| Matrix name | Aligned logos | cor |
Ncor |
Aligned matrices |
|---|
| dyads_m21_shift5 (dyads_m21dyads_m21) |
 |
  |
  |
; dyads_m21 (dyads_m21dyads_m21); m=0 (reference); ncol1=10; shift=5; ncol=15; -----sdGGTGACwg
; Alignment reference
a 0 0 0 0 0 94 136 0 0 0 3 508 0 202 82
c 0 0 0 0 0 167 66 2 0 17 0 0 508 99 110
g 0 0 0 0 0 156 159 506 508 0 504 0 0 56 210
t 0 0 0 0 0 91 147 0 0 491 1 0 0 151 106
|
| MA0067.1_rc_shift6 (Pax2_rc) |
 |
|
|
; dyads_m21 versus MA0067.1_rc (Pax2_rc); m=1/15; ncol2=8; w=8; offset=1; strand=R; shift=6; score=0.572384; ------vmrTGAcw-
; cor=; Ncor=
a 0 0 0 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0
c 0 0 0 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0
g 0 0 0 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0
t 0 0 0 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0
|
| MA0498.2_shift8 (MEIS1) |
 |
|
|
; dyads_m21 versus MA0498.2 (MEIS1); m=2/15; ncol2=7; w=7; offset=3; strand=D; shift=8; score=0.561713; --------wTGACAg
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 23727.0 8690.0 0.0 77159.0 0.0 77159.0 17224.0
c 0 0 0 0 0 0 0 0 18797.0 5575.0 1249.0 2903.0 77159.0 0.0 14864.0
g 0 0 0 0 0 0 0 0 9714.0 3174.0 77159.0 672.0 0.0 9263.0 29965.0
t 0 0 0 0 0 0 0 0 24921.0 77159.0 0.0 0.0 1155.0 3861.0 15106.0
|
| MA0595.1_rc_shift3 (SREBF1_rc) |
 |
|
|
; dyads_m21 versus MA0595.1_rc (SREBF1_rc); m=3/15; ncol2=10; w=8; offset=-2; strand=R; shift=3; score=0.538953; ---rTGGgGTGAy--
; cor=; Ncor=
a 0 0 0 25.0 0.0 0.0 14.0 1.0 0.0 0.0 0.0 58.0 0.0 0 0
c 0 0 0 7.0 0.0 11.0 0.0 13.0 7.0 0.0 0.0 0.0 16.0 0 0
g 0 0 0 26.0 0.0 45.0 44.0 38.0 51.0 0.0 58.0 0.0 14.0 0 0
t 0 0 0 0.0 58.0 2.0 0.0 6.0 0.0 58.0 0.0 0.0 28.0 0 0
|
| MA0775.1_shift8 (MEIS3) |
 |
|
|
; dyads_m21 versus MA0775.1 (MEIS3); m=4/15; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.520844; --------wTGACAg
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 1866.0 465.0 0.0 7165.0 53.0 7165.0 1690.0
c 0 0 0 0 0 0 0 0 60.0 383.0 6.0 20.0 7165.0 8.0 1889.0
g 0 0 0 0 0 0 0 0 1788.0 260.0 7165.0 455.0 8.0 468.0 7165.0
t 0 0 0 0 0 0 0 0 3451.0 7165.0 0.0 53.0 160.0 145.0 2094.0
|
| MA0596.1_shift3 (SREBF2) |
 |
|
|
; dyads_m21 versus MA0596.1 (SREBF2); m=5/15; ncol2=10; w=8; offset=-2; strand=D; shift=3; score=0.511814; ---rTGGgGTGAy--
; cor=; Ncor=
a 0 0 0 24.0 0.0 0.0 10.0 2.0 2.0 0.0 0.0 47.0 2.0 0 0
c 0 0 0 9.0 0.0 3.0 0.0 10.0 9.0 0.0 0.0 0.0 16.0 0 0
g 0 0 0 14.0 0.0 44.0 37.0 27.0 36.0 0.0 47.0 0.0 2.0 0 0
t 0 0 0 0.0 47.0 0.0 0.0 8.0 0.0 47.0 0.0 0.0 27.0 0 0
|
| MA0117.2_shift2 (Mafb) |
 |
|
|
; dyads_m21 versus MA0117.2 (Mafb); m=6/15; ncol2=12; w=9; offset=-3; strand=D; shift=2; score=0.498189; --awwwTGCTGACd-
; cor=; Ncor=
a 0 0 1237.0 1263.0 1080.0 744.0 264.0 2.0 295.0 31.0 45.0 2182.0 182.0 582.0 0
c 0 0 174.0 121.0 216.0 398.0 618.0 14.0 2182.0 36.0 13.0 13.0 2182.0 138.0 0
g 0 0 326.0 159.0 182.0 429.0 31.0 2182.0 5.0 2.0 2182.0 17.0 490.0 646.0 0
t 0 0 446.0 639.0 704.0 611.0 2182.0 5.0 7.0 2182.0 170.0 13.0 273.0 816.0 0
|
| MA0258.2_rc_shift0 (ESR2_rc) |
 |
|
|
; dyads_m21 versus MA0258.2_rc (ESR2_rc); m=7/15; ncol2=15; w=10; offset=-5; strand=R; shift=0; score=0.487462; rGGtCasksTGACCy
; cor=; Ncor=
a 4095.0 1278.0 977.0 1518.0 66.0 5133.0 1752.0 1228.0 801.0 87.0 89.0 7033.0 41.0 644.0 174.0
c 606.0 0.0 363.0 1391.0 6658.0 533.0 2173.0 1688.0 2738.0 57.0 533.0 989.0 8143.0 7170.0 2563.0
g 2708.0 5854.0 6469.0 2056.0 398.0 975.0 2510.0 3235.0 4202.0 1.0 7621.0 147.0 0.0 0.0 96.0
t 834.0 1111.0 434.0 3278.0 1121.0 1602.0 1808.0 2092.0 502.0 8098.0 0.0 74.0 59.0 429.0 5410.0
|
| MA0774.1_shift8 (MEIS2) |
 |
|
|
; dyads_m21 versus MA0774.1 (MEIS2); m=8/15; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.485195; --------tTGACAG
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 408.0 31.0 0.0 1351.0 9.0 1351.0 83.0
c 0 0 0 0 0 0 0 0 264.0 3.0 0.0 3.0 1351.0 7.0 98.0
g 0 0 0 0 0 0 0 0 314.0 40.0 1351.0 25.0 0.0 4.0 1351.0
t 0 0 0 0 0 0 0 0 1351.0 1351.0 0.0 62.0 5.0 0.0 67.0
|
| MA1132.1_shift7 (JUN::JUNB) |
 |
|
|
; dyads_m21 versus MA1132.1 (JUN::JUNB); m=9/15; ncol2=10; w=8; offset=2; strand=D; shift=7; score=0.473536; -------kaTGACkC
; cor=; Ncor=
a 0 0 0 0 0 0 0 203.0 627.0 11.0 10.0 944.0 27.0 58.0 161.0
c 0 0 0 0 0 0 0 128.0 134.0 10.0 21.0 10.0 826.0 24.0 707.0
g 0 0 0 0 0 0 0 408.0 189.0 34.0 921.0 28.0 115.0 353.0 10.0
t 0 0 0 0 0 0 0 261.0 50.0 946.0 47.0 18.0 33.0 565.0 122.0
|
| MA0513.1_rc_shift6 (SMAD2::SMAD3::SMAD4_rc) |
 |
|
|
; dyads_m21 versus MA0513.1_rc (SMAD2::SMAD3::SMAD4_rc); m=10/15; ncol2=13; w=9; offset=1; strand=R; shift=6; score=0.47072; ------agGTGmsAG
; cor=; Ncor=
a 0 0 0 0 0 0 540.0 152.0 0.0 97.0 0.0 283.0 23.0 899.0 0.0
c 0 0 0 0 0 0 35.0 47.0 133.0 18.0 3.0 280.0 539.0 0.0 0.0
g 0 0 0 0 0 0 214.0 583.0 736.0 19.0 896.0 125.0 231.0 0.0 899.0
t 0 0 0 0 0 0 110.0 117.0 30.0 765.0 0.0 211.0 106.0 0.0 0.0
|
| MA0160.1_rc_shift8 (NR4A2_rc) |
 |
|
|
; dyads_m21 versus MA0160.1_rc (NR4A2_rc); m=11/15; ncol2=8; w=7; offset=3; strand=R; shift=8; score=0.467687; --------gTGACCT
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 0.0 0.0 1.0 10.0 0.0 1.0 0.0
c 0 0 0 0 0 0 0 0 2.0 0.0 0.0 0.0 11.0 13.0 1.0
g 0 0 0 0 0 0 0 0 8.0 0.0 13.0 2.0 0.0 0.0 0.0
t 0 0 0 0 0 0 0 0 3.0 14.0 0.0 2.0 3.0 0.0 13.0
|
| MA0842.2_shift1 (NRL) |
 |
|
|
; dyads_m21 versus MA0842.2 (NRL); m=12/15; ncol2=13; w=9; offset=-4; strand=D; shift=1; score=0.455142; -aawwrTGCTGACg-
; cor=; Ncor=
a 0 14408.0 21189.0 17467.0 14033.0 6835.0 581.0 1.0 1008.0 0.0 73.0 27228.0 47.0 6001.0 0
c 0 3102.0 838.0 319.0 1314.0 5669.0 2768.0 0.0 27228.0 8.0 0.0 0.0 27228.0 1669.0 0
g 0 5588.0 3685.0 635.0 822.0 7983.0 68.0 27228.0 22.0 0.0 27228.0 4.0 559.0 14528.0 0
t 0 4130.0 6039.0 9761.0 13194.0 6741.0 27228.0 0.0 14.0 27228.0 1036.0 0.0 2394.0 5030.0 0
|
| MA0604.1_shift8 (Atf1) |
 |
|
|
; dyads_m21 versus MA0604.1 (Atf1); m=13/15; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.453859; --------rTGACGT
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 462.0 24.0 0.0 1000.0 0.0 7.0 90.0
c 0 0 0 0 0 0 0 0 86.0 16.0 22.0 0.0 1000.0 0.0 198.0
g 0 0 0 0 0 0 0 0 387.0 0.0 803.0 0.0 0.0 993.0 0.0
t 0 0 0 0 0 0 0 0 65.0 960.0 175.0 0.0 0.0 0.0 712.0
|
| MA1535.1_rc_shift8 (NR2C1_rc) |
 |
|
|
; dyads_m21 versus MA1535.1_rc (NR2C1_rc); m=14/15; ncol2=9; w=7; offset=3; strand=R; shift=8; score=0.434223; --------rTGACCy
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 2499.0 0.0 0.0 9622.0 0.0 297.0 55.0
c 0 0 0 0 0 0 0 0 2039.0 1716.0 321.0 271.0 9622.0 9622.0 4756.0
g 0 0 0 0 0 0 0 0 2786.0 0.0 9622.0 0.0 0.0 0.0 227.0
t 0 0 0 0 0 0 0 0 2298.0 9622.0 0.0 0.0 0.0 0.0 4866.0
|
| MA1143.1_shift8 (FOSL1::JUND(var.2)) |
 |
|
|
; dyads_m21 versus MA1143.1 (FOSL1::JUND(var.2)); m=15/15; ncol2=10; w=7; offset=3; strand=D; shift=8; score=0.408493; --------rTGACgy
; cor=; Ncor=
a 0 0 0 0 0 0 0 0 561.0 36.0 39.0 870.0 32.0 116.0 117.0
c 0 0 0 0 0 0 0 0 75.0 50.0 101.0 45.0 835.0 59.0 262.0
g 0 0 0 0 0 0 0 0 324.0 44.0 777.0 41.0 64.0 649.0 39.0
t 0 0 0 0 0 0 0 0 40.0 870.0 82.0 44.0 68.0 176.0 582.0
|