One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m42/peak-motifs_oligos_6nt_mkv3_m42.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m42/peak-motifs_oligos_6nt_mkv3_m42_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m42_shift9 ; 14 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m42_shift9 (oligos_6nt_mkv3_m42oligos_6nt_mkv3_m42)
; oligos_6nt_mkv3_m42 (oligos_6nt_mkv3_m42oligos_6nt_mkv3_m42); m=0 (reference); ncol1=10; shift=9; ncol=21; ---------rsATGCCAss-- ; Alignment reference a 0 0 0 0 0 0 0 0 0 144 115 471 0 0 0 0 471 86 94 0 0 c 0 0 0 0 0 0 0 0 0 116 180 0 1 0 471 470 0 120 160 0 0 g 0 0 0 0 0 0 0 0 0 120 134 0 0 471 0 1 0 185 142 0 0 t 0 0 0 0 0 0 0 0 0 91 42 0 470 0 0 0 0 80 75 0 0

MA0671.1_shift10 (NFIX)
; oligos_6nt_mkv3_m42 versus MA0671.1 (NFIX); m=1/13; ncol2=9; w=9; offset=1; strand=D; shift=10; score=0.744451; ----------sgtGCCArv-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 7951.0 7832.0 11279.0 132.0 3.0 0.0 32864.0 32864.0 8251.0 0 0 c 0 0 0 0 0 0 0 0 0 0 8810.0 6134.0 9695.0 186.0 32864.0 32864.0 2230.0 1356.0 9039.0 0 0 g 0 0 0 0 0 0 0 0 0 0 8725.0 10855.0 5911.0 32864.0 3257.0 0.0 180.0 12688.0 9135.0 0 0 t 0 0 0 0 0 0 0 0 0 0 7378.0 8043.0 32864.0 2539.0 29.0 0.0 110.0 2399.0 6439.0 0 0

MA0670.1_shift10 (NFIA)
; oligos_6nt_mkv3_m42 versus MA0670.1 (NFIA); m=2/13; ncol2=10; w=9; offset=1; strand=D; shift=10; score=0.656254; ----------ggTGCCAArw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 22969.0 20706.0 0.0 0.0 0.0 0.0 89071.0 89418.0 23752.0 27709.0 0 c 0 0 0 0 0 0 0 0 0 0 22347.0 14274.0 0.0 0.0 93597.0 93394.0 0.0 0.0 21852.0 14439.0 0 g 0 0 0 0 0 0 0 0 0 0 24321.0 35089.0 0.0 98253.0 0.0 0.0 0.0 0.0 29423.0 16505.0 0 t 0 0 0 0 0 0 0 0 0 0 22282.0 23019.0 95496.0 0.0 0.0 0.0 0.0 0.0 17410.0 32052.0 0

MA0739.1_shift11 (Hic1)
; oligos_6nt_mkv3_m42 versus MA0739.1 (Hic1); m=3/13; ncol2=9; w=8; offset=2; strand=D; shift=11; score=0.652695; -----------rTGCCAaCc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 6337.0 62.0 950.0 50.0 88.0 9008.0 6140.0 1220.0 1610.0 0 c 0 0 0 0 0 0 0 0 0 0 0 719.0 422.0 588.0 11007.0 11007.0 1999.0 1986.0 11007.0 4822.0 0 g 0 0 0 0 0 0 0 0 0 0 0 4670.0 73.0 11007.0 121.0 31.0 3.0 2267.0 1629.0 1884.0 0 t 0 0 0 0 0 0 0 0 0 0 0 666.0 11007.0 183.0 0.0 68.0 317.0 614.0 1488.0 2692.0 0

MA0809.2_shift7 (TEAD4)
; oligos_6nt_mkv3_m42 versus MA0809.2 (TEAD4); m=4/13; ncol2=12; w=10; offset=-2; strand=D; shift=7; score=0.604054; -------ycACATTCCAgs-- ; cor=; Ncor= a 0 0 0 0 0 0 0 18932.0 17306.0 61263.0 7543.0 74797.0 965.0 2673.0 1366.0 1314.0 61802.0 16617.0 19272.0 0 0 c 0 0 0 0 0 0 0 22343.0 26577.0 2414.0 66205.0 1218.0 1129.0 1176.0 72555.0 75066.0 3874.0 13864.0 20301.0 0 0 g 0 0 0 0 0 0 0 15111.0 15427.0 11265.0 3295.0 569.0 1025.0 2100.0 1580.0 212.0 1191.0 32220.0 22630.0 0 0 t 0 0 0 0 0 0 0 21700.0 18776.0 3144.0 1043.0 1502.0 74967.0 72137.0 2585.0 1494.0 11219.0 15385.0 15883.0 0 0

MA0738.1_shift11 (HIC2)
; oligos_6nt_mkv3_m42 versus MA0738.1 (HIC2); m=5/13; ncol2=9; w=8; offset=2; strand=D; shift=11; score=0.579852; -----------rTGCCMrsy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 2606.0 0.0 494.0 23.0 435.0 1466.0 2493.0 770.0 760.0 0 c 0 0 0 0 0 0 0 0 0 0 0 394.0 117.0 354.0 4891.0 4891.0 3425.0 710.0 2200.0 1732.0 0 g 0 0 0 0 0 0 0 0 0 0 0 2285.0 0.0 4891.0 14.0 0.0 0.0 1290.0 1237.0 1001.0 0 t 0 0 0 0 0 0 0 0 0 0 0 367.0 4891.0 151.0 0.0 59.0 0.0 399.0 684.0 1398.0 0

MA0808.1_shift9 (TEAD3)
; oligos_6nt_mkv3_m42 versus MA0808.1 (TEAD3); m=6/13; ncol2=8; w=8; offset=0; strand=D; shift=9; score=0.579455; ---------rCATTCCw---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 12530.0 2524.0 21444.0 0.0 4566.0 0.0 0.0 21444.0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 66.0 18920.0 0.0 0.0 23.0 21444.0 21444.0 1039.0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 8913.0 441.0 0.0 0.0 969.0 0.0 0.0 8654.0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 1109.0 0.0 0.0 21444.0 16878.0 0.0 4.0 13663.0 0 0 0 0

MA0161.2_rc_shift10 (NFIC_rc)
; oligos_6nt_mkv3_m42 versus MA0161.2_rc (NFIC_rc); m=7/13; ncol2=11; w=9; offset=1; strand=R; shift=10; score=0.568448; ----------tsTGCCAAGwa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2791.0 2844.0 574.0 530.0 290.0 81.0 10745.0 10781.0 324.0 3488.0 3867.0 c 0 0 0 0 0 0 0 0 0 0 2760.0 3186.0 478.0 88.0 10973.0 11087.0 177.0 369.0 329.0 2086.0 2478.0 g 0 0 0 0 0 0 0 0 0 0 2712.0 2951.0 397.0 10725.0 121.0 129.0 333.0 303.0 10542.0 2137.0 2647.0 t 0 0 0 0 0 0 0 0 0 0 3344.0 2626.0 10158.0 264.0 223.0 310.0 352.0 154.0 412.0 3896.0 2615.0

MA0090.3_shift7 (TEAD1)
; oligos_6nt_mkv3_m42 versus MA0090.3 (TEAD1); m=8/13; ncol2=13; w=10; offset=-2; strand=D; shift=7; score=0.55423; -------hyACATTCCAGsm- ; cor=; Ncor= a 0 0 0 0 0 0 0 17689.0 16651.0 58030.0 6096.0 68106.0 535.0 4976.0 1348.0 702.0 57190.0 9124.0 13252.0 19194.0 0 c 0 0 0 0 0 0 0 19272.0 22059.0 1248.0 61276.0 646.0 700.0 622.0 66953.0 67635.0 1729.0 6215.0 20002.0 21358.0 0 g 0 0 0 0 0 0 0 14429.0 12053.0 9179.0 1923.0 946.0 646.0 1210.0 765.0 374.0 2051.0 47856.0 26525.0 16344.0 0 t 0 0 0 0 0 0 0 19008.0 19635.0 1941.0 1103.0 700.0 68517.0 63590.0 1332.0 1687.0 9428.0 7203.0 10619.0 13502.0 0

MA1527.1_shift2 (NFIC(var.2))
; oligos_6nt_mkv3_m42 versus MA1527.1 (NFIC(var.2)); m=9/13; ncol2=17; w=10; offset=-7; strand=D; shift=2; score=0.511161; --sTTGGCrysgTGCCArs-- ; cor=; Ncor= a 0 0 398.0 167.0 0.0 0.0 0.0 100.0 696.0 389.0 443.0 476.0 203.0 0.0 0.0 3.0 2118.0 1086.0 364.0 0 0 c 0 0 560.0 616.0 0.0 0.0 3.0 2118.0 268.0 705.0 580.0 382.0 340.0 0.0 2118.0 2118.0 0.0 19.0 695.0 0 0 g 0 0 761.0 65.0 5.0 2118.0 2118.0 0.0 694.0 492.0 678.0 881.0 97.0 2118.0 13.0 0.0 0.0 1032.0 647.0 0 0 t 0 0 399.0 2118.0 2118.0 0.0 0.0 0.0 461.0 531.0 417.0 379.0 2118.0 0.0 0.0 0.0 0.0 154.0 412.0 0 0

MA1528.1_shift2 (NFIX(var.2))
; oligos_6nt_mkv3_m42 versus MA1528.1 (NFIX(var.2)); m=10/13; ncol2=17; w=10; offset=-7; strand=D; shift=2; score=0.510138; --gtTGGCrysgTGCCArs-- ; cor=; Ncor= a 0 0 3182.0 4530.0 127.0 0.0 0.0 1819.0 7104.0 3125.0 3061.0 3423.0 1773.0 0.0 0.0 0.0 17346.0 8330.0 2858.0 0 0 c 0 0 4287.0 3912.0 231.0 0.0 0.0 17346.0 1890.0 5920.0 4769.0 2529.0 2300.0 0.0 17346.0 17346.0 1856.0 2165.0 5304.0 0 0 g 0 0 6640.0 3397.0 2386.0 17346.0 17346.0 0.0 5090.0 3846.0 5991.0 7942.0 1423.0 17346.0 0.0 0.0 63.0 9016.0 5740.0 0 0 t 0 0 3238.0 17346.0 17346.0 0.0 0.0 175.0 3262.0 4455.0 3525.0 3453.0 17346.0 459.0 0.0 0.0 314.0 3322.0 3443.0 0 0

MA0092.1_rc_shift11 (Hand1::Tcf3_rc)
; oligos_6nt_mkv3_m42 versus MA0092.1_rc (Hand1::Tcf3_rc); m=11/13; ncol2=10; w=8; offset=2; strand=R; shift=11; score=0.504441; -----------awkCCAGAys ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 16.0 10.0 5.0 1.0 0.0 29.0 1.0 24.0 4.0 7.0 c 0 0 0 0 0 0 0 0 0 0 0 4.0 3.0 1.0 25.0 29.0 0.0 0.0 1.0 15.0 10.0 g 0 0 0 0 0 0 0 0 0 0 0 4.0 0.0 14.0 3.0 0.0 0.0 28.0 2.0 0.0 8.0 t 0 0 0 0 0 0 0 0 0 0 0 5.0 16.0 9.0 0.0 0.0 0.0 0.0 2.0 10.0 4.0

MA0119.1_shift4 (NFIC::TLX1)
; oligos_6nt_mkv3_m42 versus MA0119.1 (NFIC::TLX1); m=12/13; ncol2=14; w=9; offset=-5; strand=D; shift=4; score=0.481377; ----TGGCAssrwGCCAA--- ; cor=; Ncor= a 0 0 0 0 0.0 0.0 0.0 0.0 14.0 2.0 2.0 7.0 4.0 0.0 0.0 0.0 16.0 14.0 0 0 0 c 0 0 0 0 0.0 0.0 0.0 16.0 1.0 8.0 8.0 1.0 3.0 0.0 16.0 16.0 0.0 0.0 0 0 0 g 0 0 0 0 0.0 16.0 16.0 0.0 0.0 5.0 4.0 5.0 2.0 16.0 0.0 0.0 0.0 1.0 0 0 0 t 0 0 0 0 16.0 0.0 0.0 0.0 1.0 1.0 2.0 3.0 7.0 0.0 0.0 0.0 0.0 1.0 0 0 0

MA1643.1_rc_shift0 (NFIB_rc)
; oligos_6nt_mkv3_m42 versus MA1643.1_rc (NFIB_rc); m=13/13; ncol2=21; w=10; offset=-9; strand=R; shift=0; score=0.416265; tdctTGGCAcmrTGCCAGgya ; cor=; Ncor= a 1050.0 1193.0 428.0 211.0 70.0 15.0 20.0 180.0 3083.0 468.0 1388.0 2175.0 544.0 18.0 16.0 11.0 4101.0 808.0 555.0 1098.0 1392.0 c 984.0 874.0 2969.0 1055.0 36.0 11.0 23.0 4191.0 451.0 2822.0 1149.0 608.0 175.0 27.0 4372.0 4389.0 162.0 193.0 526.0 1298.0 1023.0 g 1015.0 1193.0 467.0 161.0 373.0 4382.0 4357.0 31.0 181.0 532.0 792.0 1190.0 519.0 4223.0 12.0 11.0 20.0 3142.0 2911.0 839.0 946.0 t 1367.0 1156.0 552.0 2989.0 3937.0 8.0 16.0 14.0 701.0 594.0 1087.0 443.0 3178.0 148.0 16.0 5.0 133.0 273.0 424.0 1181.0 1055.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv3_m42_shift9 (oligos_6nt_mkv3_m42oligos_6nt_mkv3_m42)				; oligos_6nt_mkv3_m42 (oligos_6nt_mkv3_m42oligos_6nt_mkv3_m42); m=0 (reference); ncol1=10; shift=9; ncol=21; ---------rsATGCCAss-- ; Alignment reference a 0 0 0 0 0 0 0 0 0 144 115 471 0 0 0 0 471 86 94 0 0 c 0 0 0 0 0 0 0 0 0 116 180 0 1 0 471 470 0 120 160 0 0 g 0 0 0 0 0 0 0 0 0 120 134 0 0 471 0 1 0 185 142 0 0 t 0 0 0 0 0 0 0 0 0 91 42 0 470 0 0 0 0 80 75 0 0
MA0671.1_shift10 (NFIX)				; oligos_6nt_mkv3_m42 versus MA0671.1 (NFIX); m=1/13; ncol2=9; w=9; offset=1; strand=D; shift=10; score=0.744451; ----------sgtGCCArv-- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 7951.0 7832.0 11279.0 132.0 3.0 0.0 32864.0 32864.0 8251.0 0 0 c 0 0 0 0 0 0 0 0 0 0 8810.0 6134.0 9695.0 186.0 32864.0 32864.0 2230.0 1356.0 9039.0 0 0 g 0 0 0 0 0 0 0 0 0 0 8725.0 10855.0 5911.0 32864.0 3257.0 0.0 180.0 12688.0 9135.0 0 0 t 0 0 0 0 0 0 0 0 0 0 7378.0 8043.0 32864.0 2539.0 29.0 0.0 110.0 2399.0 6439.0 0 0
MA0670.1_shift10 (NFIA)				; oligos_6nt_mkv3_m42 versus MA0670.1 (NFIA); m=2/13; ncol2=10; w=9; offset=1; strand=D; shift=10; score=0.656254; ----------ggTGCCAArw- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 22969.0 20706.0 0.0 0.0 0.0 0.0 89071.0 89418.0 23752.0 27709.0 0 c 0 0 0 0 0 0 0 0 0 0 22347.0 14274.0 0.0 0.0 93597.0 93394.0 0.0 0.0 21852.0 14439.0 0 g 0 0 0 0 0 0 0 0 0 0 24321.0 35089.0 0.0 98253.0 0.0 0.0 0.0 0.0 29423.0 16505.0 0 t 0 0 0 0 0 0 0 0 0 0 22282.0 23019.0 95496.0 0.0 0.0 0.0 0.0 0.0 17410.0 32052.0 0
MA0739.1_shift11 (Hic1)				; oligos_6nt_mkv3_m42 versus MA0739.1 (Hic1); m=3/13; ncol2=9; w=8; offset=2; strand=D; shift=11; score=0.652695; -----------rTGCCAaCc- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 6337.0 62.0 950.0 50.0 88.0 9008.0 6140.0 1220.0 1610.0 0 c 0 0 0 0 0 0 0 0 0 0 0 719.0 422.0 588.0 11007.0 11007.0 1999.0 1986.0 11007.0 4822.0 0 g 0 0 0 0 0 0 0 0 0 0 0 4670.0 73.0 11007.0 121.0 31.0 3.0 2267.0 1629.0 1884.0 0 t 0 0 0 0 0 0 0 0 0 0 0 666.0 11007.0 183.0 0.0 68.0 317.0 614.0 1488.0 2692.0 0
MA0809.2_shift7 (TEAD4)				; oligos_6nt_mkv3_m42 versus MA0809.2 (TEAD4); m=4/13; ncol2=12; w=10; offset=-2; strand=D; shift=7; score=0.604054; -------ycACATTCCAgs-- ; cor=; Ncor= a 0 0 0 0 0 0 0 18932.0 17306.0 61263.0 7543.0 74797.0 965.0 2673.0 1366.0 1314.0 61802.0 16617.0 19272.0 0 0 c 0 0 0 0 0 0 0 22343.0 26577.0 2414.0 66205.0 1218.0 1129.0 1176.0 72555.0 75066.0 3874.0 13864.0 20301.0 0 0 g 0 0 0 0 0 0 0 15111.0 15427.0 11265.0 3295.0 569.0 1025.0 2100.0 1580.0 212.0 1191.0 32220.0 22630.0 0 0 t 0 0 0 0 0 0 0 21700.0 18776.0 3144.0 1043.0 1502.0 74967.0 72137.0 2585.0 1494.0 11219.0 15385.0 15883.0 0 0
MA0738.1_shift11 (HIC2)				; oligos_6nt_mkv3_m42 versus MA0738.1 (HIC2); m=5/13; ncol2=9; w=8; offset=2; strand=D; shift=11; score=0.579852; -----------rTGCCMrsy- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 2606.0 0.0 494.0 23.0 435.0 1466.0 2493.0 770.0 760.0 0 c 0 0 0 0 0 0 0 0 0 0 0 394.0 117.0 354.0 4891.0 4891.0 3425.0 710.0 2200.0 1732.0 0 g 0 0 0 0 0 0 0 0 0 0 0 2285.0 0.0 4891.0 14.0 0.0 0.0 1290.0 1237.0 1001.0 0 t 0 0 0 0 0 0 0 0 0 0 0 367.0 4891.0 151.0 0.0 59.0 0.0 399.0 684.0 1398.0 0
MA0808.1_shift9 (TEAD3)				; oligos_6nt_mkv3_m42 versus MA0808.1 (TEAD3); m=6/13; ncol2=8; w=8; offset=0; strand=D; shift=9; score=0.579455; ---------rCATTCCw---- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 12530.0 2524.0 21444.0 0.0 4566.0 0.0 0.0 21444.0 0 0 0 0 c 0 0 0 0 0 0 0 0 0 66.0 18920.0 0.0 0.0 23.0 21444.0 21444.0 1039.0 0 0 0 0 g 0 0 0 0 0 0 0 0 0 8913.0 441.0 0.0 0.0 969.0 0.0 0.0 8654.0 0 0 0 0 t 0 0 0 0 0 0 0 0 0 1109.0 0.0 0.0 21444.0 16878.0 0.0 4.0 13663.0 0 0 0 0
MA0161.2_rc_shift10 (NFIC_rc)				; oligos_6nt_mkv3_m42 versus MA0161.2_rc (NFIC_rc); m=7/13; ncol2=11; w=9; offset=1; strand=R; shift=10; score=0.568448; ----------tsTGCCAAGwa ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 2791.0 2844.0 574.0 530.0 290.0 81.0 10745.0 10781.0 324.0 3488.0 3867.0 c 0 0 0 0 0 0 0 0 0 0 2760.0 3186.0 478.0 88.0 10973.0 11087.0 177.0 369.0 329.0 2086.0 2478.0 g 0 0 0 0 0 0 0 0 0 0 2712.0 2951.0 397.0 10725.0 121.0 129.0 333.0 303.0 10542.0 2137.0 2647.0 t 0 0 0 0 0 0 0 0 0 0 3344.0 2626.0 10158.0 264.0 223.0 310.0 352.0 154.0 412.0 3896.0 2615.0
MA0090.3_shift7 (TEAD1)				; oligos_6nt_mkv3_m42 versus MA0090.3 (TEAD1); m=8/13; ncol2=13; w=10; offset=-2; strand=D; shift=7; score=0.55423; -------hyACATTCCAGsm- ; cor=; Ncor= a 0 0 0 0 0 0 0 17689.0 16651.0 58030.0 6096.0 68106.0 535.0 4976.0 1348.0 702.0 57190.0 9124.0 13252.0 19194.0 0 c 0 0 0 0 0 0 0 19272.0 22059.0 1248.0 61276.0 646.0 700.0 622.0 66953.0 67635.0 1729.0 6215.0 20002.0 21358.0 0 g 0 0 0 0 0 0 0 14429.0 12053.0 9179.0 1923.0 946.0 646.0 1210.0 765.0 374.0 2051.0 47856.0 26525.0 16344.0 0 t 0 0 0 0 0 0 0 19008.0 19635.0 1941.0 1103.0 700.0 68517.0 63590.0 1332.0 1687.0 9428.0 7203.0 10619.0 13502.0 0
MA1527.1_shift2 (NFIC(var.2))				; oligos_6nt_mkv3_m42 versus MA1527.1 (NFIC(var.2)); m=9/13; ncol2=17; w=10; offset=-7; strand=D; shift=2; score=0.511161; --sTTGGCrysgTGCCArs-- ; cor=; Ncor= a 0 0 398.0 167.0 0.0 0.0 0.0 100.0 696.0 389.0 443.0 476.0 203.0 0.0 0.0 3.0 2118.0 1086.0 364.0 0 0 c 0 0 560.0 616.0 0.0 0.0 3.0 2118.0 268.0 705.0 580.0 382.0 340.0 0.0 2118.0 2118.0 0.0 19.0 695.0 0 0 g 0 0 761.0 65.0 5.0 2118.0 2118.0 0.0 694.0 492.0 678.0 881.0 97.0 2118.0 13.0 0.0 0.0 1032.0 647.0 0 0 t 0 0 399.0 2118.0 2118.0 0.0 0.0 0.0 461.0 531.0 417.0 379.0 2118.0 0.0 0.0 0.0 0.0 154.0 412.0 0 0
MA1528.1_shift2 (NFIX(var.2))				; oligos_6nt_mkv3_m42 versus MA1528.1 (NFIX(var.2)); m=10/13; ncol2=17; w=10; offset=-7; strand=D; shift=2; score=0.510138; --gtTGGCrysgTGCCArs-- ; cor=; Ncor= a 0 0 3182.0 4530.0 127.0 0.0 0.0 1819.0 7104.0 3125.0 3061.0 3423.0 1773.0 0.0 0.0 0.0 17346.0 8330.0 2858.0 0 0 c 0 0 4287.0 3912.0 231.0 0.0 0.0 17346.0 1890.0 5920.0 4769.0 2529.0 2300.0 0.0 17346.0 17346.0 1856.0 2165.0 5304.0 0 0 g 0 0 6640.0 3397.0 2386.0 17346.0 17346.0 0.0 5090.0 3846.0 5991.0 7942.0 1423.0 17346.0 0.0 0.0 63.0 9016.0 5740.0 0 0 t 0 0 3238.0 17346.0 17346.0 0.0 0.0 175.0 3262.0 4455.0 3525.0 3453.0 17346.0 459.0 0.0 0.0 314.0 3322.0 3443.0 0 0
MA0092.1_rc_shift11 (Hand1::Tcf3_rc)				; oligos_6nt_mkv3_m42 versus MA0092.1_rc (Hand1::Tcf3_rc); m=11/13; ncol2=10; w=8; offset=2; strand=R; shift=11; score=0.504441; -----------awkCCAGAys ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0 16.0 10.0 5.0 1.0 0.0 29.0 1.0 24.0 4.0 7.0 c 0 0 0 0 0 0 0 0 0 0 0 4.0 3.0 1.0 25.0 29.0 0.0 0.0 1.0 15.0 10.0 g 0 0 0 0 0 0 0 0 0 0 0 4.0 0.0 14.0 3.0 0.0 0.0 28.0 2.0 0.0 8.0 t 0 0 0 0 0 0 0 0 0 0 0 5.0 16.0 9.0 0.0 0.0 0.0 0.0 2.0 10.0 4.0
MA0119.1_shift4 (NFIC::TLX1)				; oligos_6nt_mkv3_m42 versus MA0119.1 (NFIC::TLX1); m=12/13; ncol2=14; w=9; offset=-5; strand=D; shift=4; score=0.481377; ----TGGCAssrwGCCAA--- ; cor=; Ncor= a 0 0 0 0 0.0 0.0 0.0 0.0 14.0 2.0 2.0 7.0 4.0 0.0 0.0 0.0 16.0 14.0 0 0 0 c 0 0 0 0 0.0 0.0 0.0 16.0 1.0 8.0 8.0 1.0 3.0 0.0 16.0 16.0 0.0 0.0 0 0 0 g 0 0 0 0 0.0 16.0 16.0 0.0 0.0 5.0 4.0 5.0 2.0 16.0 0.0 0.0 0.0 1.0 0 0 0 t 0 0 0 0 16.0 0.0 0.0 0.0 1.0 1.0 2.0 3.0 7.0 0.0 0.0 0.0 0.0 1.0 0 0 0
MA1643.1_rc_shift0 (NFIB_rc)				; oligos_6nt_mkv3_m42 versus MA1643.1_rc (NFIB_rc); m=13/13; ncol2=21; w=10; offset=-9; strand=R; shift=0; score=0.416265; tdctTGGCAcmrTGCCAGgya ; cor=; Ncor= a 1050.0 1193.0 428.0 211.0 70.0 15.0 20.0 180.0 3083.0 468.0 1388.0 2175.0 544.0 18.0 16.0 11.0 4101.0 808.0 555.0 1098.0 1392.0 c 984.0 874.0 2969.0 1055.0 36.0 11.0 23.0 4191.0 451.0 2822.0 1149.0 608.0 175.0 27.0 4372.0 4389.0 162.0 193.0 526.0 1298.0 1023.0 g 1015.0 1193.0 467.0 161.0 373.0 4382.0 4357.0 31.0 181.0 532.0 792.0 1190.0 519.0 4223.0 12.0 11.0 20.0 3142.0 2911.0 839.0 946.0 t 1367.0 1156.0 552.0 2989.0 3937.0 8.0 16.0 14.0 701.0 594.0 1087.0 443.0 3178.0 148.0 16.0 5.0 133.0 273.0 424.0 1181.0 1055.0