One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m32/peak-motifs_dyads_m32.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m32/peak-motifs_dyads_m32_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: dyads_m32_shift3 ; 36 matrices ; sort_field=Ncor

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m32_shift3 (dyads_m32dyads_m32)				; dyads_m32 (dyads_m32dyads_m32); m=0 (reference); ncol1=14; shift=3; ncol=17; ---rsAACAGsTGCTss ; Alignment reference a 0 0 0 82 63 282 280 0 316 1 5 1 0 3 30 53 53 c 0 0 0 60 110 12 3 317 0 3 118 0 0 282 19 86 98 g 0 0 0 127 109 22 34 0 0 311 184 1 317 16 9 123 92 t 0 0 0 48 35 1 0 0 1 2 10 315 0 16 259 55 74
MA0499.2_rc_shift3 (MYOD1_rc)				; dyads_m32 versus MA0499.2_rc (MYOD1_rc); m=1/35; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.828106; ---rkrACAGGTGcwg- ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0 0
MA0832.1_shift3 (Tcf21)				; dyads_m32 versus MA0832.1 (Tcf21); m=2/35; ncol2=14; w=14; offset=0; strand=D; shift=3; score=0.820634; ---ryAACAGCTGTTry ; cor=; Ncor= a 0 0 0 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 30.0 c 0 0 0 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 49.0 g 0 0 0 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 32.0 t 0 0 0 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0 60.0
MA1621.1_rc_shift3 (Rbpjl_rc)				; dyads_m32 versus MA1621.1_rc (Rbpjl_rc); m=3/35; ncol2=14; w=14; offset=0; strand=R; shift=3; score=0.800779; ---grsaCAGGTGtkbs ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 2289.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 2476.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 2881.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0 2006.0
MA0745.2_rc_shift3 (SNAI2_rc)				; dyads_m32 versus MA0745.2_rc (SNAI2_rc); m=4/35; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.779551; ---rykACAGGTGcrt- ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0 0
MA0830.2_rc_shift3 (TCF4_rc)				; dyads_m32 versus MA0830.2_rc (TCF4_rc); m=5/35; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.728885; ---ssggCAGGTGccg- ; cor=; Ncor= a 0 0 0 6827.0 6430.0 6126.0 3555.0 242.0 27398.0 188.0 751.0 512.0 215.0 1737.0 7059.0 6225.0 0 c 0 0 0 7662.0 7964.0 4933.0 5281.0 28432.0 679.0 1197.0 1733.0 1295.0 321.0 18498.0 8618.0 7140.0 0 g 0 0 0 9843.0 8658.0 12872.0 18935.0 540.0 1016.0 27724.0 26765.0 635.0 28686.0 5062.0 6754.0 10052.0 0 t 0 0 0 5133.0 6413.0 5534.0 1694.0 251.0 372.0 356.0 216.0 27023.0 243.0 4168.0 7034.0 6048.0 0
MA1485.1_rc_shift3 (FERD3L_rc)				; dyads_m32 versus MA1485.1_rc (FERD3L_rc); m=6/35; ncol2=14; w=14; offset=0; strand=R; shift=3; score=0.710486; ---GTrACAGCTGkyrC ; cor=; Ncor= a 0 0 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 225.0 c 0 0 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 29605.0 g 0 0 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 68.0 t 0 0 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0 2158.0
MA1631.1_rc_shift3 (ASCL1(var.2)_rc)				; dyads_m32 versus MA1631.1_rc (ASCL1(var.2)_rc); m=7/35; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.710171; ---gsrGCAGGTGchg- ; cor=; Ncor= a 0 0 0 8032.0 7779.0 9017.0 2394.0 249.0 32756.0 151.0 815.0 618.0 289.0 3290.0 8805.0 7347.0 0 c 0 0 0 8356.0 8939.0 2966.0 2719.0 33411.0 492.0 607.0 3209.0 860.0 321.0 18576.0 8601.0 8371.0 0 g 0 0 0 11996.0 10555.0 17883.0 28844.0 445.0 740.0 33402.0 30169.0 563.0 33562.0 6654.0 7998.0 11805.0 0 t 0 0 0 5972.0 7083.0 4490.0 399.0 251.0 368.0 196.0 163.0 32315.0 184.0 5836.0 8952.0 6833.0 0
MA1618.1_shift4 (Ptf1a)				; dyads_m32 versus MA1618.1 (Ptf1a); m=8/35; ncol2=13; w=13; offset=1; strand=D; shift=4; score=0.697112; ----dmaCAGATGttkh ; cor=; Ncor= a 0 0 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 3754.0 c 0 0 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 3689.0 g 0 0 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 3376.0 t 0 0 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0 3622.0
MA0500.2_rc_shift4 (MYOG_rc)				; dyads_m32 versus MA0500.2_rc (MYOG_rc); m=9/35; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.695768; ----sarCAGCTGyts- ; cor=; Ncor= a 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0
MA0521.1_shift5 (Tcf12)				; dyads_m32 versus MA0521.1 (Tcf12); m=10/35; ncol2=11; w=11; offset=2; strand=D; shift=5; score=0.684148; -----rRCAGCTGswg- ; cor=; Ncor= a 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)				; dyads_m32 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=11/35; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.68211; ----rmaCAGGTGtky- ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0 0
MA1641.1_shift4 (MYF5)				; dyads_m32 versus MA1641.1 (MYF5); m=12/35; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.661923; ----gvaCAGCTGtbc- ; cor=; Ncor= a 0 0 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 0 c 0 0 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 0 g 0 0 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 0 t 0 0 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0 0
MA1619.1_rc_shift4 (Ptf1a(var.2)_rc)				; dyads_m32 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=13/35; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.658495; ----rmaCAGCTGtky- ; cor=; Ncor= a 0 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 0 c 0 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 0 g 0 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 0 t 0 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0 0
MA0091.1_rc_shift5 (TAL1::TCF3_rc)				; dyads_m32 versus MA0091.1_rc (TAL1::TCF3_rc); m=14/35; ncol2=12; w=12; offset=2; strand=R; shift=5; score=0.654505; -----AmCAKMTGkTck ; cor=; Ncor= a 0 0 0 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 9.0 c 0 0 0 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 8.0 g 0 0 0 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 14.0 t 0 0 0 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0 13.0
MA0816.1_shift5 (Ascl2)				; dyads_m32 versus MA0816.1 (Ascl2); m=15/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.621556; -----arCAGCTGyy-- ; cor=; Ncor= a 0 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0
MA0744.2_shift0 (SCRT2)				; dyads_m32 versus MA0744.2 (SCRT2); m=16/35; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.615079; rrwkCAACAGGTggtw- ; cor=; Ncor= a 18855.0 23310.0 29945.0 5353.0 1378.0 53425.0 62366.0 231.0 63880.0 7306.0 1862.0 2078.0 10481.0 13383.0 16058.0 17881.0 0 c 13345.0 12732.0 6319.0 7236.0 59161.0 5536.0 413.0 64856.0 294.0 728.0 972.0 3475.0 5661.0 11351.0 16085.0 13846.0 0 g 17680.0 17497.0 12473.0 35769.0 1339.0 2265.0 1878.0 319.0 252.0 56105.0 60636.0 1168.0 38133.0 25288.0 14716.0 12430.0 0 t 15730.0 12071.0 16873.0 17252.0 3732.0 4384.0 953.0 204.0 1184.0 1471.0 2140.0 58889.0 11335.0 15588.0 18751.0 21453.0 0
MA0743.2_shift0 (SCRT1)				; dyads_m32 versus MA0743.2 (SCRT1); m=17/35; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.609334; wawkCAACAGGTGgtw- ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0 0
MA1105.2_shift3 (GRHL2)				; dyads_m32 versus MA1105.2 (GRHL2); m=18/35; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.608711; ---arAACAGGTTtk-- ; cor=; Ncor= a 0 0 0 14483.0 17842.0 36467.0 37065.0 503.0 34024.0 2824.0 642.0 1878.0 1752.0 7061.0 8868.0 0 0 c 0 0 0 9741.0 6996.0 1147.0 712.0 40446.0 1543.0 581.0 987.0 2331.0 2000.0 9341.0 8528.0 0 0 g 0 0 0 9161.0 10776.0 2646.0 2841.0 609.0 485.0 37226.0 39624.0 748.0 1220.0 7961.0 10536.0 0 0 t 0 0 0 8493.0 6264.0 1618.0 1260.0 320.0 5826.0 1247.0 625.0 36921.0 36906.0 17515.0 13946.0 0 0
MA0820.1_rc_shift5 (FIGLA_rc)				; dyads_m32 versus MA0820.1_rc (FIGLA_rc); m=19/35; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.604038; -----wmCAGGTGkw-- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0 0
MA0665.1_rc_shift5 (MSC_rc)				; dyads_m32 versus MA0665.1_rc (MSC_rc); m=20/35; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.603728; -----AACAGCTGTT-- ; cor=; Ncor= a 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 c 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 g 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 t 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0
MA1559.1_shift5 (SNAI3)				; dyads_m32 versus MA1559.1 (SNAI3); m=21/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.603605; -----arCAGGTGya-- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0 0
MA0667.1_rc_shift5 (MYF6_rc)				; dyads_m32 versus MA0667.1_rc (MYF6_rc); m=22/35; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.590803; -----RACAGyTGTT-- ; cor=; Ncor= a 0 0 0 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 0 c 0 0 0 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 0 g 0 0 0 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 0 t 0 0 0 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0 0
MA1472.1_rc_shift5 (BHLHA15(var.2)_rc)				; dyads_m32 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=23/35; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.585255; -----rrCAGCTGbt-- ; cor=; Ncor= a 0 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 c 0 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 g 0 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 t 0 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0
MA0691.1_shift5 (TFAP4)				; dyads_m32 versus MA0691.1 (TFAP4); m=24/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.584979; -----AwCAGCTGwT-- ; cor=; Ncor= a 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0
MA1100.2_shift5 (ASCL1)				; dyads_m32 versus MA1100.2 (ASCL1); m=25/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.576823; -----rrCAGCTGcy-- ; cor=; Ncor= a 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0
MA0103.3_rc_shift4 (ZEB1_rc)				; dyads_m32 versus MA0103.3_rc (ZEB1_rc); m=26/35; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.572607; ----sssCAGGTGss-- ; cor=; Ncor= a 0 0 0 0 3856.0 3153.0 3408.0 129.0 19269.0 30.0 122.0 1.0 662.0 4715.0 3692.0 0 0 c 0 0 0 0 5828.0 6601.0 5178.0 19381.0 355.0 649.0 97.0 223.0 158.0 5179.0 5228.0 0 0 g 0 0 0 0 6955.0 6117.0 9561.0 178.0 501.0 19257.0 19878.0 0.0 19195.0 5550.0 7998.0 0 0 t 0 0 0 0 3490.0 4258.0 1982.0 441.0 4.0 193.0 32.0 19905.0 114.0 4685.0 3211.0 0 0
MA1467.1_shift5 (ATOH1(var.2))				; dyads_m32 versus MA1467.1 (ATOH1(var.2)); m=27/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.571019; -----AACAGCTGTY-- ; cor=; Ncor= a 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 0 c 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 0 g 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 0 t 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0 0
MA1558.1_shift5 (SNAI1)				; dyads_m32 versus MA1558.1 (SNAI1); m=28/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.562735; -----drCAGGTGyr-- ; cor=; Ncor= a 0 0 0 0 0 5274.0 6993.0 446.0 19982.0 1766.0 72.0 38.0 706.0 1639.0 10088.0 0 0 c 0 0 0 0 0 3187.0 501.0 19982.0 297.0 517.0 5.0 0.0 0.0 10938.0 4592.0 0 0 g 0 0 0 0 0 6410.0 12989.0 275.0 91.0 19982.0 19982.0 42.0 19982.0 5306.0 9894.0 0 0 t 0 0 0 0 0 5112.0 3518.0 340.0 568.0 306.0 28.0 19982.0 311.0 9044.0 6356.0 0 0
MA1648.1_rc_shift4 (TCF12(var.2)_rc)				; dyads_m32 versus MA1648.1_rc (TCF12(var.2)_rc); m=29/35; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.554269; ----srGCAGGTGss-- ; cor=; Ncor= a 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 0 0 c 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 0 0 g 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 0 0 t 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0 0 0
MA0048.2_rc_shift5 (NHLH1_rc)				; dyads_m32 versus MA0048.2_rc (NHLH1_rc); m=30/35; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.538757; -----mGCAGCTGCg-- ; cor=; Ncor= a 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 0 c 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 0 g 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 0 t 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0 0
MA1635.1_shift5 (BHLHE22(var.2))				; dyads_m32 versus MA1635.1 (BHLHE22(var.2)); m=31/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.532986; -----csCAGCTGsg-- ; cor=; Ncor= a 0 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 c 0 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 g 0 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 t 0 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0
MA1570.1_shift5 (TFAP4(var.2))				; dyads_m32 versus MA1570.1 (TFAP4(var.2)); m=32/35; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.508704; -----ahCAyrTGkt-- ; cor=; Ncor= a 0 0 0 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 0 c 0 0 0 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 0 g 0 0 0 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 0 t 0 0 0 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0 0
MA1647.1_rc_shift1 (PRDM4_rc)				; dyads_m32 versus MA1647.1_rc (PRDM4_rc); m=33/35; ncol2=11; w=9; offset=-2; strand=R; shift=1; score=0.410198; -twGAAACAGhy----- ; cor=; Ncor= a 0 1799.0 2962.0 292.0 6811.0 6288.0 6889.0 39.0 5543.0 154.0 2123.0 1559.0 0 0 0 0 0 c 0 1344.0 726.0 129.0 111.0 393.0 82.0 6813.0 566.0 316.0 2079.0 2553.0 0 0 0 0 0 g 0 1532.0 1456.0 6353.0 138.0 405.0 137.0 110.0 286.0 6504.0 1012.0 1163.0 0 0 0 0 0 t 0 2580.0 2111.0 481.0 195.0 169.0 147.0 293.0 860.0 281.0 2041.0 1980.0 0 0 0 0 0
MA0622.1_rc_shift6 (Mlxip_rc)				; dyads_m32 versus MA0622.1_rc (Mlxip_rc); m=34/35; ncol2=8; w=8; offset=3; strand=R; shift=6; score=0.404496; ------mCACGTGv--- ; cor=; Ncor= a 0 0 0 0 0 0 499.0 0.0 999.0 0.0 0.0 0.0 0.0 263.0 0 0 0 c 0 0 0 0 0 0 250.0 999.0 0.0 999.0 0.0 0.0 0.0 421.0 0 0 0 g 0 0 0 0 0 0 63.0 0.0 0.0 0.0 999.0 0.0 999.0 263.0 0 0 0 t 0 0 0 0 0 0 188.0 0.0 0.0 0.0 0.0 999.0 0.0 53.0 0 0 0
MA0480.1_rc_shift1 (Foxo1_rc)				; dyads_m32 versus MA0480.1_rc (Foxo1_rc); m=35/35; ncol2=11; w=9; offset=-2; strand=R; shift=1; score=0.401638; -wGTAAACArsa----- ; cor=; Ncor= a 0 774.0 483.0 462.0 2203.0 2490.0 2490.0 0.0 2490.0 788.0 332.0 1267.0 0 0 0 0 0 c 0 71.0 0.0 0.0 287.0 0.0 0.0 2490.0 0.0 209.0 752.0 478.0 0 0 0 0 0 g 0 573.0 2007.0 157.0 0.0 0.0 0.0 0.0 0.0 1406.0 1279.0 277.0 0 0 0 0 0 t 0 1072.0 0.0 1871.0 0.0 0.0 0.0 0.0 0.0 87.0 127.0 468.0 0 0 0 0 0