One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m25/peak-motifs_oligos_6nt_mkv3_m25.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m25/peak-motifs_oligos_6nt_mkv3_m25_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m25_shift2 ; 32 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m25_shift2 (oligos_6nt_mkv3_m25oligos_6nt_mkv3_m25)
; oligos_6nt_mkv3_m25 (oligos_6nt_mkv3_m25oligos_6nt_mkv3_m25); m=0 (reference); ncol1=11; shift=2; ncol=14; --rrCAGATGGcv- ; Alignment reference a 0 0 71 106 0 260 0 265 0 0 0 48 79 0 c 0 0 61 46 264 2 0 0 3 2 2 104 70 0 g 0 0 93 94 0 3 264 0 0 263 262 58 71 0 t 0 0 40 19 1 0 1 0 262 0 1 55 45 0

MA1638.1_shift2 (HAND2)
; oligos_6nt_mkv3_m25 versus MA1638.1 (HAND2); m=1/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.841177; --amCAGATGby-- ; cor=; Ncor= a 0 0 10136.0 8836.0 19.0 29222.0 12.0 30192.0 14.0 234.0 5217.0 6165.0 0 0 c 0 0 5564.0 11298.0 30062.0 410.0 42.0 30.0 2276.0 149.0 7690.0 10227.0 0 0 g 0 0 7463.0 6994.0 132.0 647.0 30144.0 38.0 31.0 29851.0 8878.0 6108.0 0 0 t 0 0 7120.0 3155.0 70.0 4.0 85.0 23.0 27962.0 49.0 8498.0 7783.0 0 0

MA1109.1_shift1 (NEUROD1)
; oligos_6nt_mkv3_m25 versus MA1109.1 (NEUROD1); m=2/31; ncol2=13; w=11; offset=-1; strand=D; shift=1; score=0.837455; -graCAGATGGyrs ; cor=; Ncor= a 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 538.0 c 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 591.0 g 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 628.0 t 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0 525.0

MA1642.1_shift0 (NEUROG2(var.2))
; oligos_6nt_mkv3_m25 versus MA1642.1 (NEUROG2(var.2)); m=3/31; ncol2=13; w=11; offset=-2; strand=D; shift=0; score=0.834399; rrraCAGATGGyv- ; cor=; Ncor= a 8690.0 9047.0 12089.0 16448.0 278.0 33720.0 400.0 32746.0 649.0 280.0 1523.0 6665.0 9464.0 0 c 7353.0 6843.0 6467.0 8154.0 33559.0 211.0 793.0 952.0 904.0 205.0 2966.0 10441.0 9034.0 0 g 10813.0 10123.0 11114.0 8039.0 317.0 301.0 30392.0 418.0 323.0 33422.0 24998.0 7581.0 8709.0 0 t 7535.0 8378.0 4721.0 1750.0 237.0 159.0 2806.0 275.0 32515.0 484.0 4904.0 9704.0 7184.0 0

MA0091.1_rc_shift2 (TAL1::TCF3_rc)
; oligos_6nt_mkv3_m25 versus MA0091.1_rc (TAL1::TCF3_rc); m=4/31; ncol2=12; w=11; offset=0; strand=R; shift=2; score=0.745653; --AmCAKMTGkTck ; cor=; Ncor= a 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 9.0 c 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 8.0 g 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 14.0 t 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0 13.0

MA0521.1_shift2 (Tcf12)
; oligos_6nt_mkv3_m25 versus MA0521.1 (Tcf12); m=5/31; ncol2=11; w=11; offset=0; strand=D; shift=2; score=0.735126; --rRCAGCTGswg- ; cor=; Ncor= a 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0

MA1618.1_shift1 (Ptf1a)
; oligos_6nt_mkv3_m25 versus MA1618.1 (Ptf1a); m=6/31; ncol2=13; w=11; offset=-1; strand=D; shift=1; score=0.730717; -dmaCAGATGttkh ; cor=; Ncor= a 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 3754.0 c 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 3689.0 g 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 3376.0 t 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0 3622.0

MA1524.1_rc_shift1 (MSGN1_rc)
; oligos_6nt_mkv3_m25 versus MA1524.1_rc (MSGN1_rc); m=7/31; ncol2=12; w=11; offset=-1; strand=R; shift=1; score=0.722928; -srmCAwwTGGys- ; cor=; Ncor= a 0 1228.0 3104.0 3269.0 0.0 6373.0 2607.0 3950.0 0.0 0.0 726.0 408.0 1488.0 0 c 0 1781.0 1503.0 3104.0 6373.0 17.0 814.0 112.0 374.0 17.0 1613.0 3277.0 1615.0 0 g 0 1976.0 3269.0 1132.0 10.0 287.0 190.0 627.0 0.0 6373.0 6373.0 576.0 2080.0 0 t 0 1388.0 514.0 412.0 0.0 10.0 3766.0 2424.0 6373.0 0.0 663.0 3096.0 1190.0 0

MA1472.1_rc_shift2 (BHLHA15(var.2)_rc)
; oligos_6nt_mkv3_m25 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=8/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.699983; --rrCAGCTGbt-- ; cor=; Ncor= a 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 c 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 g 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 t 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0

MA0633.1_rc_shift2 (Twist2_rc)
; oligos_6nt_mkv3_m25 versus MA0633.1_rc (Twist2_rc); m=9/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.697346; --mACATATGky-- ; cor=; Ncor= a 0 0 365.0 745.0 0.0 1000.0 0.0 783.0 0.0 0.0 69.0 200.0 0 0 c 0 0 272.0 155.0 1000.0 0.0 211.0 0.0 0.0 0.0 69.0 298.0 0 0 g 0 0 181.0 50.0 0.0 0.0 0.0 217.0 0.0 1000.0 580.0 200.0 0 0 t 0 0 181.0 50.0 0.0 0.0 789.0 0.0 1000.0 0.0 282.0 302.0 0 0

MA1123.2_shift0 (TWIST1)
; oligos_6nt_mkv3_m25 versus MA1123.2 (TWIST1); m=10/31; ncol2=13; w=11; offset=-2; strand=D; shift=0; score=0.692527; awwCCAGATGtbt- ; cor=; Ncor= a 8329.0 7822.0 7536.0 3733.0 377.0 26713.0 440.0 24524.0 357.0 380.0 1801.0 4070.0 6823.0 0 c 5761.0 5530.0 4597.0 20412.0 26665.0 136.0 1320.0 1687.0 456.0 396.0 2919.0 7402.0 6561.0 0 g 6485.0 5722.0 5772.0 2336.0 117.0 210.0 24166.0 908.0 288.0 25975.0 4069.0 7273.0 6213.0 0 t 6758.0 8259.0 9428.0 852.0 174.0 274.0 1407.0 214.0 26232.0 582.0 18544.0 8588.0 7736.0 0

MA0461.2_shift2 (Atoh1)
; oligos_6nt_mkv3_m25 versus MA0461.2 (Atoh1); m=11/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.687623; --rmCATATGky-- ; cor=; Ncor= a 0 0 655.0 523.0 42.0 1027.0 17.0 1027.0 22.0 2.0 34.0 128.0 0 0 c 0 0 108.0 334.0 1027.0 20.0 10.0 74.0 4.0 1.0 234.0 494.0 0 0 g 0 0 372.0 149.0 8.0 34.0 136.0 0.0 5.0 1027.0 376.0 126.0 0 0 t 0 0 59.0 21.0 0.0 0.0 1027.0 0.0 1027.0 31.0 384.0 533.0 0 0

MA1568.1_rc_shift1 (TCF21(var.2)_rc)
; oligos_6nt_mkv3_m25 versus MA1568.1_rc (TCF21(var.2)_rc); m=12/31; ncol2=12; w=11; offset=-1; strand=R; shift=1; score=0.685516; -yrmCATATGGtg- ; cor=; Ncor= a 0 105.0 431.0 339.0 18.0 872.0 0.0 872.0 14.0 2.0 28.0 194.0 186.0 0 c 0 315.0 6.0 533.0 872.0 0.0 71.0 67.0 164.0 12.0 205.0 352.0 175.0 0 g 0 150.0 441.0 86.0 0.0 107.0 43.0 54.0 0.0 872.0 872.0 20.0 398.0 0 t 0 301.0 87.0 19.0 4.0 21.0 872.0 0.0 872.0 4.0 89.0 872.0 113.0 0

MA0668.1_rc_shift2 (NEUROD2_rc)
; oligos_6nt_mkv3_m25 versus MA0668.1_rc (NEUROD2_rc); m=13/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.681899; --rmCATATGky-- ; cor=; Ncor= a 0 0 685.0 548.0 112.0 1587.0 4.0 1587.0 52.0 0.0 0.0 95.0 0 0 c 0 0 101.0 705.0 1587.0 0.0 38.0 0.0 308.0 95.0 240.0 769.0 0 0 g 0 0 592.0 373.0 0.0 328.0 120.0 156.0 0.0 1587.0 875.0 119.0 0 0 t 0 0 209.0 0.0 0.0 0.0 1587.0 0.0 1587.0 0.0 527.0 604.0 0 0

MA1468.1_rc_shift2 (ATOH7_rc)
; oligos_6nt_mkv3_m25 versus MA1468.1_rc (ATOH7_rc); m=14/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.665463; --rmCATATGkT-- ; cor=; Ncor= a 0 0 312.0 291.0 0.0 712.0 0.0 712.0 58.0 0.0 45.0 62.0 0 0 c 0 0 2.0 261.0 712.0 25.0 78.0 59.0 102.0 0.0 154.0 142.0 0 0 g 0 0 400.0 155.0 0.0 25.0 180.0 106.0 0.0 712.0 211.0 97.0 0 0 t 0 0 17.0 5.0 0.0 0.0 712.0 15.0 712.0 0.0 302.0 712.0 0 0

MA1570.1_shift2 (TFAP4(var.2))
; oligos_6nt_mkv3_m25 versus MA1570.1 (TFAP4(var.2)); m=15/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.664753; --ahCAyrTGkt-- ; cor=; Ncor= a 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 0 c 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 0 g 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 0 t 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0 0

MA0820.1_rc_shift2 (FIGLA_rc)
; oligos_6nt_mkv3_m25 versus MA0820.1_rc (FIGLA_rc); m=16/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.661516; --wmCAGGTGkw-- ; cor=; Ncor= a 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 0 c 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 0 g 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 0 t 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0 0

MA1108.2_shift2 (MXI1)
; oligos_6nt_mkv3_m25 versus MA1108.2 (MXI1); m=17/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.660533; --rvCACATGkc-- ; cor=; Ncor= a 0 0 5786.0 6184.0 109.0 21870.0 10.0 20506.0 0.0 527.0 2833.0 4945.0 0 0 c 0 0 4724.0 5841.0 21382.0 1.0 21552.0 0.0 507.0 114.0 5329.0 6343.0 0 0 g 0 0 6326.0 6078.0 97.0 170.0 18.0 1542.0 0.0 21232.0 7228.0 5394.0 0 0 t 0 0 5212.0 3945.0 460.0 7.0 468.0 0.0 21541.0 175.0 6658.0 5366.0 0 0

MA1100.2_shift2 (ASCL1)
; oligos_6nt_mkv3_m25 versus MA1100.2 (ASCL1); m=18/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.651989; --rrCAGCTGcy-- ; cor=; Ncor= a 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0

MA1635.1_shift2 (BHLHE22(var.2))
; oligos_6nt_mkv3_m25 versus MA1635.1 (BHLHE22(var.2)); m=19/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.650684; --csCAGCTGsg-- ; cor=; Ncor= a 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 c 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 g 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 t 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0

MA0827.1_rc_shift2 (OLIG3_rc)
; oligos_6nt_mkv3_m25 versus MA0827.1_rc (OLIG3_rc); m=20/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.650128; --rvCATATGkT-- ; cor=; Ncor= a 0 0 1915.0 1010.0 275.0 1915.0 0.0 1915.0 22.0 3.0 6.0 132.0 0 0 c 0 0 176.0 904.0 1915.0 2.0 11.0 72.0 99.0 0.0 208.0 427.0 0 0 g 0 0 964.0 662.0 4.0 224.0 103.0 26.0 10.0 1915.0 1115.0 204.0 0 0 t 0 0 265.0 28.0 4.0 56.0 1915.0 0.0 1915.0 222.0 800.0 1915.0 0 0

MA0100.3_rc_shift2 (MYB_rc)
; oligos_6nt_mkv3_m25 versus MA0100.3_rc (MYB_rc); m=21/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.647301; --kdCAGTTGvk-- ; cor=; Ncor= a 0 0 352.0 497.0 0.0 1398.0 0.0 6.0 7.0 9.0 410.0 380.0 0 0 c 0 0 225.0 147.0 1516.0 68.0 0.0 0.0 39.0 5.0 397.0 300.0 0 0 g 0 0 528.0 482.0 3.0 60.0 1527.0 2.0 3.0 1513.0 428.0 422.0 0 0 t 0 0 422.0 401.0 8.0 1.0 0.0 1519.0 1478.0 0.0 292.0 425.0 0 0

MA0818.1_rc_shift2 (BHLHE22_rc)
; oligos_6nt_mkv3_m25 versus MA0818.1_rc (BHLHE22_rc); m=22/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.644857; --rrCATATGkT-- ; cor=; Ncor= a 0 0 520.0 201.0 4.0 520.0 2.0 520.0 8.0 0.0 4.0 21.0 0 0 c 0 0 21.0 123.0 520.0 0.0 2.0 0.0 24.0 0.0 99.0 172.0 0 0 g 0 0 254.0 193.0 2.0 48.0 4.0 2.0 6.0 520.0 229.0 26.0 0 0 t 0 0 36.0 4.0 0.0 11.0 520.0 0.0 520.0 6.0 189.0 520.0 0 0

MA0678.1_rc_shift2 (OLIG2_rc)
; oligos_6nt_mkv3_m25 versus MA0678.1_rc (OLIG2_rc); m=23/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.63765; --rmCATATGkT-- ; cor=; Ncor= a 0 0 1609.0 744.0 117.0 1609.0 4.0 1609.0 22.0 0.0 16.0 108.0 0 0 c 0 0 57.0 866.0 1609.0 0.0 18.0 0.0 53.0 4.0 142.0 283.0 0 0 g 0 0 689.0 396.0 3.0 159.0 22.0 0.0 2.0 1609.0 929.0 90.0 0 0 t 0 0 146.0 4.0 10.0 21.0 1609.0 0.0 1609.0 74.0 680.0 1609.0 0 0

MA0623.2_shift2 (NEUROG1)
; oligos_6nt_mkv3_m25 versus MA0623.2 (NEUROG1); m=24/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.636787; --raCATATGky-- ; cor=; Ncor= a 0 0 1658.0 1898.0 0.0 3518.0 4.0 3518.0 0.0 0.0 23.0 68.0 0 0 c 0 0 118.0 876.0 3518.0 0.0 114.0 0.0 86.0 0.0 655.0 1844.0 0 0 g 0 0 1860.0 729.0 8.0 63.0 0.0 80.0 0.0 3518.0 907.0 187.0 0 0 t 0 0 33.0 14.0 0.0 0.0 3518.0 0.0 3518.0 0.0 1933.0 1673.0 0 0

MA0698.1_shift0 (ZBTB18)
; oligos_6nt_mkv3_m25 versus MA0698.1 (ZBTB18); m=25/31; ncol2=13; w=11; offset=-2; strand=D; shift=0; score=0.613061; hatCCAGATGTkb- ; cor=; Ncor= a 3561.0 7064.0 1177.0 3618.0 21.0 13670.0 3.0 13670.0 14.0 3.0 48.0 210.0 1725.0 0 c 4188.0 753.0 1937.0 13670.0 13670.0 5.0 245.0 1048.0 15.0 1.0 314.0 177.0 4042.0 0 g 2499.0 2535.0 5212.0 1899.0 3.0 33.0 13670.0 278.0 94.0 13670.0 36.0 5530.0 3876.0 0 t 3423.0 3319.0 13670.0 60.0 8.0 206.0 6.0 297.0 13670.0 1.0 13670.0 8140.0 4027.0 0

MA0607.1_rc_shift3 (Bhlha15_rc)
; oligos_6nt_mkv3_m25 versus MA0607.1_rc (Bhlha15_rc); m=26/31; ncol2=8; w=8; offset=1; strand=R; shift=3; score=0.600636; ---aCATATGs--- ; cor=; Ncor= a 0 0 0 614.0 0.0 999.0 0.0 799.0 0.0 0.0 1.0 0 0 0 c 0 0 0 154.0 999.0 0.0 0.0 200.0 0.0 0.0 286.0 0 0 0 g 0 0 0 231.0 0.0 0.0 200.0 0.0 0.0 999.0 571.0 0 0 0 t 0 0 0 1.0 0.0 0.0 799.0 0.0 999.0 0.0 143.0 0 0 0

MA0103.3_rc_shift1 (ZEB1_rc)
; oligos_6nt_mkv3_m25 versus MA0103.3_rc (ZEB1_rc); m=27/31; ncol2=11; w=10; offset=-1; strand=R; shift=1; score=0.591097; -sssCAGGTGss-- ; cor=; Ncor= a 0 3856.0 3153.0 3408.0 129.0 19269.0 30.0 122.0 1.0 662.0 4715.0 3692.0 0 0 c 0 5828.0 6601.0 5178.0 19381.0 355.0 649.0 97.0 223.0 158.0 5179.0 5228.0 0 0 g 0 6955.0 6117.0 9561.0 178.0 501.0 19257.0 19878.0 0.0 19195.0 5550.0 7998.0 0 0 t 0 3490.0 4258.0 1982.0 441.0 4.0 193.0 32.0 19905.0 114.0 4685.0 3211.0 0 0

MA1485.1_rc_shift0 (FERD3L_rc)
; oligos_6nt_mkv3_m25 versus MA1485.1_rc (FERD3L_rc); m=28/31; ncol2=14; w=11; offset=-2; strand=R; shift=0; score=0.569324; GTrACAGCTGkyrC ; cor=; Ncor= a 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 225.0 c 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 29605.0 g 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 68.0 t 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0 2158.0

MA0095.2_shift3 (YY1)
; oligos_6nt_mkv3_m25 versus MA0095.2 (YY1); m=29/31; ncol2=12; w=10; offset=1; strand=D; shift=3; score=0.546367; ---cAArATGGCkg ; cor=; Ncor= a 0 0 0 1126.0 6975.0 6741.0 2506.0 7171.0 0.0 11.0 13.0 812.0 867.0 899.0 c 0 0 0 4583.0 0.0 99.0 1117.0 0.0 12.0 0.0 0.0 5637.0 1681.0 875.0 g 0 0 0 801.0 181.0 268.0 3282.0 0.0 0.0 7160.0 7158.0 38.0 2765.0 4655.0 t 0 0 0 661.0 15.0 63.0 266.0 0.0 7159.0 0.0 0.0 684.0 1858.0 742.0

MA0092.1_rc_shift0 (Hand1::Tcf3_rc)
; oligos_6nt_mkv3_m25 versus MA0092.1_rc (Hand1::Tcf3_rc); m=30/31; ncol2=10; w=8; offset=-2; strand=R; shift=0; score=0.448466; awkCCAGAys---- ; cor=; Ncor= a 16.0 10.0 5.0 1.0 0.0 29.0 1.0 24.0 4.0 7.0 0 0 0 0 c 4.0 3.0 1.0 25.0 29.0 0.0 0.0 1.0 15.0 10.0 0 0 0 0 g 4.0 0.0 14.0 3.0 0.0 0.0 28.0 2.0 0.0 8.0 0 0 0 0 t 5.0 16.0 9.0 0.0 0.0 0.0 0.0 2.0 10.0 4.0 0 0 0 0

MA0748.2_shift5 (YY2)
; oligos_6nt_mkv3_m25 versus MA0748.2 (YY2); m=31/31; ncol2=11; w=8; offset=3; strand=D; shift=5; score=0.429285; -----msATGGCGG ; cor=; Ncor= a 0 0 0 0 0 1973.0 1280.0 5263.0 58.0 48.0 126.0 109.0 64.0 411.0 c 0 0 0 0 0 1591.0 1607.0 46.0 273.0 120.0 101.0 5384.0 330.0 516.0 g 0 0 0 0 0 1068.0 2143.0 359.0 125.0 5509.0 5376.0 25.0 5231.0 4474.0 t 0 0 0 0 0 1072.0 674.0 36.0 5248.0 27.0 101.0 186.0 79.0 303.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv3_m25_shift2 (oligos_6nt_mkv3_m25oligos_6nt_mkv3_m25)				; oligos_6nt_mkv3_m25 (oligos_6nt_mkv3_m25oligos_6nt_mkv3_m25); m=0 (reference); ncol1=11; shift=2; ncol=14; --rrCAGATGGcv- ; Alignment reference a 0 0 71 106 0 260 0 265 0 0 0 48 79 0 c 0 0 61 46 264 2 0 0 3 2 2 104 70 0 g 0 0 93 94 0 3 264 0 0 263 262 58 71 0 t 0 0 40 19 1 0 1 0 262 0 1 55 45 0
MA1638.1_shift2 (HAND2)				; oligos_6nt_mkv3_m25 versus MA1638.1 (HAND2); m=1/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.841177; --amCAGATGby-- ; cor=; Ncor= a 0 0 10136.0 8836.0 19.0 29222.0 12.0 30192.0 14.0 234.0 5217.0 6165.0 0 0 c 0 0 5564.0 11298.0 30062.0 410.0 42.0 30.0 2276.0 149.0 7690.0 10227.0 0 0 g 0 0 7463.0 6994.0 132.0 647.0 30144.0 38.0 31.0 29851.0 8878.0 6108.0 0 0 t 0 0 7120.0 3155.0 70.0 4.0 85.0 23.0 27962.0 49.0 8498.0 7783.0 0 0
MA1109.1_shift1 (NEUROD1)				; oligos_6nt_mkv3_m25 versus MA1109.1 (NEUROD1); m=2/31; ncol2=13; w=11; offset=-1; strand=D; shift=1; score=0.837455; -graCAGATGGyrs ; cor=; Ncor= a 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 538.0 c 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 591.0 g 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 628.0 t 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0 525.0
MA1642.1_shift0 (NEUROG2(var.2))				; oligos_6nt_mkv3_m25 versus MA1642.1 (NEUROG2(var.2)); m=3/31; ncol2=13; w=11; offset=-2; strand=D; shift=0; score=0.834399; rrraCAGATGGyv- ; cor=; Ncor= a 8690.0 9047.0 12089.0 16448.0 278.0 33720.0 400.0 32746.0 649.0 280.0 1523.0 6665.0 9464.0 0 c 7353.0 6843.0 6467.0 8154.0 33559.0 211.0 793.0 952.0 904.0 205.0 2966.0 10441.0 9034.0 0 g 10813.0 10123.0 11114.0 8039.0 317.0 301.0 30392.0 418.0 323.0 33422.0 24998.0 7581.0 8709.0 0 t 7535.0 8378.0 4721.0 1750.0 237.0 159.0 2806.0 275.0 32515.0 484.0 4904.0 9704.0 7184.0 0
MA0091.1_rc_shift2 (TAL1::TCF3_rc)				; oligos_6nt_mkv3_m25 versus MA0091.1_rc (TAL1::TCF3_rc); m=4/31; ncol2=12; w=11; offset=0; strand=R; shift=2; score=0.745653; --AmCAKMTGkTck ; cor=; Ncor= a 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 9.0 c 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 8.0 g 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 14.0 t 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0 13.0
MA0521.1_shift2 (Tcf12)				; oligos_6nt_mkv3_m25 versus MA0521.1 (Tcf12); m=5/31; ncol2=11; w=11; offset=0; strand=D; shift=2; score=0.735126; --rRCAGCTGswg- ; cor=; Ncor= a 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 c 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 g 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 t 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0
MA1618.1_shift1 (Ptf1a)				; oligos_6nt_mkv3_m25 versus MA1618.1 (Ptf1a); m=6/31; ncol2=13; w=11; offset=-1; strand=D; shift=1; score=0.730717; -dmaCAGATGttkh ; cor=; Ncor= a 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 3754.0 c 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 3689.0 g 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 3376.0 t 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0 3622.0
MA1524.1_rc_shift1 (MSGN1_rc)				; oligos_6nt_mkv3_m25 versus MA1524.1_rc (MSGN1_rc); m=7/31; ncol2=12; w=11; offset=-1; strand=R; shift=1; score=0.722928; -srmCAwwTGGys- ; cor=; Ncor= a 0 1228.0 3104.0 3269.0 0.0 6373.0 2607.0 3950.0 0.0 0.0 726.0 408.0 1488.0 0 c 0 1781.0 1503.0 3104.0 6373.0 17.0 814.0 112.0 374.0 17.0 1613.0 3277.0 1615.0 0 g 0 1976.0 3269.0 1132.0 10.0 287.0 190.0 627.0 0.0 6373.0 6373.0 576.0 2080.0 0 t 0 1388.0 514.0 412.0 0.0 10.0 3766.0 2424.0 6373.0 0.0 663.0 3096.0 1190.0 0
MA1472.1_rc_shift2 (BHLHA15(var.2)_rc)				; oligos_6nt_mkv3_m25 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=8/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.699983; --rrCAGCTGbt-- ; cor=; Ncor= a 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 c 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 g 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 t 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0
MA0633.1_rc_shift2 (Twist2_rc)				; oligos_6nt_mkv3_m25 versus MA0633.1_rc (Twist2_rc); m=9/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.697346; --mACATATGky-- ; cor=; Ncor= a 0 0 365.0 745.0 0.0 1000.0 0.0 783.0 0.0 0.0 69.0 200.0 0 0 c 0 0 272.0 155.0 1000.0 0.0 211.0 0.0 0.0 0.0 69.0 298.0 0 0 g 0 0 181.0 50.0 0.0 0.0 0.0 217.0 0.0 1000.0 580.0 200.0 0 0 t 0 0 181.0 50.0 0.0 0.0 789.0 0.0 1000.0 0.0 282.0 302.0 0 0
MA1123.2_shift0 (TWIST1)				; oligos_6nt_mkv3_m25 versus MA1123.2 (TWIST1); m=10/31; ncol2=13; w=11; offset=-2; strand=D; shift=0; score=0.692527; awwCCAGATGtbt- ; cor=; Ncor= a 8329.0 7822.0 7536.0 3733.0 377.0 26713.0 440.0 24524.0 357.0 380.0 1801.0 4070.0 6823.0 0 c 5761.0 5530.0 4597.0 20412.0 26665.0 136.0 1320.0 1687.0 456.0 396.0 2919.0 7402.0 6561.0 0 g 6485.0 5722.0 5772.0 2336.0 117.0 210.0 24166.0 908.0 288.0 25975.0 4069.0 7273.0 6213.0 0 t 6758.0 8259.0 9428.0 852.0 174.0 274.0 1407.0 214.0 26232.0 582.0 18544.0 8588.0 7736.0 0
MA0461.2_shift2 (Atoh1)				; oligos_6nt_mkv3_m25 versus MA0461.2 (Atoh1); m=11/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.687623; --rmCATATGky-- ; cor=; Ncor= a 0 0 655.0 523.0 42.0 1027.0 17.0 1027.0 22.0 2.0 34.0 128.0 0 0 c 0 0 108.0 334.0 1027.0 20.0 10.0 74.0 4.0 1.0 234.0 494.0 0 0 g 0 0 372.0 149.0 8.0 34.0 136.0 0.0 5.0 1027.0 376.0 126.0 0 0 t 0 0 59.0 21.0 0.0 0.0 1027.0 0.0 1027.0 31.0 384.0 533.0 0 0
MA1568.1_rc_shift1 (TCF21(var.2)_rc)				; oligos_6nt_mkv3_m25 versus MA1568.1_rc (TCF21(var.2)_rc); m=12/31; ncol2=12; w=11; offset=-1; strand=R; shift=1; score=0.685516; -yrmCATATGGtg- ; cor=; Ncor= a 0 105.0 431.0 339.0 18.0 872.0 0.0 872.0 14.0 2.0 28.0 194.0 186.0 0 c 0 315.0 6.0 533.0 872.0 0.0 71.0 67.0 164.0 12.0 205.0 352.0 175.0 0 g 0 150.0 441.0 86.0 0.0 107.0 43.0 54.0 0.0 872.0 872.0 20.0 398.0 0 t 0 301.0 87.0 19.0 4.0 21.0 872.0 0.0 872.0 4.0 89.0 872.0 113.0 0
MA0668.1_rc_shift2 (NEUROD2_rc)				; oligos_6nt_mkv3_m25 versus MA0668.1_rc (NEUROD2_rc); m=13/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.681899; --rmCATATGky-- ; cor=; Ncor= a 0 0 685.0 548.0 112.0 1587.0 4.0 1587.0 52.0 0.0 0.0 95.0 0 0 c 0 0 101.0 705.0 1587.0 0.0 38.0 0.0 308.0 95.0 240.0 769.0 0 0 g 0 0 592.0 373.0 0.0 328.0 120.0 156.0 0.0 1587.0 875.0 119.0 0 0 t 0 0 209.0 0.0 0.0 0.0 1587.0 0.0 1587.0 0.0 527.0 604.0 0 0
MA1468.1_rc_shift2 (ATOH7_rc)				; oligos_6nt_mkv3_m25 versus MA1468.1_rc (ATOH7_rc); m=14/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.665463; --rmCATATGkT-- ; cor=; Ncor= a 0 0 312.0 291.0 0.0 712.0 0.0 712.0 58.0 0.0 45.0 62.0 0 0 c 0 0 2.0 261.0 712.0 25.0 78.0 59.0 102.0 0.0 154.0 142.0 0 0 g 0 0 400.0 155.0 0.0 25.0 180.0 106.0 0.0 712.0 211.0 97.0 0 0 t 0 0 17.0 5.0 0.0 0.0 712.0 15.0 712.0 0.0 302.0 712.0 0 0
MA1570.1_shift2 (TFAP4(var.2))				; oligos_6nt_mkv3_m25 versus MA1570.1 (TFAP4(var.2)); m=15/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.664753; --ahCAyrTGkt-- ; cor=; Ncor= a 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 0 c 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 0 g 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 0 t 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0 0
MA0820.1_rc_shift2 (FIGLA_rc)				; oligos_6nt_mkv3_m25 versus MA0820.1_rc (FIGLA_rc); m=16/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.661516; --wmCAGGTGkw-- ; cor=; Ncor= a 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 0 c 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 0 g 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 0 t 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0 0
MA1108.2_shift2 (MXI1)				; oligos_6nt_mkv3_m25 versus MA1108.2 (MXI1); m=17/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.660533; --rvCACATGkc-- ; cor=; Ncor= a 0 0 5786.0 6184.0 109.0 21870.0 10.0 20506.0 0.0 527.0 2833.0 4945.0 0 0 c 0 0 4724.0 5841.0 21382.0 1.0 21552.0 0.0 507.0 114.0 5329.0 6343.0 0 0 g 0 0 6326.0 6078.0 97.0 170.0 18.0 1542.0 0.0 21232.0 7228.0 5394.0 0 0 t 0 0 5212.0 3945.0 460.0 7.0 468.0 0.0 21541.0 175.0 6658.0 5366.0 0 0
MA1100.2_shift2 (ASCL1)				; oligos_6nt_mkv3_m25 versus MA1100.2 (ASCL1); m=18/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.651989; --rrCAGCTGcy-- ; cor=; Ncor= a 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 c 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 g 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 t 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0
MA1635.1_shift2 (BHLHE22(var.2))				; oligos_6nt_mkv3_m25 versus MA1635.1 (BHLHE22(var.2)); m=19/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.650684; --csCAGCTGsg-- ; cor=; Ncor= a 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 c 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 g 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 t 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0
MA0827.1_rc_shift2 (OLIG3_rc)				; oligos_6nt_mkv3_m25 versus MA0827.1_rc (OLIG3_rc); m=20/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.650128; --rvCATATGkT-- ; cor=; Ncor= a 0 0 1915.0 1010.0 275.0 1915.0 0.0 1915.0 22.0 3.0 6.0 132.0 0 0 c 0 0 176.0 904.0 1915.0 2.0 11.0 72.0 99.0 0.0 208.0 427.0 0 0 g 0 0 964.0 662.0 4.0 224.0 103.0 26.0 10.0 1915.0 1115.0 204.0 0 0 t 0 0 265.0 28.0 4.0 56.0 1915.0 0.0 1915.0 222.0 800.0 1915.0 0 0
MA0100.3_rc_shift2 (MYB_rc)				; oligos_6nt_mkv3_m25 versus MA0100.3_rc (MYB_rc); m=21/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.647301; --kdCAGTTGvk-- ; cor=; Ncor= a 0 0 352.0 497.0 0.0 1398.0 0.0 6.0 7.0 9.0 410.0 380.0 0 0 c 0 0 225.0 147.0 1516.0 68.0 0.0 0.0 39.0 5.0 397.0 300.0 0 0 g 0 0 528.0 482.0 3.0 60.0 1527.0 2.0 3.0 1513.0 428.0 422.0 0 0 t 0 0 422.0 401.0 8.0 1.0 0.0 1519.0 1478.0 0.0 292.0 425.0 0 0
MA0818.1_rc_shift2 (BHLHE22_rc)				; oligos_6nt_mkv3_m25 versus MA0818.1_rc (BHLHE22_rc); m=22/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.644857; --rrCATATGkT-- ; cor=; Ncor= a 0 0 520.0 201.0 4.0 520.0 2.0 520.0 8.0 0.0 4.0 21.0 0 0 c 0 0 21.0 123.0 520.0 0.0 2.0 0.0 24.0 0.0 99.0 172.0 0 0 g 0 0 254.0 193.0 2.0 48.0 4.0 2.0 6.0 520.0 229.0 26.0 0 0 t 0 0 36.0 4.0 0.0 11.0 520.0 0.0 520.0 6.0 189.0 520.0 0 0
MA0678.1_rc_shift2 (OLIG2_rc)				; oligos_6nt_mkv3_m25 versus MA0678.1_rc (OLIG2_rc); m=23/31; ncol2=10; w=10; offset=0; strand=R; shift=2; score=0.63765; --rmCATATGkT-- ; cor=; Ncor= a 0 0 1609.0 744.0 117.0 1609.0 4.0 1609.0 22.0 0.0 16.0 108.0 0 0 c 0 0 57.0 866.0 1609.0 0.0 18.0 0.0 53.0 4.0 142.0 283.0 0 0 g 0 0 689.0 396.0 3.0 159.0 22.0 0.0 2.0 1609.0 929.0 90.0 0 0 t 0 0 146.0 4.0 10.0 21.0 1609.0 0.0 1609.0 74.0 680.0 1609.0 0 0
MA0623.2_shift2 (NEUROG1)				; oligos_6nt_mkv3_m25 versus MA0623.2 (NEUROG1); m=24/31; ncol2=10; w=10; offset=0; strand=D; shift=2; score=0.636787; --raCATATGky-- ; cor=; Ncor= a 0 0 1658.0 1898.0 0.0 3518.0 4.0 3518.0 0.0 0.0 23.0 68.0 0 0 c 0 0 118.0 876.0 3518.0 0.0 114.0 0.0 86.0 0.0 655.0 1844.0 0 0 g 0 0 1860.0 729.0 8.0 63.0 0.0 80.0 0.0 3518.0 907.0 187.0 0 0 t 0 0 33.0 14.0 0.0 0.0 3518.0 0.0 3518.0 0.0 1933.0 1673.0 0 0
MA0698.1_shift0 (ZBTB18)				; oligos_6nt_mkv3_m25 versus MA0698.1 (ZBTB18); m=25/31; ncol2=13; w=11; offset=-2; strand=D; shift=0; score=0.613061; hatCCAGATGTkb- ; cor=; Ncor= a 3561.0 7064.0 1177.0 3618.0 21.0 13670.0 3.0 13670.0 14.0 3.0 48.0 210.0 1725.0 0 c 4188.0 753.0 1937.0 13670.0 13670.0 5.0 245.0 1048.0 15.0 1.0 314.0 177.0 4042.0 0 g 2499.0 2535.0 5212.0 1899.0 3.0 33.0 13670.0 278.0 94.0 13670.0 36.0 5530.0 3876.0 0 t 3423.0 3319.0 13670.0 60.0 8.0 206.0 6.0 297.0 13670.0 1.0 13670.0 8140.0 4027.0 0
MA0607.1_rc_shift3 (Bhlha15_rc)				; oligos_6nt_mkv3_m25 versus MA0607.1_rc (Bhlha15_rc); m=26/31; ncol2=8; w=8; offset=1; strand=R; shift=3; score=0.600636; ---aCATATGs--- ; cor=; Ncor= a 0 0 0 614.0 0.0 999.0 0.0 799.0 0.0 0.0 1.0 0 0 0 c 0 0 0 154.0 999.0 0.0 0.0 200.0 0.0 0.0 286.0 0 0 0 g 0 0 0 231.0 0.0 0.0 200.0 0.0 0.0 999.0 571.0 0 0 0 t 0 0 0 1.0 0.0 0.0 799.0 0.0 999.0 0.0 143.0 0 0 0
MA0103.3_rc_shift1 (ZEB1_rc)				; oligos_6nt_mkv3_m25 versus MA0103.3_rc (ZEB1_rc); m=27/31; ncol2=11; w=10; offset=-1; strand=R; shift=1; score=0.591097; -sssCAGGTGss-- ; cor=; Ncor= a 0 3856.0 3153.0 3408.0 129.0 19269.0 30.0 122.0 1.0 662.0 4715.0 3692.0 0 0 c 0 5828.0 6601.0 5178.0 19381.0 355.0 649.0 97.0 223.0 158.0 5179.0 5228.0 0 0 g 0 6955.0 6117.0 9561.0 178.0 501.0 19257.0 19878.0 0.0 19195.0 5550.0 7998.0 0 0 t 0 3490.0 4258.0 1982.0 441.0 4.0 193.0 32.0 19905.0 114.0 4685.0 3211.0 0 0
MA1485.1_rc_shift0 (FERD3L_rc)				; oligos_6nt_mkv3_m25 versus MA1485.1_rc (FERD3L_rc); m=28/31; ncol2=14; w=11; offset=-2; strand=R; shift=0; score=0.569324; GTrACAGCTGkyrC ; cor=; Ncor= a 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 225.0 c 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 29605.0 g 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 68.0 t 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0 2158.0
MA0095.2_shift3 (YY1)				; oligos_6nt_mkv3_m25 versus MA0095.2 (YY1); m=29/31; ncol2=12; w=10; offset=1; strand=D; shift=3; score=0.546367; ---cAArATGGCkg ; cor=; Ncor= a 0 0 0 1126.0 6975.0 6741.0 2506.0 7171.0 0.0 11.0 13.0 812.0 867.0 899.0 c 0 0 0 4583.0 0.0 99.0 1117.0 0.0 12.0 0.0 0.0 5637.0 1681.0 875.0 g 0 0 0 801.0 181.0 268.0 3282.0 0.0 0.0 7160.0 7158.0 38.0 2765.0 4655.0 t 0 0 0 661.0 15.0 63.0 266.0 0.0 7159.0 0.0 0.0 684.0 1858.0 742.0
MA0092.1_rc_shift0 (Hand1::Tcf3_rc)				; oligos_6nt_mkv3_m25 versus MA0092.1_rc (Hand1::Tcf3_rc); m=30/31; ncol2=10; w=8; offset=-2; strand=R; shift=0; score=0.448466; awkCCAGAys---- ; cor=; Ncor= a 16.0 10.0 5.0 1.0 0.0 29.0 1.0 24.0 4.0 7.0 0 0 0 0 c 4.0 3.0 1.0 25.0 29.0 0.0 0.0 1.0 15.0 10.0 0 0 0 0 g 4.0 0.0 14.0 3.0 0.0 0.0 28.0 2.0 0.0 8.0 0 0 0 0 t 5.0 16.0 9.0 0.0 0.0 0.0 0.0 2.0 10.0 4.0 0 0 0 0
MA0748.2_shift5 (YY2)				; oligos_6nt_mkv3_m25 versus MA0748.2 (YY2); m=31/31; ncol2=11; w=8; offset=3; strand=D; shift=5; score=0.429285; -----msATGGCGG ; cor=; Ncor= a 0 0 0 0 0 1973.0 1280.0 5263.0 58.0 48.0 126.0 109.0 64.0 411.0 c 0 0 0 0 0 1591.0 1607.0 46.0 273.0 120.0 101.0 5384.0 330.0 516.0 g 0 0 0 0 0 1068.0 2143.0 359.0 125.0 5509.0 5376.0 25.0 5231.0 4474.0 t 0 0 0 0 0 1072.0 674.0 36.0 5248.0 27.0 101.0 186.0 79.0 303.0