One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m4/peak-motifs_dyads_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m4/peak-motifs_dyads_m4_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: dyads_m4_shift0 ; 16 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
dyads_m4_shift0 (dyads_m4dyads_m4)
; dyads_m4 (dyads_m4dyads_m4); m=0 (reference); ncol1=18; shift=0; ncol=18; sstGACAGCAGCTGCChc ; Alignment reference a 27 25 19 6 98 0 111 9 1 104 0 0 2 0 4 14 38 20 c 31 35 13 13 4 109 1 3 114 1 2 110 2 0 99 83 30 49 g 38 36 27 89 8 4 1 102 0 1 112 5 0 115 5 8 18 26 t 19 19 56 7 5 2 2 1 0 9 1 0 111 0 7 10 29 20

MA0500.2_rc_shift5 (MYOG_rc)
; dyads_m4 versus MA0500.2_rc (MYOG_rc); m=1/15; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.567925; -----sarCAGCTGyts- ; cor=; Ncor= a 0 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0

MA1631.1_shift5 (ASCL1(var.2))
; dyads_m4 versus MA1631.1 (ASCL1(var.2)); m=2/15; ncol2=13; w=13; offset=5; strand=D; shift=5; score=0.546708; -----cdgCACCTGCysc ; cor=; Ncor= a 0 0 0 0 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 c 0 0 0 0 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 g 0 0 0 0 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 t 0 0 0 0 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0

MA0830.2_shift5 (TCF4)
; dyads_m4 versus MA0830.2 (TCF4); m=3/15; ncol2=13; w=13; offset=5; strand=D; shift=5; score=0.531562; -----cggCACCTGccss ; cor=; Ncor= a 0 0 0 0 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 c 0 0 0 0 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 g 0 0 0 0 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 t 0 0 0 0 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0

MA0816.1_shift6 (Ascl2)
; dyads_m4 versus MA0816.1 (Ascl2); m=4/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.513268; ------arCAGCTGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0

MA0521.1_shift6 (Tcf12)
; dyads_m4 versus MA0521.1 (Tcf12); m=5/15; ncol2=11; w=11; offset=6; strand=D; shift=6; score=0.510771; ------rRCAGCTGswg- ; cor=; Ncor= a 0 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0

MA1100.2_shift6 (ASCL1)
; dyads_m4 versus MA1100.2 (ASCL1); m=6/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.496133; ------rrCAGCTGcy-- ; cor=; Ncor= a 0 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0

MA1619.1_shift5 (Ptf1a(var.2))
; dyads_m4 versus MA1619.1 (Ptf1a(var.2)); m=7/15; ncol2=12; w=12; offset=5; strand=D; shift=5; score=0.484305; -----rmaCAGCTGtky- ; cor=; Ncor= a 0 0 0 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 c 0 0 0 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 g 0 0 0 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 t 0 0 0 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0

MA1641.1_rc_shift5 (MYF5_rc)
; dyads_m4 versus MA1641.1_rc (MYF5_rc); m=8/15; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.481395; -----gvaCAGCTGtbc- ; cor=; Ncor= a 0 0 0 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 c 0 0 0 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 g 0 0 0 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 t 0 0 0 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0

MA0048.2_rc_shift6 (NHLH1_rc)
; dyads_m4 versus MA0048.2_rc (NHLH1_rc); m=9/15; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.479065; ------mGCAGCTGCg-- ; cor=; Ncor= a 0 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 0 c 0 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 0 g 0 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 0 t 0 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0 0

MA1646.1_shift2 (OSR2)
; dyads_m4 versus MA1646.1 (OSR2); m=10/15; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.471187; --amaCAGAAGChr---- ; cor=; Ncor= a 0 0 4437.0 4244.0 8520.0 254.0 13599.0 216.0 11678.0 13725.0 416.0 666.0 4386.0 4048.0 0 0 0 0 c 0 0 3641.0 4206.0 2221.0 13937.0 197.0 229.0 703.0 288.0 170.0 12109.0 4274.0 3304.0 0 0 0 0 g 0 0 3246.0 3006.0 2117.0 406.0 737.0 14206.0 901.0 516.0 13982.0 841.0 2266.0 4726.0 0 0 0 0 t 0 0 3484.0 3352.0 1950.0 211.0 275.0 157.0 1526.0 279.0 240.0 1192.0 3882.0 2730.0 0 0 0 0

MA1635.1_rc_shift6 (BHLHE22(var.2)_rc)
; dyads_m4 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=11/15; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.470202; ------csCAGCTGsg-- ; cor=; Ncor= a 0 0 0 0 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 c 0 0 0 0 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 g 0 0 0 0 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 t 0 0 0 0 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0

MA1472.1_shift6 (BHLHA15(var.2))
; dyads_m4 versus MA1472.1 (BHLHA15(var.2)); m=12/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.460299; ------avCAGCTGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 c 0 0 0 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 g 0 0 0 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 t 0 0 0 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0

MA1467.1_shift6 (ATOH1(var.2))
; dyads_m4 versus MA1467.1 (ATOH1(var.2)); m=13/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.454727; ------AACAGCTGTY-- ; cor=; Ncor= a 0 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 0 c 0 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 0 g 0 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 0 t 0 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0 0

MA0691.1_shift6 (TFAP4)
; dyads_m4 versus MA0691.1 (TFAP4); m=14/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.416827; ------AwCAGCTGwT-- ; cor=; Ncor= a 0 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0

MA0665.1_rc_shift6 (MSC_rc)
; dyads_m4 versus MA0665.1_rc (MSC_rc); m=15/15; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.40585; ------AACAGCTGTT-- ; cor=; Ncor= a 0 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 c 0 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 g 0 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 t 0 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m4_shift0 (dyads_m4dyads_m4)				; dyads_m4 (dyads_m4dyads_m4); m=0 (reference); ncol1=18; shift=0; ncol=18; sstGACAGCAGCTGCChc ; Alignment reference a 27 25 19 6 98 0 111 9 1 104 0 0 2 0 4 14 38 20 c 31 35 13 13 4 109 1 3 114 1 2 110 2 0 99 83 30 49 g 38 36 27 89 8 4 1 102 0 1 112 5 0 115 5 8 18 26 t 19 19 56 7 5 2 2 1 0 9 1 0 111 0 7 10 29 20
MA0500.2_rc_shift5 (MYOG_rc)				; dyads_m4 versus MA0500.2_rc (MYOG_rc); m=1/15; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.567925; -----sarCAGCTGyts- ; cor=; Ncor= a 0 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0
MA1631.1_shift5 (ASCL1(var.2))				; dyads_m4 versus MA1631.1 (ASCL1(var.2)); m=2/15; ncol2=13; w=13; offset=5; strand=D; shift=5; score=0.546708; -----cdgCACCTGCysc ; cor=; Ncor= a 0 0 0 0 0 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 c 0 0 0 0 0 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 g 0 0 0 0 0 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 t 0 0 0 0 0 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0
MA0830.2_shift5 (TCF4)				; dyads_m4 versus MA0830.2 (TCF4); m=3/15; ncol2=13; w=13; offset=5; strand=D; shift=5; score=0.531562; -----cggCACCTGccss ; cor=; Ncor= a 0 0 0 0 0 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 c 0 0 0 0 0 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 g 0 0 0 0 0 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 t 0 0 0 0 0 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0
MA0816.1_shift6 (Ascl2)				; dyads_m4 versus MA0816.1 (Ascl2); m=4/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.513268; ------arCAGCTGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 0 c 0 0 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 0 g 0 0 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 0 t 0 0 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0 0
MA0521.1_shift6 (Tcf12)				; dyads_m4 versus MA0521.1 (Tcf12); m=5/15; ncol2=11; w=11; offset=6; strand=D; shift=6; score=0.510771; ------rRCAGCTGswg- ; cor=; Ncor= a 0 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0
MA1100.2_shift6 (ASCL1)				; dyads_m4 versus MA1100.2 (ASCL1); m=6/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.496133; ------rrCAGCTGcy-- ; cor=; Ncor= a 0 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0
MA1619.1_shift5 (Ptf1a(var.2))				; dyads_m4 versus MA1619.1 (Ptf1a(var.2)); m=7/15; ncol2=12; w=12; offset=5; strand=D; shift=5; score=0.484305; -----rmaCAGCTGtky- ; cor=; Ncor= a 0 0 0 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 0 c 0 0 0 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 0 g 0 0 0 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 0 t 0 0 0 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0 0
MA1641.1_rc_shift5 (MYF5_rc)				; dyads_m4 versus MA1641.1_rc (MYF5_rc); m=8/15; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.481395; -----gvaCAGCTGtbc- ; cor=; Ncor= a 0 0 0 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 c 0 0 0 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 g 0 0 0 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 t 0 0 0 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0
MA0048.2_rc_shift6 (NHLH1_rc)				; dyads_m4 versus MA0048.2_rc (NHLH1_rc); m=9/15; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.479065; ------mGCAGCTGCg-- ; cor=; Ncor= a 0 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 0 c 0 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 0 g 0 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 0 t 0 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0 0
MA1646.1_shift2 (OSR2)				; dyads_m4 versus MA1646.1 (OSR2); m=10/15; ncol2=12; w=12; offset=2; strand=D; shift=2; score=0.471187; --amaCAGAAGChr---- ; cor=; Ncor= a 0 0 4437.0 4244.0 8520.0 254.0 13599.0 216.0 11678.0 13725.0 416.0 666.0 4386.0 4048.0 0 0 0 0 c 0 0 3641.0 4206.0 2221.0 13937.0 197.0 229.0 703.0 288.0 170.0 12109.0 4274.0 3304.0 0 0 0 0 g 0 0 3246.0 3006.0 2117.0 406.0 737.0 14206.0 901.0 516.0 13982.0 841.0 2266.0 4726.0 0 0 0 0 t 0 0 3484.0 3352.0 1950.0 211.0 275.0 157.0 1526.0 279.0 240.0 1192.0 3882.0 2730.0 0 0 0 0
MA1635.1_rc_shift6 (BHLHE22(var.2)_rc)				; dyads_m4 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=11/15; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.470202; ------csCAGCTGsg-- ; cor=; Ncor= a 0 0 0 0 0 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 c 0 0 0 0 0 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 g 0 0 0 0 0 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 t 0 0 0 0 0 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0
MA1472.1_shift6 (BHLHA15(var.2))				; dyads_m4 versus MA1472.1 (BHLHA15(var.2)); m=12/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.460299; ------avCAGCTGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 c 0 0 0 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 g 0 0 0 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 t 0 0 0 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0
MA1467.1_shift6 (ATOH1(var.2))				; dyads_m4 versus MA1467.1 (ATOH1(var.2)); m=13/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.454727; ------AACAGCTGTY-- ; cor=; Ncor= a 0 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 0 c 0 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 0 g 0 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 0 t 0 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0 0
MA0691.1_shift6 (TFAP4)				; dyads_m4 versus MA0691.1 (TFAP4); m=14/15; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.416827; ------AwCAGCTGwT-- ; cor=; Ncor= a 0 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0
MA0665.1_rc_shift6 (MSC_rc)				; dyads_m4 versus MA0665.1_rc (MSC_rc); m=15/15; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.40585; ------AACAGCTGTT-- ; cor=; Ncor= a 0 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 c 0 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 g 0 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 t 0 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0