One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m5/peak-motifs_dyads_m5.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/dyads_m5/peak-motifs_dyads_m5_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: dyads_m5_shift0 ; 15 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
dyads_m5_shift0 (dyads_m5dyads_m5)
; dyads_m5 (dyads_m5dyads_m5); m=0 (reference); ncol1=18; shift=0; ncol=18; sstGACAGCAGCTGGgss ; Alignment reference a 20 20 18 4 75 3 82 7 1 77 1 1 1 0 6 10 22 13 c 23 29 7 5 4 80 2 0 87 0 2 85 0 1 14 14 25 34 g 32 29 17 80 9 6 5 80 1 1 86 2 0 88 65 59 24 25 t 14 11 47 0 1 0 0 2 0 11 0 1 88 0 4 6 18 17

MA0500.2_rc_shift5 (MYOG_rc)
; dyads_m5 versus MA0500.2_rc (MYOG_rc); m=1/14; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.54554; -----sarCAGCTGyts- ; cor=; Ncor= a 0 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0

MA0521.1_shift6 (Tcf12)
; dyads_m5 versus MA0521.1 (Tcf12); m=2/14; ncol2=11; w=11; offset=6; strand=D; shift=6; score=0.516183; ------rRCAGCTGswg- ; cor=; Ncor= a 0 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0

MA1619.1_rc_shift5 (Ptf1a(var.2)_rc)
; dyads_m5 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=3/14; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.501048; -----rmaCAGCTGtky- ; cor=; Ncor= a 0 0 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 0 c 0 0 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 0 g 0 0 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 0 t 0 0 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0 0

MA1641.1_rc_shift5 (MYF5_rc)
; dyads_m5 versus MA1641.1_rc (MYF5_rc); m=4/14; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.48892; -----gvaCAGCTGtbc- ; cor=; Ncor= a 0 0 0 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 c 0 0 0 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 g 0 0 0 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 t 0 0 0 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0

MA0048.2_rc_shift6 (NHLH1_rc)
; dyads_m5 versus MA0048.2_rc (NHLH1_rc); m=5/14; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.478634; ------mGCAGCTGCg-- ; cor=; Ncor= a 0 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 0 c 0 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 0 g 0 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 0 t 0 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0 0

MA1635.1_shift6 (BHLHE22(var.2))
; dyads_m5 versus MA1635.1 (BHLHE22(var.2)); m=6/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.475265; ------csCAGCTGsg-- ; cor=; Ncor= a 0 0 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 c 0 0 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 g 0 0 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 t 0 0 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0

MA0816.1_rc_shift6 (Ascl2_rc)
; dyads_m5 versus MA0816.1_rc (Ascl2_rc); m=7/14; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.470717; ------rrCAGCTGyt-- ; cor=; Ncor= a 0 0 0 0 0 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 c 0 0 0 0 0 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 g 0 0 0 0 0 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 t 0 0 0 0 0 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0

MA1100.2_shift6 (ASCL1)
; dyads_m5 versus MA1100.2 (ASCL1); m=8/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.462121; ------rrCAGCTGcy-- ; cor=; Ncor= a 0 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0

MA1472.1_shift6 (BHLHA15(var.2))
; dyads_m5 versus MA1472.1 (BHLHA15(var.2)); m=9/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score= 0.4587; ------avCAGCTGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 c 0 0 0 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 g 0 0 0 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 t 0 0 0 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0

MA1648.1_rc_shift5 (TCF12(var.2)_rc)
; dyads_m5 versus MA1648.1_rc (TCF12(var.2)_rc); m=10/14; ncol2=11; w=11; offset=5; strand=R; shift=5; score=0.438307; -----srGCAGGTGss-- ; cor=; Ncor= a 0 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 0 0 c 0 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 0 0 g 0 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 0 0 t 0 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0 0 0

MA0522.3_rc_shift5 (TCF3_rc)
; dyads_m5 versus MA0522.3_rc (TCF3_rc); m=11/14; ncol2=11; w=11; offset=5; strand=R; shift=5; score=0.431924; -----ssGCAGGTGbs-- ; cor=; Ncor= a 0 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 0 0 c 0 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 0 0 g 0 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 0 0 t 0 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0 0 0

MA0691.1_shift6 (TFAP4)
; dyads_m5 versus MA0691.1 (TFAP4); m=12/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.423608; ------AwCAGCTGwT-- ; cor=; Ncor= a 0 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0

MA1467.1_rc_shift3 (ATOH1(var.2)_rc)
; dyads_m5 versus MA1467.1_rc (ATOH1(var.2)_rc); m=13/14; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.411822; ---RACAGCTGTT----- ; cor=; Ncor= a 0 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 0 0 c 0 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 0 0 g 0 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 0 0 t 0 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0 0 0

MA0665.1_rc_shift6 (MSC_rc)
; dyads_m5 versus MA0665.1_rc (MSC_rc); m=14/14; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.405414; ------AACAGCTGTT-- ; cor=; Ncor= a 0 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 c 0 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 g 0 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 t 0 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
dyads_m5_shift0 (dyads_m5dyads_m5)				; dyads_m5 (dyads_m5dyads_m5); m=0 (reference); ncol1=18; shift=0; ncol=18; sstGACAGCAGCTGGgss ; Alignment reference a 20 20 18 4 75 3 82 7 1 77 1 1 1 0 6 10 22 13 c 23 29 7 5 4 80 2 0 87 0 2 85 0 1 14 14 25 34 g 32 29 17 80 9 6 5 80 1 1 86 2 0 88 65 59 24 25 t 14 11 47 0 1 0 0 2 0 11 0 1 88 0 4 6 18 17
MA0500.2_rc_shift5 (MYOG_rc)				; dyads_m5 versus MA0500.2_rc (MYOG_rc); m=1/14; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.54554; -----sarCAGCTGyts- ; cor=; Ncor= a 0 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 c 0 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 g 0 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 t 0 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0
MA0521.1_shift6 (Tcf12)				; dyads_m5 versus MA0521.1 (Tcf12); m=2/14; ncol2=11; w=11; offset=6; strand=D; shift=6; score=0.516183; ------rRCAGCTGswg- ; cor=; Ncor= a 0 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0
MA1619.1_rc_shift5 (Ptf1a(var.2)_rc)				; dyads_m5 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=3/14; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.501048; -----rmaCAGCTGtky- ; cor=; Ncor= a 0 0 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 0 c 0 0 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 0 g 0 0 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 0 t 0 0 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0 0
MA1641.1_rc_shift5 (MYF5_rc)				; dyads_m5 versus MA1641.1_rc (MYF5_rc); m=4/14; ncol2=12; w=12; offset=5; strand=R; shift=5; score=0.48892; -----gvaCAGCTGtbc- ; cor=; Ncor= a 0 0 0 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 c 0 0 0 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 g 0 0 0 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 t 0 0 0 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0
MA0048.2_rc_shift6 (NHLH1_rc)				; dyads_m5 versus MA0048.2_rc (NHLH1_rc); m=5/14; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.478634; ------mGCAGCTGCg-- ; cor=; Ncor= a 0 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 0 c 0 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 0 g 0 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 0 t 0 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0 0
MA1635.1_shift6 (BHLHE22(var.2))				; dyads_m5 versus MA1635.1 (BHLHE22(var.2)); m=6/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.475265; ------csCAGCTGsg-- ; cor=; Ncor= a 0 0 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 c 0 0 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 g 0 0 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 t 0 0 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0
MA0816.1_rc_shift6 (Ascl2_rc)				; dyads_m5 versus MA0816.1_rc (Ascl2_rc); m=7/14; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.470717; ------rrCAGCTGyt-- ; cor=; Ncor= a 0 0 0 0 0 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 c 0 0 0 0 0 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 g 0 0 0 0 0 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 t 0 0 0 0 0 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0
MA1100.2_shift6 (ASCL1)				; dyads_m5 versus MA1100.2 (ASCL1); m=8/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.462121; ------rrCAGCTGcy-- ; cor=; Ncor= a 0 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0
MA1472.1_shift6 (BHLHA15(var.2))				; dyads_m5 versus MA1472.1 (BHLHA15(var.2)); m=9/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score= 0.4587; ------avCAGCTGyy-- ; cor=; Ncor= a 0 0 0 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 0 c 0 0 0 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 0 g 0 0 0 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 0 t 0 0 0 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0 0
MA1648.1_rc_shift5 (TCF12(var.2)_rc)				; dyads_m5 versus MA1648.1_rc (TCF12(var.2)_rc); m=10/14; ncol2=11; w=11; offset=5; strand=R; shift=5; score=0.438307; -----srGCAGGTGss-- ; cor=; Ncor= a 0 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 0 0 c 0 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 0 0 g 0 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 0 0 t 0 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0 0 0
MA0522.3_rc_shift5 (TCF3_rc)				; dyads_m5 versus MA0522.3_rc (TCF3_rc); m=11/14; ncol2=11; w=11; offset=5; strand=R; shift=5; score=0.431924; -----ssGCAGGTGbs-- ; cor=; Ncor= a 0 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 0 0 c 0 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 0 0 g 0 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 0 0 t 0 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0 0 0
MA0691.1_shift6 (TFAP4)				; dyads_m5 versus MA0691.1 (TFAP4); m=12/14; ncol2=10; w=10; offset=6; strand=D; shift=6; score=0.423608; ------AwCAGCTGwT-- ; cor=; Ncor= a 0 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 c 0 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 g 0 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 t 0 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0
MA1467.1_rc_shift3 (ATOH1(var.2)_rc)				; dyads_m5 versus MA1467.1_rc (ATOH1(var.2)_rc); m=13/14; ncol2=10; w=10; offset=3; strand=R; shift=3; score=0.411822; ---RACAGCTGTT----- ; cor=; Ncor= a 0 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 0 0 c 0 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 0 0 g 0 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 0 0 t 0 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0 0 0
MA0665.1_rc_shift6 (MSC_rc)				; dyads_m5 versus MA0665.1_rc (MSC_rc); m=14/14; ncol2=10; w=10; offset=6; strand=R; shift=6; score=0.405414; ------AACAGCTGTT-- ; cor=; Ncor= a 0 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 c 0 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 g 0 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 t 0 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0