One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m45/peak-motifs_oligos_6nt_mkv3_m45.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m45/peak-motifs_oligos_6nt_mkv3_m45_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m45_shift4 ; 20 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m45_shift4 (oligos_6nt_mkv3_m45oligos_6nt_mkv3_m45)
; oligos_6nt_mkv3_m45 (oligos_6nt_mkv3_m45oligos_6nt_mkv3_m45); m=0 (reference); ncol1=10; shift=4; ncol=17; ----krGGATTAvr--- ; Alignment reference a 0 0 0 0 37 39 0 4 150 2 1 152 40 44 0 0 0 c 0 0 0 0 34 18 7 1 0 1 0 2 40 34 0 0 0 g 0 0 0 0 39 67 146 142 1 0 1 0 51 47 0 0 0 t 0 0 0 0 44 30 1 7 3 151 152 0 23 29 0 0 0

MA0648.1_rc_shift4 (GSC_rc)
; oligos_6nt_mkv3_m45 versus MA0648.1_rc (GSC_rc); m=1/19; ncol2=10; w=10; offset=0; strand=R; shift=4; score=0.967516; ----rsGGATTArs--- ; cor=; Ncor= a 0 0 0 0 2168.0 1115.0 1099.0 787.0 6081.0 0.0 89.0 6081.0 1688.0 882.0 0 0 0 c 0 0 0 0 619.0 1732.0 828.0 452.0 144.0 0.0 176.0 0.0 553.0 2039.0 0 0 0 g 0 0 0 0 2197.0 2398.0 6081.0 6081.0 25.0 0.0 71.0 54.0 2885.0 1912.0 0 0 0 t 0 0 0 0 1097.0 836.0 315.0 416.0 0.0 6081.0 6081.0 0.0 955.0 1249.0 0 0 0

MA0891.1_rc_shift4 (GSC2_rc)
; oligos_6nt_mkv3_m45 versus MA0891.1_rc (GSC2_rc); m=2/19; ncol2=10; w=10; offset=0; strand=R; shift=4; score=0.962215; ----dsgGATTArg--- ; cor=; Ncor= a 0 0 0 0 525.0 444.0 439.0 204.0 2016.0 132.0 201.0 2016.0 630.0 427.0 0 0 0 c 0 0 0 0 168.0 698.0 422.0 179.0 145.0 0.0 56.0 0.0 190.0 442.0 0 0 0 g 0 0 0 0 814.0 668.0 2016.0 2016.0 41.0 11.0 87.0 0.0 839.0 686.0 0 0 0 t 0 0 0 0 509.0 205.0 182.0 255.0 0.0 2016.0 2016.0 116.0 356.0 461.0 0 0 0

MA0714.1_rc_shift5 (PITX3_rc)
; oligos_6nt_mkv3_m45 versus MA0714.1_rc (PITX3_rc); m=3/19; ncol2=9; w=9; offset=1; strand=R; shift=5; score=0.883454; -----gGGATTArb--- ; cor=; Ncor= a 0 0 0 0 0 1195.0 968.0 236.0 6253.0 0.0 158.0 6253.0 3354.0 1069.0 0 0 0 c 0 0 0 0 0 970.0 239.0 166.0 1101.0 15.0 260.0 9.0 806.0 1634.0 0 0 0 g 0 0 0 0 0 2950.0 6253.0 6253.0 138.0 0.0 32.0 51.0 2899.0 1924.0 0 0 0 t 0 0 0 0 0 1138.0 227.0 318.0 262.0 6253.0 6253.0 493.0 1602.0 1626.0 0 0 0

MA0712.2_shift3 (OTX2)
; oligos_6nt_mkv3_m45 versus MA0712.2 (OTX2); m=4/19; ncol2=12; w=10; offset=-1; strand=D; shift=3; score=0.825178; ---wdrGGATTAraw-- ; cor=; Ncor= a 0 0 0 42531.0 39166.0 37155.0 5435.0 2918.0 116411.0 765.0 1913.0 114798.0 30848.0 39802.0 36006.0 0 0 c 0 0 0 24445.0 17328.0 5322.0 827.0 1620.0 2220.0 598.0 1771.0 636.0 12347.0 25479.0 20623.0 0 0 g 0 0 0 22124.0 31825.0 55814.0 111741.0 113842.0 706.0 787.0 1407.0 1302.0 52479.0 27153.0 29814.0 0 0 t 0 0 0 31579.0 32360.0 22388.0 2676.0 2299.0 1342.0 118529.0 115588.0 3943.0 25005.0 28245.0 34236.0 0 0

MA0682.2_rc_shift5 (PITX1_rc)
; oligos_6nt_mkv3_m45 versus MA0682.2_rc (PITX1_rc); m=5/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.795587; -----gGGATTAr---- ; cor=; Ncor= a 0 0 0 0 0 2113.0 547.0 141.0 10531.0 0.0 0.0 10531.0 4432.0 0 0 0 0 c 0 0 0 0 0 1876.0 134.0 0.0 1039.0 0.0 0.0 0.0 2382.0 0 0 0 0 g 0 0 0 0 0 4194.0 10531.0 10531.0 0.0 0.0 0.0 0.0 6099.0 0 0 0 0 t 0 0 0 0 0 2348.0 68.0 143.0 0.0 10531.0 10531.0 0.0 2898.0 0 0 0 0

MA1547.1_rc_shift5 (PITX2_rc)
; oligos_6nt_mkv3_m45 versus MA1547.1_rc (PITX2_rc); m=6/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.793292; -----gGGATTAd---- ; cor=; Ncor= a 0 0 0 0 0 1371.0 364.0 1455.0 10956.0 0.0 0.0 10956.0 5436.0 0 0 0 0 c 0 0 0 0 0 1692.0 248.0 0.0 147.0 0.0 17.0 0.0 4140.0 0 0 0 0 g 0 0 0 0 0 5773.0 10956.0 10956.0 0.0 0.0 0.0 0.0 5519.0 0 0 0 0 t 0 0 0 0 0 2119.0 197.0 0.0 0.0 10956.0 10956.0 259.0 6050.0 0 0 0 0

MA0711.1_rc_shift5 (OTX1_rc)
; oligos_6nt_mkv3_m45 versus MA0711.1_rc (OTX1_rc); m=7/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.765421; -----sgGATTAr---- ; cor=; Ncor= a 0 0 0 0 0 4787.0 3363.0 378.0 23441.0 0.0 544.0 23441.0 8636.0 0 0 0 0 c 0 0 0 0 0 10599.0 8662.0 659.0 3160.0 0.0 254.0 0.0 3186.0 0 0 0 0 g 0 0 0 0 0 6182.0 23441.0 23441.0 0.0 0.0 0.0 90.0 6501.0 0 0 0 0 t 0 0 0 0 0 1873.0 789.0 647.0 243.0 23441.0 23441.0 745.0 5118.0 0 0 0 0

MA0719.1_rc_shift5 (RHOXF1_rc)
; oligos_6nt_mkv3_m45 versus MA0719.1_rc (RHOXF1_rc); m=8/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.710668; -----kGGmTyAw---- ; cor=; Ncor= a 0 0 0 0 0 2123.0 2275.0 0.0 7376.0 0.0 1367.0 10916.0 3193.0 0 0 0 0 c 0 0 0 0 0 2117.0 0.0 0.0 3540.0 0.0 5373.0 478.0 1855.0 0 0 0 0 g 0 0 0 0 0 3453.0 10916.0 10916.0 0.0 0.0 0.0 0.0 2644.0 0 0 0 0 t 0 0 0 0 0 3223.0 0.0 0.0 0.0 10916.0 5543.0 2837.0 3224.0 0 0 0 0

MA1480.1_rc_shift5 (DPRX_rc)
; oligos_6nt_mkv3_m45 versus MA1480.1_rc (DPRX_rc); m=9/19; ncol2=10; w=9; offset=1; strand=R; shift=5; score=0.707712; -----srGATTAkCt-- ; cor=; Ncor= a 0 0 0 0 0 1802.0 3231.0 350.0 8562.0 0.0 1071.0 8562.0 370.0 437.0 945.0 0 0 c 0 0 0 0 0 2269.0 754.0 222.0 198.0 0.0 1121.0 0.0 110.0 8562.0 1509.0 0 0 g 0 0 0 0 0 2970.0 8562.0 8562.0 0.0 0.0 1730.0 0.0 2761.0 1011.0 1411.0 0 0 t 0 0 0 0 0 1521.0 303.0 1014.0 0.0 8562.0 8562.0 0.0 5801.0 936.0 4696.0 0 0

MA0467.1_shift2 (Crx)
; oligos_6nt_mkv3_m45 versus MA0467.1 (Crx); m=10/19; ncol2=11; w=9; offset=-2; strand=D; shift=2; score=0.688985; --aAGrGGATTAr---- ; cor=; Ncor= a 0 0 1207.0 1454.0 347.0 943.0 515.0 0.0 1632.0 0.0 0.0 1995.0 544.0 0 0 0 0 c 0 0 297.0 43.0 55.0 222.0 0.0 0.0 465.0 0.0 29.0 0.0 52.0 0 0 0 0 g 0 0 458.0 417.0 1470.0 823.0 1574.0 2097.0 0.0 0.0 0.0 0.0 1326.0 0 0 0 0 t 0 0 135.0 183.0 225.0 109.0 8.0 0.0 0.0 2097.0 2068.0 102.0 175.0 0 0 0 0

MA0035.4_rc_shift4 (GATA1_rc)
; oligos_6nt_mkv3_m45 versus MA0035.4_rc (GATA1_rc); m=11/19; ncol2=11; w=10; offset=0; strand=R; shift=4; score=0.654707; ----wwAGATWAGaw-- ; cor=; Ncor= a 0 0 0 0 24586.0 19739.0 60641.0 1853.0 67766.0 1998.0 20570.0 69267.0 2744.0 28923.0 23455.0 0 0 c 0 0 0 0 9325.0 14358.0 765.0 1471.0 618.0 988.0 856.0 652.0 2712.0 11088.0 13955.0 0 0 g 0 0 0 0 15261.0 11186.0 3025.0 65937.0 1238.0 1292.0 710.0 595.0 62419.0 14489.0 12209.0 0 0 t 0 0 0 0 22656.0 26545.0 7397.0 2567.0 2206.0 67550.0 49692.0 1314.0 3953.0 17328.0 22209.0 0 0

MA0724.1_shift4 (VENTX)
; oligos_6nt_mkv3_m45 versus MA0724.1 (VENTX); m=12/19; ncol2=9; w=9; offset=0; strand=D; shift=4; score=0.644902; ----AmCrATTAr---- ; cor=; Ncor= a 0 0 0 0 17344.0 9981.0 562.0 7795.0 23923.0 0.0 0.0 23923.0 8820.0 0 0 0 0 c 0 0 0 0 983.0 13942.0 23923.0 5650.0 203.0 0.0 0.0 0.0 706.0 0 0 0 0 g 0 0 0 0 1934.0 6941.0 0.0 16128.0 0.0 0.0 0.0 0.0 15103.0 0 0 0 0 t 0 0 0 0 3662.0 5912.0 3964.0 626.0 74.0 23923.0 23923.0 0.0 2189.0 0 0 0 0

MA0875.1_shift5 (BARX1)
; oligos_6nt_mkv3_m45 versus MA0875.1 (BARX1); m=13/19; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.57511; -----vcmATTAr---- ; cor=; Ncor= a 0 0 0 0 0 1872.0 590.0 3339.0 6805.0 0.0 0.0 6805.0 1917.0 0 0 0 0 c 0 0 0 0 0 1821.0 5138.0 1992.0 207.0 0.0 0.0 0.0 1391.0 0 0 0 0 g 0 0 0 0 0 2236.0 246.0 1386.0 192.0 0.0 0.0 0.0 2420.0 0 0 0 0 t 0 0 0 0 0 877.0 1667.0 87.0 0.0 6805.0 6805.0 0.0 1077.0 0 0 0 0

MA0876.1_shift5 (BSX)
; oligos_6nt_mkv3_m45 versus MA0876.1 (BSX); m=14/19; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.568083; -----symATTAv---- ; cor=; Ncor= a 0 0 0 0 0 1449.0 688.0 4036.0 8832.0 0.0 96.0 8832.0 2770.0 0 0 0 0 c 0 0 0 0 0 3929.0 5585.0 2483.0 194.0 0.0 0.0 0.0 2369.0 0 0 0 0 g 0 0 0 0 0 2290.0 103.0 2197.0 1078.0 0.0 0.0 0.0 2417.0 0 0 0 0 t 0 0 0 0 0 1164.0 3247.0 116.0 66.0 8832.0 8832.0 0.0 1276.0 0 0 0 0

MA0883.1_shift0 (Dmbx1)
; oligos_6nt_mkv3_m45 versus MA0883.1 (Dmbx1); m=15/19; ncol2=17; w=10; offset=-4; strand=D; shift=0; score=0.557473; wdrwmmGGATTArkbww ; cor=; Ncor= a 34.0 28.0 49.0 49.0 25.0 28.0 6.0 0.0 94.0 0.0 1.0 97.0 40.0 9.0 15.0 30.0 37.0 c 13.0 8.0 8.0 8.0 36.0 50.0 1.0 1.0 6.0 0.0 1.0 0.0 5.0 11.0 28.0 20.0 12.0 g 12.0 37.0 31.0 13.0 18.0 20.0 93.0 99.0 0.0 0.0 0.0 0.0 35.0 37.0 30.0 19.0 15.0 t 41.0 27.0 12.0 30.0 21.0 3.0 0.0 0.0 0.0 99.0 98.0 3.0 20.0 42.0 27.0 30.0 36.0

MA0056.2_rc_shift0 (MZF1_rc)
; oligos_6nt_mkv3_m45 versus MA0056.2_rc (MZF1_rc); m=16/19; ncol2=13; w=9; offset=-4; strand=R; shift=0; score=0.502444; rdgTGGGGATTwk---- ; cor=; Ncor= a 2501.0 2586.0 2019.0 1111.0 369.0 154.0 114.0 93.0 7982.0 282.0 372.0 2278.0 2033.0 0 0 0 0 c 1773.0 1482.0 1523.0 484.0 83.0 58.0 54.0 100.0 98.0 385.0 999.0 1543.0 1808.0 0 0 0 0 g 2206.0 2078.0 3007.0 611.0 7673.0 7919.0 7939.0 7949.0 56.0 426.0 1016.0 1944.0 2260.0 0 0 0 0 t 1762.0 2096.0 1693.0 6036.0 117.0 111.0 135.0 100.0 106.0 7149.0 5855.0 2477.0 2141.0 0 0 0 0

MA0151.1_shift8 (Arid3a)
; oligos_6nt_mkv3_m45 versus MA0151.1 (Arid3a); m=17/19; ncol2=6; w=6; offset=4; strand=D; shift=8; score=0.481202; --------ATyAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.0 0.0 1.0 27.0 27.0 20.0 0 0 0 c 0 0 0 0 0 0 0 0 0.0 0.0 9.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 0 0 0 t 0 0 0 0 0 0 0 0 0.0 27.0 17.0 0.0 0.0 6.0 0 0 0

MA0884.1_rc_shift5 (DUXA_rc)
; oligos_6nt_mkv3_m45 versus MA0884.1_rc (DUXA_rc); m=18/19; ncol2=13; w=9; offset=1; strand=R; shift=5; score=0.479368; -----yTGATTarrTya ; cor=; Ncor= a 0 0 0 0 0 189.0 92.0 108.0 1014.0 7.0 22.0 1014.0 417.0 620.0 5.0 12.0 1014.0 c 0 0 0 0 0 283.0 52.0 3.0 5.0 10.0 47.0 116.0 193.0 125.0 11.0 359.0 111.0 g 0 0 0 0 0 178.0 29.0 1014.0 1.0 7.0 56.0 344.0 392.0 394.0 6.0 5.0 285.0 t 0 0 0 0 0 364.0 1014.0 0.0 0.0 1014.0 1014.0 23.0 12.0 136.0 1014.0 655.0 241.0

MA0468.1_rc_shift6 (DUX4_rc)
; oligos_6nt_mkv3_m45 versus MA0468.1_rc (DUX4_rc); m=19/19; ncol2=11; w=8; offset=2; strand=R; shift=6; score=0.438407; ------TGATTrrrTTA ; cor=; Ncor= a 0 0 0 0 0 0 4419.0 809.0 38217.0 0.0 50.0 18139.0 16758.0 19312.0 0.0 0.0 27446.0 c 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 6127.0 4981.0 2002.0 0.0 1216.0 979.0 g 0 0 0 0 0 0 0.0 37408.0 0.0 0.0 2889.0 13951.0 16478.0 11675.0 0.0 0.0 2495.0 t 0 0 0 0 0 0 33798.0 0.0 0.0 38217.0 35278.0 0.0 0.0 5228.0 38217.0 37001.0 7297.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv3_m45_shift4 (oligos_6nt_mkv3_m45oligos_6nt_mkv3_m45)				; oligos_6nt_mkv3_m45 (oligos_6nt_mkv3_m45oligos_6nt_mkv3_m45); m=0 (reference); ncol1=10; shift=4; ncol=17; ----krGGATTAvr--- ; Alignment reference a 0 0 0 0 37 39 0 4 150 2 1 152 40 44 0 0 0 c 0 0 0 0 34 18 7 1 0 1 0 2 40 34 0 0 0 g 0 0 0 0 39 67 146 142 1 0 1 0 51 47 0 0 0 t 0 0 0 0 44 30 1 7 3 151 152 0 23 29 0 0 0
MA0648.1_rc_shift4 (GSC_rc)				; oligos_6nt_mkv3_m45 versus MA0648.1_rc (GSC_rc); m=1/19; ncol2=10; w=10; offset=0; strand=R; shift=4; score=0.967516; ----rsGGATTArs--- ; cor=; Ncor= a 0 0 0 0 2168.0 1115.0 1099.0 787.0 6081.0 0.0 89.0 6081.0 1688.0 882.0 0 0 0 c 0 0 0 0 619.0 1732.0 828.0 452.0 144.0 0.0 176.0 0.0 553.0 2039.0 0 0 0 g 0 0 0 0 2197.0 2398.0 6081.0 6081.0 25.0 0.0 71.0 54.0 2885.0 1912.0 0 0 0 t 0 0 0 0 1097.0 836.0 315.0 416.0 0.0 6081.0 6081.0 0.0 955.0 1249.0 0 0 0
MA0891.1_rc_shift4 (GSC2_rc)				; oligos_6nt_mkv3_m45 versus MA0891.1_rc (GSC2_rc); m=2/19; ncol2=10; w=10; offset=0; strand=R; shift=4; score=0.962215; ----dsgGATTArg--- ; cor=; Ncor= a 0 0 0 0 525.0 444.0 439.0 204.0 2016.0 132.0 201.0 2016.0 630.0 427.0 0 0 0 c 0 0 0 0 168.0 698.0 422.0 179.0 145.0 0.0 56.0 0.0 190.0 442.0 0 0 0 g 0 0 0 0 814.0 668.0 2016.0 2016.0 41.0 11.0 87.0 0.0 839.0 686.0 0 0 0 t 0 0 0 0 509.0 205.0 182.0 255.0 0.0 2016.0 2016.0 116.0 356.0 461.0 0 0 0
MA0714.1_rc_shift5 (PITX3_rc)				; oligos_6nt_mkv3_m45 versus MA0714.1_rc (PITX3_rc); m=3/19; ncol2=9; w=9; offset=1; strand=R; shift=5; score=0.883454; -----gGGATTArb--- ; cor=; Ncor= a 0 0 0 0 0 1195.0 968.0 236.0 6253.0 0.0 158.0 6253.0 3354.0 1069.0 0 0 0 c 0 0 0 0 0 970.0 239.0 166.0 1101.0 15.0 260.0 9.0 806.0 1634.0 0 0 0 g 0 0 0 0 0 2950.0 6253.0 6253.0 138.0 0.0 32.0 51.0 2899.0 1924.0 0 0 0 t 0 0 0 0 0 1138.0 227.0 318.0 262.0 6253.0 6253.0 493.0 1602.0 1626.0 0 0 0
MA0712.2_shift3 (OTX2)				; oligos_6nt_mkv3_m45 versus MA0712.2 (OTX2); m=4/19; ncol2=12; w=10; offset=-1; strand=D; shift=3; score=0.825178; ---wdrGGATTAraw-- ; cor=; Ncor= a 0 0 0 42531.0 39166.0 37155.0 5435.0 2918.0 116411.0 765.0 1913.0 114798.0 30848.0 39802.0 36006.0 0 0 c 0 0 0 24445.0 17328.0 5322.0 827.0 1620.0 2220.0 598.0 1771.0 636.0 12347.0 25479.0 20623.0 0 0 g 0 0 0 22124.0 31825.0 55814.0 111741.0 113842.0 706.0 787.0 1407.0 1302.0 52479.0 27153.0 29814.0 0 0 t 0 0 0 31579.0 32360.0 22388.0 2676.0 2299.0 1342.0 118529.0 115588.0 3943.0 25005.0 28245.0 34236.0 0 0
MA0682.2_rc_shift5 (PITX1_rc)				; oligos_6nt_mkv3_m45 versus MA0682.2_rc (PITX1_rc); m=5/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.795587; -----gGGATTAr---- ; cor=; Ncor= a 0 0 0 0 0 2113.0 547.0 141.0 10531.0 0.0 0.0 10531.0 4432.0 0 0 0 0 c 0 0 0 0 0 1876.0 134.0 0.0 1039.0 0.0 0.0 0.0 2382.0 0 0 0 0 g 0 0 0 0 0 4194.0 10531.0 10531.0 0.0 0.0 0.0 0.0 6099.0 0 0 0 0 t 0 0 0 0 0 2348.0 68.0 143.0 0.0 10531.0 10531.0 0.0 2898.0 0 0 0 0
MA1547.1_rc_shift5 (PITX2_rc)				; oligos_6nt_mkv3_m45 versus MA1547.1_rc (PITX2_rc); m=6/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.793292; -----gGGATTAd---- ; cor=; Ncor= a 0 0 0 0 0 1371.0 364.0 1455.0 10956.0 0.0 0.0 10956.0 5436.0 0 0 0 0 c 0 0 0 0 0 1692.0 248.0 0.0 147.0 0.0 17.0 0.0 4140.0 0 0 0 0 g 0 0 0 0 0 5773.0 10956.0 10956.0 0.0 0.0 0.0 0.0 5519.0 0 0 0 0 t 0 0 0 0 0 2119.0 197.0 0.0 0.0 10956.0 10956.0 259.0 6050.0 0 0 0 0
MA0711.1_rc_shift5 (OTX1_rc)				; oligos_6nt_mkv3_m45 versus MA0711.1_rc (OTX1_rc); m=7/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.765421; -----sgGATTAr---- ; cor=; Ncor= a 0 0 0 0 0 4787.0 3363.0 378.0 23441.0 0.0 544.0 23441.0 8636.0 0 0 0 0 c 0 0 0 0 0 10599.0 8662.0 659.0 3160.0 0.0 254.0 0.0 3186.0 0 0 0 0 g 0 0 0 0 0 6182.0 23441.0 23441.0 0.0 0.0 0.0 90.0 6501.0 0 0 0 0 t 0 0 0 0 0 1873.0 789.0 647.0 243.0 23441.0 23441.0 745.0 5118.0 0 0 0 0
MA0719.1_rc_shift5 (RHOXF1_rc)				; oligos_6nt_mkv3_m45 versus MA0719.1_rc (RHOXF1_rc); m=8/19; ncol2=8; w=8; offset=1; strand=R; shift=5; score=0.710668; -----kGGmTyAw---- ; cor=; Ncor= a 0 0 0 0 0 2123.0 2275.0 0.0 7376.0 0.0 1367.0 10916.0 3193.0 0 0 0 0 c 0 0 0 0 0 2117.0 0.0 0.0 3540.0 0.0 5373.0 478.0 1855.0 0 0 0 0 g 0 0 0 0 0 3453.0 10916.0 10916.0 0.0 0.0 0.0 0.0 2644.0 0 0 0 0 t 0 0 0 0 0 3223.0 0.0 0.0 0.0 10916.0 5543.0 2837.0 3224.0 0 0 0 0
MA1480.1_rc_shift5 (DPRX_rc)				; oligos_6nt_mkv3_m45 versus MA1480.1_rc (DPRX_rc); m=9/19; ncol2=10; w=9; offset=1; strand=R; shift=5; score=0.707712; -----srGATTAkCt-- ; cor=; Ncor= a 0 0 0 0 0 1802.0 3231.0 350.0 8562.0 0.0 1071.0 8562.0 370.0 437.0 945.0 0 0 c 0 0 0 0 0 2269.0 754.0 222.0 198.0 0.0 1121.0 0.0 110.0 8562.0 1509.0 0 0 g 0 0 0 0 0 2970.0 8562.0 8562.0 0.0 0.0 1730.0 0.0 2761.0 1011.0 1411.0 0 0 t 0 0 0 0 0 1521.0 303.0 1014.0 0.0 8562.0 8562.0 0.0 5801.0 936.0 4696.0 0 0
MA0467.1_shift2 (Crx)				; oligos_6nt_mkv3_m45 versus MA0467.1 (Crx); m=10/19; ncol2=11; w=9; offset=-2; strand=D; shift=2; score=0.688985; --aAGrGGATTAr---- ; cor=; Ncor= a 0 0 1207.0 1454.0 347.0 943.0 515.0 0.0 1632.0 0.0 0.0 1995.0 544.0 0 0 0 0 c 0 0 297.0 43.0 55.0 222.0 0.0 0.0 465.0 0.0 29.0 0.0 52.0 0 0 0 0 g 0 0 458.0 417.0 1470.0 823.0 1574.0 2097.0 0.0 0.0 0.0 0.0 1326.0 0 0 0 0 t 0 0 135.0 183.0 225.0 109.0 8.0 0.0 0.0 2097.0 2068.0 102.0 175.0 0 0 0 0
MA0035.4_rc_shift4 (GATA1_rc)				; oligos_6nt_mkv3_m45 versus MA0035.4_rc (GATA1_rc); m=11/19; ncol2=11; w=10; offset=0; strand=R; shift=4; score=0.654707; ----wwAGATWAGaw-- ; cor=; Ncor= a 0 0 0 0 24586.0 19739.0 60641.0 1853.0 67766.0 1998.0 20570.0 69267.0 2744.0 28923.0 23455.0 0 0 c 0 0 0 0 9325.0 14358.0 765.0 1471.0 618.0 988.0 856.0 652.0 2712.0 11088.0 13955.0 0 0 g 0 0 0 0 15261.0 11186.0 3025.0 65937.0 1238.0 1292.0 710.0 595.0 62419.0 14489.0 12209.0 0 0 t 0 0 0 0 22656.0 26545.0 7397.0 2567.0 2206.0 67550.0 49692.0 1314.0 3953.0 17328.0 22209.0 0 0
MA0724.1_shift4 (VENTX)				; oligos_6nt_mkv3_m45 versus MA0724.1 (VENTX); m=12/19; ncol2=9; w=9; offset=0; strand=D; shift=4; score=0.644902; ----AmCrATTAr---- ; cor=; Ncor= a 0 0 0 0 17344.0 9981.0 562.0 7795.0 23923.0 0.0 0.0 23923.0 8820.0 0 0 0 0 c 0 0 0 0 983.0 13942.0 23923.0 5650.0 203.0 0.0 0.0 0.0 706.0 0 0 0 0 g 0 0 0 0 1934.0 6941.0 0.0 16128.0 0.0 0.0 0.0 0.0 15103.0 0 0 0 0 t 0 0 0 0 3662.0 5912.0 3964.0 626.0 74.0 23923.0 23923.0 0.0 2189.0 0 0 0 0
MA0875.1_shift5 (BARX1)				; oligos_6nt_mkv3_m45 versus MA0875.1 (BARX1); m=13/19; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.57511; -----vcmATTAr---- ; cor=; Ncor= a 0 0 0 0 0 1872.0 590.0 3339.0 6805.0 0.0 0.0 6805.0 1917.0 0 0 0 0 c 0 0 0 0 0 1821.0 5138.0 1992.0 207.0 0.0 0.0 0.0 1391.0 0 0 0 0 g 0 0 0 0 0 2236.0 246.0 1386.0 192.0 0.0 0.0 0.0 2420.0 0 0 0 0 t 0 0 0 0 0 877.0 1667.0 87.0 0.0 6805.0 6805.0 0.0 1077.0 0 0 0 0
MA0876.1_shift5 (BSX)				; oligos_6nt_mkv3_m45 versus MA0876.1 (BSX); m=14/19; ncol2=8; w=8; offset=1; strand=D; shift=5; score=0.568083; -----symATTAv---- ; cor=; Ncor= a 0 0 0 0 0 1449.0 688.0 4036.0 8832.0 0.0 96.0 8832.0 2770.0 0 0 0 0 c 0 0 0 0 0 3929.0 5585.0 2483.0 194.0 0.0 0.0 0.0 2369.0 0 0 0 0 g 0 0 0 0 0 2290.0 103.0 2197.0 1078.0 0.0 0.0 0.0 2417.0 0 0 0 0 t 0 0 0 0 0 1164.0 3247.0 116.0 66.0 8832.0 8832.0 0.0 1276.0 0 0 0 0
MA0883.1_shift0 (Dmbx1)				; oligos_6nt_mkv3_m45 versus MA0883.1 (Dmbx1); m=15/19; ncol2=17; w=10; offset=-4; strand=D; shift=0; score=0.557473; wdrwmmGGATTArkbww ; cor=; Ncor= a 34.0 28.0 49.0 49.0 25.0 28.0 6.0 0.0 94.0 0.0 1.0 97.0 40.0 9.0 15.0 30.0 37.0 c 13.0 8.0 8.0 8.0 36.0 50.0 1.0 1.0 6.0 0.0 1.0 0.0 5.0 11.0 28.0 20.0 12.0 g 12.0 37.0 31.0 13.0 18.0 20.0 93.0 99.0 0.0 0.0 0.0 0.0 35.0 37.0 30.0 19.0 15.0 t 41.0 27.0 12.0 30.0 21.0 3.0 0.0 0.0 0.0 99.0 98.0 3.0 20.0 42.0 27.0 30.0 36.0
MA0056.2_rc_shift0 (MZF1_rc)				; oligos_6nt_mkv3_m45 versus MA0056.2_rc (MZF1_rc); m=16/19; ncol2=13; w=9; offset=-4; strand=R; shift=0; score=0.502444; rdgTGGGGATTwk---- ; cor=; Ncor= a 2501.0 2586.0 2019.0 1111.0 369.0 154.0 114.0 93.0 7982.0 282.0 372.0 2278.0 2033.0 0 0 0 0 c 1773.0 1482.0 1523.0 484.0 83.0 58.0 54.0 100.0 98.0 385.0 999.0 1543.0 1808.0 0 0 0 0 g 2206.0 2078.0 3007.0 611.0 7673.0 7919.0 7939.0 7949.0 56.0 426.0 1016.0 1944.0 2260.0 0 0 0 0 t 1762.0 2096.0 1693.0 6036.0 117.0 111.0 135.0 100.0 106.0 7149.0 5855.0 2477.0 2141.0 0 0 0 0
MA0151.1_shift8 (Arid3a)				; oligos_6nt_mkv3_m45 versus MA0151.1 (Arid3a); m=17/19; ncol2=6; w=6; offset=4; strand=D; shift=8; score=0.481202; --------ATyAAA--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 27.0 0.0 1.0 27.0 27.0 20.0 0 0 0 c 0 0 0 0 0 0 0 0 0.0 0.0 9.0 0.0 0.0 0.0 0 0 0 g 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 1.0 0 0 0 t 0 0 0 0 0 0 0 0 0.0 27.0 17.0 0.0 0.0 6.0 0 0 0
MA0884.1_rc_shift5 (DUXA_rc)				; oligos_6nt_mkv3_m45 versus MA0884.1_rc (DUXA_rc); m=18/19; ncol2=13; w=9; offset=1; strand=R; shift=5; score=0.479368; -----yTGATTarrTya ; cor=; Ncor= a 0 0 0 0 0 189.0 92.0 108.0 1014.0 7.0 22.0 1014.0 417.0 620.0 5.0 12.0 1014.0 c 0 0 0 0 0 283.0 52.0 3.0 5.0 10.0 47.0 116.0 193.0 125.0 11.0 359.0 111.0 g 0 0 0 0 0 178.0 29.0 1014.0 1.0 7.0 56.0 344.0 392.0 394.0 6.0 5.0 285.0 t 0 0 0 0 0 364.0 1014.0 0.0 0.0 1014.0 1014.0 23.0 12.0 136.0 1014.0 655.0 241.0
MA0468.1_rc_shift6 (DUX4_rc)				; oligos_6nt_mkv3_m45 versus MA0468.1_rc (DUX4_rc); m=19/19; ncol2=11; w=8; offset=2; strand=R; shift=6; score=0.438407; ------TGATTrrrTTA ; cor=; Ncor= a 0 0 0 0 0 0 4419.0 809.0 38217.0 0.0 50.0 18139.0 16758.0 19312.0 0.0 0.0 27446.0 c 0 0 0 0 0 0 0.0 0.0 0.0 0.0 0.0 6127.0 4981.0 2002.0 0.0 1216.0 979.0 g 0 0 0 0 0 0 0.0 37408.0 0.0 0.0 2889.0 13951.0 16478.0 11675.0 0.0 0.0 2495.0 t 0 0 0 0 0 0 33798.0 0.0 0.0 38217.0 35278.0 0.0 0.0 5228.0 38217.0 37001.0 7297.0