.0 459.0 289.0 18690.0 361.0 504.0 3467.0 6963.0 7226.0
MA1105.2_rc_shift4 (GRHL2_rc)				; oligos_7nt_mkv5_m11 versus MA1105.2_rc (GRHL2_rc); m=3/4; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.65905; ----maAACCTGTTyt ; cor=; Ncor= a 0 0 0 0 13946.0 17515.0 36906.0 36921.0 625.0 1247.0 5826.0 320.0 1260.0 1618.0 6264.0 8493.0 c 0 0 0 0 10536.0 7961.0 1220.0 748.0 39624.0 37226.0 485.0 609.0 2841.0 2646.0 10776.0 9161.0 g 0 0 0 0 8528.0 9341.0 2000.0 2331.0 987.0 581.0 1543.0 40446.0 712.0 1147.0 6996.0 9741.0 t 0 0 0 0 8868.0 7061.0 1752.0 1878.0 642.0 2824.0 34024.0 503.0 37065.0 36467.0 17842.0 14483.0
MA1119.1_shift0 (SIX2)				; oligos_7nt_mkv5_m11 versus MA1119.1 (SIX2); m=4/4; ncol2=16; w=11; offset=-4; strand=D; shift=0; score=0.628858; wwcTGaAACCTGAtmy ; cor=; Ncor= a 1673.0 1607.0 963.0 840.0 165.0 3578.0 4885.0 5275.0 190.0 586.0 325.0 321.0 5202.0 553.0 2415.0 858.0 c 1234.0 1242.0 2910.0 215.0 56.0 319.0 264.0 39.0 4367.0 4169.0 295.0 114.0 75.0 615.0 1812.0 2523.0 g 1145.0 1226.0 828.0 561.0 5065.0 273.0 66.0 74.0 170.0 196.0 175.0 4830.0 85.0 1193.0 563.0 511.0 t 1401.0 1378.0 752.0 3837.0 167.0 1283.0 238.0 65.0 726.0 502.0 4658.0 188.0 91.0 3092.0 663.0 1561.0

One-to-n matrix alignment; reference matrix: dyads_m48_shift4 ; 34 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m48_shift4 (dyads_m48dyads_m48)				; dyads_m48 (dyads_m48dyads_m48); m=0 (reference); ncol1=11; shift=4; ncol=19; ----ksTGAsTCAsm---- ; Alignment reference a 0 0 0 0 1671 1859 0 1 8123 630 0 0 8123 637 2091 0 0 0 0 c 0 0 0 0 1722 2867 0 0 0 3432 0 8122 0 2760 2639 0 0 0 0 g 0 0 0 0 2639 2760 0 8121 0 3431 0 0 0 2867 1722 0 0 0 0 t 0 0 0 0 2091 637 8123 1 0 630 8123 1 0 1859 1671 0 0 0 0
MA0476.1_shift4 (FOS)				; dyads_m48 versus MA0476.1 (FOS); m=1/33; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.950369; ----dvTGAsTCATb---- ; cor=; Ncor= a 0 0 0 0 7879.0 7475.0 0.0 0.0 29396.0 998.0 0.0 0.0 29396.0 258.0 4006.0 0 0 0 0 c 0 0 0 0 712.0 10177.0 0.0 0.0 0.0 14079.0 0.0 29396.0 0.0 5823.0 8236.0 0 0 0 0 g 0 0 0 0 9686.0 10841.0 0.0 27108.0 0.0 11206.0 0.0 0.0 0.0 1538.0 7897.0 0 0 0 0 t 0 0 0 0 11119.0 903.0 29396.0 2288.0 0.0 3113.0 29396.0 0.0 0.0 21777.0 9257.0 0 0 0 0
MA1634.1_shift4 (BATF)				; dyads_m48 versus MA1634.1 (BATF); m=2/33; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.936069; ----waTGACTCAth---- ; cor=; Ncor= a 0 0 0 0 13555.0 22575.0 483.0 1139.0 45946.0 2051.0 1130.0 4742.0 45316.0 8146.0 16139.0 0 0 0 0 c 0 0 0 0 5742.0 8931.0 355.0 570.0 250.0 37333.0 306.0 40279.0 431.0 7566.0 12048.0 0 0 0 0 g 0 0 0 0 11492.0 8627.0 283.0 40617.0 341.0 5573.0 836.0 711.0 507.0 9681.0 5919.0 0 0 0 0 t 0 0 0 0 16219.0 6875.0 45887.0 4682.0 471.0 2051.0 44736.0 1276.0 754.0 21615.0 12902.0 0 0 0 0
MA0462.2_shift4 (BATF::JUN)				; dyads_m48 versus MA0462.2 (BATF::JUN); m=3/33; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.932615; ----waTGACTCAth---- ; cor=; Ncor= a 0 0 0 0 10765.0 18789.0 367.0 834.0 37280.0 1399.0 755.0 3955.0 36854.0 6299.0 13407.0 0 0 0 0 c 0 0 0 0 4762.0 7260.0 275.0 400.0 204.0 31168.0 241.0 32770.0 318.0 6105.0 9668.0 0 0 0 0 g 0 0 0 0 9317.0 6729.0 182.0 33135.0 350.0 4188.0 539.0 522.0 424.0 7745.0 4923.0 0 0 0 0 t 0 0 0 0 13310.0 5376.0 37330.0 3785.0 320.0 1399.0 36619.0 907.0 558.0 18005.0 10156.0 0 0 0 0
MA0835.2_shift4 (BATF3)				; dyads_m48 versus MA0835.2 (BATF3); m=4/33; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.913516; ----waTGACTCAtw---- ; cor=; Ncor= a 0 0 0 0 3609.0 6137.0 132.0 245.0 11670.0 408.0 267.0 1248.0 11529.0 2334.0 4521.0 0 0 0 0 c 0 0 0 0 1245.0 2106.0 59.0 62.0 92.0 10589.0 79.0 10347.0 84.0 1664.0 2733.0 0 0 0 0 g 0 0 0 0 2608.0 1831.0 37.0 10420.0 87.0 560.0 117.0 88.0 117.0 2249.0 1255.0 0 0 0 0 t 0 0 0 0 4503.0 1891.0 11737.0 1238.0 116.0 408.0 11502.0 282.0 235.0 5718.0 3456.0 0 0 0 0
MA1134.1_rc_shift3 (FOS::JUNB_rc)				; dyads_m48 versus MA1134.1_rc (FOS::JUNB_rc); m=5/33; ncol2=12; w=11; offset=-1; strand=R; shift=3; score=0.860624; ---bkrTGAsTCAym---- ; cor=; Ncor= a 0 0 0 156.0 184.0 658.0 1.0 1.0 996.0 25.0 4.0 131.0 998.0 36.0 286.0 0 0 0 0 c 0 0 0 256.0 178.0 51.0 1.0 1.0 3.0 618.0 1.0 868.0 1.0 267.0 372.0 0 0 0 0 g 0 0 0 304.0 363.0 284.0 1.0 971.0 1.0 309.0 30.0 1.0 1.0 105.0 168.0 0 0 0 0 t 0 0 0 283.0 275.0 7.0 998.0 27.0 1.0 48.0 965.0 1.0 1.0 593.0 174.0 0 0 0 0
MA0841.1_shift4 (NFE2)				; dyads_m48 versus MA0841.1 (NFE2); m=6/33; ncol2=11; w=11; offset=0; strand=D; shift=4; score=0.85827; ----vATGACTCATs---- ; cor=; Ncor= a 0 0 0 0 5589.0 18831.0 2.0 0.0 18831.0 37.0 0.0 1.0 18831.0 0.0 487.0 0 0 0 0 c 0 0 0 0 7208.0 9.0 8.0 0.0 11.0 14360.0 20.0 18831.0 13.0 2689.0 9860.0 0 0 0 0 g 0 0 0 0 5303.0 1306.0 0.0 18831.0 0.0 4472.0 3.0 0.0 8.0 10.0 5067.0 0 0 0 0 t 0 0 0 0 731.0 5.0 18831.0 2.0 4.0 17.0 18831.0 3.0 5.0 18831.0 3417.0 0 0 0 0
MA1130.1_rc_shift4 (FOSL2::JUN_rc)				; dyads_m48 versus MA1130.1_rc (FOSL2::JUN_rc); m=7/33; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.85676; ----krTGACTCAymm--- ; cor=; Ncor= a 0 0 0 0 209.0 589.0 1.0 1.0 998.0 58.0 29.0 158.0 998.0 55.0 269.0 268.0 0 0 0 c 0 0 0 0 180.0 93.0 1.0 1.0 1.0 698.0 1.0 840.0 1.0 282.0 338.0 295.0 0 0 0 g 0 0 0 0 341.0 299.0 0.0 979.0 1.0 141.0 123.0 1.0 1.0 121.0 179.0 248.0 0 0 0 t 0 0 0 0 269.0 19.0 998.0 20.0 1.0 103.0 847.0 1.0 1.0 542.0 214.0 189.0 0 0 0
MA1135.1_rc_shift5 (FOSB::JUNB_rc)				; dyads_m48 versus MA1135.1_rc (FOSB::JUNB_rc); m=8/33; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.856116; -----rTGAsTCAym---- ; cor=; Ncor= a 0 0 0 0 0 578.0 1.0 1.0 958.0 61.0 1.0 19.0 998.0 20.0 270.0 0 0 0 0 c 0 0 0 0 0 126.0 1.0 1.0 39.0 309.0 1.0 980.0 1.0 321.0 429.0 0 0 0 0 g 0 0 0 0 0 259.0 0.0 808.0 1.0 596.0 1.0 0.0 0.0 61.0 182.0 0 0 0 0 t 0 0 0 0 0 37.0 998.0 191.0 2.0 34.0 997.0 1.0 1.0 598.0 119.0 0 0 0 0
MA1138.1_rc_shift5 (FOSL2::JUNB_rc)				; dyads_m48 versus MA1138.1_rc (FOSL2::JUNB_rc); m=9/33; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.855049; -----rTGAsTCAym---- ; cor=; Ncor= a 0 0 0 0 0 602.0 0.0 0.0 973.0 85.0 0.0 14.0 999.0 13.0 277.0 0 0 0 0 c 0 0 0 0 0 112.0 0.0 0.0 26.0 292.0 0.0 985.0 0.0 314.0 407.0 0 0 0 0 g 0 0 0 0 0 251.0 0.0 831.0 0.0 568.0 0.0 0.0 0.0 53.0 164.0 0 0 0 0 t 0 0 0 0 0 35.0 999.0 168.0 1.0 54.0 999.0 0.0 0.0 621.0 151.0 0 0 0 0
MA1144.1_shift4 (FOSL2::JUND)				; dyads_m48 versus MA1144.1 (FOSL2::JUND); m=10/33; ncol2=10; w=10; offset=0; strand=D; shift=4; score=0.854696; ----krTGAsTCAy----- ; cor=; Ncor= a 0 0 0 0 137.0 634.0 0.0 0.0 998.0 46.0 6.0 140.0 999.0 38.0 0 0 0 0 0 c 0 0 0 0 143.0 60.0 0.0 0.0 1.0 604.0 0.0 860.0 0.0 266.0 0 0 0 0 0 g 0 0 0 0 446.0 291.0 0.0 990.0 0.0 292.0 60.0 0.0 0.0 113.0 0 0 0 0 0 t 0 0 0 0 275.0 14.0 999.0 10.0 0.0 58.0 934.0 0.0 0.0 583.0 0 0 0 0 0
MA0099.3_rc_shift4 (FOS::JUN_rc)				; dyads_m48 versus MA0099.3_rc (FOS::JUN_rc); m=11/33; ncol2=10; w=10; offset=0; strand=R; shift=4; score=0.846297; ----krTGACTCAy----- ; cor=; Ncor= a 0 0 0 0 162.0 568.0 4.0 4.0 991.0 54.0 45.0 168.0 990.0 40.0 0 0 0 0 0 c 0 0 0 0 164.0 95.0 2.0 3.0 2.0 688.0 4.0 824.0 2.0 257.0 0 0 0 0 0 g 0 0 0 0 397.0 313.0 2.0 963.0 2.0 180.0 131.0 1.0 5.0 111.0 0 0 0 0 0 t 0 0 0 0 277.0 24.0 992.0 30.0 5.0 78.0 820.0 7.0 3.0 592.0 0 0 0 0 0
MA1142.1_shift4 (FOSL1::JUND)				; dyads_m48 versus MA1142.1 (FOSL1::JUND); m=12/33; ncol2=10; w=10; offset=0; strand=D; shift=4; score= 0.8296; ----rrTGActmAt----- ; cor=; Ncor= a 0 0 0 0 265.0 551.0 30.0 22.0 864.0 49.0 98.0 270.0 912.0 174.0 0 0 0 0 0 c 0 0 0 0 221.0 127.0 23.0 61.0 12.0 581.0 45.0 641.0 40.0 212.0 0 0 0 0 0 g 0 0 0 0 279.0 282.0 34.0 777.0 82.0 191.0 187.0 25.0 17.0 144.0 0 0 0 0 0 t 0 0 0 0 235.0 40.0 913.0 140.0 41.0 180.0 669.0 64.0 31.0 470.0 0 0 0 0 0
MA0478.1_shift3 (FOSL2)				; dyads_m48 versus MA0478.1 (FOSL2); m=13/33; ncol2=11; w=10; offset=-1; strand=D; shift=3; score=0.799895; ---krrTGAsTCAb----- ; cor=; Ncor= a 0 0 0 833.0 1525.0 2861.0 0.0 0.0 5075.0 0.0 0.0 205.0 5318.0 0.0 0 0 0 0 0 c 0 0 0 994.0 592.0 55.0 0.0 0.0 51.0 3286.0 0.0 5113.0 0.0 1399.0 0 0 0 0 0 g 0 0 0 2086.0 2707.0 2328.0 0.0 5318.0 192.0 1838.0 0.0 0.0 0.0 1933.0 0 0 0 0 0 t 0 0 0 1405.0 494.0 74.0 5318.0 0.0 0.0 194.0 5318.0 0.0 0.0 1986.0 0 0 0 0 0
MA1132.1_shift4 (JUN::JUNB)				; dyads_m48 versus MA1132.1 (JUN::JUNB); m=14/33; ncol2=10; w=10; offset=0; strand=D; shift=4; score=0.790956; ----kaTGACkCAt----- ; cor=; Ncor= a 0 0 0 0 203.0 627.0 11.0 10.0 944.0 27.0 58.0 161.0 931.0 188.0 0 0 0 0 0 c 0 0 0 0 128.0 134.0 10.0 21.0 10.0 826.0 24.0 707.0 24.0 248.0 0 0 0 0 0 g 0 0 0 0 408.0 189.0 34.0 921.0 28.0 115.0 353.0 10.0 18.0 64.0 0 0 0 0 0 t 0 0 0 0 261.0 50.0 946.0 47.0 18.0 33.0 565.0 122.0 27.0 500.0 0 0 0 0 0
MA0477.2_shift3 (FOSL1)				; dyads_m48 versus MA0477.2 (FOSL1); m=15/33; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.784543; ---draTGACTCAthy--- ; cor=; Ncor= a 0 0 0 14979.0 15921.0 35056.0 260.0 515.0 56806.0 2557.0 1060.0 3133.0 56408.0 2716.0 14671.0 13956.0 0 0 0 c 0 0 0 12491.0 11018.0 6703.0 460.0 301.0 287.0 43918.0 163.0 53711.0 344.0 10399.0 15640.0 17637.0 0 0 0 g 0 0 0 14848.0 16855.0 13127.0 183.0 54619.0 286.0 8615.0 598.0 278.0 566.0 6533.0 12314.0 11065.0 0 0 0 t 0 0 0 15363.0 13887.0 2795.0 56778.0 2246.0 302.0 2591.0 55860.0 559.0 363.0 38033.0 15056.0 15023.0 0 0 0
MA1137.1_shift3 (FOSL1::JUNB)				; dyads_m48 versus MA1137.1 (FOSL1::JUNB); m=16/33; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.781095; ---ykrTGAcTMAtmc--- ; cor=; Ncor= a 0 0 0 237.0 216.0 566.0 23.0 36.0 917.0 63.0 59.0 271.0 904.0 53.0 300.0 247.0 0 0 0 c 0 0 0 269.0 146.0 100.0 16.0 21.0 20.0 626.0 23.0 683.0 21.0 225.0 298.0 300.0 0 0 0 g 0 0 0 195.0 376.0 287.0 16.0 880.0 21.0 198.0 115.0 9.0 38.0 170.0 204.0 223.0 0 0 0 t 0 0 0 300.0 263.0 47.0 945.0 63.0 42.0 113.0 803.0 37.0 37.0 552.0 198.0 230.0 0 0 0
MA1141.1_rc_shift3 (FOS::JUND_rc)				; dyads_m48 versus MA1141.1_rc (FOS::JUND_rc); m=17/33; ncol2=13; w=11; offset=-1; strand=R; shift=3; score=0.773205; ---bkrTGACTCAymm--- ; cor=; Ncor= a 0 0 0 180.0 185.0 612.0 0.0 0.0 999.0 19.0 15.0 129.0 999.0 38.0 263.0 258.0 0 0 0 c 0 0 0 292.0 195.0 77.0 0.0 0.0 0.0 867.0 0.0 871.0 0.0 266.0 389.0 315.0 0 0 0 g 0 0 0 264.0 370.0 290.0 0.0 970.0 0.0 40.0 91.0 0.0 1.0 104.0 167.0 244.0 0 0 0 t 0 0 0 264.0 250.0 21.0 999.0 29.0 0.0 75.0 894.0 0.0 0.0 593.0 182.0 183.0 0 0 0
MA1128.1_shift3 (FOSL1::JUN)				; dyads_m48 versus MA1128.1 (FOSL1::JUN); m=18/33; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.771764; ---kkrTGACTCAtmm--- ; cor=; Ncor= a 0 0 0 208.0 172.0 602.0 1.0 3.0 994.0 26.0 33.0 159.0 984.0 57.0 296.0 277.0 0 0 0 c 0 0 0 246.0 159.0 89.0 2.0 2.0 2.0 826.0 2.0 835.0 4.0 245.0 308.0 289.0 0 0 0 g 0 0 0 253.0 380.0 283.0 1.0 957.0 2.0 51.0 140.0 2.0 9.0 119.0 173.0 237.0 0 0 0 t 0 0 0 293.0 289.0 26.0 996.0 38.0 3.0 97.0 826.0 4.0 4.0 579.0 223.0 196.0 0 0 0
MA0491.2_shift3 (JUND)				; dyads_m48 versus MA0491.2 (JUND); m=19/33; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.769423; ---wraTGACTCAThh--- ; cor=; Ncor= a 0 0 0 28467.0 29234.0 70166.0 644.0 1365.0 103797.0 4634.0 2053.0 4915.0 103420.0 2796.0 27969.0 28212.0 0 0 0 c 0 0 0 21965.0 19712.0 10173.0 757.0 873.0 650.0 76028.0 496.0 98628.0 751.0 12025.0 28250.0 29793.0 0 0 0 g 0 0 0 25006.0 31347.0 20586.0 443.0 99787.0 573.0 20633.0 1147.0 953.0 965.0 7908.0 22249.0 19236.0 0 0 0 t 0 0 0 30507.0 25652.0 5020.0 104101.0 3920.0 925.0 4650.0 102249.0 1449.0 809.0 83216.0 27477.0 28704.0 0 0 0
MA0490.2_shift3 (JUNB)				; dyads_m48 versus MA0490.2 (JUNB); m=20/33; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.76231; ---wdATGACTCATwh--- ; cor=; Ncor= a 0 0 0 22772.0 23561.0 56607.0 538.0 770.0 78101.0 4755.0 1999.0 5243.0 77675.0 3722.0 21544.0 21137.0 0 0 0 c 0 0 0 16583.0 15807.0 7817.0 654.0 550.0 523.0 59784.0 289.0 73199.0 588.0 8876.0 19230.0 20653.0 0 0 0 g 0 0 0 18150.0 20403.0 11566.0 322.0 74757.0 550.0 10519.0 913.0 617.0 900.0 7508.0 16491.0 15068.0 0 0 0 t 0 0 0 22351.0 20085.0 3866.0 78342.0 3779.0 682.0 4798.0 76655.0 797.0 693.0 59750.0 22591.0 22998.0 0 0 0
MA1633.1_shift4 (BACH1)				; dyads_m48 versus MA1633.1 (BACH1); m=21/33; ncol2=13; w=11; offset=0; strand=D; shift=4; score=0.75912; ----saTGACTCAGCaw-- ; cor=; Ncor= a 0 0 0 0 3257.0 6929.0 105.0 97.0 15046.0 443.0 650.0 576.0 14778.0 339.0 769.0 8799.0 4492.0 0 0 c 0 0 0 0 3946.0 3833.0 267.0 149.0 230.0 12597.0 220.0 14563.0 194.0 623.0 13382.0 2167.0 3574.0 0 0 g 0 0 0 0 4835.0 3848.0 149.0 14831.0 167.0 2083.0 266.0 178.0 310.0 13050.0 858.0 1971.0 3553.0 0 0 t 0 0 0 0 3519.0 947.0 15036.0 480.0 114.0 434.0 14421.0 240.0 275.0 1545.0 548.0 2620.0 3938.0 0 0
MA1622.1_shift2 (Smad2::Smad3)				; dyads_m48 versus MA1622.1 (Smad2::Smad3); m=22/33; ncol2=14; w=11; offset=-2; strand=D; shift=2; score=0.750934; --rtkrTGACTCAtwm--- ; cor=; Ncor= a 0 0 2995.0 2508.0 2499.0 4451.0 79.0 90.0 10141.0 627.0 247.0 711.0 10056.0 683.0 2948.0 2746.0 0 0 0 c 0 0 2254.0 2515.0 1642.0 2212.0 59.0 82.0 44.0 7480.0 53.0 9443.0 85.0 2047.0 2479.0 2595.0 0 0 0 g 0 0 2615.0 2324.0 3479.0 2888.0 56.0 9768.0 58.0 1542.0 68.0 90.0 79.0 1979.0 2154.0 2524.0 0 0 0 t 0 0 2481.0 2998.0 2725.0 794.0 10151.0 405.0 102.0 696.0 9977.0 101.0 125.0 5636.0 2764.0 2480.0 0 0 0
MA0655.1_shift5 (JDP2)				; dyads_m48 versus MA0655.1 (JDP2); m=23/33; ncol2=9; w=9; offset=1; strand=D; shift=5; score=0.723644; -----ATGASTCAT----- ; cor=; Ncor= a 0 0 0 0 0 1634.0 5.0 0.0 1634.0 14.0 6.0 22.0 1634.0 22.0 0 0 0 0 0 c 0 0 0 0 0 19.0 6.0 3.0 1.0 1200.0 0.0 1634.0 0.0 404.0 0 0 0 0 0 g 0 0 0 0 0 140.0 1.0 1634.0 2.0 434.0 6.0 3.0 0.0 5.0 0 0 0 0 0 t 0 0 0 0 0 8.0 1634.0 22.0 25.0 13.0 1634.0 9.0 7.0 1634.0 0 0 0 0 0
MA0496.3_shift3 (MAFK)				; dyads_m48 versus MA0496.3 (MAFK); m=24/33; ncol2=15; w=11; offset=-1; strand=D; shift=3; score=0.653842; ---tgmTGACTCAGCmww- ; cor=; Ncor= a 0 0 0 11946.0 9602.0 14089.0 1616.0 1108.0 47484.0 2492.0 2722.0 1818.0 47675.0 1439.0 2664.0 24802.0 15933.0 14818.0 0 c 0 0 0 10789.0 10655.0 27000.0 1568.0 1366.0 1670.0 39125.0 1133.0 47872.0 882.0 1921.0 43458.0 14138.0 10737.0 9756.0 0 g 0 0 0 9969.0 21904.0 6706.0 1058.0 46695.0 1306.0 7573.0 1081.0 957.0 1267.0 44013.0 3327.0 4590.0 10512.0 8541.0 0 t 0 0 0 19030.0 9573.0 3939.0 47492.0 2565.0 1274.0 2544.0 46798.0 1087.0 1910.0 4361.0 2285.0 8204.0 14552.0 18619.0 0
MA0489.1_rc_shift5 (JUN(var.2)_rc)				; dyads_m48 versus MA0489.1_rc (JUN(var.2)_rc); m=25/33; ncol2=14; w=10; offset=1; strand=R; shift=5; score=0.641309; -----aTGAsTCAyyyyyy ; cor=; Ncor= a 0 0 0 0 0 5426.0 0.0 0.0 10757.0 780.0 3.0 0.0 10956.0 0.0 2004.0 1977.0 1773.0 1595.0 2036.0 c 0 0 0 0 0 2645.0 0.0 0.0 0.0 4090.0 0.0 10956.0 0.0 4033.0 4213.0 3461.0 4330.0 4110.0 2818.0 g 0 0 0 0 0 2509.0 0.0 10000.0 0.0 5704.0 0.0 0.0 0.0 993.0 593.0 1122.0 1127.0 1324.0 1250.0 t 0 0 0 0 0 376.0 10956.0 956.0 199.0 382.0 10953.0 0.0 0.0 5930.0 4146.0 4396.0 3726.0 3927.0 4852.0
MA0591.1_shift2 (Bach1::Mafk)				; dyads_m48 versus MA0591.1 (Bach1::Mafk); m=26/33; ncol2=15; w=11; offset=-2; strand=D; shift=2; score=0.624857; --rssrTGACTCAGCAs-- ; cor=; Ncor= a 0 0 45.0 14.0 15.0 66.0 2.0 0.0 113.0 0.0 1.0 5.0 108.0 0.0 0.0 98.0 12.0 0 0 c 0 0 14.0 36.0 41.0 16.0 1.0 0.0 0.0 94.0 0.0 107.0 1.0 1.0 114.0 4.0 42.0 0 0 g 0 0 41.0 46.0 54.0 32.0 0.0 107.0 0.0 20.0 4.0 2.0 3.0 113.0 0.0 6.0 38.0 0 0 t 0 0 14.0 18.0 4.0 0.0 111.0 7.0 1.0 0.0 109.0 0.0 2.0 0.0 0.0 6.0 22.0 0 0
MA0150.2_shift1 (Nfe2l2)				; dyads_m48 versus MA0150.2 (Nfe2l2); m=27/33; ncol2=15; w=11; offset=-3; strand=D; shift=1; score=0.606222; -casmrTGACTCAGCA--- ; cor=; Ncor= a 0 166.0 401.0 118.0 203.0 488.0 0.0 0.0 726.0 20.0 84.0 65.0 577.0 10.0 4.0 623.0 0 0 0 c 0 338.0 78.0 239.0 247.0 28.0 0.0 0.0 0.0 533.0 20.0 549.0 3.0 11.0 699.0 26.0 0 0 0 g 0 109.0 159.0 275.0 152.0 205.0 0.0 711.0 0.0 118.0 16.0 46.0 90.0 698.0 19.0 31.0 0 0 0 t 0 113.0 88.0 94.0 124.0 5.0 726.0 15.0 0.0 55.0 606.0 66.0 56.0 7.0 4.0 46.0 0 0 0
MA0089.2_shift2 (NFE2L1)				; dyads_m48 versus MA0089.2 (NFE2L1); m=28/33; ncol2=16; w=11; offset=-2; strand=D; shift=2; score=0.580729; --avmATGACTCAGCAaw- ; cor=; Ncor= a 0 0 1244.0 878.0 992.0 2582.0 12.0 17.0 3336.0 51.0 218.0 185.0 3171.0 57.0 16.0 2857.0 1362.0 1145.0 0 c 0 0 703.0 946.0 853.0 57.0 5.0 7.0 4.0 2864.0 12.0 3049.0 9.0 18.0 3281.0 64.0 517.0 224.0 0 g 0 0 671.0 1050.0 742.0 706.0 2.0 3308.0 10.0 358.0 35.0 25.0 78.0 3018.0 33.0 142.0 694.0 305.0 0 t 0 0 738.0 482.0 769.0 11.0 3337.0 24.0 6.0 83.0 3091.0 97.0 98.0 263.0 26.0 293.0 783.0 1682.0 0
MA1521.1_shift2 (MAFA)				; dyads_m48 versus MA1521.1 (MAFA); m=29/33; ncol2=15; w=11; offset=-2; strand=D; shift=2; score=0.550786; --dTGCTGAsTCAGCah-- ; cor=; Ncor= a 0 0 2273.0 673.0 304.0 970.0 973.0 668.0 7498.0 602.0 1281.0 1204.0 8128.0 473.0 26.0 6132.0 2465.0 0 0 c 0 0 1563.0 1857.0 206.0 7939.0 986.0 475.0 1615.0 3985.0 240.0 7985.0 453.0 104.0 8371.0 223.0 2126.0 0 0 g 0 0 2152.0 316.0 8343.0 185.0 451.0 8028.0 317.0 4024.0 1781.0 422.0 889.0 7957.0 221.0 1956.0 1532.0 0 0 t 0 0 2475.0 6277.0 119.0 540.0 8138.0 1291.0 1231.0 657.0 7524.0 715.0 1123.0 973.0 258.0 802.0 2340.0 0 0
MA1520.1_rc_shift2 (MAF_rc)				; dyads_m48 versus MA1520.1_rc (MAF_rc); m=30/33; ncol2=15; w=11; offset=-2; strand=R; shift=2; score=0.546827; --wTGCTGAsTCAGCAw-- ; cor=; Ncor= a 0 0 955.0 210.0 66.0 329.0 359.0 301.0 2715.0 344.0 432.0 682.0 2859.0 219.0 8.0 2397.0 922.0 0 0 c 0 0 486.0 562.0 56.0 2821.0 314.0 156.0 404.0 1431.0 116.0 2739.0 116.0 53.0 2938.0 51.0 587.0 0 0 g 0 0 575.0 72.0 2964.0 51.0 103.0 2776.0 89.0 1277.0 343.0 185.0 243.0 2837.0 45.0 516.0 516.0 0 0 t 0 0 977.0 2353.0 48.0 216.0 2904.0 609.0 529.0 387.0 2712.0 316.0 439.0 364.0 80.0 213.0 968.0 0 0
MA0501.1_shift5 (MAF::NFE2)				; dyads_m48 versus MA0501.1 (MAF::NFE2); m=31/33; ncol2=15; w=10; offset=1; strand=D; shift=5; score=0.529604; -----rTGACTCAGCArww ; cor=; Ncor= a 0 0 0 0 0 726.0 0.0 0.0 1090.0 16.0 110.0 80.0 978.0 8.0 0.0 931.0 383.0 361.0 292.0 c 0 0 0 0 0 26.0 0.0 0.0 0.0 871.0 1.0 937.0 0.0 4.0 1063.0 17.0 203.0 100.0 102.0 g 0 0 0 0 0 334.0 0.0 1082.0 0.0 166.0 12.0 22.0 51.0 1041.0 22.0 73.0 283.0 130.0 91.0 t 0 0 0 0 0 4.0 1090.0 8.0 0.0 37.0 967.0 51.0 61.0 37.0 5.0 69.0 221.0 499.0 605.0
MA1101.2_shift0 (BACH2)				; dyads_m48 versus MA1101.2 (BACH2); m=32/33; ncol2=19; w=11; offset=-4; strand=D; shift=0; score=0.502919; awasCATGAsTCATsvtwt ; cor=; Ncor= a 26746.0 38327.0 59307.0 12404.0 9369.0 62993.0 1.0 6.0 67846.0 50.0 3.0 115.0 68264.0 47.0 4522.0 19650.0 18457.0 23586.0 15261.0 c 12203.0 8823.0 5534.0 21218.0 61580.0 260.0 7.0 0.0 1088.0 37438.0 20.0 68215.0 2.0 11634.0 35220.0 17682.0 13438.0 10703.0 15623.0 g 13720.0 9605.0 8490.0 21257.0 6727.0 15304.0 1.0 68240.0 13.0 30785.0 856.0 0.0 11.0 2028.0 30498.0 19155.0 7650.0 8221.0 11268.0 t 15601.0 24469.0 15405.0 13391.0 8116.0 0.0 68266.0 54.0 6.0 18.0 67975.0 3.0 0.0 63746.0 5274.0 11783.0 54749.0 39012.0 26118.0
MA0067.1_rc_shift3 (Pax2_rc)				; dyads_m48 versus MA0067.1_rc (Pax2_rc); m=33/33; ncol2=8; w=7; offset=-1; strand=R; shift=3; score=0.43533; ---vmrTGAcw-------- ; cor=; Ncor= a 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 0 0 0 0 0 0 c 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 0 0 0 0 0 0 g 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 0 0 0 0 0 0 t 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv4_m2_shift2 ; 54 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv4_m2_shift2 (oligos_6nt_mkv4_m2oligos_6nt_mkv4_m2)				; oligos_6nt_mkv4_m2 (oligos_6nt_mkv4_m2oligos_6nt_mkv4_m2); m=0 (reference); ncol1=12; shift=2; ncol=16; --sssCACCTGTbc-- ; Alignment reference a 0 0 1160 1218 1422 24 6014 13 31 2 15 5 295 1417 0 0 c 0 0 1810 1811 1595 6014 8 5981 5932 39 9 78 2373 2196 0 0 g 0 0 1668 1770 2461 39 70 70 124 42 6071 7 1580 1258 0 0 t 0 0 1465 1304 625 26 11 39 16 6020 8 6013 1855 1232 0 0
MA1620.1_shift2 (Ptf1a(var.3))				; oligos_6nt_mkv4_m2 versus MA1620.1 (Ptf1a(var.3)); m=1/53; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.945402; --rmaCACCTGtky-- ; cor=; Ncor= a 0 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 0 c 0 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 0 g 0 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 0 t 0 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0 0
MA0745.2_shift2 (SNAI2)				; oligos_6nt_mkv4_m2 versus MA0745.2 (SNAI2); m=2/53; ncol2=13; w=12; offset=0; strand=D; shift=2; score=0.900743; --aygCACCTGTmry- ; cor=; Ncor= a 0 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 0 c 0 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 0 g 0 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 0 t 0 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0 0
MA0499.2_shift2 (MYOD1)				; oligos_6nt_mkv4_m2 versus MA0499.2 (MYOD1); m=3/53; ncol2=13; w=12; offset=0; strand=D; shift=2; score=0.898413; --cwgCACCTGTymy- ; cor=; Ncor= a 0 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 0 c 0 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 0 g 0 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 0 t 0 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0 0
MA0103.3_shift3 (ZEB1)				; oligos_6nt_mkv4_m2 versus MA0103.3 (ZEB1); m=4/53; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.815121; ---ssCACCTGsss-- ; cor=; Ncor= a 0 0 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 0 c 0 0 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 0 g 0 0 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 0 t 0 0 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0 0
MA1621.1_shift1 (Rbpjl)				; oligos_6nt_mkv4_m2 versus MA1621.1 (Rbpjl); m=5/53; ncol2=14; w=12; offset=-1; strand=D; shift=1; score=0.812858; -svmaCACCTGtsyc- ; cor=; Ncor= a 0 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 0 c 0 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 0 g 0 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 0 t 0 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0 0
MA0830.2_shift2 (TCF4)				; oligos_6nt_mkv4_m2 versus MA0830.2 (TCF4); m=6/53; ncol2=13; w=12; offset=0; strand=D; shift=2; score=0.796895; --cggCACCTGccss- ; cor=; Ncor= a 0 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 0 c 0 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 0 g 0 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 0 t 0 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0 0
MA1559.1_rc_shift3 (SNAI3_rc)				; oligos_6nt_mkv4_m2 versus MA1559.1_rc (SNAI3_rc); m=7/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.782173; ---trCACCTGyt--- ; cor=; Ncor= a 0 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 0 c 0 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 0 g 0 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 0 t 0 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0 0
MA1619.1_shift2 (Ptf1a(var.2))				; oligos_6nt_mkv4_m2 versus MA1619.1 (Ptf1a(var.2)); m=8/53; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.773894; --rmaCAGCTGtky-- ; cor=; Ncor= a 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 0 c 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 0 g 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 0 t 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0 0
MA1641.1_rc_shift2 (MYF5_rc)				; oligos_6nt_mkv4_m2 versus MA1641.1_rc (MYF5_rc); m=9/53; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.769855; --gvaCAGCTGtbc-- ; cor=; Ncor= a 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 0 c 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 0 g 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 0 t 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0 0
MA1631.1_shift2 (ASCL1(var.2))				; oligos_6nt_mkv4_m2 versus MA1631.1 (ASCL1(var.2)); m=10/53; ncol2=13; w=12; offset=0; strand=D; shift=2; score=0.768434; --cdgCACCTGCysc- ; cor=; Ncor= a 0 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 0 c 0 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 0 g 0 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 0 t 0 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0 0
MA0521.1_rc_shift2 (Tcf12_rc)				; oligos_6nt_mkv4_m2 versus MA0521.1_rc (Tcf12_rc); m=11/53; ncol2=11; w=11; offset=0; strand=R; shift=2; score=0.763704; --cwsCAGCTGYy--- ; cor=; Ncor= a 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 0 c 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 0 g 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 0 t 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0 0
MA1558.1_rc_shift3 (SNAI1_rc)				; oligos_6nt_mkv4_m2 versus MA1558.1_rc (SNAI1_rc); m=12/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.755936; ---yrCACCTGyh--- ; cor=; Ncor= a 0 0 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 0 c 0 0 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 0 g 0 0 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 0 t 0 0 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0 0
MA0820.1_shift3 (FIGLA)				; oligos_6nt_mkv4_m2 versus MA0820.1 (FIGLA); m=13/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.755118; ---wmCACCTGkw--- ; cor=; Ncor= a 0 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 0 c 0 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 0 g 0 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 0 t 0 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0 0
MA0783.1_rc_shift2 (PKNOX2_rc)				; oligos_6nt_mkv4_m2 versus MA0783.1_rc (PKNOX2_rc); m=14/53; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.748697; --TGACAsCTGTCA-- ; cor=; Ncor= a 0 0 9.0 3.0 1167.0 0.0 1204.0 0.0 118.0 4.0 9.0 6.0 0.0 1192.0 0 0 c 0 0 21.0 6.0 5.0 1370.0 0.0 702.0 1298.0 1.0 0.0 13.0 1389.0 9.0 0 0 g 0 0 1.0 1265.0 29.0 1.0 4.0 304.0 0.0 0.0 1250.0 3.0 6.0 0.0 0 0 t 0 0 1190.0 11.0 10.0 3.0 0.0 39.0 7.0 1169.0 0.0 1124.0 1.0 37.0 0 0
MA1648.1_shift3 (TCF12(var.2))				; oligos_6nt_mkv4_m2 versus MA1648.1 (TCF12(var.2)); m=15/53; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.742462; ---ssCACCTGCys-- ; cor=; Ncor= a 0 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 0 c 0 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 0 g 0 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 0 t 0 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0 0
MA0522.3_shift3 (TCF3)				; oligos_6nt_mkv4_m2 versus MA0522.3 (TCF3); m=16/53; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.738658; ---svCACCTGCss-- ; cor=; Ncor= a 0 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 0 c 0 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 0 g 0 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 0 t 0 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0 0
MA0500.2_shift2 (MYOG)				; oligos_6nt_mkv4_m2 versus MA0500.2 (MYOG); m=17/53; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.719108; --sarCAGCTGyts-- ; cor=; Ncor= a 0 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 0 c 0 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 0 g 0 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 0 t 0 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0 0
MA1618.1_rc_shift1 (Ptf1a_rc)				; oligos_6nt_mkv4_m2 versus MA1618.1_rc (Ptf1a_rc); m=18/53; ncol2=13; w=12; offset=-1; strand=R; shift=1; score=0.702529; -dmaaCATCTGtkh-- ; cor=; Ncor= a 0 3622.0 3685.0 8294.0 8564.0 210.0 13973.0 148.0 653.0 106.0 172.0 726.0 2735.0 3699.0 0 0 c 0 3376.0 3664.0 2295.0 2854.0 13868.0 118.0 437.0 13072.0 153.0 130.0 2414.0 3568.0 3661.0 0 0 g 0 3689.0 3601.0 2341.0 2058.0 122.0 224.0 1724.0 466.0 118.0 14006.0 2747.0 3662.0 2989.0 0 0 t 0 3754.0 3491.0 1511.0 965.0 241.0 126.0 12132.0 250.0 14064.0 133.0 8554.0 4476.0 4092.0 0 0
MA1109.1_rc_shift1 (NEUROD1_rc)				; oligos_6nt_mkv4_m2 versus MA1109.1_rc (NEUROD1_rc); m=19/53; ncol2=13; w=12; offset=-1; strand=R; shift=1; score=0.688058; -syrCCATCTGtyc-- ; cor=; Ncor= a 0 525.0 451.0 580.0 168.0 31.0 2157.0 21.0 90.0 18.0 12.0 47.0 298.0 566.0 0 0 c 0 628.0 599.0 418.0 1962.0 2231.0 19.0 77.0 2152.0 16.0 13.0 494.0 906.0 726.0 0 0 g 0 591.0 540.0 911.0 93.0 7.0 51.0 150.0 24.0 7.0 2240.0 452.0 323.0 429.0 0 0 t 0 538.0 692.0 373.0 59.0 13.0 55.0 2034.0 16.0 2241.0 17.0 1289.0 755.0 561.0 0 0
MA1642.1_rc_shift2 (NEUROG2(var.2)_rc)				; oligos_6nt_mkv4_m2 versus MA1642.1_rc (NEUROG2(var.2)_rc); m=20/53; ncol2=13; w=12; offset=0; strand=R; shift=2; score=0.675845; --brCCATCTGtyyy- ; cor=; Ncor= a 0 0 7184.0 9704.0 4904.0 484.0 32515.0 275.0 2806.0 159.0 237.0 1750.0 4721.0 8378.0 7535.0 0 c 0 0 8709.0 7581.0 24998.0 33422.0 323.0 418.0 30392.0 301.0 317.0 8039.0 11114.0 10123.0 10813.0 0 g 0 0 9034.0 10441.0 2966.0 205.0 904.0 952.0 793.0 211.0 33559.0 8154.0 6467.0 6843.0 7353.0 0 t 0 0 9464.0 6665.0 1523.0 280.0 649.0 32746.0 400.0 33720.0 278.0 16448.0 12089.0 9047.0 8690.0 0
MA0743.2_rc_shift2 (SCRT1_rc)				; oligos_6nt_mkv4_m2 versus MA0743.2_rc (SCRT1_rc); m=21/53; ncol2=16; w=12; offset=0; strand=R; shift=2; score=0.652164; --wacCACCTGTTGmw ; cor=; Ncor= a 0 0 19839.0 18454.0 13726.0 7910.0 57969.0 1579.0 1305.0 1058.0 215.0 1002.0 4017.0 2621.0 31975.0 24326.0 c 0 0 11049.0 13470.0 26973.0 41190.0 259.0 56500.0 51330.0 159.0 224.0 1566.0 1835.0 1297.0 16396.0 10154.0 g 0 0 12837.0 14903.0 8788.0 3296.0 1098.0 466.0 557.0 234.0 59557.0 370.0 8751.0 54835.0 7425.0 8693.0 t 0 0 16484.0 13382.0 10722.0 7813.0 883.0 1664.0 7017.0 58758.0 213.0 57271.0 45606.0 1456.0 4413.0 17036.0
MA0626.1_shift3 (Npas2)				; oligos_6nt_mkv4_m2 versus MA0626.1 (Npas2); m=22/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.646342; ---dsCACGTGtm--- ; cor=; Ncor= a 0 0 0 273.0 154.0 0.0 999.0 81.0 81.0 0.0 81.0 74.0 297.0 0 0 0 c 0 0 0 177.0 377.0 999.0 0.0 918.0 0.0 0.0 0.0 172.0 299.0 0 0 0 g 0 0 0 293.0 420.0 0.0 0.0 0.0 918.0 0.0 918.0 188.0 202.0 0 0 0 t 0 0 0 257.0 48.0 0.0 0.0 0.0 0.0 999.0 0.0 566.0 202.0 0 0 0
MA0744.2_rc_shift2 (SCRT2_rc)				; oligos_6nt_mkv4_m2 versus MA0744.2_rc (SCRT2_rc); m=23/53; ncol2=16; w=12; offset=0; strand=R; shift=2; score=0.640647; --waccACCTGTTGmw ; cor=; Ncor= a 0 0 21453.0 18751.0 15588.0 11335.0 58889.0 2140.0 1471.0 1184.0 204.0 953.0 4384.0 3732.0 17252.0 16873.0 c 0 0 12430.0 14716.0 25288.0 38133.0 1168.0 60636.0 56105.0 252.0 319.0 1878.0 2265.0 1339.0 35769.0 12473.0 g 0 0 13846.0 16085.0 11351.0 5661.0 3475.0 972.0 728.0 294.0 64856.0 413.0 5536.0 59161.0 7236.0 6319.0 t 0 0 17881.0 16058.0 13383.0 10481.0 2078.0 1862.0 7306.0 63880.0 231.0 62366.0 53425.0 1378.0 5353.0 29945.0
MA0819.1_rc_shift3 (CLOCK_rc)				; oligos_6nt_mkv4_m2 versus MA0819.1_rc (CLOCK_rc); m=24/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.638343; ---raCACGTGTt--- ; cor=; Ncor= a 0 0 0 174.0 429.0 9.0 429.0 0.0 28.0 0.0 2.0 13.0 75.0 0 0 0 c 0 0 0 39.0 110.0 429.0 5.0 429.0 0.0 15.0 2.0 89.0 93.0 0 0 0 g 0 0 0 128.0 152.0 3.0 5.0 0.0 429.0 5.0 429.0 85.0 35.0 0 0 0 t 0 0 0 89.0 1.0 0.0 3.0 40.0 16.0 429.0 11.0 429.0 226.0 0 0 0
MA1100.2_rc_shift3 (ASCL1_rc)				; oligos_6nt_mkv4_m2 versus MA1100.2_rc (ASCL1_rc); m=25/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.638259; ---rgCAGCTGyy--- ; cor=; Ncor= a 0 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 0 c 0 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 0 g 0 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 0 t 0 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0 0
MA1105.2_rc_shift3 (GRHL2_rc)				; oligos_6nt_mkv4_m2 versus MA1105.2_rc (GRHL2_rc); m=26/53; ncol2=12; w=11; offset=1; strand=R; shift=3; score=0.634847; ---maAACCTGTTyt- ; cor=; Ncor= a 0 0 0 13946.0 17515.0 36906.0 36921.0 625.0 1247.0 5826.0 320.0 1260.0 1618.0 6264.0 8493.0 0 c 0 0 0 10536.0 7961.0 1220.0 748.0 39624.0 37226.0 485.0 609.0 2841.0 2646.0 10776.0 9161.0 0 g 0 0 0 8528.0 9341.0 2000.0 2331.0 987.0 581.0 1543.0 40446.0 712.0 1147.0 6996.0 9741.0 0 t 0 0 0 8868.0 7061.0 1752.0 1878.0 642.0 2824.0 34024.0 503.0 37065.0 36467.0 17842.0 14483.0 0
MA1472.1_shift3 (BHLHA15(var.2))				; oligos_6nt_mkv4_m2 versus MA1472.1 (BHLHA15(var.2)); m=27/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.632314; ---avCAGCTGyy--- ; cor=; Ncor= a 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 0 c 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 0 g 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 0 t 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0 0
MA1493.1_shift3 (HES6)				; oligos_6nt_mkv4_m2 versus MA1493.1 (HES6); m=28/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.63031; ---GGCACGTGTy--- ; cor=; Ncor= a 0 0 0 12.0 16.0 17.0 439.0 2.0 10.0 0.0 0.0 33.0 79.0 0 0 0 c 0 0 0 39.0 35.0 439.0 0.0 439.0 12.0 7.0 0.0 21.0 152.0 0 0 0 g 0 0 0 439.0 439.0 19.0 9.0 9.0 439.0 29.0 439.0 0.0 0.0 0 0 0 t 0 0 0 43.0 13.0 15.0 11.0 16.0 0.0 439.0 0.0 439.0 209.0 0 0 0
MA1485.1_shift1 (FERD3L)				; oligos_6nt_mkv4_m2 versus MA1485.1 (FERD3L); m=29/53; ncol2=14; w=12; offset=-1; strand=D; shift=1; score=0.628779; -GyrmCAGCTGTyAC- ; cor=; Ncor= a 0 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 0 c 0 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 0 g 0 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 0 t 0 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0 0
MA1467.1_rc_shift3 (ATOH1(var.2)_rc)				; oligos_6nt_mkv4_m2 versus MA1467.1_rc (ATOH1(var.2)_rc); m=30/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.620299; ---RACAGCTGTT--- ; cor=; Ncor= a 0 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 g 0 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 t 0 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0
MA0665.1_shift3 (MSC)				; oligos_6nt_mkv4_m2 versus MA0665.1 (MSC); m=31/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.619003; ---AACAGCTGTT--- ; cor=; Ncor= a 0 0 0 69.0 69.0 0.0 69.0 0.0 0.0 0.0 0.0 3.0 0.0 0 0 0 c 0 0 0 0.0 12.0 69.0 0.0 12.0 69.0 0.0 0.0 10.0 9.0 0 0 0 g 0 0 0 18.0 3.0 3.0 0.0 69.0 3.0 0.0 69.0 4.0 4.0 0 0 0 t 0 0 0 7.0 0.0 1.0 0.0 0.0 0.0 69.0 4.0 69.0 69.0 0 0 0
MA0667.1_shift3 (MYF6)				; oligos_6nt_mkv4_m2 versus MA0667.1 (MYF6); m=32/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.617389; ---AACArCTGTY--- ; cor=; Ncor= a 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 0 0 c 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 0 0 g 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 0 0 t 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0 0 0
MA1108.2_shift3 (MXI1)				; oligos_6nt_mkv4_m2 versus MA1108.2 (MXI1); m=33/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.610545; ---rvCACATGkc--- ; cor=; Ncor= a 0 0 0 5786.0 6184.0 109.0 21870.0 10.0 20506.0 0.0 527.0 2833.0 4945.0 0 0 0 c 0 0 0 4724.0 5841.0 21382.0 1.0 21552.0 0.0 507.0 114.0 5329.0 6343.0 0 0 0 g 0 0 0 6326.0 6078.0 97.0 170.0 18.0 1542.0 0.0 21232.0 7228.0 5394.0 0 0 0 t 0 0 0 5212.0 3945.0 460.0 7.0 468.0 0.0 21541.0 175.0 6658.0 5366.0 0 0 0
MA0823.1_rc_shift3 (HEY1_rc)				; oligos_6nt_mkv4_m2 versus MA0823.1_rc (HEY1_rc); m=34/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.60506; ---grCACGTGyc--- ; cor=; Ncor= a 0 0 0 318.0 863.0 22.0 3338.0 0.0 0.0 21.0 15.0 110.0 352.0 0 0 0 c 0 0 0 373.0 380.0 3338.0 10.0 3338.0 0.0 123.0 3.0 1199.0 1788.0 0 0 0 g 0 0 0 2172.0 1762.0 19.0 474.0 18.0 3338.0 30.0 3338.0 656.0 761.0 0 0 0 t 0 0 0 475.0 333.0 32.0 0.0 0.0 0.0 3338.0 1.0 1373.0 437.0 0 0 0
MA0825.1_rc_shift3 (MNT_rc)				; oligos_6nt_mkv4_m2 versus MA0825.1_rc (MNT_rc); m=35/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.599238; ---rgCACGTGbt--- ; cor=; Ncor= a 0 0 0 219.0 120.0 25.0 681.0 0.0 16.0 21.0 5.0 63.0 129.0 0 0 0 c 0 0 0 75.0 131.0 681.0 15.0 681.0 7.0 0.0 0.0 203.0 145.0 0 0 0 g 0 0 0 229.0 281.0 0.0 0.0 0.0 681.0 0.0 681.0 228.0 128.0 0 0 0 t 0 0 0 159.0 150.0 0.0 0.0 15.0 0.0 681.0 27.0 187.0 279.0 0 0 0
MA0058.3_rc_shift3 (MAX_rc)				; oligos_6nt_mkv4_m2 versus MA0058.3_rc (MAX_rc); m=36/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.598958; ---rgCACGTGkt--- ; cor=; Ncor= a 0 0 0 2543.0 1446.0 36.0 6876.0 19.0 229.0 38.0 0.0 637.0 719.0 0 0 0 c 0 0 0 986.0 1638.0 6876.0 20.0 6876.0 7.0 87.0 0.0 1514.0 1295.0 0 0 0 g 0 0 0 2225.0 2450.0 27.0 159.0 39.0 6876.0 0.0 6876.0 2809.0 1556.0 0 0 0 t 0 0 0 1122.0 1341.0 0.0 69.0 329.0 0.0 6876.0 39.0 1915.0 3307.0 0 0 0
MA0100.3_shift3 (MYB)				; oligos_6nt_mkv4_m2 versus MA0100.3 (MYB); m=37/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.597971; ---mbCAACTGhm--- ; cor=; Ncor= a 0 0 0 425.0 292.0 0.0 1478.0 1519.0 0.0 1.0 8.0 401.0 422.0 0 0 0 c 0 0 0 422.0 428.0 1513.0 3.0 2.0 1527.0 60.0 3.0 482.0 528.0 0 0 0 g 0 0 0 300.0 397.0 5.0 39.0 0.0 0.0 68.0 1516.0 147.0 225.0 0 0 0 t 0 0 0 380.0 410.0 9.0 7.0 6.0 0.0 1398.0 0.0 497.0 352.0 0 0 0
MA1635.1_rc_shift3 (BHLHE22(var.2)_rc)				; oligos_6nt_mkv4_m2 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=38/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.595903; ---csCAGCTGsg--- ; cor=; Ncor= a 0 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 0 c 0 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 0 g 0 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 0 t 0 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0 0
MA1638.1_rc_shift3 (HAND2_rc)				; oligos_6nt_mkv4_m2 versus MA1638.1_rc (HAND2_rc); m=39/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.594707; ---rvCATCTGkt--- ; cor=; Ncor= a 0 0 0 7783.0 8498.0 49.0 27962.0 23.0 85.0 4.0 70.0 3155.0 7120.0 0 0 0 c 0 0 0 6108.0 8878.0 29851.0 31.0 38.0 30144.0 647.0 132.0 6994.0 7463.0 0 0 0 g 0 0 0 10227.0 7690.0 149.0 2276.0 30.0 42.0 410.0 30062.0 11298.0 5564.0 0 0 0 t 0 0 0 6165.0 5217.0 234.0 14.0 30192.0 12.0 29222.0 19.0 8836.0 10136.0 0 0 0
MA1570.1_rc_shift3 (TFAP4(var.2)_rc)				; oligos_6nt_mkv4_m2 versus MA1570.1_rc (TFAP4(var.2)_rc); m=40/53; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.59309; ---amCAyrTGdt--- ; cor=; Ncor= a 0 0 0 479.0 206.0 0.0 479.0 0.0 479.0 0.0 0.0 129.0 39.0 0 0 0 c 0 0 0 110.0 156.0 479.0 0.0 287.0 161.0 14.0 0.0 0.0 197.0 0 0 0 g 0 0 0 210.0 14.0 3.0 0.0 149.0 220.0 0.0 479.0 144.0 130.0 0 0 0 t 0 0 0 60.0 103.0 0.0 0.0 479.0 0.0 479.0 0.0 217.0 479.0 0 0 0
MA0816.1_shift3 (Ascl2)				; oligos_6nt_mkv4_m2 versus MA0816.1 (Ascl2); m=41/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.590812; ---arCAGCTGyy--- ; cor=; Ncor= a 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 0 c 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 0 g 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 0 t 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0 0
MA0649.1_shift3 (HEY2)				; oligos_6nt_mkv4_m2 versus MA0649.1 (HEY2); m=42/53; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.586632; ---GrCACGTGyc--- ; cor=; Ncor= a 0 0 0 107.0 651.0 84.0 1800.0 7.0 27.0 36.0 0.0 50.0 285.0 0 0 0 c 0 0 0 99.0 305.0 1800.0 0.0 1800.0 72.0 120.0 34.0 1047.0 869.0 0 0 0 g 0 0 0 1800.0 620.0 83.0 128.0 0.0 1800.0 0.0 1800.0 128.0 382.0 0 0 0 t 0 0 0 101.0 224.0 58.0 0.0 0.0 0.0 1800.0 30.0 753.0 264.0 0 0 0
MA0807.1_rc_shift2 (TBX5_rc)				; oligos_6nt_mkv4_m2 versus MA0807.1_rc (TBX5_rc); m=43/53; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.570258; --TmACACCT------ ; cor=; Ncor= a 0 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 0 c 0 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 0 g 0 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 0 t 0 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0 0
MA0806.1_rc_shift2 (TBX4_rc)				; oligos_6nt_mkv4_m2 versus MA0806.1_rc (TBX4_rc); m=44/53; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.559628; --TcACACCT------ ; cor=; Ncor= a 0 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 0 0 0 0 c 0 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 0 0 0 0 g 0 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 0 0 0 0 t 0 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0 0 0 0 0
MA0803.1_rc_shift2 (TBX15_rc)				; oligos_6nt_mkv4_m2 versus MA0803.1_rc (TBX15_rc); m=45/53; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.536949; --TCACACCT------ ; cor=; Ncor= a 0 0 96.0 937.0 10502.0 0.0 10502.0 0.0 103.0 112.0 0 0 0 0 0 0 c 0 0 306.0 10502.0 324.0 10502.0 245.0 10502.0 10502.0 664.0 0 0 0 0 0 0 g 0 0 71.0 454.0 435.0 8.0 175.0 7.0 101.0 74.0 0 0 0 0 0 0 t 0 0 10502.0 44.0 140.0 0.0 61.0 19.0 458.0 10502.0 0 0 0 0 0 0
MA0805.1_rc_shift2 (TBX1_rc)				; oligos_6nt_mkv4_m2 versus MA0805.1_rc (TBX1_rc); m=46/53; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.522349; --TCACACCT------ ; cor=; Ncor= a 0 0 0.0 1039.0 11931.0 0.0 11931.0 0.0 669.0 564.0 0 0 0 0 0 0 c 0 0 18.0 11931.0 109.0 11931.0 141.0 11931.0 11931.0 1007.0 0 0 0 0 0 0 g 0 0 33.0 720.0 613.0 5.0 214.0 0.0 711.0 113.0 0 0 0 0 0 0 t 0 0 11931.0 141.0 142.0 0.0 28.0 0.0 1560.0 11931.0 0 0 0 0 0 0
MA0801.1_rc_shift2 (MGA_rc)				; oligos_6nt_mkv4_m2 versus MA0801.1_rc (MGA_rc); m=47/53; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.513008; --TCACACCT------ ; cor=; Ncor= a 0 0 274.0 6465.0 30489.0 11.0 30489.0 104.0 1929.0 4160.0 0 0 0 0 0 0 c 0 0 920.0 30489.0 381.0 30489.0 96.0 30489.0 30489.0 8873.0 0 0 0 0 0 0 g 0 0 110.0 1753.0 3089.0 1.0 3534.0 509.0 3737.0 1151.0 0 0 0 0 0 0 t 0 0 30489.0 689.0 1042.0 14.0 12.0 16.0 4310.0 30489.0 0 0 0 0 0 0
MA0622.1_shift4 (Mlxip)				; oligos_6nt_mkv4_m2 versus MA0622.1 (Mlxip); m=48/53; ncol2=8; w=8; offset=2; strand=D; shift=4; score=0.509757; ----bCACGTGk---- ; cor=; Ncor= a 0 0 0 0 53.0 0.0 999.0 0.0 0.0 0.0 0.0 188.0 0 0 0 0 c 0 0 0 0 263.0 999.0 0.0 999.0 0.0 0.0 0.0 63.0 0 0 0 0 g 0 0 0 0 421.0 0.0 0.0 0.0 999.0 0.0 999.0 250.0 0 0 0 0 t 0 0 0 0 263.0 0.0 0.0 0.0 0.0 999.0 0.0 499.0 0 0 0 0
MA1567.1_rc_shift1 (TBX6_rc)				; oligos_6nt_mkv4_m2 versus MA1567.1_rc (TBX6_rc); m=49/53; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.509334; -tTmACACcty----- ; cor=; Ncor= a 0 2330.0 713.0 5964.0 11087.0 12.0 11087.0 0.0 1058.0 2157.0 2456.0 0 0 0 0 0 c 0 2141.0 2251.0 11087.0 320.0 11087.0 0.0 11087.0 11087.0 3347.0 4003.0 0 0 0 0 0 g 0 2066.0 652.0 4876.0 3053.0 0.0 1002.0 63.0 2913.0 1173.0 1630.0 0 0 0 0 0 t 0 4550.0 11087.0 1430.0 552.0 14.0 44.0 58.0 1882.0 11087.0 2998.0 0 0 0 0 0
MA1566.1_rc_shift1 (TBX3_rc)				; oligos_6nt_mkv4_m2 versus MA1566.1_rc (TBX3_rc); m=50/53; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.499308; -ttsACACcty----- ; cor=; Ncor= a 0 578.0 484.0 1112.0 2544.0 0.0 2544.0 0.0 302.0 760.0 497.0 0 0 0 0 0 c 0 620.0 947.0 2544.0 155.0 2544.0 0.0 2544.0 2544.0 1207.0 1003.0 0 0 0 0 0 g 0 586.0 410.0 1471.0 634.0 0.0 735.0 45.0 862.0 481.0 399.0 0 0 0 0 0 t 0 760.0 2544.0 170.0 115.0 0.0 16.0 6.0 427.0 2544.0 644.0 0 0 0 0 0
MA0802.1_rc_shift0 (TBR1_rc)				; oligos_6nt_mkv4_m2 versus MA0802.1_rc (TBR1_rc); m=51/53; ncol2=10; w=8; offset=-2; strand=R; shift=0; score=0.455577; tTTCACACCT------ ; cor=; Ncor= a 5846.0 4576.0 205.0 7001.0 34509.0 4.0 34509.0 213.0 4480.0 1433.0 0 0 0 0 0 0 c 4537.0 1488.0 584.0 34509.0 157.0 34509.0 88.0 34509.0 34509.0 3329.0 0 0 0 0 0 0 g 5619.0 2575.0 90.0 2551.0 4742.0 6.0 1759.0 254.0 3255.0 359.0 0 0 0 0 0 0 t 18507.0 25869.0 34509.0 1175.0 2386.0 0.0 39.0 70.0 6880.0 34509.0 0 0 0 0 0 0
MA0774.1_rc_shift7 (MEIS2_rc)				; oligos_6nt_mkv4_m2 versus MA0774.1_rc (MEIS2_rc); m=52/53; ncol2=8; w=7; offset=5; strand=R; shift=7; score=0.415515; -------sCTGTCAa- ; cor=; Ncor= a 0 0 0 0 0 0 0 88.0 67.0 0.0 5.0 62.0 0.0 1351.0 1351.0 0 c 0 0 0 0 0 0 0 650.0 1351.0 4.0 0.0 25.0 1351.0 40.0 314.0 0 g 0 0 0 0 0 0 0 701.0 98.0 7.0 1351.0 3.0 0.0 3.0 264.0 0 t 0 0 0 0 0 0 0 157.0 83.0 1351.0 9.0 1351.0 0.0 31.0 408.0 0
MA0775.1_rc_shift7 (MEIS3_rc)				; oligos_6nt_mkv4_m2 versus MA0775.1_rc (MEIS3_rc); m=53/53; ncol2=8; w=7; offset=5; strand=R; shift=7; score=0.400837; -------scTGTCAw- ; cor=; Ncor= a 0 0 0 0 0 0 0 975.0 2094.0 145.0 160.0 53.0 0.0 7165.0 3451.0 0 c 0 0 0 0 0 0 0 2888.0 7165.0 468.0 8.0 455.0 7165.0 260.0 1788.0 0 g 0 0 0 0 0 0 0 2342.0 1889.0 8.0 7165.0 20.0 6.0 383.0 60.0 0 t 0 0 0 0 0 0 0 960.0 1690.0 7165.0 53.0 7165.0 0.0 465.0 1866.0 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m5_shift3 ; 47 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m5_shift3 (oligos_7nt_mkv5_m5oligos_7nt_mkv5_m5)				; oligos_7nt_mkv5_m5 (oligos_7nt_mkv5_m5oligos_7nt_mkv5_m5); m=0 (reference); ncol1=13; shift=3; ncol=16; ---rsAACAGGTGCys ; Alignment reference a 0 0 0 1099 832 3462 3723 17 3896 50 173 68 12 184 930 984 c 0 0 0 722 1006 150 63 3916 17 37 725 26 34 2809 1122 1110 g 0 0 0 1532 1354 318 164 28 23 3821 2971 42 3882 528 843 1054 t 0 0 0 616 777 39 19 8 33 61 100 3833 41 448 1074 821
MA0499.2_rc_shift3 (MYOD1_rc)				; oligos_7nt_mkv5_m5 versus MA0499.2_rc (MYOD1_rc); m=1/46; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.936957; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0
MA0745.2_rc_shift3 (SNAI2_rc)				; oligos_7nt_mkv5_m5 versus MA0745.2_rc (SNAI2_rc); m=2/46; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.914874; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0
MA0830.2_rc_shift3 (TCF4_rc)				; oligos_7nt_mkv5_m5 versus MA0830.2_rc (TCF4_rc); m=3/46; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.822021; ---ssggCAGGTGccg ; cor=; Ncor= a 0 0 0 6827.0 6430.0 6126.0 3555.0 242.0 27398.0 188.0 751.0 512.0 215.0 1737.0 7059.0 6225.0 c 0 0 0 7662.0 7964.0 4933.0 5281.0 28432.0 679.0 1197.0 1733.0 1295.0 321.0 18498.0 8618.0 7140.0 g 0 0 0 9843.0 8658.0 12872.0 18935.0 540.0 1016.0 27724.0 26765.0 635.0 28686.0 5062.0 6754.0 10052.0 t 0 0 0 5133.0 6413.0 5534.0 1694.0 251.0 372.0 356.0 216.0 27023.0 243.0 4168.0 7034.0 6048.0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)				; oligos_7nt_mkv5_m5 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=4/46; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.801333; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0
MA1621.1_rc_shift3 (Rbpjl_rc)				; oligos_7nt_mkv5_m5 versus MA1621.1_rc (Rbpjl_rc); m=5/46; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.799726; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0
MA1631.1_rc_shift3 (ASCL1(var.2)_rc)				; oligos_7nt_mkv5_m5 versus MA1631.1_rc (ASCL1(var.2)_rc); m=6/46; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.795366; ---gsrGCAGGTGchg ; cor=; Ncor= a 0 0 0 8032.0 7779.0 9017.0 2394.0 249.0 32756.0 151.0 815.0 618.0 289.0 3290.0 8805.0 7347.0 c 0 0 0 8356.0 8939.0 2966.0 2719.0 33411.0 492.0 607.0 3209.0 860.0 321.0 18576.0 8601.0 8371.0 g 0 0 0 11996.0 10555.0 17883.0 28844.0 445.0 740.0 33402.0 30169.0 563.0 33562.0 6654.0 7998.0 11805.0 t 0 0 0 5972.0 7083.0 4490.0 399.0 251.0 368.0 196.0 163.0 32315.0 184.0 5836.0 8952.0 6833.0
MA0521.1_shift5 (Tcf12)				; oligos_7nt_mkv5_m5 versus MA0521.1 (Tcf12); m=7/46; ncol2=11; w=11; offset=2; strand=D; shift=5; score=0.734293; -----rRCAGCTGswg ; cor=; Ncor= a 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 c 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 g 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 t 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0
MA0500.2_rc_shift4 (MYOG_rc)				; oligos_7nt_mkv5_m5 versus MA0500.2_rc (MYOG_rc); m=8/46; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.715576; ----sarCAGCTGyts ; cor=; Ncor= a 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 c 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 g 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 t 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0
MA1105.2_shift3 (GRHL2)				; oligos_7nt_mkv5_m5 versus MA1105.2 (GRHL2); m=9/46; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.714142; ---arAACAGGTTtk- ; cor=; Ncor= a 0 0 0 14483.0 17842.0 36467.0 37065.0 503.0 34024.0 2824.0 642.0 1878.0 1752.0 7061.0 8868.0 0 c 0 0 0 9741.0 6996.0 1147.0 712.0 40446.0 1543.0 581.0 987.0 2331.0 2000.0 9341.0 8528.0 0 g 0 0 0 9161.0 10776.0 2646.0 2841.0 609.0 485.0 37226.0 39624.0 748.0 1220.0 7961.0 10536.0 0 t 0 0 0 8493.0 6264.0 1618.0 1260.0 320.0 5826.0 1247.0 625.0 36921.0 36906.0 17515.0 13946.0 0
MA1641.1_shift4 (MYF5)				; oligos_7nt_mkv5_m5 versus MA1641.1 (MYF5); m=10/46; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.713454; ----gvaCAGCTGtbc ; cor=; Ncor= a 0 0 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 c 0 0 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 g 0 0 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 t 0 0 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0
MA1619.1_rc_shift4 (Ptf1a(var.2)_rc)				; oligos_7nt_mkv5_m5 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=11/46; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.712822; ----rmaCAGCTGtky ; cor=; Ncor= a 0 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 c 0 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 g 0 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 t 0 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0
MA0832.1_shift3 (Tcf21)				; oligos_7nt_mkv5_m5 versus MA0832.1 (Tcf21); m=12/46; ncol2=14; w=13; offset=0; strand=D; shift=3; score=0.712515; ---ryAACAGCTGTTr ; cor=; Ncor= a 0 0 0 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 c 0 0 0 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 g 0 0 0 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 t 0 0 0 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0
MA1642.1_shift3 (NEUROG2(var.2))				; oligos_7nt_mkv5_m5 versus MA1642.1 (NEUROG2(var.2)); m=13/46; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.712019; ---rrraCAGATGGyv ; cor=; Ncor= a 0 0 0 8690.0 9047.0 12089.0 16448.0 278.0 33720.0 400.0 32746.0 649.0 280.0 1523.0 6665.0 9464.0 c 0 0 0 7353.0 6843.0 6467.0 8154.0 33559.0 211.0 793.0 952.0 904.0 205.0 2966.0 10441.0 9034.0 g 0 0 0 10813.0 10123.0 11114.0 8039.0 317.0 301.0 30392.0 418.0 323.0 33422.0 24998.0 7581.0 8709.0 t 0 0 0 7535.0 8378.0 4721.0 1750.0 237.0 159.0 2806.0 275.0 32515.0 484.0 4904.0 9704.0 7184.0
MA1559.1_shift5 (SNAI3)				; oligos_7nt_mkv5_m5 versus MA1559.1 (SNAI3); m=14/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.70891; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0
MA0744.2_shift0 (SCRT2)				; oligos_7nt_mkv5_m5 versus MA0744.2 (SCRT2); m=15/46; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.704159; rrwkCAACAGGTggtw ; cor=; Ncor= a 18855.0 23310.0 29945.0 5353.0 1378.0 53425.0 62366.0 231.0 63880.0 7306.0 1862.0 2078.0 10481.0 13383.0 16058.0 17881.0 c 13345.0 12732.0 6319.0 7236.0 59161.0 5536.0 413.0 64856.0 294.0 728.0 972.0 3475.0 5661.0 11351.0 16085.0 13846.0 g 17680.0 17497.0 12473.0 35769.0 1339.0 2265.0 1878.0 319.0 252.0 56105.0 60636.0 1168.0 38133.0 25288.0 14716.0 12430.0 t 15730.0 12071.0 16873.0 17252.0 3732.0 4384.0 953.0 204.0 1184.0 1471.0 2140.0 58889.0 11335.0 15588.0 18751.0 21453.0
MA0743.2_shift0 (SCRT1)				; oligos_7nt_mkv5_m5 versus MA0743.2 (SCRT1); m=16/46; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.69717; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0
MA0103.3_rc_shift4 (ZEB1_rc)				; oligos_7nt_mkv5_m5 versus MA0103.3_rc (ZEB1_rc); m=17/46; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.67745; ----sssCAGGTGss- ; cor=; Ncor= a 0 0 0 0 3856.0 3153.0 3408.0 129.0 19269.0 30.0 122.0 1.0 662.0 4715.0 3692.0 0 c 0 0 0 0 5828.0 6601.0 5178.0 19381.0 355.0 649.0 97.0 223.0 158.0 5179.0 5228.0 0 g 0 0 0 0 6955.0 6117.0 9561.0 178.0 501.0 19257.0 19878.0 0.0 19195.0 5550.0 7998.0 0 t 0 0 0 0 3490.0 4258.0 1982.0 441.0 4.0 193.0 32.0 19905.0 114.0 4685.0 3211.0 0
MA1485.1_rc_shift3 (FERD3L_rc)				; oligos_7nt_mkv5_m5 versus MA1485.1_rc (FERD3L_rc); m=18/46; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.672555; ---GTrACAGCTGkyr ; cor=; Ncor= a 0 0 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 c 0 0 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 g 0 0 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 t 0 0 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0
MA0820.1_rc_shift5 (FIGLA_rc)				; oligos_7nt_mkv5_m5 versus MA0820.1_rc (FIGLA_rc); m=19/46; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.670114; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0
MA1558.1_shift5 (SNAI1)				; oligos_7nt_mkv5_m5 versus MA1558.1 (SNAI1); m=20/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.652833; -----drCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 5274.0 6993.0 446.0 19982.0 1766.0 72.0 38.0 706.0 1639.0 10088.0 0 c 0 0 0 0 0 3187.0 501.0 19982.0 297.0 517.0 5.0 0.0 0.0 10938.0 4592.0 0 g 0 0 0 0 0 6410.0 12989.0 275.0 91.0 19982.0 19982.0 42.0 19982.0 5306.0 9894.0 0 t 0 0 0 0 0 5112.0 3518.0 340.0 568.0 306.0 28.0 19982.0 311.0 9044.0 6356.0 0
MA1618.1_shift4 (Ptf1a)				; oligos_7nt_mkv5_m5 versus MA1618.1 (Ptf1a); m=21/46; ncol2=13; w=12; offset=1; strand=D; shift=4; score=0.641256; ----dmaCAGATGttk ; cor=; Ncor= a 0 0 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 c 0 0 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 g 0 0 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 t 0 0 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0
MA1648.1_rc_shift4 (TCF12(var.2)_rc)				; oligos_7nt_mkv5_m5 versus MA1648.1_rc (TCF12(var.2)_rc); m=22/46; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.638573; ----srGCAGGTGss- ; cor=; Ncor= a 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 0 c 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 0 g 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 0 t 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0 0
MA0522.3_rc_shift4 (TCF3_rc)				; oligos_7nt_mkv5_m5 versus MA0522.3_rc (TCF3_rc); m=23/46; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.630093; ----ssGCAGGTGbs- ; cor=; Ncor= a 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 0 c 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 0 g 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 0 t 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0 0
MA0665.1_rc_shift5 (MSC_rc)				; oligos_7nt_mkv5_m5 versus MA0665.1_rc (MSC_rc); m=24/46; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.621522; -----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 c 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 g 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 t 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0
MA0816.1_shift5 (Ascl2)				; oligos_7nt_mkv5_m5 versus MA0816.1 (Ascl2); m=25/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.620788; -----arCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 c 0 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 g 0 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 t 0 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0
MA1467.1_shift5 (ATOH1(var.2))				; oligos_7nt_mkv5_m5 versus MA1467.1 (ATOH1(var.2)); m=26/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.619173; -----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0
MA1472.1_shift5 (BHLHA15(var.2))				; oligos_7nt_mkv5_m5 versus MA1472.1 (BHLHA15(var.2)); m=27/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.613523; -----avCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 c 0 0 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 g 0 0 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 t 0 0 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0
MA1109.1_shift4 (NEUROD1)				; oligos_7nt_mkv5_m5 versus MA1109.1 (NEUROD1); m=28/46; ncol2=13; w=12; offset=1; strand=D; shift=4; score=0.612344; ----graCAGATGGyr ; cor=; Ncor= a 0 0 0 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 c 0 0 0 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 g 0 0 0 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 t 0 0 0 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0
MA1100.2_shift5 (ASCL1)				; oligos_7nt_mkv5_m5 versus MA1100.2 (ASCL1); m=29/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.610748; -----rrCAGCTGcy- ; cor=; Ncor= a 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 c 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 g 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 t 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0
MA0667.1_rc_shift5 (MYF6_rc)				; oligos_7nt_mkv5_m5 versus MA0667.1_rc (MYF6_rc); m=30/46; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.603412; -----RACAGyTGTT- ; cor=; Ncor= a 0 0 0 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 c 0 0 0 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 g 0 0 0 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 t 0 0 0 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0
MA0691.1_shift5 (TFAP4)				; oligos_7nt_mkv5_m5 versus MA0691.1 (TFAP4); m=31/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.59133; -----AwCAGCTGwT- ; cor=; Ncor= a 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 c 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 g 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 t 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0
MA1493.1_rc_shift5 (HES6_rc)				; oligos_7nt_mkv5_m5 versus MA1493.1_rc (HES6_rc); m=32/46; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.587887; -----rACACGTGCC- ; cor=; Ncor= a 0 0 0 0 0 209.0 439.0 0.0 439.0 0.0 16.0 11.0 15.0 13.0 43.0 0 c 0 0 0 0 0 0.0 0.0 439.0 29.0 439.0 9.0 9.0 19.0 439.0 439.0 0 g 0 0 0 0 0 152.0 21.0 0.0 7.0 12.0 439.0 0.0 439.0 35.0 39.0 0 t 0 0 0 0 0 79.0 33.0 0.0 0.0 10.0 2.0 439.0 17.0 16.0 12.0 0
MA0819.1_shift5 (CLOCK)				; oligos_7nt_mkv5_m5 versus MA0819.1 (CLOCK); m=33/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.568891; -----aACACGTGty- ; cor=; Ncor= a 0 0 0 0 0 226.0 429.0 11.0 429.0 16.0 40.0 3.0 0.0 1.0 89.0 0 c 0 0 0 0 0 35.0 85.0 429.0 5.0 429.0 0.0 5.0 3.0 152.0 128.0 0 g 0 0 0 0 0 93.0 89.0 2.0 15.0 0.0 429.0 5.0 429.0 110.0 39.0 0 t 0 0 0 0 0 75.0 13.0 2.0 0.0 28.0 0.0 429.0 9.0 429.0 174.0 0
MA0091.1_rc_shift5 (TAL1::TCF3_rc)				; oligos_7nt_mkv5_m5 versus MA0091.1_rc (TAL1::TCF3_rc); m=34/46; ncol2=12; w=11; offset=2; strand=R; shift=5; score=0.565527; -----AmCAKMTGkTc ; cor=; Ncor= a 0 0 0 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 c 0 0 0 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 g 0 0 0 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 t 0 0 0 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0
MA1635.1_shift5 (BHLHE22(var.2))				; oligos_7nt_mkv5_m5 versus MA1635.1 (BHLHE22(var.2)); m=35/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.564196; -----csCAGCTGsg- ; cor=; Ncor= a 0 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 c 0 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 g 0 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 t 0 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0
MA0048.2_rc_shift5 (NHLH1_rc)				; oligos_7nt_mkv5_m5 versus MA0048.2_rc (NHLH1_rc); m=36/46; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.559542; -----mGCAGCTGCg- ; cor=; Ncor= a 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 c 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 g 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 t 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0
MA1570.1_shift5 (TFAP4(var.2))				; oligos_7nt_mkv5_m5 versus MA1570.1 (TFAP4(var.2)); m=37/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.55176; -----ahCAyrTGkt- ; cor=; Ncor= a 0 0 0 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 c 0 0 0 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 g 0 0 0 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 t 0 0 0 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0
MA1638.1_shift5 (HAND2)				; oligos_7nt_mkv5_m5 versus MA1638.1 (HAND2); m=38/46; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.549996; -----amCAGATGby- ; cor=; Ncor= a 0 0 0 0 0 10136.0 8836.0 19.0 29222.0 12.0 30192.0 14.0 234.0 5217.0 6165.0 0 c 0 0 0 0 0 5564.0 11298.0 30062.0 410.0 42.0 30.0 2276.0 149.0 7690.0 10227.0 0 g 0 0 0 0 0 7463.0 6994.0 132.0 647.0 30144.0 38.0 31.0 29851.0 8878.0 6108.0 0 t 0 0 0 0 0 7120.0 3155.0 70.0 4.0 85.0 23.0 27962.0 49.0 8498.0 7783.0 0
MA0626.1_rc_shift5 (Npas2_rc)				; oligos_7nt_mkv5_m5 versus MA0626.1_rc (Npas2_rc); m=39/46; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.549051; -----kaCACGTGsh- ; cor=; Ncor= a 0 0 0 0 0 202.0 566.0 0.0 999.0 0.0 0.0 0.0 0.0 48.0 257.0 0 c 0 0 0 0 0 202.0 188.0 918.0 0.0 918.0 0.0 0.0 0.0 420.0 293.0 0 g 0 0 0 0 0 299.0 172.0 0.0 0.0 0.0 918.0 0.0 999.0 377.0 177.0 0 t 0 0 0 0 0 297.0 74.0 81.0 0.0 81.0 81.0 999.0 0.0 154.0 273.0 0
MA0807.1_shift8 (TBX5)				; oligos_7nt_mkv5_m5 versus MA0807.1 (TBX5); m=40/46; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.477155; --------AGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1804.0 235.0 0.0 45.0 27.0 162.0 126.0 1804.0 c 0 0 0 0 0 0 0 0 89.0 190.0 0.0 131.0 0.0 225.0 616.0 76.0 g 0 0 0 0 0 0 0 0 409.0 1804.0 1804.0 166.0 1804.0 201.0 1804.0 343.0 t 0 0 0 0 0 0 0 0 207.0 133.0 28.0 1804.0 0.0 1804.0 915.0 283.0
MA0806.1_shift8 (TBX4)				; oligos_7nt_mkv5_m5 versus MA0806.1 (TBX4); m=41/46; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.473155; --------AGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18646.0 3082.0 38.0 0.0 0.0 1551.0 1355.0 18646.0 c 0 0 0 0 0 0 0 0 437.0 2328.0 189.0 1644.0 0.0 2859.0 5396.0 588.0 g 0 0 0 0 0 0 0 0 2353.0 18646.0 18646.0 191.0 18646.0 304.0 18646.0 1733.0 t 0 0 0 0 0 0 0 0 1283.0 1162.0 33.0 18646.0 0.0 18646.0 8384.0 965.0
MA0622.1_rc_shift6 (Mlxip_rc)				; oligos_7nt_mkv5_m5 versus MA0622.1_rc (Mlxip_rc); m=42/46; ncol2=8; w=8; offset=3; strand=R; shift=6; score=0.456136; ------mCACGTGv-- ; cor=; Ncor= a 0 0 0 0 0 0 499.0 0.0 999.0 0.0 0.0 0.0 0.0 263.0 0 0 c 0 0 0 0 0 0 250.0 999.0 0.0 999.0 0.0 0.0 0.0 421.0 0 0 g 0 0 0 0 0 0 63.0 0.0 0.0 0.0 999.0 0.0 999.0 263.0 0 0 t 0 0 0 0 0 0 188.0 0.0 0.0 0.0 0.0 999.0 0.0 53.0 0 0
MA0803.1_shift8 (TBX15)				; oligos_7nt_mkv5_m5 versus MA0803.1 (TBX15); m=43/46; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.447502; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10502.0 458.0 19.0 61.0 0.0 140.0 44.0 10502.0 c 0 0 0 0 0 0 0 0 74.0 101.0 7.0 175.0 8.0 435.0 454.0 71.0 g 0 0 0 0 0 0 0 0 664.0 10502.0 10502.0 245.0 10502.0 324.0 10502.0 306.0 t 0 0 0 0 0 0 0 0 112.0 103.0 0.0 10502.0 0.0 10502.0 937.0 96.0
MA0480.1_rc_shift1 (Foxo1_rc)				; oligos_7nt_mkv5_m5 versus MA0480.1_rc (Foxo1_rc); m=44/46; ncol2=11; w=9; offset=-2; strand=R; shift=1; score=0.434108; -wGTAAACArsa---- ; cor=; Ncor= a 0 774.0 483.0 462.0 2203.0 2490.0 2490.0 0.0 2490.0 788.0 332.0 1267.0 0 0 0 0 c 0 71.0 0.0 0.0 287.0 0.0 0.0 2490.0 0.0 209.0 752.0 478.0 0 0 0 0 g 0 573.0 2007.0 157.0 0.0 0.0 0.0 0.0 0.0 1406.0 1279.0 277.0 0 0 0 0 t 0 1072.0 0.0 1871.0 0.0 0.0 0.0 0.0 0.0 87.0 127.0 468.0 0 0 0 0
MA0805.1_shift8 (TBX1)				; oligos_7nt_mkv5_m5 versus MA0805.1 (TBX1); m=45/46; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.433386; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11931.0 1560.0 0.0 28.0 0.0 142.0 141.0 11931.0 c 0 0 0 0 0 0 0 0 113.0 711.0 0.0 214.0 5.0 613.0 720.0 33.0 g 0 0 0 0 0 0 0 0 1007.0 11931.0 11931.0 141.0 11931.0 109.0 11931.0 18.0 t 0 0 0 0 0 0 0 0 564.0 669.0 0.0 11931.0 0.0 11931.0 1039.0 0.0
MA1647.1_rc_shift1 (PRDM4_rc)				; oligos_7nt_mkv5_m5 versus MA1647.1_rc (PRDM4_rc); m=46/46; ncol2=11; w=9; offset=-2; strand=R; shift=1; score=0.433173; -twGAAACAGhy---- ; cor=; Ncor= a 0 1799.0 2962.0 292.0 6811.0 6288.0 6889.0 39.0 5543.0 154.0 2123.0 1559.0 0 0 0 0 c 0 1344.0 726.0 129.0 111.0 393.0 82.0 6813.0 566.0 316.0 2079.0 2553.0 0 0 0 0 g 0 1532.0 1456.0 6353.0 138.0 405.0 137.0 110.0 286.0 6504.0 1012.0 1163.0 0 0 0 0 t 0 2580.0 2111.0 481.0 195.0 169.0 147.0 293.0 860.0 281.0 2041.0 1980.0 0 0 0 0

One-to-n matrix alignment; reference matrix: positions_7nt_m17_shift2 ; 61 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_7nt_m17_shift2 (positions_7nt_m17positions_7nt_m17)				; positions_7nt_m17 (positions_7nt_m17positions_7nt_m17); m=0 (reference); ncol1=13; shift=2; ncol=16; --gsaCACCTGTtcy- ; Alignment reference a 0 0 1477 1597 3726 26 6580 155 69 38 9 31 155 1433 1013 0 c 0 0 1666 2060 1300 6616 26 5187 6496 13 25 239 1644 2285 2553 0 g 0 0 1942 1956 1139 35 29 1217 52 11 6639 76 868 1579 1220 0 t 0 0 1600 1072 520 8 50 126 68 6623 12 6339 4018 1388 1899 0
MA0499.2_shift2 (MYOD1)				; positions_7nt_m17 versus MA0499.2 (MYOD1); m=1/60; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.930584; --cwgCACCTGTymy- ; cor=; Ncor= a 0 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 0 c 0 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 0 g 0 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 0 t 0 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0 0
MA0745.2_shift2 (SNAI2)				; positions_7nt_m17 versus MA0745.2 (SNAI2); m=2/60; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.925564; --aygCACCTGTmry- ; cor=; Ncor= a 0 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 0 c 0 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 0 g 0 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 0 t 0 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0 0
MA1620.1_shift2 (Ptf1a(var.3))				; positions_7nt_m17 versus MA1620.1 (Ptf1a(var.3)); m=3/60; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.890963; --rmaCACCTGtky-- ; cor=; Ncor= a 0 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 0 c 0 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 0 g 0 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 0 t 0 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0 0
MA1621.1_shift1 (Rbpjl)				; positions_7nt_m17 versus MA1621.1 (Rbpjl); m=4/60; ncol2=14; w=13; offset=-1; strand=D; shift=1; score=0.88724; -svmaCACCTGtsyc- ; cor=; Ncor= a 0 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 0 c 0 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 0 g 0 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 0 t 0 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0 0
MA0830.2_shift2 (TCF4)				; positions_7nt_m17 versus MA0830.2 (TCF4); m=5/60; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.812258; --cggCACCTGccss- ; cor=; Ncor= a 0 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 0 c 0 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 0 g 0 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 0 t 0 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0 0
MA1631.1_shift2 (ASCL1(var.2))				; positions_7nt_m17 versus MA1631.1 (ASCL1(var.2)); m=6/60; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.796465; --cdgCACCTGCysc- ; cor=; Ncor= a 0 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 0 c 0 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 0 g 0 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 0 t 0 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0 0
MA1641.1_rc_shift2 (MYF5_rc)				; positions_7nt_m17 versus MA1641.1_rc (MYF5_rc); m=7/60; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.787707; --gvaCAGCTGtbc-- ; cor=; Ncor= a 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 0 c 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 0 g 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 0 t 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0 0
MA1619.1_shift2 (Ptf1a(var.2))				; positions_7nt_m17 versus MA1619.1 (Ptf1a(var.2)); m=8/60; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.782819; --rmaCAGCTGtky-- ; cor=; Ncor= a 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 0 c 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 0 g 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 0 t 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0 0
MA0832.1_rc_shift1 (Tcf21_rc)				; positions_7nt_m17 versus MA0832.1_rc (Tcf21_rc); m=9/60; ncol2=14; w=13; offset=-1; strand=R; shift=1; score=0.765019; -ryAACAGCTGTTry- ; cor=; Ncor= a 0 60.0 19.0 171.0 171.0 0.0 171.0 1.0 2.0 0.0 0.0 0.0 3.0 46.0 17.0 0 c 0 32.0 80.0 0.0 20.0 171.0 0.0 1.0 171.0 0.0 0.0 0.0 23.0 22.0 70.0 0 g 0 49.0 23.0 23.0 4.0 0.0 0.0 171.0 0.0 1.0 171.0 10.0 1.0 76.0 29.0 0 t 0 30.0 50.0 5.0 0.0 0.0 0.0 0.0 0.0 171.0 0.0 171.0 171.0 28.0 55.0 0
MA1642.1_rc_shift2 (NEUROG2(var.2)_rc)				; positions_7nt_m17 versus MA1642.1_rc (NEUROG2(var.2)_rc); m=10/60; ncol2=13; w=13; offset=0; strand=R; shift=2; score=0.748544; --brCCATCTGtyyy- ; cor=; Ncor= a 0 0 7184.0 9704.0 4904.0 484.0 32515.0 275.0 2806.0 159.0 237.0 1750.0 4721.0 8378.0 7535.0 0 c 0 0 8709.0 7581.0 24998.0 33422.0 323.0 418.0 30392.0 301.0 317.0 8039.0 11114.0 10123.0 10813.0 0 g 0 0 9034.0 10441.0 2966.0 205.0 904.0 952.0 793.0 211.0 33559.0 8154.0 6467.0 6843.0 7353.0 0 t 0 0 9464.0 6665.0 1523.0 280.0 649.0 32746.0 400.0 33720.0 278.0 16448.0 12089.0 9047.0 8690.0 0
MA0521.1_rc_shift2 (Tcf12_rc)				; positions_7nt_m17 versus MA0521.1_rc (Tcf12_rc); m=11/60; ncol2=11; w=11; offset=0; strand=R; shift=2; score=0.730406; --cwsCAGCTGYy--- ; cor=; Ncor= a 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 0 c 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 0 g 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 0 t 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0 0
MA1485.1_shift1 (FERD3L)				; positions_7nt_m17 versus MA1485.1 (FERD3L); m=12/60; ncol2=14; w=13; offset=-1; strand=D; shift=1; score=0.721277; -GyrmCAGCTGTyAC- ; cor=; Ncor= a 0 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 0 c 0 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 0 g 0 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 0 t 0 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0 0
MA0103.3_shift3 (ZEB1)				; positions_7nt_m17 versus MA0103.3 (ZEB1); m=13/60; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.721254; ---ssCACCTGsss-- ; cor=; Ncor= a 0 0 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 0 c 0 0 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 0 g 0 0 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 0 t 0 0 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0 0
MA1105.2_rc_shift3 (GRHL2_rc)				; positions_7nt_m17 versus MA1105.2_rc (GRHL2_rc); m=14/60; ncol2=12; w=12; offset=1; strand=R; shift=3; score=0.721099; ---maAACCTGTTyt- ; cor=; Ncor= a 0 0 0 13946.0 17515.0 36906.0 36921.0 625.0 1247.0 5826.0 320.0 1260.0 1618.0 6264.0 8493.0 0 c 0 0 0 10536.0 7961.0 1220.0 748.0 39624.0 37226.0 485.0 609.0 2841.0 2646.0 10776.0 9161.0 0 g 0 0 0 8528.0 9341.0 2000.0 2331.0 987.0 581.0 1543.0 40446.0 712.0 1147.0 6996.0 9741.0 0 t 0 0 0 8868.0 7061.0 1752.0 1878.0 642.0 2824.0 34024.0 503.0 37065.0 36467.0 17842.0 14483.0 0
MA0500.2_shift2 (MYOG)				; positions_7nt_m17 versus MA0500.2 (MYOG); m=15/60; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.716002; --sarCAGCTGyts-- ; cor=; Ncor= a 0 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 0 c 0 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 0 g 0 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 0 t 0 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0 0
MA0820.1_shift3 (FIGLA)				; positions_7nt_m17 versus MA0820.1 (FIGLA); m=16/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.714327; ---wmCACCTGkw--- ; cor=; Ncor= a 0 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 0 c 0 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 0 g 0 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 0 t 0 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0 0
MA0744.2_rc_shift2 (SCRT2_rc)				; positions_7nt_m17 versus MA0744.2_rc (SCRT2_rc); m=17/60; ncol2=16; w=13; offset=0; strand=R; shift=2; score=0.708362; --waccACCTGTTGmw ; cor=; Ncor= a 0 0 21453.0 18751.0 15588.0 11335.0 58889.0 2140.0 1471.0 1184.0 204.0 953.0 4384.0 3732.0 17252.0 16873.0 c 0 0 12430.0 14716.0 25288.0 38133.0 1168.0 60636.0 56105.0 252.0 319.0 1878.0 2265.0 1339.0 35769.0 12473.0 g 0 0 13846.0 16085.0 11351.0 5661.0 3475.0 972.0 728.0 294.0 64856.0 413.0 5536.0 59161.0 7236.0 6319.0 t 0 0 17881.0 16058.0 13383.0 10481.0 2078.0 1862.0 7306.0 63880.0 231.0 62366.0 53425.0 1378.0 5353.0 29945.0
MA0743.2_rc_shift2 (SCRT1_rc)				; positions_7nt_m17 versus MA0743.2_rc (SCRT1_rc); m=18/60; ncol2=16; w=13; offset=0; strand=R; shift=2; score=0.707514; --wacCACCTGTTGmw ; cor=; Ncor= a 0 0 19839.0 18454.0 13726.0 7910.0 57969.0 1579.0 1305.0 1058.0 215.0 1002.0 4017.0 2621.0 31975.0 24326.0 c 0 0 11049.0 13470.0 26973.0 41190.0 259.0 56500.0 51330.0 159.0 224.0 1566.0 1835.0 1297.0 16396.0 10154.0 g 0 0 12837.0 14903.0 8788.0 3296.0 1098.0 466.0 557.0 234.0 59557.0 370.0 8751.0 54835.0 7425.0 8693.0 t 0 0 16484.0 13382.0 10722.0 7813.0 883.0 1664.0 7017.0 58758.0 213.0 57271.0 45606.0 1456.0 4413.0 17036.0
MA0783.1_rc_shift2 (PKNOX2_rc)				; positions_7nt_m17 versus MA0783.1_rc (PKNOX2_rc); m=19/60; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.707455; --TGACAsCTGTCA-- ; cor=; Ncor= a 0 0 9.0 3.0 1167.0 0.0 1204.0 0.0 118.0 4.0 9.0 6.0 0.0 1192.0 0 0 c 0 0 21.0 6.0 5.0 1370.0 0.0 702.0 1298.0 1.0 0.0 13.0 1389.0 9.0 0 0 g 0 0 1.0 1265.0 29.0 1.0 4.0 304.0 0.0 0.0 1250.0 3.0 6.0 0.0 0 0 t 0 0 1190.0 11.0 10.0 3.0 0.0 39.0 7.0 1169.0 0.0 1124.0 1.0 37.0 0 0
MA1618.1_shift2 (Ptf1a)				; positions_7nt_m17 versus MA1618.1 (Ptf1a); m=20/60; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.706897; --dmaCAGATGttkh- ; cor=; Ncor= a 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 3754.0 0 c 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 3689.0 0 g 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 3376.0 0 t 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0 3622.0 0
MA1559.1_rc_shift3 (SNAI3_rc)				; positions_7nt_m17 versus MA1559.1_rc (SNAI3_rc); m=21/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.703066; ---trCACCTGyt--- ; cor=; Ncor= a 0 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 0 c 0 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 0 g 0 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 0 t 0 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0 0
MA1558.1_rc_shift3 (SNAI1_rc)				; positions_7nt_m17 versus MA1558.1_rc (SNAI1_rc); m=22/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.676623; ---yrCACCTGyh--- ; cor=; Ncor= a 0 0 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 0 c 0 0 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 0 g 0 0 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 0 t 0 0 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0 0
MA0797.1_rc_shift2 (TGIF2_rc)				; positions_7nt_m17 versus MA0797.1_rc (TGIF2_rc); m=23/60; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.673555; --TGACAsCTGTCA-- ; cor=; Ncor= a 0 0 420.0 113.0 11801.0 83.0 11801.0 91.0 2690.0 41.0 156.0 155.0 52.0 11801.0 0 0 c 0 0 395.0 136.0 123.0 11801.0 57.0 4341.0 11801.0 270.0 51.0 396.0 11801.0 153.0 0 0 g 0 0 172.0 11801.0 621.0 77.0 410.0 7459.0 262.0 25.0 11801.0 34.0 48.0 421.0 0 0 t 0 0 11801.0 70.0 601.0 150.0 71.0 1501.0 324.0 11801.0 127.0 11801.0 97.0 477.0 0 0
MA0665.1_shift3 (MSC)				; positions_7nt_m17 versus MA0665.1 (MSC); m=24/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.667286; ---AACAGCTGTT--- ; cor=; Ncor= a 0 0 0 69.0 69.0 0.0 69.0 0.0 0.0 0.0 0.0 3.0 0.0 0 0 0 c 0 0 0 0.0 12.0 69.0 0.0 12.0 69.0 0.0 0.0 10.0 9.0 0 0 0 g 0 0 0 18.0 3.0 3.0 0.0 69.0 3.0 0.0 69.0 4.0 4.0 0 0 0 t 0 0 0 7.0 0.0 1.0 0.0 0.0 0.0 69.0 4.0 69.0 69.0 0 0 0
MA1648.1_shift3 (TCF12(var.2))				; positions_7nt_m17 versus MA1648.1 (TCF12(var.2)); m=25/60; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.666245; ---ssCACCTGCys-- ; cor=; Ncor= a 0 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 0 c 0 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 0 g 0 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 0 t 0 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0 0
MA0522.3_shift3 (TCF3)				; positions_7nt_m17 versus MA0522.3 (TCF3); m=26/60; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.660989; ---svCACCTGCss-- ; cor=; Ncor= a 0 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 0 c 0 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 0 g 0 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 0 t 0 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0 0
MA0667.1_shift3 (MYF6)				; positions_7nt_m17 versus MA0667.1 (MYF6); m=27/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.660464; ---AACArCTGTY--- ; cor=; Ncor= a 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 0 0 c 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 0 0 g 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 0 0 t 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0 0 0
MA1571.1_shift2 (TGIF2LX)				; positions_7nt_m17 versus MA1571.1 (TGIF2LX); m=28/60; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.660159; --TGACAgcTGTCA-- ; cor=; Ncor= a 0 0 237.0 52.0 2539.0 32.0 2539.0 37.0 380.0 37.0 64.0 428.0 45.0 2539.0 0 0 c 0 0 355.0 187.0 64.0 2539.0 18.0 575.0 1568.0 318.0 23.0 127.0 2539.0 132.0 0 0 g 0 0 145.0 2539.0 132.0 29.0 316.0 1566.0 554.0 23.0 2539.0 72.0 172.0 361.0 0 0 t 0 0 2539.0 47.0 428.0 59.0 40.0 362.0 38.0 2539.0 22.0 2539.0 66.0 232.0 0 0
MA0796.1_rc_shift2 (TGIF1_rc)				; positions_7nt_m17 versus MA0796.1_rc (TGIF1_rc); m=29/60; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.658091; --TGACAGCTGTCA-- ; cor=; Ncor= a 0 0 33.0 17.0 12656.0 9.0 12775.0 12.0 963.0 4.0 7.0 0.0 4.0 13221.0 0 0 c 0 0 32.0 13.0 3.0 13261.0 8.0 2520.0 12673.0 22.0 5.0 20.0 13499.0 1.0 0 0 g 0 0 17.0 13485.0 24.0 13.0 62.0 10562.0 20.0 5.0 13304.0 3.0 8.0 19.0 0 0 t 0 0 9034.0 36.0 45.0 11.0 1.0 452.0 14.0 8861.0 1.0 8828.0 9.0 39.0 0 0
MA1467.1_rc_shift3 (ATOH1(var.2)_rc)				; positions_7nt_m17 versus MA1467.1_rc (ATOH1(var.2)_rc); m=30/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.654077; ---RACAGCTGTT--- ; cor=; Ncor= a 0 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 c 0 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 g 0 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 t 0 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0
MA1572.1_shift2 (TGIF2LY)				; positions_7nt_m17 versus MA1572.1 (TGIF2LY); m=31/60; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.651865; --TGACAgcTGTCA-- ; cor=; Ncor= a 0 0 736.0 162.0 5209.0 123.0 5209.0 130.0 1033.0 140.0 175.0 1084.0 135.0 5209.0 0 0 c 0 0 836.0 270.0 163.0 5209.0 37.0 1267.0 2850.0 848.0 61.0 371.0 5209.0 362.0 0 0 g 0 0 415.0 5209.0 349.0 66.0 833.0 2794.0 1188.0 73.0 5209.0 145.0 259.0 807.0 0 0 t 0 0 5209.0 104.0 1197.0 144.0 110.0 1018.0 138.0 5209.0 121.0 5209.0 172.0 679.0 0 0
MA1109.1_rc_shift1 (NEUROD1_rc)				; positions_7nt_m17 versus MA1109.1_rc (NEUROD1_rc); m=32/60; ncol2=13; w=12; offset=-1; strand=R; shift=1; score=0.646794; -syrCCATCTGtyc-- ; cor=; Ncor= a 0 525.0 451.0 580.0 168.0 31.0 2157.0 21.0 90.0 18.0 12.0 47.0 298.0 566.0 0 0 c 0 628.0 599.0 418.0 1962.0 2231.0 19.0 77.0 2152.0 16.0 13.0 494.0 906.0 726.0 0 0 g 0 591.0 540.0 911.0 93.0 7.0 51.0 150.0 24.0 7.0 2240.0 452.0 323.0 429.0 0 0 t 0 538.0 692.0 373.0 59.0 13.0 55.0 2034.0 16.0 2241.0 17.0 1289.0 755.0 561.0 0 0
MA1472.1_rc_shift3 (BHLHA15(var.2)_rc)				; positions_7nt_m17 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=33/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.640998; ---rrCAGCTGbt--- ; cor=; Ncor= a 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 c 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 g 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 t 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0
MA0691.1_rc_shift3 (TFAP4_rc)				; positions_7nt_m17 versus MA0691.1_rc (TFAP4_rc); m=34/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.616234; ---AwCAGCTGwT--- ; cor=; Ncor= a 0 0 0 3423.0 1613.0 0.0 3423.0 6.0 14.0 0.0 0.0 1264.0 228.0 0 0 0 c 0 0 0 433.0 333.0 3423.0 0.0 49.0 3423.0 0.0 0.0 62.0 337.0 0 0 0 g 0 0 0 682.0 114.0 1.0 1.0 3423.0 85.0 2.0 3423.0 546.0 500.0 0 0 0 t 0 0 0 299.0 1810.0 0.0 1.0 21.0 2.0 3423.0 0.0 2159.0 3423.0 0 0 0
MA0819.1_rc_shift3 (CLOCK_rc)				; positions_7nt_m17 versus MA0819.1_rc (CLOCK_rc); m=35/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.606067; ---raCACGTGTt--- ; cor=; Ncor= a 0 0 0 174.0 429.0 9.0 429.0 0.0 28.0 0.0 2.0 13.0 75.0 0 0 0 c 0 0 0 39.0 110.0 429.0 5.0 429.0 0.0 15.0 2.0 89.0 93.0 0 0 0 g 0 0 0 128.0 152.0 3.0 5.0 0.0 429.0 5.0 429.0 85.0 35.0 0 0 0 t 0 0 0 89.0 1.0 0.0 3.0 40.0 16.0 429.0 11.0 429.0 226.0 0 0 0
MA1100.2_rc_shift3 (ASCL1_rc)				; positions_7nt_m17 versus MA1100.2_rc (ASCL1_rc); m=36/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.604661; ---rgCAGCTGyy--- ; cor=; Ncor= a 0 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 0 c 0 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 0 g 0 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 0 t 0 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0 0
MA0816.1_shift3 (Ascl2)				; positions_7nt_m17 versus MA0816.1 (Ascl2); m=37/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.597771; ---arCAGCTGyy--- ; cor=; Ncor= a 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 0 c 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 0 g 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 0 t 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0 0
MA1570.1_rc_shift3 (TFAP4(var.2)_rc)				; positions_7nt_m17 versus MA1570.1_rc (TFAP4(var.2)_rc); m=38/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.592678; ---amCAyrTGdt--- ; cor=; Ncor= a 0 0 0 479.0 206.0 0.0 479.0 0.0 479.0 0.0 0.0 129.0 39.0 0 0 0 c 0 0 0 110.0 156.0 479.0 0.0 287.0 161.0 14.0 0.0 0.0 197.0 0 0 0 g 0 0 0 210.0 14.0 3.0 0.0 149.0 220.0 0.0 479.0 144.0 130.0 0 0 0 t 0 0 0 60.0 103.0 0.0 0.0 479.0 0.0 479.0 0.0 217.0 479.0 0 0 0
MA0091.1_shift1 (TAL1::TCF3)				; positions_7nt_m17 versus MA0091.1 (TAL1::TCF3); m=39/60; ncol2=12; w=11; offset=-1; strand=D; shift=1; score=0.591049; -mgAmCAKMTGkT--- ; cor=; Ncor= a 0 13.0 9.0 39.0 20.0 0.0 44.0 0.0 12.0 0.0 0.0 0.0 4.0 0 0 0 c 0 14.0 10.0 0.0 24.0 43.0 0.0 1.0 32.0 0.0 0.0 3.0 4.0 0 0 0 g 0 8.0 20.0 3.0 0.0 1.0 0.0 11.0 0.0 0.0 43.0 20.0 2.0 0 0 0 t 0 9.0 5.0 2.0 0.0 0.0 0.0 32.0 0.0 44.0 1.0 21.0 34.0 0 0 0
MA1635.1_rc_shift3 (BHLHE22(var.2)_rc)				; positions_7nt_m17 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=40/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.579412; ---csCAGCTGsg--- ; cor=; Ncor= a 0 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 0 c 0 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 0 g 0 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 0 t 0 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0 0
MA1638.1_rc_shift3 (HAND2_rc)				; positions_7nt_m17 versus MA1638.1_rc (HAND2_rc); m=41/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.568048; ---rvCATCTGkt--- ; cor=; Ncor= a 0 0 0 7783.0 8498.0 49.0 27962.0 23.0 85.0 4.0 70.0 3155.0 7120.0 0 0 0 c 0 0 0 6108.0 8878.0 29851.0 31.0 38.0 30144.0 647.0 132.0 6994.0 7463.0 0 0 0 g 0 0 0 10227.0 7690.0 149.0 2276.0 30.0 42.0 410.0 30062.0 11298.0 5564.0 0 0 0 t 0 0 0 6165.0 5217.0 234.0 14.0 30192.0 12.0 29222.0 19.0 8836.0 10136.0 0 0 0
MA0100.3_shift3 (MYB)				; positions_7nt_m17 versus MA0100.3 (MYB); m=42/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.559858; ---mbCAACTGhm--- ; cor=; Ncor= a 0 0 0 425.0 292.0 0.0 1478.0 1519.0 0.0 1.0 8.0 401.0 422.0 0 0 0 c 0 0 0 422.0 428.0 1513.0 3.0 2.0 1527.0 60.0 3.0 482.0 528.0 0 0 0 g 0 0 0 300.0 397.0 5.0 39.0 0.0 0.0 68.0 1516.0 147.0 225.0 0 0 0 t 0 0 0 380.0 410.0 9.0 7.0 6.0 0.0 1398.0 0.0 497.0 352.0 0 0 0
MA0626.1_shift3 (Npas2)				; positions_7nt_m17 versus MA0626.1 (Npas2); m=43/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.557124; ---dsCACGTGtm--- ; cor=; Ncor= a 0 0 0 273.0 154.0 0.0 999.0 81.0 81.0 0.0 81.0 74.0 297.0 0 0 0 c 0 0 0 177.0 377.0 999.0 0.0 918.0 0.0 0.0 0.0 172.0 299.0 0 0 0 g 0 0 0 293.0 420.0 0.0 0.0 0.0 918.0 0.0 918.0 188.0 202.0 0 0 0 t 0 0 0 257.0 48.0 0.0 0.0 0.0 0.0 999.0 0.0 566.0 202.0 0 0 0
MA0807.1_rc_shift2 (TBX5_rc)				; positions_7nt_m17 versus MA0807.1_rc (TBX5_rc); m=44/60; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.549056; --TmACACCT------ ; cor=; Ncor= a 0 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 0 c 0 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 0 g 0 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 0 t 0 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0 0
MA1493.1_shift3 (HES6)				; positions_7nt_m17 versus MA1493.1 (HES6); m=45/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.541607; ---GGCACGTGTy--- ; cor=; Ncor= a 0 0 0 12.0 16.0 17.0 439.0 2.0 10.0 0.0 0.0 33.0 79.0 0 0 0 c 0 0 0 39.0 35.0 439.0 0.0 439.0 12.0 7.0 0.0 21.0 152.0 0 0 0 g 0 0 0 439.0 439.0 19.0 9.0 9.0 439.0 29.0 439.0 0.0 0.0 0 0 0 t 0 0 0 43.0 13.0 15.0 11.0 16.0 0.0 439.0 0.0 439.0 209.0 0 0 0
MA0048.2_shift3 (NHLH1)				; positions_7nt_m17 versus MA0048.2 (NHLH1); m=46/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.540952; ---cGCAGCTGCk--- ; cor=; Ncor= a 0 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 c 0 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 g 0 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 t 0 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0
MA0806.1_rc_shift2 (TBX4_rc)				; positions_7nt_m17 versus MA0806.1_rc (TBX4_rc); m=47/60; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.540852; --TcACACCT------ ; cor=; Ncor= a 0 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 0 0 0 0 c 0 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 0 0 0 0 g 0 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 0 0 0 0 t 0 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0 0 0 0 0
MA1108.2_shift3 (MXI1)				; positions_7nt_m17 versus MA1108.2 (MXI1); m=48/60; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.540413; ---rvCACATGkc--- ; cor=; Ncor= a 0 0 0 5786.0 6184.0 109.0 21870.0 10.0 20506.0 0.0 527.0 2833.0 4945.0 0 0 0 c 0 0 0 4724.0 5841.0 21382.0 1.0 21552.0 0.0 507.0 114.0 5329.0 6343.0 0 0 0 g 0 0 0 6326.0 6078.0 97.0 170.0 18.0 1542.0 0.0 21232.0 7228.0 5394.0 0 0 0 t 0 0 0 5212.0 3945.0 460.0 7.0 468.0 0.0 21541.0 175.0 6658.0 5366.0 0 0 0
MA0058.3_rc_shift3 (MAX_rc)				; positions_7nt_m17 versus MA0058.3_rc (MAX_rc); m=49/60; ncol2=10; w=10; offset=1; strand=R; shift=3; score= 0.5386; ---rgCACGTGkt--- ; cor=; Ncor= a 0 0 0 2543.0 1446.0 36.0 6876.0 19.0 229.0 38.0 0.0 637.0 719.0 0 0 0 c 0 0 0 986.0 1638.0 6876.0 20.0 6876.0 7.0 87.0 0.0 1514.0 1295.0 0 0 0 g 0 0 0 2225.0 2450.0 27.0 159.0 39.0 6876.0 0.0 6876.0 2809.0 1556.0 0 0 0 t 0 0 0 1122.0 1341.0 0.0 69.0 329.0 0.0 6876.0 39.0 1915.0 3307.0 0 0 0
MA0803.1_rc_shift2 (TBX15_rc)				; positions_7nt_m17 versus MA0803.1_rc (TBX15_rc); m=50/60; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.526425; --TCACACCT------ ; cor=; Ncor= a 0 0 96.0 937.0 10502.0 0.0 10502.0 0.0 103.0 112.0 0 0 0 0 0 0 c 0 0 306.0 10502.0 324.0 10502.0 245.0 10502.0 10502.0 664.0 0 0 0 0 0 0 g 0 0 71.0 454.0 435.0 8.0 175.0 7.0 101.0 74.0 0 0 0 0 0 0 t 0 0 10502.0 44.0 140.0 0.0 61.0 19.0 458.0 10502.0 0 0 0 0 0 0
MA0805.1_rc_shift2 (TBX1_rc)				; positions_7nt_m17 versus MA0805.1_rc (TBX1_rc); m=51/60; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.513197; --TCACACCT------ ; cor=; Ncor= a 0 0 0.0 1039.0 11931.0 0.0 11931.0 0.0 669.0 564.0 0 0 0 0 0 0 c 0 0 18.0 11931.0 109.0 11931.0 141.0 11931.0 11931.0 1007.0 0 0 0 0 0 0 g 0 0 33.0 720.0 613.0 5.0 214.0 0.0 711.0 113.0 0 0 0 0 0 0 t 0 0 11931.0 141.0 142.0 0.0 28.0 0.0 1560.0 11931.0 0 0 0 0 0 0
MA0801.1_rc_shift2 (MGA_rc)				; positions_7nt_m17 versus MA0801.1_rc (MGA_rc); m=52/60; ncol2=8; w=8; offset=0; strand=R; shift=2; score= 0.5018; --TCACACCT------ ; cor=; Ncor= a 0 0 274.0 6465.0 30489.0 11.0 30489.0 104.0 1929.0 4160.0 0 0 0 0 0 0 c 0 0 920.0 30489.0 381.0 30489.0 96.0 30489.0 30489.0 8873.0 0 0 0 0 0 0 g 0 0 110.0 1753.0 3089.0 1.0 3534.0 509.0 3737.0 1151.0 0 0 0 0 0 0 t 0 0 30489.0 689.0 1042.0 14.0 12.0 16.0 4310.0 30489.0 0 0 0 0 0 0
MA1567.1_rc_shift1 (TBX6_rc)				; positions_7nt_m17 versus MA1567.1_rc (TBX6_rc); m=53/60; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.48562; -tTmACACcty----- ; cor=; Ncor= a 0 2330.0 713.0 5964.0 11087.0 12.0 11087.0 0.0 1058.0 2157.0 2456.0 0 0 0 0 0 c 0 2141.0 2251.0 11087.0 320.0 11087.0 0.0 11087.0 11087.0 3347.0 4003.0 0 0 0 0 0 g 0 2066.0 652.0 4876.0 3053.0 0.0 1002.0 63.0 2913.0 1173.0 1630.0 0 0 0 0 0 t 0 4550.0 11087.0 1430.0 552.0 14.0 44.0 58.0 1882.0 11087.0 2998.0 0 0 0 0 0
MA1566.1_rc_shift1 (TBX3_rc)				; positions_7nt_m17 versus MA1566.1_rc (TBX3_rc); m=54/60; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.476935; -ttsACACcty----- ; cor=; Ncor= a 0 578.0 484.0 1112.0 2544.0 0.0 2544.0 0.0 302.0 760.0 497.0 0 0 0 0 0 c 0 620.0 947.0 2544.0 155.0 2544.0 0.0 2544.0 2544.0 1207.0 1003.0 0 0 0 0 0 g 0 586.0 410.0 1471.0 634.0 0.0 735.0 45.0 862.0 481.0 399.0 0 0 0 0 0 t 0 760.0 2544.0 170.0 115.0 0.0 16.0 6.0 427.0 2544.0 644.0 0 0 0 0 0
MA0690.1_rc_shift1 (TBX21_rc)				; positions_7nt_m17 versus MA0690.1_rc (TBX21_rc); m=55/60; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.452006; -TTCACACCTt----- ; cor=; Ncor= a 0 1287.0 0.0 364.0 4395.0 2.0 4395.0 33.0 398.0 146.0 872.0 0 0 0 0 0 c 0 317.0 38.0 4395.0 34.0 4395.0 16.0 4395.0 4395.0 359.0 937.0 0 0 0 0 0 g 0 441.0 0.0 126.0 331.0 0.0 180.0 17.0 239.0 30.0 263.0 0 0 0 0 0 t 0 4395.0 4395.0 80.0 185.0 1.0 6.0 2.0 612.0 4395.0 2322.0 0 0 0 0 0
MA0802.1_rc_shift0 (TBR1_rc)				; positions_7nt_m17 versus MA0802.1_rc (TBR1_rc); m=56/60; ncol2=10; w=8; offset=-2; strand=R; shift=0; score=0.446913; tTTCACACCT------ ; cor=; Ncor= a 5846.0 4576.0 205.0 7001.0 34509.0 4.0 34509.0 213.0 4480.0 1433.0 0 0 0 0 0 0 c 4537.0 1488.0 584.0 34509.0 157.0 34509.0 88.0 34509.0 34509.0 3329.0 0 0 0 0 0 0 g 5619.0 2575.0 90.0 2551.0 4742.0 6.0 1759.0 254.0 3255.0 359.0 0 0 0 0 0 0 t 18507.0 25869.0 34509.0 1175.0 2386.0 0.0 39.0 70.0 6880.0 34509.0 0 0 0 0 0 0
MA0774.1_rc_shift7 (MEIS2_rc)				; positions_7nt_m17 versus MA0774.1_rc (MEIS2_rc); m=57/60; ncol2=8; w=8; offset=5; strand=R; shift=7; score=0.443903; -------sCTGTCAa- ; cor=; Ncor= a 0 0 0 0 0 0 0 88.0 67.0 0.0 5.0 62.0 0.0 1351.0 1351.0 0 c 0 0 0 0 0 0 0 650.0 1351.0 4.0 0.0 25.0 1351.0 40.0 314.0 0 g 0 0 0 0 0 0 0 701.0 98.0 7.0 1351.0 3.0 0.0 3.0 264.0 0 t 0 0 0 0 0 0 0 157.0 83.0 1351.0 9.0 1351.0 0.0 31.0 408.0 0
MA0622.1_shift4 (Mlxip)				; positions_7nt_m17 versus MA0622.1 (Mlxip); m=58/60; ncol2=8; w=8; offset=2; strand=D; shift=4; score=0.441991; ----bCACGTGk---- ; cor=; Ncor= a 0 0 0 0 53.0 0.0 999.0 0.0 0.0 0.0 0.0 188.0 0 0 0 0 c 0 0 0 0 263.0 999.0 0.0 999.0 0.0 0.0 0.0 63.0 0 0 0 0 g 0 0 0 0 421.0 0.0 0.0 0.0 999.0 0.0 999.0 250.0 0 0 0 0 t 0 0 0 0 263.0 0.0 0.0 0.0 0.0 999.0 0.0 499.0 0 0 0 0
MA0688.1_rc_shift0 (TBX2_rc)				; positions_7nt_m17 versus MA0688.1_rc (TBX2_rc); m=59/60; ncol2=11; w=9; offset=-2; strand=R; shift=0; score=0.439671; ttTcACACCTw----- ; cor=; Ncor= a 667.0 656.0 120.0 1409.0 3181.0 12.0 3181.0 14.0 353.0 442.0 804.0 0 0 0 0 0 c 590.0 527.0 125.0 3181.0 27.0 3181.0 21.0 3181.0 3181.0 716.0 717.0 0 0 0 0 0 g 446.0 491.0 26.0 1289.0 392.0 0.0 329.0 36.0 519.0 59.0 402.0 0 0 0 0 0 t 1477.0 2525.0 3181.0 310.0 307.0 26.0 0.0 9.0 602.0 3181.0 1258.0 0 0 0 0 0
MA0689.1_rc_shift0 (TBX20_rc)				; positions_7nt_m17 versus MA0689.1_rc (TBX20_rc); m=60/60; ncol2=11; w=9; offset=-2; strand=R; shift=0; score=0.420723; yTTCACACCTw----- ; cor=; Ncor= a 59.0 170.0 10.0 82.0 572.0 4.0 572.0 40.0 26.0 24.0 250.0 0 0 0 0 0 c 300.0 53.0 6.0 572.0 11.0 572.0 10.0 572.0 572.0 54.0 121.0 0 0 0 0 0 g 60.0 16.0 1.0 10.0 1.0 1.0 0.0 0.0 34.0 23.0 4.0 0 0 0 0 0 t 154.0 572.0 572.0 48.0 8.0 0.0 0.0 0.0 50.0 572.0 197.0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv5_m6_shift3 ; 37 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv5_m6_shift3 (oligos_7nt_mkv5_m6oligos_7nt_mkv5_m6)				; oligos_7nt_mkv5_m6 (oligos_7nt_mkv5_m6oligos_7nt_mkv5_m6); m=0 (reference); ncol1=13; shift=3; ncol=18; ---ssgCACCTGCTsy-- ; Alignment reference a 0 0 0 845 1045 671 79 4358 36 50 25 24 19 24 587 653 0 0 c 0 0 0 1450 1331 910 4282 33 4208 4314 59 60 4135 140 1555 1804 0 0 g 0 0 0 1209 1215 2586 101 81 178 103 79 4385 62 105 1661 874 0 0 t 0 0 0 988 901 325 30 20 70 25 4329 23 276 4223 689 1161 0 0
MA1631.1_shift3 (ASCL1(var.2))				; oligos_7nt_mkv5_m6 versus MA1631.1 (ASCL1(var.2)); m=1/36; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.926622; ---cdgCACCTGCysc-- ; cor=; Ncor= a 0 0 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 0 0 c 0 0 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 0 0 g 0 0 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 0 0 t 0 0 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0 0 0
MA0830.2_shift3 (TCF4)				; oligos_7nt_mkv5_m6 versus MA0830.2 (TCF4); m=2/36; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.913389; ---cggCACCTGccss-- ; cor=; Ncor= a 0 0 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 0 0 c 0 0 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 0 0 g 0 0 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 0 0 t 0 0 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0 0 0
MA0745.2_shift3 (SNAI2)				; oligos_7nt_mkv5_m6 versus MA0745.2 (SNAI2); m=3/36; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.799834; ---aygCACCTGTmry-- ; cor=; Ncor= a 0 0 0 14658.0 7668.0 10322.0 408.0 44963.0 112.0 246.0 78.0 179.0 814.0 12017.0 13586.0 6215.0 0 0 c 0 0 0 10031.0 12314.0 6393.0 44463.0 202.0 45144.0 44739.0 313.0 254.0 6467.0 18771.0 11016.0 13476.0 0 0 g 0 0 0 11169.0 9490.0 26742.0 323.0 424.0 326.0 487.0 196.0 45257.0 1263.0 6281.0 12297.0 8219.0 0 0 t 0 0 0 9958.0 16344.0 2359.0 622.0 227.0 234.0 344.0 45229.0 126.0 37272.0 8747.0 8917.0 17906.0 0 0
MA1648.1_shift4 (TCF12(var.2))				; oligos_7nt_mkv5_m6 versus MA1648.1 (TCF12(var.2)); m=4/36; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.786964; ----ssCACCTGCys--- ; cor=; Ncor= a 0 0 0 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 0 0 c 0 0 0 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 0 0 g 0 0 0 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 0 0 t 0 0 0 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0 0 0
MA0522.3_shift4 (TCF3)				; oligos_7nt_mkv5_m6 versus MA0522.3 (TCF3); m=5/36; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.782027; ----svCACCTGCss--- ; cor=; Ncor= a 0 0 0 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 0 0 c 0 0 0 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 0 0 g 0 0 0 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 0 0 t 0 0 0 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0 0 0
MA0499.2_shift3 (MYOD1)				; oligos_7nt_mkv5_m6 versus MA0499.2 (MYOD1); m=6/36; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.778538; ---cwgCACCTGTymy-- ; cor=; Ncor= a 0 0 0 7175.0 9462.0 4549.0 349.0 32281.0 463.0 534.0 241.0 208.0 402.0 1808.0 9462.0 5687.0 0 0 c 0 0 0 11279.0 7103.0 5622.0 33328.0 583.0 25275.0 32504.0 563.0 386.0 2555.0 19052.0 10485.0 11760.0 0 0 g 0 0 0 8118.0 8444.0 21884.0 354.0 849.0 7336.0 932.0 366.0 33468.0 1699.0 4440.0 6202.0 7495.0 0 0 t 0 0 0 7728.0 9291.0 2245.0 269.0 587.0 1226.0 330.0 33130.0 238.0 29644.0 9000.0 8151.0 9358.0 0 0
MA0103.3_shift4 (ZEB1)				; oligos_7nt_mkv5_m6 versus MA0103.3 (ZEB1); m=7/36; ncol2=11; w=11; offset=1; strand=D; shift=4; score=0.741271; ----ssCACCTGsss--- ; cor=; Ncor= a 0 0 0 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 0 0 c 0 0 0 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 0 0 g 0 0 0 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 0 0 t 0 0 0 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0 0 0
MA1621.1_shift2 (Rbpjl)				; oligos_7nt_mkv5_m6 versus MA1621.1 (Rbpjl); m=8/36; ncol2=14; w=13; offset=-1; strand=D; shift=2; score=0.738535; --svmaCACCTGtsyc-- ; cor=; Ncor= a 0 0 2006.0 2466.0 3369.0 6005.0 139.0 9386.0 84.0 234.0 63.0 102.0 569.0 1539.0 2273.0 2082.0 0 0 c 0 0 2881.0 2427.0 3117.0 1373.0 9273.0 70.0 8533.0 9005.0 144.0 131.0 1718.0 3247.0 2884.0 3003.0 0 0 g 0 0 2476.0 2549.0 1802.0 1492.0 103.0 110.0 672.0 317.0 132.0 9295.0 1581.0 2687.0 1958.0 2281.0 0 0 t 0 0 2289.0 2210.0 1364.0 782.0 137.0 86.0 363.0 96.0 9313.0 124.0 5784.0 2179.0 2537.0 2286.0 0 0
MA1620.1_shift3 (Ptf1a(var.3))				; oligos_7nt_mkv5_m6 versus MA1620.1 (Ptf1a(var.3)); m=9/36; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.728923; ---rmaCACCTGtky--- ; cor=; Ncor= a 0 0 0 2834.0 2613.0 6867.0 184.0 10033.0 116.0 256.0 85.0 68.0 527.0 1678.0 2293.0 0 0 0 c 0 0 0 2469.0 3700.0 1188.0 9887.0 60.0 8567.0 9612.0 94.0 109.0 1615.0 2527.0 3004.0 0 0 0 g 0 0 0 2664.0 2379.0 1410.0 113.0 84.0 1182.0 294.0 98.0 9972.0 1516.0 3341.0 2183.0 0 0 0 t 0 0 0 2324.0 1599.0 826.0 107.0 114.0 426.0 129.0 10014.0 142.0 6633.0 2745.0 2811.0 0 0 0
MA1558.1_rc_shift4 (SNAI1_rc)				; oligos_7nt_mkv5_m6 versus MA1558.1_rc (SNAI1_rc); m=10/36; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.698513; ----yrCACCTGyh---- ; cor=; Ncor= a 0 0 0 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 0 0 c 0 0 0 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 0 0 g 0 0 0 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 0 0 t 0 0 0 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0 0 0
MA0500.2_shift3 (MYOG)				; oligos_7nt_mkv5_m6 versus MA0500.2 (MYOG); m=11/36; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.688892; ---sarCAGCTGyts--- ; cor=; Ncor= a 0 0 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 0 0 c 0 0 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 0 0 g 0 0 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 0 0 t 0 0 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0 0 0
MA1559.1_rc_shift4 (SNAI3_rc)				; oligos_7nt_mkv5_m6 versus MA1559.1_rc (SNAI3_rc); m=12/36; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.682293; ----trCACCTGyt---- ; cor=; Ncor= a 0 0 0 0 553.0 3161.0 30.0 6248.0 0.0 43.0 3.0 35.0 183.0 1110.0 0 0 0 0 c 0 0 0 0 1569.0 1701.0 6248.0 28.0 6248.0 6248.0 34.0 0.0 2331.0 1525.0 0 0 0 0 g 0 0 0 0 688.0 6248.0 0.0 12.0 18.0 29.0 0.0 6248.0 0.0 661.0 0 0 0 0 t 0 0 0 0 4680.0 432.0 94.0 0.0 0.0 118.0 6248.0 23.0 3917.0 2952.0 0 0 0 0
MA0521.1_rc_shift3 (Tcf12_rc)				; oligos_7nt_mkv5_m6 versus MA0521.1_rc (Tcf12_rc); m=13/36; ncol2=11; w=11; offset=0; strand=R; shift=3; score=0.643766; ---cwsCAGCTGYy---- ; cor=; Ncor= a 0 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 0 0 c 0 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 0 0 g 0 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 0 0 t 0 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0 0 0
MA0820.1_shift4 (FIGLA)				; oligos_7nt_mkv5_m6 versus MA0820.1 (FIGLA); m=14/36; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.628067; ----wmCACCTGkw---- ; cor=; Ncor= a 0 0 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 0 0 0 c 0 0 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 0 0 0 g 0 0 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 0 0 0 t 0 0 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0 0 0 0
MA1100.2_rc_shift4 (ASCL1_rc)				; oligos_7nt_mkv5_m6 versus MA1100.2_rc (ASCL1_rc); m=15/36; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.624269; ----rgCAGCTGyy---- ; cor=; Ncor= a 0 0 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 0 0 c 0 0 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 0 0 g 0 0 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 0 0 t 0 0 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0 0 0
MA0744.2_rc_shift3 (SCRT2_rc)				; oligos_7nt_mkv5_m6 versus MA0744.2_rc (SCRT2_rc); m=16/36; ncol2=16; w=13; offset=0; strand=R; shift=3; score=0.614144; ---waccACCTGTTGmwy ; cor=; Ncor= a 0 0 0 21453.0 18751.0 15588.0 11335.0 58889.0 2140.0 1471.0 1184.0 204.0 953.0 4384.0 3732.0 17252.0 16873.0 12071.0 c 0 0 0 12430.0 14716.0 25288.0 38133.0 1168.0 60636.0 56105.0 252.0 319.0 1878.0 2265.0 1339.0 35769.0 12473.0 17497.0 g 0 0 0 13846.0 16085.0 11351.0 5661.0 3475.0 972.0 728.0 294.0 64856.0 413.0 5536.0 59161.0 7236.0 6319.0 12732.0 t 0 0 0 17881.0 16058.0 13383.0 10481.0 2078.0 1862.0 7306.0 63880.0 231.0 62366.0 53425.0 1378.0 5353.0 29945.0 23310.0
MA0816.1_shift4 (Ascl2)				; oligos_7nt_mkv5_m6 versus MA0816.1 (Ascl2); m=17/36; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.610689; ----arCAGCTGyy---- ; cor=; Ncor= a 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 0 0 c 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 0 0 g 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 0 0 t 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0 0 0
MA0743.2_rc_shift3 (SCRT1_rc)				; oligos_7nt_mkv5_m6 versus MA0743.2_rc (SCRT1_rc); m=18/36; ncol2=16; w=13; offset=0; strand=R; shift=3; score=0.608068; ---wacCACCTGTTGmwt ; cor=; Ncor= a 0 0 0 19839.0 18454.0 13726.0 7910.0 57969.0 1579.0 1305.0 1058.0 215.0 1002.0 4017.0 2621.0 31975.0 24326.0 12449.0 c 0 0 0 11049.0 13470.0 26973.0 41190.0 259.0 56500.0 51330.0 159.0 224.0 1566.0 1835.0 1297.0 16396.0 10154.0 14514.0 g 0 0 0 12837.0 14903.0 8788.0 3296.0 1098.0 466.0 557.0 234.0 59557.0 370.0 8751.0 54835.0 7425.0 8693.0 10314.0 t 0 0 0 16484.0 13382.0 10722.0 7813.0 883.0 1664.0 7017.0 58758.0 213.0 57271.0 45606.0 1456.0 4413.0 17036.0 22932.0
MA0048.2_shift4 (NHLH1)				; oligos_7nt_mkv5_m6 versus MA0048.2 (NHLH1); m=19/36; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.605968; ----cGCAGCTGCk---- ; cor=; Ncor= a 0 0 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 0 c 0 0 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 0 g 0 0 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 0 t 0 0 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0 0
MA1628.1_rc_shift6 (Zic1::Zic2_rc)				; oligos_7nt_mkv5_m6 versus MA1628.1_rc (Zic1::Zic2_rc); m=20/36; ncol2=11; w=10; offset=3; strand=R; shift=6; score=0.587871; ------ysCCTGCTGbg- ; cor=; Ncor= a 0 0 0 0 0 0 1708.0 2172.0 124.0 90.0 4.0 428.0 74.0 4.0 163.0 1473.0 994.0 0 c 0 0 0 0 0 0 3506.0 2775.0 9631.0 9279.0 627.0 96.0 9527.0 266.0 106.0 2773.0 2206.0 0 g 0 0 0 0 0 0 2154.0 2516.0 91.0 512.0 311.0 9293.0 195.0 384.0 9594.0 2589.0 4620.0 0 t 0 0 0 0 0 0 2524.0 2429.0 46.0 11.0 8950.0 75.0 96.0 9238.0 29.0 3057.0 2072.0 0
MA1472.1_rc_shift4 (BHLHA15(var.2)_rc)				; oligos_7nt_mkv5_m6 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=21/36; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.558625; ----rrCAGCTGbt---- ; cor=; Ncor= a 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 0 c 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 0 g 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 0 t 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0 0
MA1560.1_shift4 (SOHLH2)				; oligos_7nt_mkv5_m6 versus MA1560.1 (SOHLH2); m=22/36; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.557003; ----ygCACGTGcr---- ; cor=; Ncor= a 0 0 0 0 230.0 172.0 45.0 1212.0 0.0 14.0 36.0 41.0 272.0 381.0 0 0 0 0 c 0 0 0 0 485.0 264.0 1212.0 0.0 1212.0 0.0 65.0 4.0 1212.0 239.0 0 0 0 0 g 0 0 0 0 184.0 1212.0 29.0 41.0 11.0 1212.0 0.0 1212.0 172.0 369.0 0 0 0 0 t 0 0 0 0 313.0 276.0 70.0 0.0 7.0 15.0 1212.0 4.0 153.0 224.0 0 0 0 0
MA0825.1_rc_shift4 (MNT_rc)				; oligos_7nt_mkv5_m6 versus MA0825.1_rc (MNT_rc); m=23/36; ncol2=10; w=10; offset=1; strand=R; shift=4; score=0.549632; ----rgCACGTGbt---- ; cor=; Ncor= a 0 0 0 0 219.0 120.0 25.0 681.0 0.0 16.0 21.0 5.0 63.0 129.0 0 0 0 0 c 0 0 0 0 75.0 131.0 681.0 15.0 681.0 7.0 0.0 0.0 203.0 145.0 0 0 0 0 g 0 0 0 0 229.0 281.0 0.0 0.0 0.0 681.0 0.0 681.0 228.0 128.0 0 0 0 0 t 0 0 0 0 159.0 150.0 0.0 0.0 15.0 0.0 681.0 27.0 187.0 279.0 0 0 0 0
MA1635.1_shift4 (BHLHE22(var.2))				; oligos_7nt_mkv5_m6 versus MA1635.1 (BHLHE22(var.2)); m=24/36; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.545086; ----csCAGCTGsg---- ; cor=; Ncor= a 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 0 0 c 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 0 0 g 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 0 0 t 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0 0 0
MA0058.3_shift4 (MAX)				; oligos_7nt_mkv5_m6 versus MA0058.3 (MAX); m=25/36; ncol2=10; w=10; offset=1; strand=D; shift=4; score=0.543584; ----amCACGTGcy---- ; cor=; Ncor= a 0 0 0 0 3307.0 1915.0 39.0 6876.0 0.0 329.0 69.0 0.0 1341.0 1122.0 0 0 0 0 c 0 0 0 0 1556.0 2809.0 6876.0 0.0 6876.0 39.0 159.0 27.0 2450.0 2225.0 0 0 0 0 g 0 0 0 0 1295.0 1514.0 0.0 87.0 7.0 6876.0 20.0 6876.0 1638.0 986.0 0 0 0 0 t 0 0 0 0 719.0 637.0 0.0 38.0 229.0 19.0 6876.0 36.0 1446.0 2543.0 0 0 0 0
MA1629.1_rc_shift5 (Zic2_rc)				; oligos_7nt_mkv5_m6 versus MA1629.1_rc (Zic2_rc); m=26/36; ncol2=14; w=11; offset=2; strand=R; shift=5; score=0.542762; -----cyyCCTGCTGtGm ; cor=; Ncor= a 0 0 0 0 0 2104.0 1641.0 2472.0 154.0 410.0 441.0 298.0 67.0 268.0 120.0 2437.0 240.0 3893.0 c 0 0 0 0 0 5314.0 4979.0 4911.0 11465.0 11184.0 735.0 269.0 11484.0 186.0 188.0 829.0 585.0 3821.0 g 0 0 0 0 0 2168.0 1661.0 1476.0 204.0 133.0 118.0 11272.0 228.0 391.0 11476.0 1765.0 9933.0 1755.0 t 0 0 0 0 0 2333.0 3638.0 3060.0 96.0 192.0 10625.0 80.0 140.0 11074.0 135.0 6888.0 1161.0 2450.0
MA1585.1_rc_shift6 (ZKSCAN1_rc)				; oligos_7nt_mkv5_m6 versus MA1585.1_rc (ZKSCAN1_rc); m=27/36; ncol2=10; w=10; offset=3; strand=R; shift=6; score=0.539339; ------caCCTACTrT-- ; cor=; Ncor= a 0 0 0 0 0 0 494.0 3469.0 27.0 34.0 0.0 6127.0 12.0 0.0 3308.0 454.0 0 0 c 0 0 0 0 0 0 2880.0 750.0 6075.0 5980.0 0.0 0.0 6092.0 20.0 364.0 584.0 0 0 g 0 0 0 0 0 0 1480.0 1303.0 12.0 101.0 48.0 0.0 5.0 53.0 2268.0 456.0 0 0 t 0 0 0 0 0 0 1273.0 605.0 13.0 12.0 6079.0 0.0 18.0 6054.0 187.0 4633.0 0 0
MA0807.1_rc_shift3 (TBX5_rc)				; oligos_7nt_mkv5_m6 versus MA0807.1_rc (TBX5_rc); m=28/36; ncol2=8; w=8; offset=0; strand=R; shift=3; score=0.50578; ---TmACACCT------- ; cor=; Ncor= a 0 0 0 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 0 0 c 0 0 0 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 0 0 g 0 0 0 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 0 0 t 0 0 0 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0 0 0
MA1529.1_rc_shift0 (NHLH2_rc)				; oligos_7nt_mkv5_m6 versus MA1529.1_rc (NHLH2_rc); m=29/36; ncol2=18; w=13; offset=-3; strand=R; shift=0; score=0.505669; gkGrCGCAGCTGCKrCcc ; cor=; Ncor= a 4228.0 3330.0 2533.0 13503.0 740.0 1230.0 0.0 21358.0 0.0 1054.0 1.0 5.0 2634.0 151.0 5394.0 2763.0 5198.0 4143.0 c 2264.0 1579.0 1183.0 1520.0 20977.0 275.0 21363.0 3.0 2266.0 20096.0 26.0 2.0 18930.0 671.0 4908.0 18450.0 13903.0 9732.0 g 11271.0 13462.0 18351.0 7207.0 204.0 20611.0 2.0 14.0 20268.0 2459.0 0.0 21359.0 2324.0 15451.0 6141.0 1065.0 2219.0 2655.0 t 3601.0 6392.0 3766.0 1184.0 210.0 693.0 0.0 0.0 525.0 6.0 21364.0 2.0 2378.0 5603.0 4921.0 3741.0 4312.0 4834.0
MA0806.1_rc_shift3 (TBX4_rc)				; oligos_7nt_mkv5_m6 versus MA0806.1_rc (TBX4_rc); m=30/36; ncol2=8; w=8; offset=0; strand=R; shift=3; score=0.497384; ---TcACACCT------- ; cor=; Ncor= a 0 0 0 965.0 8384.0 18646.0 0.0 18646.0 33.0 1162.0 1283.0 0 0 0 0 0 0 0 c 0 0 0 1733.0 18646.0 304.0 18646.0 191.0 18646.0 18646.0 2353.0 0 0 0 0 0 0 0 g 0 0 0 588.0 5396.0 2859.0 0.0 1644.0 189.0 2328.0 437.0 0 0 0 0 0 0 0 t 0 0 0 18646.0 1355.0 1551.0 0.0 0.0 38.0 3082.0 18646.0 0 0 0 0 0 0 0
MA0803.1_rc_shift3 (TBX15_rc)				; oligos_7nt_mkv5_m6 versus MA0803.1_rc (TBX15_rc); m=31/36; ncol2=8; w=8; offset=0; strand=R; shift=3; score=0.474595; ---TCACACCT------- ; cor=; Ncor= a 0 0 0 96.0 937.0 10502.0 0.0 10502.0 0.0 103.0 112.0 0 0 0 0 0 0 0 c 0 0 0 306.0 10502.0 324.0 10502.0 245.0 10502.0 10502.0 664.0 0 0 0 0 0 0 0 g 0 0 0 71.0 454.0 435.0 8.0 175.0 7.0 101.0 74.0 0 0 0 0 0 0 0 t 0 0 0 10502.0 44.0 140.0 0.0 61.0 19.0 458.0 10502.0 0 0 0 0 0 0 0
MA0805.1_rc_shift3 (TBX1_rc)				; oligos_7nt_mkv5_m6 versus MA0805.1_rc (TBX1_rc); m=32/36; ncol2=8; w=8; offset=0; strand=R; shift=3; score=0.460678; ---TCACACCT------- ; cor=; Ncor= a 0 0 0 0.0 1039.0 11931.0 0.0 11931.0 0.0 669.0 564.0 0 0 0 0 0 0 0 c 0 0 0 18.0 11931.0 109.0 11931.0 141.0 11931.0 11931.0 1007.0 0 0 0 0 0 0 0 g 0 0 0 33.0 720.0 613.0 5.0 214.0 0.0 711.0 113.0 0 0 0 0 0 0 0 t 0 0 0 11931.0 141.0 142.0 0.0 28.0 0.0 1560.0 11931.0 0 0 0 0 0 0 0
MA1567.1_rc_shift2 (TBX6_rc)				; oligos_7nt_mkv5_m6 versus MA1567.1_rc (TBX6_rc); m=33/36; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.458135; --tTmACACcty------ ; cor=; Ncor= a 0 0 2330.0 713.0 5964.0 11087.0 12.0 11087.0 0.0 1058.0 2157.0 2456.0 0 0 0 0 0 0 c 0 0 2141.0 2251.0 11087.0 320.0 11087.0 0.0 11087.0 11087.0 3347.0 4003.0 0 0 0 0 0 0 g 0 0 2066.0 652.0 4876.0 3053.0 0.0 1002.0 63.0 2913.0 1173.0 1630.0 0 0 0 0 0 0 t 0 0 4550.0 11087.0 1430.0 552.0 14.0 44.0 58.0 1882.0 11087.0 2998.0 0 0 0 0 0 0
MA0801.1_rc_shift3 (MGA_rc)				; oligos_7nt_mkv5_m6 versus MA0801.1_rc (MGA_rc); m=34/36; ncol2=8; w=8; offset=0; strand=R; shift=3; score=0.453171; ---TCACACCT------- ; cor=; Ncor= a 0 0 0 274.0 6465.0 30489.0 11.0 30489.0 104.0 1929.0 4160.0 0 0 0 0 0 0 0 c 0 0 0 920.0 30489.0 381.0 30489.0 96.0 30489.0 30489.0 8873.0 0 0 0 0 0 0 0 g 0 0 0 110.0 1753.0 3089.0 1.0 3534.0 509.0 3737.0 1151.0 0 0 0 0 0 0 0 t 0 0 0 30489.0 689.0 1042.0 14.0 12.0 16.0 4310.0 30489.0 0 0 0 0 0 0 0
MA0622.1_rc_shift5 (Mlxip_rc)				; oligos_7nt_mkv5_m6 versus MA0622.1_rc (Mlxip_rc); m=35/36; ncol2=8; w=8; offset=2; strand=R; shift=5; score=0.441712; -----mCACGTGv----- ; cor=; Ncor= a 0 0 0 0 0 499.0 0.0 999.0 0.0 0.0 0.0 0.0 263.0 0 0 0 0 0 c 0 0 0 0 0 250.0 999.0 0.0 999.0 0.0 0.0 0.0 421.0 0 0 0 0 0 g 0 0 0 0 0 63.0 0.0 0.0 0.0 999.0 0.0 999.0 263.0 0 0 0 0 0 t 0 0 0 0 0 188.0 0.0 0.0 0.0 0.0 999.0 0.0 53.0 0 0 0 0 0
MA0802.1_rc_shift1 (TBR1_rc)				; oligos_7nt_mkv5_m6 versus MA0802.1_rc (TBR1_rc); m=36/36; ncol2=10; w=8; offset=-2; strand=R; shift=1; score=0.408525; -tTTCACACCT------- ; cor=; Ncor= a 0 5846.0 4576.0 205.0 7001.0 34509.0 4.0 34509.0 213.0 4480.0 1433.0 0 0 0 0 0 0 0 c 0 4537.0 1488.0 584.0 34509.0 157.0 34509.0 88.0 34509.0 34509.0 3329.0 0 0 0 0 0 0 0 g 0 5619.0 2575.0 90.0 2551.0 4742.0 6.0 1759.0 254.0 3255.0 359.0 0 0 0 0 0 0 0 t 0 18507.0 25869.0 34509.0 1175.0 2386.0 0.0 39.0 70.0 6880.0 34509.0 0 0 0 0 0 0 0

One-to-n matrix alignment; reference matrix: positions_7nt_m10_shift3 ; 51 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
positions_7nt_m10_shift3 (positions_7nt_m10positions_7nt_m10)				; positions_7nt_m10 (positions_7nt_m10positions_7nt_m10); m=0 (reference); ncol1=13; shift=3; ncol=16; ---ggaACAGGTGgsv ; Alignment reference a 0 0 0 1287 1090 3409 4949 48 5109 59 247 73 7 325 1083 1371 c 0 0 0 979 1268 531 67 5061 16 41 503 54 11 812 1492 1362 g 0 0 0 2125 1765 1116 129 69 29 5027 4331 36 5142 3282 1390 1420 t 0 0 0 800 1068 135 46 13 37 64 110 5028 31 772 1226 1038
MA0499.2_rc_shift3 (MYOD1_rc)				; positions_7nt_m10 versus MA0499.2_rc (MYOD1_rc); m=1/50; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.919761; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0
MA0745.2_rc_shift3 (SNAI2_rc)				; positions_7nt_m10 versus MA0745.2_rc (SNAI2_rc); m=2/50; ncol2=13; w=13; offset=0; strand=R; shift=3; score= 0.9096; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0
MA1621.1_rc_shift3 (Rbpjl_rc)				; positions_7nt_m10 versus MA1621.1_rc (Rbpjl_rc); m=3/50; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.838115; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)				; positions_7nt_m10 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=4/50; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.835373; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0
MA0830.2_rc_shift3 (TCF4_rc)				; positions_7nt_m10 versus MA0830.2_rc (TCF4_rc); m=5/50; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.805787; ---ssggCAGGTGccg ; cor=; Ncor= a 0 0 0 6827.0 6430.0 6126.0 3555.0 242.0 27398.0 188.0 751.0 512.0 215.0 1737.0 7059.0 6225.0 c 0 0 0 7662.0 7964.0 4933.0 5281.0 28432.0 679.0 1197.0 1733.0 1295.0 321.0 18498.0 8618.0 7140.0 g 0 0 0 9843.0 8658.0 12872.0 18935.0 540.0 1016.0 27724.0 26765.0 635.0 28686.0 5062.0 6754.0 10052.0 t 0 0 0 5133.0 6413.0 5534.0 1694.0 251.0 372.0 356.0 216.0 27023.0 243.0 4168.0 7034.0 6048.0
MA1642.1_shift3 (NEUROG2(var.2))				; positions_7nt_m10 versus MA1642.1 (NEUROG2(var.2)); m=6/50; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.792761; ---rrraCAGATGGyv ; cor=; Ncor= a 0 0 0 8690.0 9047.0 12089.0 16448.0 278.0 33720.0 400.0 32746.0 649.0 280.0 1523.0 6665.0 9464.0 c 0 0 0 7353.0 6843.0 6467.0 8154.0 33559.0 211.0 793.0 952.0 904.0 205.0 2966.0 10441.0 9034.0 g 0 0 0 10813.0 10123.0 11114.0 8039.0 317.0 301.0 30392.0 418.0 323.0 33422.0 24998.0 7581.0 8709.0 t 0 0 0 7535.0 8378.0 4721.0 1750.0 237.0 159.0 2806.0 275.0 32515.0 484.0 4904.0 9704.0 7184.0
MA1631.1_rc_shift3 (ASCL1(var.2)_rc)				; positions_7nt_m10 versus MA1631.1_rc (ASCL1(var.2)_rc); m=7/50; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.788825; ---gsrGCAGGTGchg ; cor=; Ncor= a 0 0 0 8032.0 7779.0 9017.0 2394.0 249.0 32756.0 151.0 815.0 618.0 289.0 3290.0 8805.0 7347.0 c 0 0 0 8356.0 8939.0 2966.0 2719.0 33411.0 492.0 607.0 3209.0 860.0 321.0 18576.0 8601.0 8371.0 g 0 0 0 11996.0 10555.0 17883.0 28844.0 445.0 740.0 33402.0 30169.0 563.0 33562.0 6654.0 7998.0 11805.0 t 0 0 0 5972.0 7083.0 4490.0 399.0 251.0 368.0 196.0 163.0 32315.0 184.0 5836.0 8952.0 6833.0
MA0743.2_shift0 (SCRT1)				; positions_7nt_m10 versus MA0743.2 (SCRT1); m=8/50; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.725751; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0
MA0744.2_shift0 (SCRT2)				; positions_7nt_m10 versus MA0744.2 (SCRT2); m=9/50; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.723962; rrwkCAACAGGTggtw ; cor=; Ncor= a 18855.0 23310.0 29945.0 5353.0 1378.0 53425.0 62366.0 231.0 63880.0 7306.0 1862.0 2078.0 10481.0 13383.0 16058.0 17881.0 c 13345.0 12732.0 6319.0 7236.0 59161.0 5536.0 413.0 64856.0 294.0 728.0 972.0 3475.0 5661.0 11351.0 16085.0 13846.0 g 17680.0 17497.0 12473.0 35769.0 1339.0 2265.0 1878.0 319.0 252.0 56105.0 60636.0 1168.0 38133.0 25288.0 14716.0 12430.0 t 15730.0 12071.0 16873.0 17252.0 3732.0 4384.0 953.0 204.0 1184.0 1471.0 2140.0 58889.0 11335.0 15588.0 18751.0 21453.0
MA0521.1_shift5 (Tcf12)				; positions_7nt_m10 versus MA0521.1 (Tcf12); m=10/50; ncol2=11; w=11; offset=2; strand=D; shift=5; score=0.719727; -----rRCAGCTGswg ; cor=; Ncor= a 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 c 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 g 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 t 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0
MA0103.3_rc_shift4 (ZEB1_rc)				; positions_7nt_m10 versus MA0103.3_rc (ZEB1_rc); m=11/50; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.716319; ----sssCAGGTGss- ; cor=; Ncor= a 0 0 0 0 3856.0 3153.0 3408.0 129.0 19269.0 30.0 122.0 1.0 662.0 4715.0 3692.0 0 c 0 0 0 0 5828.0 6601.0 5178.0 19381.0 355.0 649.0 97.0 223.0 158.0 5179.0 5228.0 0 g 0 0 0 0 6955.0 6117.0 9561.0 178.0 501.0 19257.0 19878.0 0.0 19195.0 5550.0 7998.0 0 t 0 0 0 0 3490.0 4258.0 1982.0 441.0 4.0 193.0 32.0 19905.0 114.0 4685.0 3211.0 0
MA1619.1_rc_shift4 (Ptf1a(var.2)_rc)				; positions_7nt_m10 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=12/50; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.714989; ----rmaCAGCTGtky ; cor=; Ncor= a 0 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 c 0 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 g 0 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 t 0 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0
MA1641.1_shift4 (MYF5)				; positions_7nt_m10 versus MA1641.1 (MYF5); m=13/50; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.713659; ----gvaCAGCTGtbc ; cor=; Ncor= a 0 0 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 c 0 0 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 g 0 0 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 t 0 0 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0
MA0820.1_rc_shift5 (FIGLA_rc)				; positions_7nt_m10 versus MA0820.1_rc (FIGLA_rc); m=14/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.709668; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0
MA1105.2_shift3 (GRHL2)				; positions_7nt_m10 versus MA1105.2 (GRHL2); m=15/50; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.70717; ---arAACAGGTTtk- ; cor=; Ncor= a 0 0 0 14483.0 17842.0 36467.0 37065.0 503.0 34024.0 2824.0 642.0 1878.0 1752.0 7061.0 8868.0 0 c 0 0 0 9741.0 6996.0 1147.0 712.0 40446.0 1543.0 581.0 987.0 2331.0 2000.0 9341.0 8528.0 0 g 0 0 0 9161.0 10776.0 2646.0 2841.0 609.0 485.0 37226.0 39624.0 748.0 1220.0 7961.0 10536.0 0 t 0 0 0 8493.0 6264.0 1618.0 1260.0 320.0 5826.0 1247.0 625.0 36921.0 36906.0 17515.0 13946.0 0
MA1109.1_shift4 (NEUROD1)				; positions_7nt_m10 versus MA1109.1 (NEUROD1); m=16/50; ncol2=13; w=12; offset=1; strand=D; shift=4; score=0.697747; ----graCAGATGGyr ; cor=; Ncor= a 0 0 0 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 c 0 0 0 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 g 0 0 0 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 t 0 0 0 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0
MA0832.1_shift3 (Tcf21)				; positions_7nt_m10 versus MA0832.1 (Tcf21); m=17/50; ncol2=14; w=13; offset=0; strand=D; shift=3; score=0.697512; ---ryAACAGCTGTTr ; cor=; Ncor= a 0 0 0 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 c 0 0 0 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 g 0 0 0 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 t 0 0 0 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0
MA1559.1_shift5 (SNAI3)				; positions_7nt_m10 versus MA1559.1 (SNAI3); m=18/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.695331; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0
MA1485.1_rc_shift3 (FERD3L_rc)				; positions_7nt_m10 versus MA1485.1_rc (FERD3L_rc); m=19/50; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.691964; ---GTrACAGCTGkyr ; cor=; Ncor= a 0 0 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 c 0 0 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 g 0 0 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 t 0 0 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0
MA0500.2_rc_shift4 (MYOG_rc)				; positions_7nt_m10 versus MA0500.2_rc (MYOG_rc); m=20/50; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.669889; ----sarCAGCTGyts ; cor=; Ncor= a 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 c 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 g 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 t 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0
MA1648.1_rc_shift4 (TCF12(var.2)_rc)				; positions_7nt_m10 versus MA1648.1_rc (TCF12(var.2)_rc); m=21/50; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.662907; ----srGCAGGTGss- ; cor=; Ncor= a 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 0 c 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 0 g 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 0 t 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0 0
MA1558.1_shift5 (SNAI1)				; positions_7nt_m10 versus MA1558.1 (SNAI1); m=22/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.662827; -----drCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 5274.0 6993.0 446.0 19982.0 1766.0 72.0 38.0 706.0 1639.0 10088.0 0 c 0 0 0 0 0 3187.0 501.0 19982.0 297.0 517.0 5.0 0.0 0.0 10938.0 4592.0 0 g 0 0 0 0 0 6410.0 12989.0 275.0 91.0 19982.0 19982.0 42.0 19982.0 5306.0 9894.0 0 t 0 0 0 0 0 5112.0 3518.0 340.0 568.0 306.0 28.0 19982.0 311.0 9044.0 6356.0 0
MA1618.1_shift4 (Ptf1a)				; positions_7nt_m10 versus MA1618.1 (Ptf1a); m=23/50; ncol2=13; w=12; offset=1; strand=D; shift=4; score=0.658939; ----dmaCAGATGttk ; cor=; Ncor= a 0 0 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 c 0 0 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 g 0 0 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 t 0 0 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0
MA0522.3_rc_shift4 (TCF3_rc)				; positions_7nt_m10 versus MA0522.3_rc (TCF3_rc); m=24/50; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.656901; ----ssGCAGGTGbs- ; cor=; Ncor= a 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 0 c 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 0 g 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 0 t 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0 0
MA0665.1_rc_shift5 (MSC_rc)				; positions_7nt_m10 versus MA0665.1_rc (MSC_rc); m=25/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.612474; -----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 c 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 g 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 t 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0
MA1472.1_rc_shift5 (BHLHA15(var.2)_rc)				; positions_7nt_m10 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=26/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.603872; -----rrCAGCTGbt- ; cor=; Ncor= a 0 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 c 0 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 g 0 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 t 0 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0
MA0667.1_rc_shift5 (MYF6_rc)				; positions_7nt_m10 versus MA0667.1_rc (MYF6_rc); m=27/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.594267; -----RACAGyTGTT- ; cor=; Ncor= a 0 0 0 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 c 0 0 0 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 g 0 0 0 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 t 0 0 0 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0
MA1467.1_shift5 (ATOH1(var.2))				; positions_7nt_m10 versus MA1467.1 (ATOH1(var.2)); m=28/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.593279; -----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0
MA0091.1_rc_shift5 (TAL1::TCF3_rc)				; positions_7nt_m10 versus MA0091.1_rc (TAL1::TCF3_rc); m=29/50; ncol2=12; w=11; offset=2; strand=R; shift=5; score=0.591967; -----AmCAKMTGkTc ; cor=; Ncor= a 0 0 0 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 c 0 0 0 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 g 0 0 0 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 t 0 0 0 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0
MA1570.1_shift5 (TFAP4(var.2))				; positions_7nt_m10 versus MA1570.1 (TFAP4(var.2)); m=30/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.580105; -----ahCAyrTGkt- ; cor=; Ncor= a 0 0 0 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 c 0 0 0 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 g 0 0 0 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 t 0 0 0 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0
MA0819.1_shift5 (CLOCK)				; positions_7nt_m10 versus MA0819.1 (CLOCK); m=31/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.577219; -----aACACGTGty- ; cor=; Ncor= a 0 0 0 0 0 226.0 429.0 11.0 429.0 16.0 40.0 3.0 0.0 1.0 89.0 0 c 0 0 0 0 0 35.0 85.0 429.0 5.0 429.0 0.0 5.0 3.0 152.0 128.0 0 g 0 0 0 0 0 93.0 89.0 2.0 15.0 0.0 429.0 5.0 429.0 110.0 39.0 0 t 0 0 0 0 0 75.0 13.0 2.0 0.0 28.0 0.0 429.0 9.0 429.0 174.0 0
MA0691.1_shift5 (TFAP4)				; positions_7nt_m10 versus MA0691.1 (TFAP4); m=32/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.576351; -----AwCAGCTGwT- ; cor=; Ncor= a 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 c 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 g 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 t 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0
MA1100.2_shift5 (ASCL1)				; positions_7nt_m10 versus MA1100.2 (ASCL1); m=33/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.574489; -----rrCAGCTGcy- ; cor=; Ncor= a 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 c 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 g 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 t 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0
MA0626.1_rc_shift5 (Npas2_rc)				; positions_7nt_m10 versus MA0626.1_rc (Npas2_rc); m=34/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.570008; -----kaCACGTGsh- ; cor=; Ncor= a 0 0 0 0 0 202.0 566.0 0.0 999.0 0.0 0.0 0.0 0.0 48.0 257.0 0 c 0 0 0 0 0 202.0 188.0 918.0 0.0 918.0 0.0 0.0 0.0 420.0 293.0 0 g 0 0 0 0 0 299.0 172.0 0.0 0.0 0.0 918.0 0.0 999.0 377.0 177.0 0 t 0 0 0 0 0 297.0 74.0 81.0 0.0 81.0 81.0 999.0 0.0 154.0 273.0 0
MA1638.1_shift5 (HAND2)				; positions_7nt_m10 versus MA1638.1 (HAND2); m=35/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.562408; -----amCAGATGby- ; cor=; Ncor= a 0 0 0 0 0 10136.0 8836.0 19.0 29222.0 12.0 30192.0 14.0 234.0 5217.0 6165.0 0 c 0 0 0 0 0 5564.0 11298.0 30062.0 410.0 42.0 30.0 2276.0 149.0 7690.0 10227.0 0 g 0 0 0 0 0 7463.0 6994.0 132.0 647.0 30144.0 38.0 31.0 29851.0 8878.0 6108.0 0 t 0 0 0 0 0 7120.0 3155.0 70.0 4.0 85.0 23.0 27962.0 49.0 8498.0 7783.0 0
MA0816.1_rc_shift5 (Ascl2_rc)				; positions_7nt_m10 versus MA0816.1_rc (Ascl2_rc); m=36/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.559573; -----rrCAGCTGyt- ; cor=; Ncor= a 0 0 0 0 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 c 0 0 0 0 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 g 0 0 0 0 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 t 0 0 0 0 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0
MA1635.1_shift5 (BHLHE22(var.2))				; positions_7nt_m10 versus MA1635.1 (BHLHE22(var.2)); m=37/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.554356; -----csCAGCTGsg- ; cor=; Ncor= a 0 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 c 0 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 g 0 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 t 0 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0
MA0100.3_rc_shift5 (MYB_rc)				; positions_7nt_m10 versus MA0100.3_rc (MYB_rc); m=38/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.552645; -----kdCAGTTGvk- ; cor=; Ncor= a 0 0 0 0 0 352.0 497.0 0.0 1398.0 0.0 6.0 7.0 9.0 410.0 380.0 0 c 0 0 0 0 0 225.0 147.0 1516.0 68.0 0.0 0.0 39.0 5.0 397.0 300.0 0 g 0 0 0 0 0 528.0 482.0 3.0 60.0 1527.0 2.0 3.0 1513.0 428.0 422.0 0 t 0 0 0 0 0 422.0 401.0 8.0 1.0 0.0 1519.0 1478.0 0.0 292.0 425.0 0
MA0633.1_rc_shift5 (Twist2_rc)				; positions_7nt_m10 versus MA0633.1_rc (Twist2_rc); m=39/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.546405; -----mACATATGky- ; cor=; Ncor= a 0 0 0 0 0 365.0 745.0 0.0 1000.0 0.0 783.0 0.0 0.0 69.0 200.0 0 c 0 0 0 0 0 272.0 155.0 1000.0 0.0 211.0 0.0 0.0 0.0 69.0 298.0 0 g 0 0 0 0 0 181.0 50.0 0.0 0.0 0.0 217.0 0.0 1000.0 580.0 200.0 0 t 0 0 0 0 0 181.0 50.0 0.0 0.0 789.0 0.0 1000.0 0.0 282.0 302.0 0
MA1493.1_rc_shift5 (HES6_rc)				; positions_7nt_m10 versus MA1493.1_rc (HES6_rc); m=40/50; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.541619; -----rACACGTGCC- ; cor=; Ncor= a 0 0 0 0 0 209.0 439.0 0.0 439.0 0.0 16.0 11.0 15.0 13.0 43.0 0 c 0 0 0 0 0 0.0 0.0 439.0 29.0 439.0 9.0 9.0 19.0 439.0 439.0 0 g 0 0 0 0 0 152.0 21.0 0.0 7.0 12.0 439.0 0.0 439.0 35.0 39.0 0 t 0 0 0 0 0 79.0 33.0 0.0 0.0 10.0 2.0 439.0 17.0 16.0 12.0 0
MA0058.3_shift5 (MAX)				; positions_7nt_m10 versus MA0058.3 (MAX); m=41/50; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.540006; -----amCACGTGcy- ; cor=; Ncor= a 0 0 0 0 0 3307.0 1915.0 39.0 6876.0 0.0 329.0 69.0 0.0 1341.0 1122.0 0 c 0 0 0 0 0 1556.0 2809.0 6876.0 0.0 6876.0 39.0 159.0 27.0 2450.0 2225.0 0 g 0 0 0 0 0 1295.0 1514.0 0.0 87.0 7.0 6876.0 20.0 6876.0 1638.0 986.0 0 t 0 0 0 0 0 719.0 637.0 0.0 38.0 229.0 19.0 6876.0 36.0 1446.0 2543.0 0
MA0807.1_shift8 (TBX5)				; positions_7nt_m10 versus MA0807.1 (TBX5); m=42/50; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.499769; --------AGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1804.0 235.0 0.0 45.0 27.0 162.0 126.0 1804.0 c 0 0 0 0 0 0 0 0 89.0 190.0 0.0 131.0 0.0 225.0 616.0 76.0 g 0 0 0 0 0 0 0 0 409.0 1804.0 1804.0 166.0 1804.0 201.0 1804.0 343.0 t 0 0 0 0 0 0 0 0 207.0 133.0 28.0 1804.0 0.0 1804.0 915.0 283.0
MA0608.1_rc_shift6 (Creb3l2_rc)				; positions_7nt_m10 versus MA0608.1_rc (Creb3l2_rc); m=43/50; ncol2=9; w=9; offset=3; strand=R; shift=6; score=0.49593; ------hCACGTGkM- ; cor=; Ncor= a 0 0 0 0 0 0 498.0 1.0 996.0 1.0 1.0 1.0 1.0 126.0 250.0 0 c 0 0 0 0 0 0 250.0 854.0 1.0 996.0 1.0 1.0 126.0 1.0 745.0 0 g 0 0 0 0 0 0 2.0 143.0 1.0 1.0 996.0 1.0 872.0 623.0 2.0 0 t 0 0 0 0 0 0 250.0 1.0 1.0 1.0 1.0 996.0 1.0 250.0 2.0 0
MA0806.1_shift8 (TBX4)				; positions_7nt_m10 versus MA0806.1 (TBX4); m=44/50; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.48631; --------AGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18646.0 3082.0 38.0 0.0 0.0 1551.0 1355.0 18646.0 c 0 0 0 0 0 0 0 0 437.0 2328.0 189.0 1644.0 0.0 2859.0 5396.0 588.0 g 0 0 0 0 0 0 0 0 2353.0 18646.0 18646.0 191.0 18646.0 304.0 18646.0 1733.0 t 0 0 0 0 0 0 0 0 1283.0 1162.0 33.0 18646.0 0.0 18646.0 8384.0 965.0
MA0803.1_shift8 (TBX15)				; positions_7nt_m10 versus MA0803.1 (TBX15); m=45/50; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.470984; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10502.0 458.0 19.0 61.0 0.0 140.0 44.0 10502.0 c 0 0 0 0 0 0 0 0 74.0 101.0 7.0 175.0 8.0 435.0 454.0 71.0 g 0 0 0 0 0 0 0 0 664.0 10502.0 10502.0 245.0 10502.0 324.0 10502.0 306.0 t 0 0 0 0 0 0 0 0 112.0 103.0 0.0 10502.0 0.0 10502.0 937.0 96.0
MA0805.1_shift8 (TBX1)				; positions_7nt_m10 versus MA0805.1 (TBX1); m=46/50; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.455244; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11931.0 1560.0 0.0 28.0 0.0 142.0 141.0 11931.0 c 0 0 0 0 0 0 0 0 113.0 711.0 0.0 214.0 5.0 613.0 720.0 33.0 g 0 0 0 0 0 0 0 0 1007.0 11931.0 11931.0 141.0 11931.0 109.0 11931.0 18.0 t 0 0 0 0 0 0 0 0 564.0 669.0 0.0 11931.0 0.0 11931.0 1039.0 0.0
MA0622.1_rc_shift6 (Mlxip_rc)				; positions_7nt_m10 versus MA0622.1_rc (Mlxip_rc); m=47/50; ncol2=8; w=8; offset=3; strand=R; shift=6; score=0.452707; ------mCACGTGv-- ; cor=; Ncor= a 0 0 0 0 0 0 499.0 0.0 999.0 0.0 0.0 0.0 0.0 263.0 0 0 c 0 0 0 0 0 0 250.0 999.0 0.0 999.0 0.0 0.0 0.0 421.0 0 0 g 0 0 0 0 0 0 63.0 0.0 0.0 0.0 999.0 0.0 999.0 263.0 0 0 t 0 0 0 0 0 0 188.0 0.0 0.0 0.0 0.0 999.0 0.0 53.0 0 0
MA0801.1_shift8 (MGA)				; positions_7nt_m10 versus MA0801.1 (MGA); m=48/50; ncol2=8; w=8; offset=5; strand=D; shift=8; score=0.444013; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 30489.0 4310.0 16.0 12.0 14.0 1042.0 689.0 30489.0 c 0 0 0 0 0 0 0 0 1151.0 3737.0 509.0 3534.0 1.0 3089.0 1753.0 110.0 g 0 0 0 0 0 0 0 0 8873.0 30489.0 30489.0 96.0 30489.0 381.0 30489.0 920.0 t 0 0 0 0 0 0 0 0 4160.0 1929.0 104.0 30489.0 11.0 30489.0 6465.0 274.0
MA0607.1_rc_shift6 (Bhlha15_rc)				; positions_7nt_m10 versus MA0607.1_rc (Bhlha15_rc); m=49/50; ncol2=8; w=8; offset=3; strand=R; shift=6; score=0.434293; ------aCATATGs-- ; cor=; Ncor= a 0 0 0 0 0 0 614.0 0.0 999.0 0.0 799.0 0.0 0.0 1.0 0 0 c 0 0 0 0 0 0 154.0 999.0 0.0 0.0 200.0 0.0 0.0 286.0 0 0 g 0 0 0 0 0 0 231.0 0.0 0.0 200.0 0.0 0.0 999.0 571.0 0 0 t 0 0 0 0 0 0 1.0 0.0 0.0 799.0 0.0 999.0 0.0 143.0 0 0
MA0130.1_rc_shift10 (ZNF354C_rc)				; positions_7nt_m10 versus MA0130.1_rc (ZNF354C_rc); m=50/50; ncol2=6; w=6; offset=7; strand=R; shift=10; score=0.413388; ----------GTGGAk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 11.0 0.0 c 0 0 0 0 0 0 0 0 0 0 1.0 0.0 0.0 0.0 0.0 3.0 g 0 0 0 0 0 0 0 0 0 0 15.0 0.0 16.0 16.0 2.0 6.0 t 0 0 0 0 0 0 0 0 0 0 0.0 16.0 0.0 0.0 3.0 7.0