One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m23/peak-motifs_oligos_6nt_mkv3_m23.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m23/peak-motifs_oligos_6nt_mkv3_m23_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m23_shift5 ; 44 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_6nt_mkv3_m23_shift5 (oligos_6nt_mkv3_m23oligos_6nt_mkv3_m23)     
; oligos_6nt_mkv3_m23 (oligos_6nt_mkv3_m23oligos_6nt_mkv3_m23); m=0 (reference); ncol1=10; shift=5; ncol=16; -----gmCAAGTGks-
; Alignment reference
a	0	0	0	0	0	99	128	0	441	441	0	0	0	83	71	0
c	0	0	0	0	0	110	127	441	0	0	0	0	0	102	151	0
g	0	0	0	0	0	150	104	0	0	0	441	0	441	122	124	0
t	0	0	0	0	0	82	82	0	0	0	0	441	0	134	95	0
MA0672.1_rc_shift5 (NKX2-3_rc) 
; oligos_6nt_mkv3_m23 versus MA0672.1_rc (NKX2-3_rc); m=1/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.882701; -----btyAAGTGst-
; cor=; Ncor=
a	0	0	0	0	0	566.0	2437.0	343.0	9278.0	9278.0	0.0	250.0	132.0	140.0	1535.0	0
c	0	0	0	0	0	2788.0	1831.0	5037.0	0.0	18.0	0.0	16.0	0.0	4499.0	1989.0	0
g	0	0	0	0	0	2754.0	917.0	1451.0	939.0	0.0	9278.0	98.0	9278.0	9278.0	2182.0	0
t	0	0	0	0	0	3170.0	9278.0	4241.0	0.0	0.0	8.0	9278.0	38.0	2025.0	3572.0	0
MA0673.1_rc_shift5 (NKX2-8_rc) 
; oligos_6nt_mkv3_m23 versus MA0673.1_rc (NKX2-8_rc); m=2/43; ncol2=9; w=9; offset=0; strand=R; shift=5; score=0.784267; -----yTsRAGTGs--
; cor=; Ncor=
a	0	0	0	0	0	811.0	2158.0	271.0	8562.0	8562.0	110.0	516.0	2155.0	249.0	0	0
c	0	0	0	0	0	2593.0	696.0	4286.0	0.0	0.0	0.0	0.0	0.0	2843.0	0	0
g	0	0	0	0	0	1964.0	908.0	2267.0	3197.0	91.0	8562.0	595.0	8562.0	3529.0	0	0
t	0	0	0	0	0	3194.0	8562.0	1738.0	23.0	0.0	14.0	8562.0	70.0	1942.0	0	0
MA1108.2_rc_shift5 (MXI1_rc) 
; oligos_6nt_mkv3_m23 versus MA1108.2_rc (MXI1_rc); m=3/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.782366; -----gmCATGTGby-
; cor=; Ncor=
a	0	0	0	0	0	5366.0	6658.0	175.0	21541.0	0.0	468.0	7.0	460.0	3945.0	5212.0	0
c	0	0	0	0	0	5394.0	7228.0	21232.0	0.0	1542.0	18.0	170.0	97.0	6078.0	6326.0	0
g	0	0	0	0	0	6343.0	5329.0	114.0	507.0	0.0	21552.0	1.0	21382.0	5841.0	4724.0	0
t	0	0	0	0	0	4945.0	2833.0	527.0	0.0	20506.0	10.0	21870.0	109.0	6184.0	5786.0	0
MA0626.1_shift5 (Npas2) 
; oligos_6nt_mkv3_m23 versus MA0626.1 (Npas2); m=4/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.782323; -----dsCACGTGtm-
; cor=; Ncor=
a	0	0	0	0	0	273.0	154.0	0.0	999.0	81.0	81.0	0.0	81.0	74.0	297.0	0
c	0	0	0	0	0	177.0	377.0	999.0	0.0	918.0	0.0	0.0	0.0	172.0	299.0	0
g	0	0	0	0	0	293.0	420.0	0.0	0.0	0.0	918.0	0.0	918.0	188.0	202.0	0
t	0	0	0	0	0	257.0	48.0	0.0	0.0	0.0	0.0	999.0	0.0	566.0	202.0	0
MA1558.1_shift5 (SNAI1) 
; oligos_6nt_mkv3_m23 versus MA1558.1 (SNAI1); m=5/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.779216; -----drCAGGTGyr-
; cor=; Ncor=
a	0	0	0	0	0	5274.0	6993.0	446.0	19982.0	1766.0	72.0	38.0	706.0	1639.0	10088.0	0
c	0	0	0	0	0	3187.0	501.0	19982.0	297.0	517.0	5.0	0.0	0.0	10938.0	4592.0	0
g	0	0	0	0	0	6410.0	12989.0	275.0	91.0	19982.0	19982.0	42.0	19982.0	5306.0	9894.0	0
t	0	0	0	0	0	5112.0	3518.0	340.0	568.0	306.0	28.0	19982.0	311.0	9044.0	6356.0	0
MA0058.3_rc_shift5 (MAX_rc) 
; oligos_6nt_mkv3_m23 versus MA0058.3_rc (MAX_rc); m=6/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.767058; -----rgCACGTGkt-
; cor=; Ncor=
a	0	0	0	0	0	2543.0	1446.0	36.0	6876.0	19.0	229.0	38.0	0.0	637.0	719.0	0
c	0	0	0	0	0	986.0	1638.0	6876.0	20.0	6876.0	7.0	87.0	0.0	1514.0	1295.0	0
g	0	0	0	0	0	2225.0	2450.0	27.0	159.0	39.0	6876.0	0.0	6876.0	2809.0	1556.0	0
t	0	0	0	0	0	1122.0	1341.0	0.0	69.0	329.0	0.0	6876.0	39.0	1915.0	3307.0	0
MA0825.1_shift5 (MNT) 
; oligos_6nt_mkv3_m23 versus MA0825.1 (MNT); m=7/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.760293; -----avCACGTGcy-
; cor=; Ncor=
a	0	0	0	0	0	279.0	187.0	27.0	681.0	0.0	15.0	0.0	0.0	150.0	159.0	0
c	0	0	0	0	0	128.0	228.0	681.0	0.0	681.0	0.0	0.0	0.0	281.0	229.0	0
g	0	0	0	0	0	145.0	203.0	0.0	0.0	7.0	681.0	15.0	681.0	131.0	75.0	0
t	0	0	0	0	0	129.0	63.0	5.0	21.0	16.0	0.0	681.0	25.0	120.0	219.0	0
MA0100.3_shift5 (MYB) 
; oligos_6nt_mkv3_m23 versus MA0100.3 (MYB); m=8/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.758936; -----mbCAACTGhm-
; cor=; Ncor=
a	0	0	0	0	0	425.0	292.0	0.0	1478.0	1519.0	0.0	1.0	8.0	401.0	422.0	0
c	0	0	0	0	0	422.0	428.0	1513.0	3.0	2.0	1527.0	60.0	3.0	482.0	528.0	0
g	0	0	0	0	0	300.0	397.0	5.0	39.0	0.0	0.0	68.0	1516.0	147.0	225.0	0
t	0	0	0	0	0	380.0	410.0	9.0	7.0	6.0	0.0	1398.0	0.0	497.0	352.0	0
MA0820.1_rc_shift5 (FIGLA_rc) 
; oligos_6nt_mkv3_m23 versus MA0820.1_rc (FIGLA_rc); m=9/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.741325; -----wmCAGGTGkw-
; cor=; Ncor=
a	0	0	0	0	0	753.0	832.0	65.0	1780.0	0.0	0.0	14.0	29.0	237.0	449.0	0
c	0	0	0	0	0	289.0	569.0	1780.0	17.0	311.0	527.0	0.0	0.0	160.0	175.0	0
g	0	0	0	0	0	283.0	225.0	33.0	0.0	1780.0	1780.0	46.0	1780.0	693.0	270.0	0
t	0	0	0	0	0	455.0	154.0	36.0	56.0	9.0	0.0	1780.0	0.0	690.0	886.0	0
MA0819.1_shift5 (CLOCK) 
; oligos_6nt_mkv3_m23 versus MA0819.1 (CLOCK); m=10/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.74028; -----aACACGTGty-
; cor=; Ncor=
a	0	0	0	0	0	226.0	429.0	11.0	429.0	16.0	40.0	3.0	0.0	1.0	89.0	0
c	0	0	0	0	0	35.0	85.0	429.0	5.0	429.0	0.0	5.0	3.0	152.0	128.0	0
g	0	0	0	0	0	93.0	89.0	2.0	15.0	0.0	429.0	5.0	429.0	110.0	39.0	0
t	0	0	0	0	0	75.0	13.0	2.0	0.0	28.0	0.0	429.0	9.0	429.0	174.0	0
MA0823.1_rc_shift5 (HEY1_rc) 
; oligos_6nt_mkv3_m23 versus MA0823.1_rc (HEY1_rc); m=11/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.740158; -----grCACGTGyc-
; cor=; Ncor=
a	0	0	0	0	0	318.0	863.0	22.0	3338.0	0.0	0.0	21.0	15.0	110.0	352.0	0
c	0	0	0	0	0	373.0	380.0	3338.0	10.0	3338.0	0.0	123.0	3.0	1199.0	1788.0	0
g	0	0	0	0	0	2172.0	1762.0	19.0	474.0	18.0	3338.0	30.0	3338.0	656.0	761.0	0
t	0	0	0	0	0	475.0	333.0	32.0	0.0	0.0	0.0	3338.0	1.0	1373.0	437.0	0
MA0692.1_rc_shift5 (TFEB_rc) 
; oligos_6nt_mkv3_m23 versus MA0692.1_rc (TFEB_rc); m=12/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.733523; -----rTCACGTGry-
; cor=; Ncor=
a	0	0	0	0	0	2826.0	807.0	11.0	8715.0	5.0	1155.0	274.0	3.0	8715.0	343.0	0
c	0	0	0	0	0	558.0	872.0	8715.0	150.0	8715.0	83.0	62.0	0.0	2731.0	3748.0	0
g	0	0	0	0	0	5889.0	2342.0	10.0	169.0	288.0	8715.0	286.0	8715.0	4936.0	1553.0	0
t	0	0	0	0	0	283.0	8715.0	9.0	454.0	2762.0	0.0	8715.0	17.0	2545.0	4967.0	0
MA1464.1_shift5 (ARNT2) 
; oligos_6nt_mkv3_m23 versus MA1464.1 (ARNT2); m=13/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.729157; -----rtCACGTGms-
; cor=; Ncor=
a	0	0	0	0	0	11781.0	9572.0	505.0	40622.0	0.0	84.0	651.0	14.0	18559.0	7892.0	0
c	0	0	0	0	0	4265.0	4901.0	40622.0	122.0	40622.0	0.0	932.0	0.0	22063.0	12448.0	0
g	0	0	0	0	0	28841.0	9525.0	115.0	532.0	0.0	40622.0	111.0	40622.0	3912.0	12031.0	0
t	0	0	0	0	0	1951.0	40622.0	0.0	460.0	148.0	0.0	40622.0	971.0	7159.0	8251.0	0
MA0464.2_rc_shift5 (BHLHE40_rc) 
; oligos_6nt_mkv3_m23 versus MA0464.2_rc (BHLHE40_rc); m=14/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.727516; -----gkCACGTGmb-
; cor=; Ncor=
a	0	0	0	0	0	2587.0	500.0	72.0	11222.0	0.0	32.0	77.0	14.0	6222.0	1447.0	0
c	0	0	0	0	0	1385.0	129.0	11222.0	87.0	11222.0	2.0	78.0	0.0	5000.0	2926.0	0
g	0	0	0	0	0	5706.0	5295.0	12.0	248.0	30.0	11222.0	130.0	11222.0	481.0	3025.0	0
t	0	0	0	0	0	1544.0	5927.0	4.0	167.0	66.0	23.0	11222.0	59.0	1391.0	3824.0	0
MA0649.1_rc_shift5 (HEY2_rc) 
; oligos_6nt_mkv3_m23 versus MA0649.1_rc (HEY2_rc); m=15/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.724964; -----grCACGTGyC-
; cor=; Ncor=
a	0	0	0	0	0	264.0	753.0	30.0	1800.0	0.0	0.0	0.0	58.0	224.0	101.0	0
c	0	0	0	0	0	382.0	128.0	1800.0	0.0	1800.0	0.0	128.0	83.0	620.0	1800.0	0
g	0	0	0	0	0	869.0	1047.0	34.0	120.0	72.0	1800.0	0.0	1800.0	305.0	99.0	0
t	0	0	0	0	0	285.0	50.0	0.0	36.0	27.0	7.0	1800.0	84.0	651.0	107.0	0
MA1559.1_shift5 (SNAI3) 
; oligos_6nt_mkv3_m23 versus MA1559.1 (SNAI3); m=16/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.722652; -----arCAGGTGya-
; cor=; Ncor=
a	0	0	0	0	0	2952.0	3917.0	23.0	6248.0	118.0	0.0	0.0	94.0	432.0	4680.0	0
c	0	0	0	0	0	661.0	0.0	6248.0	0.0	29.0	18.0	12.0	0.0	6248.0	688.0	0
g	0	0	0	0	0	1525.0	2331.0	0.0	34.0	6248.0	6248.0	28.0	6248.0	1701.0	1569.0	0
t	0	0	0	0	0	1110.0	183.0	35.0	3.0	43.0	0.0	6248.0	30.0	3161.0	553.0	0
MA0664.1_shift5 (MLXIPL) 
; oligos_6nt_mkv3_m23 versus MA0664.1 (MLXIPL); m=17/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.717798; -----rtCACGTGat-
; cor=; Ncor=
a	0	0	0	0	0	345.0	126.0	0.0	411.0	2.0	20.0	0.0	0.0	356.0	138.0	0
c	0	0	0	0	0	31.0	28.0	448.0	0.0	452.0	2.0	0.0	0.0	110.0	181.0	0
g	0	0	0	0	0	220.0	133.0	11.0	2.0	12.0	735.0	3.0	727.0	87.0	53.0	0
t	0	0	0	0	0	113.0	468.0	0.0	5.0	0.0	0.0	562.0	0.0	113.0	442.0	0
MA1560.1_rc_shift5 (SOHLH2_rc) 
; oligos_6nt_mkv3_m23 versus MA1560.1_rc (SOHLH2_rc); m=18/43; ncol2=10; w=10; offset=0; strand=R; shift=5; score=0.715086; -----ygCACGTGcr-
; cor=; Ncor=
a	0	0	0	0	0	224.0	153.0	4.0	1212.0	15.0	7.0	0.0	70.0	276.0	313.0	0
c	0	0	0	0	0	369.0	172.0	1212.0	0.0	1212.0	11.0	41.0	29.0	1212.0	184.0	0
g	0	0	0	0	0	239.0	1212.0	4.0	65.0	0.0	1212.0	0.0	1212.0	264.0	485.0	0
t	0	0	0	0	0	381.0	272.0	41.0	36.0	14.0	0.0	1212.0	45.0	172.0	230.0	0
MA0616.2_shift5 (HES2) 
; oligos_6nt_mkv3_m23 versus MA0616.2 (HES2); m=19/43; ncol2=10; w=10; offset=0; strand=D; shift=5; score=0.700628; -----GgCACGTGyc-
; cor=; Ncor=
a	0	0	0	0	0	775.0	1501.0	118.0	6455.0	0.0	0.0	0.0	53.0	512.0	966.0	0
c	0	0	0	0	0	1193.0	1107.0	8483.0	0.0	8483.0	0.0	1098.0	15.0	4634.0	4464.0	0
g	0	0	0	0	0	8483.0	8483.0	85.0	2028.0	0.0	8483.0	0.0	8483.0	1289.0	1735.0	0
t	0	0	0	0	0	798.0	1581.0	73.0	0.0	129.0	0.0	8483.0	0.0	3849.0	1319.0	0
MA0103.3_rc_shift4 (ZEB1_rc) 
; oligos_6nt_mkv3_m23 versus MA0103.3_rc (ZEB1_rc); m=20/43; ncol2=11; w=10; offset=-1; strand=R; shift=4; score=0.698169; ----sssCAGGTGss-
; cor=; Ncor=
a	0	0	0	0	3856.0	3153.0	3408.0	129.0	19269.0	30.0	122.0	1.0	662.0	4715.0	3692.0	0
c	0	0	0	0	5828.0	6601.0	5178.0	19381.0	355.0	649.0	97.0	223.0	158.0	5179.0	5228.0	0
g	0	0	0	0	6955.0	6117.0	9561.0	178.0	501.0	19257.0	19878.0	0.0	19195.0	5550.0	7998.0	0
t	0	0	0	0	3490.0	4258.0	1982.0	441.0	4.0	193.0	32.0	19905.0	114.0	4685.0	3211.0	0
MA0124.2_rc_shift6 (Nkx3-1_rc) 
; oligos_6nt_mkv3_m23 versus MA0124.2_rc (Nkx3-1_rc); m=21/43; ncol2=9; w=9; offset=1; strand=R; shift=6; score=0.687301; ------tTAAGTGgy-
; cor=; Ncor=
a	0	0	0	0	0	0	1509.0	523.0	5335.0	5335.0	9.0	88.0	336.0	275.0	544.0	0
c	0	0	0	0	0	0	2132.0	173.0	0.0	0.0	9.0	10.0	10.0	1776.0	1361.0	0
g	0	0	0	0	0	0	1407.0	273.0	254.0	1.0	5335.0	28.0	5335.0	5335.0	991.0	0
t	0	0	0	0	0	0	5335.0	5335.0	0.0	0.0	59.0	5335.0	0.0	981.0	2438.0	0
MA0522.3_rc_shift4 (TCF3_rc) 
; oligos_6nt_mkv3_m23 versus MA0522.3_rc (TCF3_rc); m=22/43; ncol2=11; w=10; offset=-1; strand=R; shift=4; score=0.652244; ----ssGCAGGTGbs-
; cor=; Ncor=
a	0	0	0	0	6432.0	7233.0	1237.0	492.0	27539.0	283.0	950.0	375.0	705.0	4528.0	6240.0	0
c	0	0	0	0	9222.0	8025.0	987.0	28642.0	1339.0	2652.0	1362.0	1574.0	708.0	9432.0	8539.0	0
g	0	0	0	0	10122.0	8727.0	28742.0	1038.0	2003.0	27199.0	28640.0	396.0	29379.0	9269.0	10212.0	0
t	0	0	0	0	5485.0	7276.0	295.0	1089.0	380.0	1127.0	309.0	28916.0	469.0	8032.0	6270.0	0
MA0608.1_shift5 (Creb3l2) 
; oligos_6nt_mkv3_m23 versus MA0608.1 (Creb3l2); m=23/43; ncol2=9; w=9; offset=0; strand=D; shift=5; score=0.645647; -----KmCACGTGd--
; cor=; Ncor=
a	0	0	0	0	0	2.0	250.0	1.0	996.0	1.0	1.0	1.0	1.0	250.0	0	0
c	0	0	0	0	0	2.0	623.0	872.0	1.0	996.0	1.0	1.0	143.0	2.0	0	0
g	0	0	0	0	0	745.0	1.0	126.0	1.0	1.0	996.0	1.0	854.0	250.0	0	0
t	0	0	0	0	0	250.0	126.0	1.0	1.0	1.0	1.0	996.0	1.0	498.0	0	0
MA1648.1_rc_shift4 (TCF12(var.2)_rc) 
; oligos_6nt_mkv3_m23 versus MA1648.1_rc (TCF12(var.2)_rc); m=24/43; ncol2=11; w=10; offset=-1; strand=R; shift=4; score=0.643719; ----srGCAGGTGss-
; cor=; Ncor=
a	0	0	0	0	12248.0	16113.0	3412.0	1047.0	53985.0	662.0	1754.0	1733.0	1887.0	10887.0	12473.0	0
c	0	0	0	0	20060.0	14293.0	2314.0	55922.0	2625.0	3536.0	3780.0	5607.0	1186.0	18560.0	16996.0	0
g	0	0	0	0	18154.0	17603.0	55061.0	2088.0	3886.0	55765.0	55598.0	2007.0	57848.0	17594.0	19393.0	0
t	0	0	0	0	11414.0	13867.0	1089.0	2819.0	1380.0	1913.0	744.0	52529.0	955.0	14835.0	13014.0	0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc) 
; oligos_6nt_mkv3_m23 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=25/43; ncol2=12; w=10; offset=-1; strand=R; shift=4; score=0.619146; ----rmaCAGGTGtky
; cor=; Ncor=
a	0	0	0	0	2811.0	2745.0	6633.0	142.0	10014.0	129.0	426.0	114.0	107.0	826.0	1599.0	2324.0
c	0	0	0	0	2183.0	3341.0	1516.0	9972.0	98.0	294.0	1182.0	84.0	113.0	1410.0	2379.0	2664.0
g	0	0	0	0	3004.0	2527.0	1615.0	109.0	94.0	9612.0	8567.0	60.0	9887.0	1188.0	3700.0	2469.0
t	0	0	0	0	2293.0	1678.0	527.0	68.0	85.0	256.0	116.0	10033.0	184.0	6867.0	2613.0	2834.0
MA0147.3_shift4 (MYC) 
; oligos_6nt_mkv3_m23 versus MA0147.3 (MYC); m=26/43; ncol2=12; w=10; offset=-1; strand=D; shift=4; score=0.617556; ----ssCCACGTGcys
; cor=; Ncor=
a	0	0	0	0	1038.0	1019.0	438.0	44.0	4600.0	54.0	169.0	59.0	23.0	419.0	961.0	755.0
c	0	0	0	0	1345.0	1287.0	3746.0	4840.0	59.0	4525.0	157.0	162.0	56.0	2801.0	1524.0	1785.0
g	0	0	0	0	1649.0	1757.0	472.0	31.0	170.0	70.0	4578.0	63.0	4817.0	1198.0	1036.0	1348.0
t	0	0	0	0	910.0	879.0	286.0	27.0	113.0	293.0	38.0	4658.0	46.0	524.0	1421.0	1054.0
MA0622.1_shift6 (Mlxip) 
; oligos_6nt_mkv3_m23 versus MA0622.1 (Mlxip); m=27/43; ncol2=8; w=8; offset=1; strand=D; shift=6; score=0.611569; ------bCACGTGk--
; cor=; Ncor=
a	0	0	0	0	0	0	53.0	0.0	999.0	0.0	0.0	0.0	0.0	188.0	0	0
c	0	0	0	0	0	0	263.0	999.0	0.0	999.0	0.0	0.0	0.0	63.0	0	0
g	0	0	0	0	0	0	421.0	0.0	0.0	0.0	999.0	0.0	999.0	250.0	0	0
t	0	0	0	0	0	0	263.0	0.0	0.0	0.0	0.0	999.0	0.0	499.0	0	0
MA0104.4_shift4 (MYCN) 
; oligos_6nt_mkv3_m23 versus MA0104.4 (MYCN); m=28/43; ncol2=12; w=10; offset=-1; strand=D; shift=4; score=0.603094; ----sgCCACGTGGcs
; cor=; Ncor=
a	0	0	0	0	1488.0	1734.0	480.0	34.0	6369.0	22.0	323.0	274.0	7.0	420.0	1101.0	1148.0
c	0	0	0	0	1894.0	1550.0	5341.0	6929.0	56.0	6517.0	122.0	285.0	14.0	743.0	2599.0	2454.0
g	0	0	0	0	2454.0	2599.0	743.0	14.0	285.0	122.0	6517.0	56.0	6929.0	5341.0	1550.0	1894.0
t	0	0	0	0	1148.0	1101.0	420.0	7.0	274.0	323.0	22.0	6369.0	34.0	480.0	1734.0	1488.0
MA1524.1_shift4 (MSGN1) 
; oligos_6nt_mkv3_m23 versus MA1524.1 (MSGN1); m=29/43; ncol2=12; w=10; offset=-1; strand=D; shift=4; score=0.598727; ----srCCAwwTGkys
; cor=; Ncor=
a	0	0	0	0	1190.0	3096.0	663.0	0.0	6373.0	2424.0	3766.0	10.0	0.0	412.0	514.0	1388.0
c	0	0	0	0	2080.0	576.0	6373.0	6373.0	0.0	627.0	190.0	287.0	10.0	1132.0	3269.0	1976.0
g	0	0	0	0	1615.0	3277.0	1613.0	17.0	374.0	112.0	814.0	17.0	6373.0	3104.0	1503.0	1781.0
t	0	0	0	0	1488.0	408.0	726.0	0.0	0.0	3950.0	2607.0	6373.0	0.0	3269.0	3104.0	1228.0
MA0603.1_rc_shift6 (Arntl_rc) 
; oligos_6nt_mkv3_m23 versus MA0603.1_rc (Arntl_rc); m=30/43; ncol2=10; w=9; offset=1; strand=R; shift=6; score=0.588443; ------dCACGTGAch
; cor=; Ncor=
a	0	0	0	0	0	0	268.0	48.0	837.0	3.0	24.0	21.0	0.0	752.0	71.0	259.0
c	0	0	0	0	0	0	146.0	938.0	51.0	946.0	9.0	10.0	0.0	143.0	558.0	261.0
g	0	0	0	0	0	0	331.0	4.0	58.0	3.0	965.0	16.0	997.0	44.0	125.0	229.0
t	0	0	0	0	0	0	255.0	9.0	54.0	48.0	2.0	953.0	3.0	62.0	246.0	251.0
MA0914.1_rc_shift6 (ISL2_rc) 
; oligos_6nt_mkv3_m23 versus MA0914.1_rc (ISL2_rc); m=31/43; ncol2=8; w=8; offset=1; strand=R; shift=6; score=0.570029; ------yTAAkTGc--
; cor=; Ncor=
a	0	0	0	0	0	0	1508.0	1354.0	5631.0	5631.0	398.0	248.0	1019.0	1102.0	0	0
c	0	0	0	0	0	0	3258.0	59.0	13.0	169.0	171.0	134.0	126.0	5631.0	0	0
g	0	0	0	0	0	0	1231.0	206.0	718.0	130.0	5631.0	162.0	5631.0	2616.0	0	0
t	0	0	0	0	0	0	5631.0	5631.0	278.0	218.0	3161.0	5631.0	160.0	1585.0	0	0
MA0122.3_rc_shift5 (Nkx3-2_rc) 
; oligos_6nt_mkv3_m23 versus MA0122.3_rc (Nkx3-2_rc); m=32/43; ncol2=13; w=10; offset=0; strand=R; shift=5; score=0.566964; -----wtTAAGTGktt
; cor=; Ncor=
a	0	0	0	0	0	2890.0	2241.0	325.0	9919.0	10109.0	94.0	212.0	218.0	1033.0	2359.0	2088.0
c	0	0	0	0	0	1850.0	1368.0	68.0	68.0	29.0	10.0	19.0	23.0	1504.0	1154.0	1466.0
g	0	0	0	0	0	2083.0	991.0	147.0	138.0	32.0	9965.0	82.0	9900.0	5079.0	1109.0	952.0
t	0	0	0	0	0	3397.0	5620.0	9680.0	95.0	50.0	151.0	9907.0	79.0	2604.0	5598.0	5714.0
MA0831.2_shift7 (TFE3) 
; oligos_6nt_mkv3_m23 versus MA0831.2 (TFE3); m=33/43; ncol2=8; w=8; offset=2; strand=D; shift=7; score=0.564213; -------CACGTGAy-
; cor=; Ncor=
a	0	0	0	0	0	0	0	1.0	719.0	1.0	129.0	4.0	1.0	815.0	3.0	0
c	0	0	0	0	0	0	0	996.0	34.0	830.0	9.0	4.0	1.0	77.0	522.0	0
g	0	0	0	0	0	0	0	1.0	109.0	5.0	861.0	4.0	997.0	70.0	37.0	0
t	0	0	0	0	0	0	0	1.0	138.0	164.0	1.0	988.0	1.0	38.0	438.0	0
MA0830.2_rc_shift3 (TCF4_rc) 
; oligos_6nt_mkv3_m23 versus MA0830.2_rc (TCF4_rc); m=34/43; ncol2=13; w=10; offset=-2; strand=R; shift=3; score=0.562819; ---ssggCAGGTGccg
; cor=; Ncor=
a	0	0	0	6827.0	6430.0	6126.0	3555.0	242.0	27398.0	188.0	751.0	512.0	215.0	1737.0	7059.0	6225.0
c	0	0	0	7662.0	7964.0	4933.0	5281.0	28432.0	679.0	1197.0	1733.0	1295.0	321.0	18498.0	8618.0	7140.0
g	0	0	0	9843.0	8658.0	12872.0	18935.0	540.0	1016.0	27724.0	26765.0	635.0	28686.0	5062.0	6754.0	10052.0
t	0	0	0	5133.0	6413.0	5534.0	1694.0	251.0	372.0	356.0	216.0	27023.0	243.0	4168.0	7034.0	6048.0
MA0745.2_rc_shift3 (SNAI2_rc) 
; oligos_6nt_mkv3_m23 versus MA0745.2_rc (SNAI2_rc); m=35/43; ncol2=13; w=10; offset=-2; strand=R; shift=3; score=0.561196; ---rykACAGGTGcrt
; cor=; Ncor=
a	0	0	0	17906.0	8917.0	8747.0	37272.0	126.0	45229.0	344.0	234.0	227.0	622.0	2359.0	16344.0	9958.0
c	0	0	0	8219.0	12297.0	6281.0	1263.0	45257.0	196.0	487.0	326.0	424.0	323.0	26742.0	9490.0	11169.0
g	0	0	0	13476.0	11016.0	18771.0	6467.0	254.0	313.0	44739.0	45144.0	202.0	44463.0	6393.0	12314.0	10031.0
t	0	0	0	6215.0	13586.0	12017.0	814.0	179.0	78.0	246.0	112.0	44963.0	408.0	10322.0	7668.0	14658.0
MA1631.1_rc_shift3 (ASCL1(var.2)_rc) 
; oligos_6nt_mkv3_m23 versus MA1631.1_rc (ASCL1(var.2)_rc); m=36/43; ncol2=13; w=10; offset=-2; strand=R; shift=3; score=0.54503; ---gsrGCAGGTGchg
; cor=; Ncor=
a	0	0	0	8032.0	7779.0	9017.0	2394.0	249.0	32756.0	151.0	815.0	618.0	289.0	3290.0	8805.0	7347.0
c	0	0	0	8356.0	8939.0	2966.0	2719.0	33411.0	492.0	607.0	3209.0	860.0	321.0	18576.0	8601.0	8371.0
g	0	0	0	11996.0	10555.0	17883.0	28844.0	445.0	740.0	33402.0	30169.0	563.0	33562.0	6654.0	7998.0	11805.0
t	0	0	0	5972.0	7083.0	4490.0	399.0	251.0	368.0	196.0	163.0	32315.0	184.0	5836.0	8952.0	6833.0
MA1621.1_rc_shift3 (Rbpjl_rc) 
; oligos_6nt_mkv3_m23 versus MA1621.1_rc (Rbpjl_rc); m=37/43; ncol2=14; w=10; offset=-2; strand=R; shift=3; score=0.537465; ---grsaCAGGTGtkb
; cor=; Ncor=
a	0	0	0	2286.0	2537.0	2179.0	5784.0	124.0	9313.0	96.0	363.0	86.0	137.0	782.0	1364.0	2210.0
c	0	0	0	2281.0	1958.0	2687.0	1581.0	9295.0	132.0	317.0	672.0	110.0	103.0	1492.0	1802.0	2549.0
g	0	0	0	3003.0	2884.0	3247.0	1718.0	131.0	144.0	9005.0	8533.0	70.0	9273.0	1373.0	3117.0	2427.0
t	0	0	0	2082.0	2273.0	1539.0	569.0	102.0	63.0	234.0	84.0	9386.0	139.0	6005.0	3369.0	2466.0
MA0526.3_shift3 (USF2) 
; oligos_6nt_mkv3_m23 versus MA0526.3 (USF2); m=38/43; ncol2=14; w=10; offset=-2; strand=D; shift=3; score=0.505137; ---krGtCAyGTGACy
; cor=; Ncor=
a	0	0	0	9447.0	10547.0	6562.0	2754.0	365.0	36933.0	312.0	1744.0	357.0	336.0	31293.0	1448.0	7698.0
c	0	0	0	7703.0	5509.0	3199.0	6524.0	36957.0	546.0	10979.0	788.0	198.0	560.0	2132.0	28475.0	13806.0
g	0	0	0	9957.0	14329.0	26611.0	3097.0	525.0	329.0	1910.0	35413.0	498.0	36978.0	3248.0	2401.0	4691.0
t	0	0	0	11111.0	7833.0	1846.0	25843.0	371.0	410.0	25017.0	273.0	37165.0	344.0	1545.0	5894.0	12023.0
MA0806.1_shift8 (TBX4) 
; oligos_6nt_mkv3_m23 versus MA0806.1 (TBX4); m=39/43; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.472174; --------AGGTGTgA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	18646.0	3082.0	38.0	0.0	0.0	1551.0	1355.0	18646.0
c	0	0	0	0	0	0	0	0	437.0	2328.0	189.0	1644.0	0.0	2859.0	5396.0	588.0
g	0	0	0	0	0	0	0	0	2353.0	18646.0	18646.0	191.0	18646.0	304.0	18646.0	1733.0
t	0	0	0	0	0	0	0	0	1283.0	1162.0	33.0	18646.0	0.0	18646.0	8384.0	965.0
MA0807.1_shift8 (TBX5) 
; oligos_6nt_mkv3_m23 versus MA0807.1 (TBX5); m=40/43; ncol2=8; w=7; offset=3; strand=D; shift=8; score=0.458635; --------AGGTGTkA
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	1804.0	235.0	0.0	45.0	27.0	162.0	126.0	1804.0
c	0	0	0	0	0	0	0	0	89.0	190.0	0.0	131.0	0.0	225.0	616.0	76.0
g	0	0	0	0	0	0	0	0	409.0	1804.0	1804.0	166.0	1804.0	201.0	1804.0	343.0
t	0	0	0	0	0	0	0	0	207.0	133.0	28.0	1804.0	0.0	1804.0	915.0	283.0
MA0004.1_shift7 (Arnt) 
; oligos_6nt_mkv3_m23 versus MA0004.1 (Arnt); m=41/43; ncol2=6; w=6; offset=2; strand=D; shift=7; score=0.454812; -------CACGTG---
; cor=; Ncor=
a	0	0	0	0	0	0	0	4.0	19.0	0.0	0.0	0.0	0.0	0	0	0
c	0	0	0	0	0	0	0	16.0	0.0	20.0	0.0	0.0	0.0	0	0	0
g	0	0	0	0	0	0	0	0.0	1.0	0.0	20.0	0.0	20.0	0	0	0
t	0	0	0	0	0	0	0	0.0	0.0	0.0	0.0	20.0	0.0	0	0	0
MA0743.2_shift0 (SCRT1) 
; oligos_6nt_mkv3_m23 versus MA0743.2 (SCRT1); m=42/43; ncol2=16; w=10; offset=-5; strand=D; shift=0; score=0.438605; wawkCAACAGGTGgtw
; cor=; Ncor=
a	16320.0	22932.0	17036.0	4413.0	1456.0	45606.0	57271.0	213.0	58758.0	7017.0	1664.0	883.0	7813.0	10722.0	13382.0	16484.0
c	14118.0	10314.0	8693.0	7425.0	54835.0	8751.0	370.0	59557.0	234.0	557.0	466.0	1098.0	3296.0	8788.0	14903.0	12837.0
g	14307.0	14514.0	10154.0	16396.0	1297.0	1835.0	1566.0	224.0	159.0	51330.0	56500.0	259.0	41190.0	26973.0	13470.0	11049.0
t	15464.0	12449.0	24326.0	31975.0	2621.0	4017.0	1002.0	215.0	1058.0	1305.0	1579.0	57969.0	7910.0	13726.0	18454.0	19839.0
MA0161.2_rc_shift2 (NFIC_rc) 
; oligos_6nt_mkv3_m23 versus MA0161.2_rc (NFIC_rc); m=43/43; ncol2=11; w=8; offset=-3; strand=R; shift=2; score=0.433471; --tsTGCCAAGwa---
; cor=; Ncor=
a	0	0	2791.0	2844.0	574.0	530.0	290.0	81.0	10745.0	10781.0	324.0	3488.0	3867.0	0	0	0
c	0	0	2760.0	3186.0	478.0	88.0	10973.0	11087.0	177.0	369.0	329.0	2086.0	2478.0	0	0	0
g	0	0	2712.0	2951.0	397.0	10725.0	121.0	129.0	333.0	303.0	10542.0	2137.0	2647.0	0	0	0
t	0	0	3344.0	2626.0	10158.0	264.0	223.0	310.0	352.0	154.0	412.0	3896.0	2615.0	0	0	0