One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m26/peak-motifs_dyads_m26.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m26/peak-motifs_dyads_m26_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: dyads_m26_shift3 ; 35 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
dyads_m26_shift3 (dyads_m26dyads_m26)     
; dyads_m26 (dyads_m26dyads_m26); m=0 (reference); ncol1=10; shift=3; ncol=16; ---scCACACChs---
; Alignment reference
a	0	0	0	107	153	0	672	0	672	0	0	174	138	0	0	0
c	0	0	0	238	261	672	0	672	0	672	672	261	186	0	0	0
g	0	0	0	198	124	0	0	0	0	0	0	43	227	0	0	0
t	0	0	0	129	134	0	0	0	0	0	0	194	121	0	0	0
MA1566.1_rc_shift3 (TBX3_rc) 
; dyads_m26 versus MA1566.1_rc (TBX3_rc); m=1/34; ncol2=10; w=10; offset=0; strand=R; shift=3; score=0.869181; ---ttsACACcty---
; cor=; Ncor=
a	0	0	0	578.0	484.0	1112.0	2544.0	0.0	2544.0	0.0	302.0	760.0	497.0	0	0	0
c	0	0	0	620.0	947.0	2544.0	155.0	2544.0	0.0	2544.0	2544.0	1207.0	1003.0	0	0	0
g	0	0	0	586.0	410.0	1471.0	634.0	0.0	735.0	45.0	862.0	481.0	399.0	0	0	0
t	0	0	0	760.0	2544.0	170.0	115.0	0.0	16.0	6.0	427.0	2544.0	644.0	0	0	0
MA1567.1_rc_shift3 (TBX6_rc) 
; dyads_m26 versus MA1567.1_rc (TBX6_rc); m=2/34; ncol2=10; w=10; offset=0; strand=R; shift=3; score=0.834262; ---tTmACACcty---
; cor=; Ncor=
a	0	0	0	2330.0	713.0	5964.0	11087.0	12.0	11087.0	0.0	1058.0	2157.0	2456.0	0	0	0
c	0	0	0	2141.0	2251.0	11087.0	320.0	11087.0	0.0	11087.0	11087.0	3347.0	4003.0	0	0	0
g	0	0	0	2066.0	652.0	4876.0	3053.0	0.0	1002.0	63.0	2913.0	1173.0	1630.0	0	0	0
t	0	0	0	4550.0	11087.0	1430.0	552.0	14.0	44.0	58.0	1882.0	11087.0	2998.0	0	0	0
MA1511.1_shift3 (KLF10) 
; dyads_m26 versus MA1511.1 (KLF10); m=3/34; ncol2=11; w=10; offset=0; strand=D; shift=3; score=0.806462; ---gmCACrCCCmy--
; cor=; Ncor=
a	0	0	0	4746.0	6633.0	633.0	18751.0	238.0	13506.0	1.0	0.0	0.0	7545.0	934.0	0	0
c	0	0	0	2435.0	12654.0	19619.0	1663.0	19907.0	11.0	19995.0	19994.0	19244.0	11403.0	13118.0	0	0
g	0	0	0	14086.0	1299.0	98.0	1723.0	3.0	6234.0	2.0	0.0	0.0	587.0	770.0	0	0
t	0	0	0	1251.0	1373.0	485.0	6.0	157.0	543.0	0.0	0.0	2198.0	2686.0	6274.0	0	0
MA0690.1_rc_shift3 (TBX21_rc) 
; dyads_m26 versus MA0690.1_rc (TBX21_rc); m=4/34; ncol2=10; w=10; offset=0; strand=R; shift=3; score=0.791893; ---TTCACACCTt---
; cor=; Ncor=
a	0	0	0	1287.0	0.0	364.0	4395.0	2.0	4395.0	33.0	398.0	146.0	872.0	0	0	0
c	0	0	0	317.0	38.0	4395.0	34.0	4395.0	16.0	4395.0	4395.0	359.0	937.0	0	0	0
g	0	0	0	441.0	0.0	126.0	331.0	0.0	180.0	17.0	239.0	30.0	263.0	0	0	0
t	0	0	0	4395.0	4395.0	80.0	185.0	1.0	6.0	2.0	612.0	4395.0	2322.0	0	0	0
MA0493.1_shift2 (Klf1) 
; dyads_m26 versus MA0493.1 (Klf1); m=5/34; ncol2=11; w=10; offset=-1; strand=D; shift=2; score=0.776907; --rrCCACACCCw---
; cor=; Ncor=
a	0	0	150.0	167.0	67.0	13.0	404.0	0.0	400.0	0.0	0.0	0.0	280.0	0	0	0
c	0	0	76.0	40.0	396.0	461.0	118.0	526.0	0.0	526.0	526.0	508.0	35.0	0	0	0
g	0	0	202.0	305.0	32.0	0.0	0.0	0.0	97.0	0.0	0.0	0.0	0.0	0	0	0
t	0	0	98.0	14.0	31.0	52.0	4.0	0.0	29.0	0.0	0.0	18.0	211.0	0	0	0
MA0689.1_rc_shift2 (TBX20_rc) 
; dyads_m26 versus MA0689.1_rc (TBX20_rc); m=6/34; ncol2=11; w=10; offset=-1; strand=R; shift=2; score=0.725561; --yTTCACACCTw---
; cor=; Ncor=
a	0	0	59.0	170.0	10.0	82.0	572.0	4.0	572.0	40.0	26.0	24.0	250.0	0	0	0
c	0	0	300.0	53.0	6.0	572.0	11.0	572.0	10.0	572.0	572.0	54.0	121.0	0	0	0
g	0	0	60.0	16.0	1.0	10.0	1.0	1.0	0.0	0.0	34.0	23.0	4.0	0	0	0
t	0	0	154.0	572.0	572.0	48.0	8.0	0.0	0.0	0.0	50.0	572.0	197.0	0	0	0
MA1517.1_shift2 (KLF6) 
; dyads_m26 versus MA1517.1 (KLF6); m=7/34; ncol2=11; w=10; offset=-1; strand=D; shift=2; score=0.718161; --srcCACRCCCm---
; cor=; Ncor=
a	0	0	443.0	1035.0	569.0	432.0	2192.0	0.0	1024.0	0.0	25.0	71.0	955.0	0	0	0
c	0	0	624.0	490.0	2192.0	2192.0	284.0	2192.0	0.0	2192.0	2192.0	2192.0	665.0	0	0	0
g	0	0	626.0	1157.0	332.0	298.0	60.0	0.0	2192.0	0.0	60.0	12.0	52.0	0	0	0
t	0	0	499.0	136.0	219.0	140.0	60.0	24.0	0.0	0.0	0.0	64.0	520.0	0	0	0
MA1512.1_shift3 (KLF11) 
; dyads_m26 versus MA1512.1 (KLF11); m=8/34; ncol2=11; w=10; offset=0; strand=D; shift=3; score=0.717199; ---gcCACGCCCmC--
; cor=; Ncor=
a	0	0	0	1882.0	2022.0	650.0	8655.0	0.0	2426.0	11.0	1.0	0.0	4689.0	581.0	0	0
c	0	0	0	2054.0	5549.0	8662.0	1289.0	9142.0	52.0	9161.0	9166.0	8941.0	4226.0	8403.0	0	0
g	0	0	0	3930.0	401.0	156.0	115.0	0.0	8291.0	18.0	20.0	4.0	69.0	358.0	0	0
t	0	0	0	1299.0	1192.0	506.0	27.0	38.0	349.0	23.0	7.0	885.0	761.0	1281.0	0	0
MA1515.1_shift2 (KLF2) 
; dyads_m26 versus MA1515.1 (KLF2); m=9/34; ncol2=11; w=10; offset=-1; strand=D; shift=2; score=0.714686; --srCCmCrCCCw---
; cor=; Ncor=
a	0	0	1054.0	2510.0	741.0	403.0	4622.0	0.0	1702.0	0.0	128.0	68.0	1838.0	0	0	0
c	0	0	1376.0	1103.0	4622.0	4622.0	2265.0	4622.0	274.0	4622.0	4622.0	4622.0	1142.0	0	0	0
g	0	0	1320.0	2112.0	495.0	186.0	1060.0	0.0	2920.0	49.0	195.0	105.0	389.0	0	0	0
t	0	0	872.0	433.0	346.0	312.0	214.0	78.0	167.0	22.0	9.0	444.0	1253.0	0	0	0
MA0688.1_rc_shift2 (TBX2_rc) 
; dyads_m26 versus MA0688.1_rc (TBX2_rc); m=10/34; ncol2=11; w=10; offset=-1; strand=R; shift=2; score=0.712652; --ttTcACACCTw---
; cor=; Ncor=
a	0	0	667.0	656.0	120.0	1409.0	3181.0	12.0	3181.0	14.0	353.0	442.0	804.0	0	0	0
c	0	0	590.0	527.0	125.0	3181.0	27.0	3181.0	21.0	3181.0	3181.0	716.0	717.0	0	0	0
g	0	0	446.0	491.0	26.0	1289.0	392.0	0.0	329.0	36.0	519.0	59.0	402.0	0	0	0
t	0	0	1477.0	2525.0	3181.0	310.0	307.0	26.0	0.0	9.0	602.0	3181.0	1258.0	0	0	0
MA0599.1_shift3 (KLF5) 
; dyads_m26 versus MA0599.1 (KLF5); m=11/34; ncol2=10; w=10; offset=0; strand=D; shift=3; score=0.70358; ---gCCMCrCCCh---
; cor=; Ncor=
a	0	0	0	1429.0	0.0	0.0	3477.0	0.0	5051.0	0.0	0.0	0.0	3915.0	0	0	0
c	0	0	0	2023.0	11900.0	12008.0	9569.0	13611.0	0.0	13611.0	13611.0	13135.0	5595.0	0	0	0
g	0	0	0	7572.0	0.0	0.0	0.0	0.0	5182.0	0.0	0.0	0.0	0.0	0	0	0
t	0	0	0	2587.0	1711.0	1603.0	565.0	0.0	3378.0	0.0	0.0	476.0	4101.0	0	0	0
MA0741.1_shift3 (KLF16) 
; dyads_m26 versus MA0741.1 (KLF16); m=12/34; ncol2=11; w=10; offset=0; strand=D; shift=3; score=0.692816; ---gmCMCgCCCMC--
; cor=; Ncor=
a	0	0	0	666.0	901.0	62.0	1150.0	66.0	497.0	8.0	2.0	16.0	437.0	32.0	0	0
c	0	0	0	535.0	1612.0	1612.0	461.0	1612.0	173.0	1612.0	1612.0	1612.0	1175.0	1612.0	0	0
g	0	0	0	1612.0	77.0	6.0	32.0	17.0	1612.0	0.0	8.0	3.0	19.0	23.0	0	0
t	0	0	0	240.0	116.0	45.0	0.0	19.0	403.0	0.0	0.0	97.0	40.0	370.0	0	0
MA0807.1_rc_shift4 (TBX5_rc) 
; dyads_m26 versus MA0807.1_rc (TBX5_rc); m=13/34; ncol2=8; w=8; offset=1; strand=R; shift=4; score=0.691028; ----TmACACCT----
; cor=; Ncor=
a	0	0	0	0	283.0	915.0	1804.0	0.0	1804.0	28.0	133.0	207.0	0	0	0	0
c	0	0	0	0	343.0	1804.0	201.0	1804.0	166.0	1804.0	1804.0	409.0	0	0	0	0
g	0	0	0	0	76.0	616.0	225.0	0.0	131.0	0.0	190.0	89.0	0	0	0	0
t	0	0	0	0	1804.0	126.0	162.0	27.0	45.0	0.0	235.0	1804.0	0	0	0	0
MA0801.1_rc_shift4 (MGA_rc) 
; dyads_m26 versus MA0801.1_rc (MGA_rc); m=14/34; ncol2=8; w=8; offset=1; strand=R; shift=4; score=0.689546; ----TCACACCT----
; cor=; Ncor=
a	0	0	0	0	274.0	6465.0	30489.0	11.0	30489.0	104.0	1929.0	4160.0	0	0	0	0
c	0	0	0	0	920.0	30489.0	381.0	30489.0	96.0	30489.0	30489.0	8873.0	0	0	0	0
g	0	0	0	0	110.0	1753.0	3089.0	1.0	3534.0	509.0	3737.0	1151.0	0	0	0	0
t	0	0	0	0	30489.0	689.0	1042.0	14.0	12.0	16.0	4310.0	30489.0	0	0	0	0
MA0803.1_rc_shift4 (TBX15_rc) 
; dyads_m26 versus MA0803.1_rc (TBX15_rc); m=15/34; ncol2=8; w=8; offset=1; strand=R; shift=4; score=0.686823; ----TCACACCT----
; cor=; Ncor=
a	0	0	0	0	96.0	937.0	10502.0	0.0	10502.0	0.0	103.0	112.0	0	0	0	0
c	0	0	0	0	306.0	10502.0	324.0	10502.0	245.0	10502.0	10502.0	664.0	0	0	0	0
g	0	0	0	0	71.0	454.0	435.0	8.0	175.0	7.0	101.0	74.0	0	0	0	0
t	0	0	0	0	10502.0	44.0	140.0	0.0	61.0	19.0	458.0	10502.0	0	0	0	0
MA0805.1_rc_shift4 (TBX1_rc) 
; dyads_m26 versus MA0805.1_rc (TBX1_rc); m=16/34; ncol2=8; w=8; offset=1; strand=R; shift=4; score=0.679117; ----TCACACCT----
; cor=; Ncor=
a	0	0	0	0	0.0	1039.0	11931.0	0.0	11931.0	0.0	669.0	564.0	0	0	0	0
c	0	0	0	0	18.0	11931.0	109.0	11931.0	141.0	11931.0	11931.0	1007.0	0	0	0	0
g	0	0	0	0	33.0	720.0	613.0	5.0	214.0	0.0	711.0	113.0	0	0	0	0
t	0	0	0	0	11931.0	141.0	142.0	0.0	28.0	0.0	1560.0	11931.0	0	0	0	0
MA1565.1_rc_shift2 (TBX18_rc) 
; dyads_m26 versus MA1565.1_rc (TBX18_rc); m=17/34; ncol2=12; w=10; offset=-1; strand=R; shift=2; score=0.672011; --ytTCACACCTyy--
; cor=; Ncor=
a	0	0	90.0	95.0	34.0	32.0	778.0	2.0	778.0	0.0	47.0	59.0	148.0	160.0	0	0
c	0	0	246.0	265.0	5.0	778.0	109.0	778.0	0.0	778.0	778.0	159.0	435.0	316.0	0	0
g	0	0	137.0	62.0	1.0	161.0	98.0	6.0	80.0	0.0	57.0	62.0	103.0	86.0	0	0
t	0	0	305.0	778.0	778.0	52.0	100.0	21.0	7.0	14.0	73.0	778.0	343.0	216.0	0	0
MA0806.1_rc_shift4 (TBX4_rc) 
; dyads_m26 versus MA0806.1_rc (TBX4_rc); m=18/34; ncol2=8; w=8; offset=1; strand=R; shift=4; score=0.665595; ----TcACACCT----
; cor=; Ncor=
a	0	0	0	0	965.0	8384.0	18646.0	0.0	18646.0	33.0	1162.0	1283.0	0	0	0	0
c	0	0	0	0	1733.0	18646.0	304.0	18646.0	191.0	18646.0	18646.0	2353.0	0	0	0	0
g	0	0	0	0	588.0	5396.0	2859.0	0.0	1644.0	189.0	2328.0	437.0	0	0	0	0
t	0	0	0	0	18646.0	1355.0	1551.0	0.0	0.0	38.0	3082.0	18646.0	0	0	0	0
MA0802.1_rc_shift2 (TBR1_rc) 
; dyads_m26 versus MA0802.1_rc (TBR1_rc); m=19/34; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.641773; --tTTCACACCT----
; cor=; Ncor=
a	0	0	5846.0	4576.0	205.0	7001.0	34509.0	4.0	34509.0	213.0	4480.0	1433.0	0	0	0	0
c	0	0	4537.0	1488.0	584.0	34509.0	157.0	34509.0	88.0	34509.0	34509.0	3329.0	0	0	0	0
g	0	0	5619.0	2575.0	90.0	2551.0	4742.0	6.0	1759.0	254.0	3255.0	359.0	0	0	0	0
t	0	0	18507.0	25869.0	34509.0	1175.0	2386.0	0.0	39.0	70.0	6880.0	34509.0	0	0	0	0
MA0039.4_shift2 (KLF4) 
; dyads_m26 versus MA0039.4 (KLF4); m=20/34; ncol2=12; w=10; offset=-1; strand=D; shift=2; score=0.618148; --ssCCCCACCChs--
; cor=; Ncor=
a	0	0	12570.0	11487.0	2465.0	2105.0	7021.0	1173.0	45602.0	852.0	1617.0	1202.0	16264.0	9959.0	0	0
c	0	0	17520.0	14038.0	49209.0	47865.0	45405.0	52875.0	161.0	52366.0	51112.0	51045.0	18249.0	19217.0	0	0
g	0	0	14243.0	18473.0	1583.0	1214.0	1422.0	793.0	6598.0	1470.0	1870.0	1005.0	6292.0	14422.0	0	0
t	0	0	11484.0	11819.0	2560.0	4633.0	1969.0	976.0	3456.0	1129.0	1218.0	2565.0	15012.0	12219.0	0	0
MA0747.1_shift3 (SP8) 
; dyads_m26 versus MA0747.1 (SP8); m=21/34; ncol2=12; w=10; offset=0; strand=D; shift=3; score=0.617648; ---rmCACgCCCmCy-
; cor=; Ncor=
a	0	0	0	52.0	54.0	25.0	133.0	7.0	25.0	5.0	2.0	0.0	90.0	13.0	31.0	0
c	0	0	0	27.0	113.0	167.0	33.0	167.0	37.0	167.0	167.0	167.0	77.0	167.0	52.0	0
g	0	0	0	78.0	0.0	0.0	1.0	1.0	167.0	6.0	3.0	4.0	6.0	21.0	1.0	0
t	0	0	0	10.0	4.0	13.0	2.0	5.0	39.0	2.0	0.0	15.0	3.0	39.0	82.0	0
MA0800.1_rc_shift0 (EOMES_rc) 
; dyads_m26 versus MA0800.1_rc (EOMES_rc); m=22/34; ncol2=13; w=10; offset=-3; strand=R; shift=0; score=0.613024; dwttTCACACCTt---
; cor=; Ncor=
a	2800.0	4183.0	3781.0	3351.0	24.0	980.0	9832.0	3.0	9832.0	94.0	1305.0	653.0	2122.0	0	0	0
c	1954.0	1966.0	2941.0	1022.0	99.0	9832.0	98.0	9832.0	50.0	9832.0	9832.0	1259.0	2274.0	0	0	0
g	2577.0	1960.0	4337.0	1956.0	28.0	550.0	1540.0	8.0	600.0	92.0	1004.0	158.0	911.0	0	0	0
t	2501.0	5649.0	9832.0	9832.0	9832.0	210.0	495.0	9.0	19.0	23.0	1775.0	9832.0	4526.0	0	0	0
MA1564.1_shift3 (SP9) 
; dyads_m26 versus MA1564.1 (SP9); m=23/34; ncol2=12; w=10; offset=0; strand=D; shift=3; score=0.601142; ---rcCmCGCCCmcy-
; cor=; Ncor=
a	0	0	0	834.0	566.0	321.0	2451.0	2.0	211.0	22.0	0.0	39.0	1192.0	188.0	420.0	0
c	0	0	0	440.0	2451.0	2451.0	1127.0	2451.0	200.0	2451.0	2451.0	2451.0	1259.0	1863.0	1167.0	0
g	0	0	0	952.0	309.0	113.0	56.0	17.0	2451.0	0.0	0.0	24.0	38.0	191.0	204.0	0
t	0	0	0	226.0	518.0	284.0	96.0	9.0	173.0	14.0	30.0	412.0	353.0	588.0	660.0	0
MA0746.2_shift2 (SP3) 
; dyads_m26 versus MA0746.2 (SP3); m=24/34; ncol2=13; w=10; offset=-1; strand=D; shift=2; score=0.551408; --srCCACGCCCmCy-
; cor=; Ncor=
a	0	0	1267.0	2146.0	664.0	160.0	5253.0	6.0	465.0	0.0	0.0	2.0	3430.0	556.0	1516.0	0
c	0	0	1884.0	531.0	6591.0	6591.0	1338.0	6591.0	0.0	6591.0	6591.0	6591.0	3160.0	5116.0	2608.0	0
g	0	0	1895.0	4445.0	226.0	54.0	2.0	0.0	6591.0	0.0	0.0	2.0	39.0	297.0	524.0	0
t	0	0	1545.0	421.0	345.0	202.0	11.0	12.0	504.0	0.0	9.0	718.0	552.0	1475.0	1943.0	0
MA1621.1_shift3 (Rbpjl) 
; dyads_m26 versus MA1621.1 (Rbpjl); m=25/34; ncol2=14; w=10; offset=0; strand=D; shift=3; score=0.544913; ---svmaCACCTGtsy
; cor=; Ncor=
a	0	0	0	2006.0	2466.0	3369.0	6005.0	139.0	9386.0	84.0	234.0	63.0	102.0	569.0	1539.0	2273.0
c	0	0	0	2881.0	2427.0	3117.0	1373.0	9273.0	70.0	8533.0	9005.0	144.0	131.0	1718.0	3247.0	2884.0
g	0	0	0	2476.0	2549.0	1802.0	1492.0	103.0	110.0	672.0	317.0	132.0	9295.0	1581.0	2687.0	1958.0
t	0	0	0	2289.0	2210.0	1364.0	782.0	137.0	86.0	363.0	96.0	9313.0	124.0	5784.0	2179.0	2537.0
MA1107.2_shift1 (KLF9) 
; dyads_m26 versus MA1107.2 (KLF9); m=26/34; ncol2=16; w=10; offset=-2; strand=D; shift=1; score=0.536519; -crgCCACACCCAChy
; cor=; Ncor=
a	0	5359.0	8015.0	2862.0	4664.0	287.0	21899.0	221.0	19187.0	224.0	2428.0	146.0	18837.0	792.0	6948.0	4110.0
c	0	10412.0	5108.0	4342.0	17839.0	24709.0	2559.0	24863.0	1070.0	24365.0	22117.0	24682.0	4339.0	20644.0	8797.0	10520.0
g	0	5200.0	7779.0	16852.0	1660.0	291.0	708.0	353.0	4340.0	735.0	605.0	205.0	852.0	1778.0	3289.0	4423.0
t	0	4608.0	4677.0	1523.0	1416.0	292.0	413.0	142.0	982.0	255.0	429.0	546.0	1551.0	2365.0	6545.0	6526.0
MA1620.1_shift4 (Ptf1a(var.3)) 
; dyads_m26 versus MA1620.1 (Ptf1a(var.3)); m=27/34; ncol2=12; w=9; offset=1; strand=D; shift=4; score=0.534089; ----rmaCACCTGtky
; cor=; Ncor=
a	0	0	0	0	2834.0	2613.0	6867.0	184.0	10033.0	116.0	256.0	85.0	68.0	527.0	1678.0	2293.0
c	0	0	0	0	2469.0	3700.0	1188.0	9887.0	60.0	8567.0	9612.0	94.0	109.0	1615.0	2527.0	3004.0
g	0	0	0	0	2664.0	2379.0	1410.0	113.0	84.0	1182.0	294.0	98.0	9972.0	1516.0	3341.0	2183.0
t	0	0	0	0	2324.0	1599.0	826.0	107.0	114.0	426.0	129.0	10014.0	142.0	6633.0	2745.0	2811.0
MA0740.1_shift2 (KLF14) 
; dyads_m26 versus MA0740.1 (KLF14); m=28/34; ncol2=14; w=10; offset=-1; strand=D; shift=2; score=0.500055; --krcCACGCCCmYyt
; cor=; Ncor=
a	0	0	430.0	1205.0	526.0	0.0	1708.0	2.0	69.0	0.0	0.0	0.0	716.0	32.0	280.0	649.0
c	0	0	215.0	73.0	1360.0	1599.0	136.0	1596.0	36.0	1602.0	1604.0	1609.0	961.0	1463.0	594.0	741.0
g	0	0	966.0	2280.0	96.0	10.0	58.0	0.0	2939.0	3.0	3.0	4.0	1.0	15.0	89.0	314.0
t	0	0	693.0	71.0	404.0	248.0	5.0	2.0	31.0	0.0	6.0	65.0	31.0	559.0	1041.0	1670.0
MA0742.1_shift2 (Klf12) 
; dyads_m26 versus MA0742.1 (Klf12); m=29/34; ncol2=15; w=10; offset=-1; strand=D; shift=2; score=0.479042; --GrCCACGCCCwtht
; cor=; Ncor=
a	0	0	167.0	553.0	19.0	5.0	853.0	9.0	215.0	0.0	0.0	0.0	410.0	238.0	308.0	238.0
c	0	0	35.0	11.0	668.0	670.0	27.0	675.0	1.0	687.0	706.0	715.0	120.0	219.0	239.0	186.0
g	0	0	1158.0	531.0	8.0	12.0	2.0	0.0	1348.0	0.0	9.0	0.0	0.0	99.0	84.0	117.0
t	0	0	225.0	0.0	9.0	3.0	0.0	4.0	16.0	4.0	13.0	13.0	483.0	403.0	290.0	429.0
MA1558.1_rc_shift5 (SNAI1_rc) 
; dyads_m26 versus MA1558.1_rc (SNAI1_rc); m=30/34; ncol2=10; w=8; offset=2; strand=R; shift=5; score=0.478194; -----yrCACCTGyh-
; cor=; Ncor=
a	0	0	0	0	0	6356.0	9044.0	311.0	19982.0	28.0	306.0	568.0	340.0	3518.0	5112.0	0
c	0	0	0	0	0	9894.0	5306.0	19982.0	42.0	19982.0	19982.0	91.0	275.0	12989.0	6410.0	0
g	0	0	0	0	0	4592.0	10938.0	0.0	0.0	5.0	517.0	297.0	19982.0	501.0	3187.0	0
t	0	0	0	0	0	10088.0	1639.0	706.0	38.0	72.0	1766.0	19982.0	446.0	6993.0	5274.0	0
MA1155.1_shift3 (ZSCAN4) 
; dyads_m26 versus MA1155.1 (ZSCAN4); m=31/34; ncol2=15; w=10; offset=0; strand=D; shift=3; score=0.471533; ---tGCACACmCTGaA
; cor=; Ncor=
a	0	0	0	257.0	290.0	0.0	1292.0	0.0	1281.0	3.0	772.0	7.0	8.0	3.0	1118.0	1225.0
c	0	0	0	383.0	2.0	1676.0	0.0	1665.0	0.0	1702.0	374.0	1684.0	11.0	50.0	107.0	279.0
g	0	0	0	112.0	1737.0	1.0	0.0	0.0	2.0	0.0	320.0	0.0	75.0	1873.0	230.0	0.0
t	0	0	0	1373.0	0.0	0.0	2.0	0.0	2.0	73.0	8.0	2.0	1699.0	218.0	362.0	6.0
MA0103.3_shift5 (ZEB1) 
; dyads_m26 versus MA0103.3 (ZEB1); m=32/34; ncol2=11; w=8; offset=2; strand=D; shift=5; score=0.442718; -----ssCACCTGsss
; cor=; Ncor=
a	0	0	0	0	0	3211.0	4685.0	114.0	19905.0	32.0	193.0	4.0	441.0	1982.0	4258.0	3490.0
c	0	0	0	0	0	7998.0	5550.0	19195.0	0.0	19878.0	19257.0	501.0	178.0	9561.0	6117.0	6955.0
g	0	0	0	0	0	5228.0	5179.0	158.0	223.0	97.0	649.0	355.0	19381.0	5178.0	6601.0	5828.0
t	0	0	0	0	0	3692.0	4715.0	662.0	1.0	122.0	30.0	19269.0	129.0	3408.0	3153.0	3856.0
MA0522.3_shift5 (TCF3) 
; dyads_m26 versus MA0522.3 (TCF3); m=33/34; ncol2=11; w=8; offset=2; strand=D; shift=5; score=0.438108; -----svCACCTGCss
; cor=; Ncor=
a	0	0	0	0	0	6270.0	8032.0	469.0	28916.0	309.0	1127.0	380.0	1089.0	295.0	7276.0	5485.0
c	0	0	0	0	0	10212.0	9269.0	29379.0	396.0	28640.0	27199.0	2003.0	1038.0	28742.0	8727.0	10122.0
g	0	0	0	0	0	8539.0	9432.0	708.0	1574.0	1362.0	2652.0	1339.0	28642.0	987.0	8025.0	9222.0
t	0	0	0	0	0	6240.0	4528.0	705.0	375.0	950.0	283.0	27539.0	492.0	1237.0	7233.0	6432.0
MA1648.1_shift5 (TCF12(var.2)) 
; dyads_m26 versus MA1648.1 (TCF12(var.2)); m=34/34; ncol2=11; w=8; offset=2; strand=D; shift=5; score=0.432873; -----ssCACCTGCys
; cor=; Ncor=
a	0	0	0	0	0	13014.0	14835.0	955.0	52529.0	744.0	1913.0	1380.0	2819.0	1089.0	13867.0	11414.0
c	0	0	0	0	0	19393.0	17594.0	57848.0	2007.0	55598.0	55765.0	3886.0	2088.0	55061.0	17603.0	18154.0
g	0	0	0	0	0	16996.0	18560.0	1186.0	5607.0	3780.0	3536.0	2625.0	55922.0	2314.0	14293.0	20060.0
t	0	0	0	0	0	12473.0	10887.0	1887.0	1733.0	1754.0	662.0	53985.0	1047.0	3412.0	16113.0	12248.0