One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m46/peak-motifs_oligos_6nt_mkv3_m46.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_6nt_mkv3_m46/peak-motifs_oligos_6nt_mkv3_m46_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m46_shift6 ; 15 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m46_shift6 (oligos_6nt_mkv3_m46oligos_6nt_mkv3_m46)
; oligos_6nt_mkv3_m46 (oligos_6nt_mkv3_m46oligos_6nt_mkv3_m46); m=0 (reference); ncol1=10; shift=6; ncol=16; ------ssTGACCAsm ; Alignment reference a 0 0 0 0 0 0 92 77 0 0 457 0 0 454 58 164 c 0 0 0 0 0 0 119 206 1 0 0 457 457 0 186 145 g 0 0 0 0 0 0 144 141 0 456 0 0 0 3 151 86 t 0 0 0 0 0 0 102 33 456 1 0 0 0 0 62 62

MA1535.1_rc_shift7 (NR2C1_rc)
; oligos_6nt_mkv3_m46 versus MA1535.1_rc (NR2C1_rc); m=1/14; ncol2=9; w=9; offset=1; strand=R; shift=7; score=0.716285; -------rTGACCyyk ; cor=; Ncor= a 0 0 0 0 0 0 0 2499.0 0.0 0.0 9622.0 0.0 297.0 55.0 1316.0 2225.0 c 0 0 0 0 0 0 0 2039.0 1716.0 321.0 271.0 9622.0 9622.0 4756.0 5587.0 1997.0 g 0 0 0 0 0 0 0 2786.0 0.0 9622.0 0.0 0.0 0.0 227.0 1225.0 2848.0 t 0 0 0 0 0 0 0 2298.0 9622.0 0.0 0.0 0.0 0.0 4866.0 4035.0 2552.0

MA1536.1_rc_shift7 (NR2C2(var.2)_rc)
; oligos_6nt_mkv3_m46 versus MA1536.1_rc (NR2C2(var.2)_rc); m=2/14; ncol2=8; w=8; offset=1; strand=R; shift=7; score=0.604426; -------dYGACCyy- ; cor=; Ncor= a 0 0 0 0 0 0 0 5122.0 0.0 4406.0 18628.0 4790.0 1341.0 0.0 2861.0 0 c 0 0 0 0 0 0 0 3684.0 6639.0 1643.0 1588.0 18628.0 18628.0 8395.0 6420.0 0 g 0 0 0 0 0 0 0 4757.0 0.0 18628.0 0.0 0.0 236.0 719.0 3111.0 0 t 0 0 0 0 0 0 0 5065.0 18628.0 0.0 0.0 0.0 0.0 10232.0 6236.0 0

MA0017.2_rc_shift4 (NR2F1_rc)
; oligos_6nt_mkv3_m46 versus MA0017.2_rc (NR2F1_rc); m=3/14; ncol2=13; w=10; offset=-2; strand=R; shift=4; score=0.570209; ----CyykTGACCYyt ; cor=; Ncor= a 0 0 0 0 3466.0 2427.0 1469.0 2270.0 0.0 0.0 12059.0 0.0 0.0 0.0 469.0 1948.0 c 0 0 0 0 36863.0 3886.0 4395.0 1618.0 91.0 0.0 0.0 12059.0 12059.0 3791.0 4869.0 1153.0 g 0 0 0 0 2912.0 2470.0 2966.0 3055.0 0.0 12059.0 0.0 0.0 30.0 0.0 387.0 1692.0 t 0 0 0 0 5681.0 3276.0 3229.0 5116.0 12059.0 0.0 0.0 0.0 0.0 8496.0 6333.0 7266.0

MA1150.1_rc_shift7 (RORB_rc)
; oligos_6nt_mkv3_m46 versus MA1150.1_rc (RORB_rc); m=4/14; ncol2=11; w=9; offset=1; strand=R; shift=7; score=0.566021; -------rTGACCyaa ; cor=; Ncor= a 0 0 0 0 0 0 0 324.0 26.0 155.0 776.0 27.0 52.0 26.0 547.0 403.0 c 0 0 0 0 0 0 0 145.0 63.0 17.0 50.0 928.0 907.0 358.0 235.0 201.0 g 0 0 0 0 0 0 0 326.0 15.0 781.0 146.0 13.0 25.0 14.0 165.0 162.0 t 0 0 0 0 0 0 0 205.0 896.0 47.0 28.0 32.0 16.0 602.0 53.0 233.0

MA1110.1_shift4 (NR1H4)
; oligos_6nt_mkv3_m46 versus MA1110.1 (NR1H4); m=5/14; ncol2=11; w=9; offset=-2; strand=D; shift=4; score=0.542712; ----tcAATGACCyh- ; cor=; Ncor= a 0 0 0 0 76.0 68.0 461.0 413.0 3.0 24.0 455.0 26.0 12.0 72.0 135.0 0 c 0 0 0 0 83.0 240.0 10.0 28.0 15.0 7.0 22.0 468.0 476.0 135.0 131.0 0 g 0 0 0 0 117.0 87.0 12.0 36.0 6.0 462.0 14.0 0.0 6.0 81.0 105.0 0 t 0 0 0 0 229.0 110.0 22.0 28.0 481.0 12.0 14.0 11.0 11.0 217.0 134.0 0

MA0014.3_shift3 (PAX5)
; oligos_6nt_mkv3_m46 versus MA0014.3 (PAX5); m=6/14; ncol2=12; w=9; offset=-3; strand=D; shift=3; score=0.53291; ---rrGCGTGACCmb- ; cor=; Ncor= a 0 0 0 540.0 625.0 18.0 18.0 111.0 94.0 16.0 1243.0 32.0 69.0 377.0 263.0 0 c 0 0 0 179.0 148.0 151.0 1276.0 35.0 88.0 37.0 39.0 1305.0 1081.0 405.0 403.0 0 g 0 0 0 578.0 354.0 1231.0 34.0 1243.0 30.0 1355.0 70.0 57.0 118.0 312.0 359.0 0 t 0 0 0 115.0 285.0 12.0 84.0 23.0 1200.0 4.0 60.0 18.0 144.0 318.0 387.0 0

MA0071.1_rc_shift8 (RORA_rc)
; oligos_6nt_mkv3_m46 versus MA0071.1_rc (RORA_rc); m=7/14; ncol2=10; w=8; offset=2; strand=R; shift=8; score=0.50902; --------TGACCTwg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.0 0.0 25.0 0.0 0.0 0.0 7.0 3.0 c 0 0 0 0 0 0 0 0 0.0 0.0 0.0 25.0 25.0 4.0 5.0 4.0 g 0 0 0 0 0 0 0 0 0.0 25.0 0.0 0.0 0.0 0.0 2.0 12.0 t 0 0 0 0 0 0 0 0 25.0 0.0 0.0 0.0 0.0 21.0 11.0 6.0

MA0067.1_rc_shift5 (Pax2_rc)
; oligos_6nt_mkv3_m46 versus MA0067.1_rc (Pax2_rc); m=8/14; ncol2=8; w=7; offset=-1; strand=R; shift=5; score=0.472032; -----vmrTGAcw--- ; cor=; Ncor= a 0 0 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 0 c 0 0 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 0 g 0 0 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 0 t 0 0 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0 0

MA1556.1_rc_shift1 (RXRG(var.2)_rc)
; oligos_6nt_mkv3_m46 versus MA1556.1_rc (RXRG(var.2)_rc); m=9/14; ncol2=14; w=9; offset=-5; strand=R; shift=1; score=0.429574; -rrGGTCrTGACCyy- ; cor=; Ncor= a 0 761.0 1235.0 37.0 64.0 119.0 26.0 1279.0 0.0 16.0 2117.0 99.0 0.0 0.0 79.0 0 c 0 226.0 57.0 176.0 63.0 78.0 2117.0 0.0 0.0 1.0 33.0 2117.0 2117.0 853.0 1071.0 0 g 0 996.0 882.0 2117.0 2117.0 214.0 55.0 838.0 15.0 2117.0 5.0 31.0 107.0 7.0 164.0 0 t 0 135.0 23.0 144.0 144.0 2117.0 64.0 0.0 2117.0 0.0 12.0 7.0 0.0 1264.0 803.0 0

MA1555.1_shift1 (RXRB(var.2))
; oligos_6nt_mkv3_m46 versus MA1555.1 (RXRB(var.2)); m=10/14; ncol2=14; w=9; offset=-5; strand=D; shift=1; score=0.422438; -rrGGTCrTGACCyy- ; cor=; Ncor= a 0 614.0 934.0 59.0 27.0 35.0 23.0 1207.0 11.0 92.0 1803.0 309.0 58.0 18.0 124.0 0 c 0 190.0 59.0 29.0 39.0 85.0 1803.0 15.0 59.0 35.0 53.0 1803.0 1803.0 866.0 868.0 0 g 0 851.0 870.0 1803.0 1803.0 157.0 41.0 596.0 0.0 1803.0 41.0 11.0 32.0 14.0 194.0 0 t 0 148.0 15.0 103.0 270.0 1803.0 123.0 7.0 1803.0 8.0 14.0 23.0 58.0 937.0 617.0 0

MA1538.1_shift0 (NR2F1(var.3))
; oligos_6nt_mkv3_m46 versus MA1538.1 (NR2F1(var.3)); m=11/14; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.421699; rrGGTCRtTGACCYy- ; cor=; Ncor= a 1651.0 2466.0 44.0 75.0 22.0 20.0 2473.0 813.0 0.0 81.0 3515.0 0.0 131.0 57.0 308.0 0 c 280.0 75.0 121.0 45.0 87.0 3515.0 58.0 855.0 89.0 15.0 95.0 3515.0 3515.0 949.0 1177.0 0 g 1271.0 1049.0 3515.0 3515.0 232.0 58.0 1041.0 858.0 52.0 3515.0 0.0 1.0 75.0 32.0 205.0 0 t 312.0 79.0 356.0 67.0 3515.0 171.0 4.0 990.0 3515.0 12.0 0.0 45.0 50.0 2566.0 1825.0 0

MA1539.1_shift0 (NR2F6(var.3))
; oligos_6nt_mkv3_m46 versus MA1539.1 (NR2F6(var.3)); m=12/14; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.414457; rAGGTCAbTGACCTy- ; cor=; Ncor= a 6349.0 8959.0 31.0 38.0 26.0 4.0 9114.0 2492.0 66.0 387.0 11749.0 159.0 82.0 23.0 910.0 0 c 727.0 26.0 1.0 12.0 78.0 11749.0 39.0 3333.0 333.0 206.0 255.0 11749.0 11749.0 2844.0 3745.0 0 g 3736.0 2789.0 11749.0 11749.0 253.0 216.0 2634.0 2972.0 67.0 11749.0 107.0 0.0 9.0 26.0 718.0 0 t 937.0 20.0 124.0 145.0 11749.0 443.0 46.0 2952.0 11749.0 9.0 3.0 36.0 24.0 8905.0 6376.0 0

MA1147.1_shift0 (NR4A2::RXRA)
; oligos_6nt_mkv3_m46 versus MA1147.1 (NR4A2::RXRA); m=13/14; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.404057; rrGGTCrtTGACCyc- ; cor=; Ncor= a 288.0 498.0 20.0 51.0 46.0 7.0 592.0 248.0 2.0 70.0 926.0 157.0 40.0 5.0 104.0 0 c 212.0 124.0 11.0 7.0 134.0 824.0 38.0 60.0 69.0 82.0 54.0 830.0 937.0 535.0 473.0 0 g 371.0 348.0 924.0 804.0 128.0 31.0 343.0 87.0 5.0 836.0 17.0 2.0 4.0 23.0 180.0 0 t 130.0 29.0 46.0 139.0 691.0 138.0 27.0 604.0 924.0 12.0 3.0 11.0 20.0 437.0 244.0 0

MA1151.1_rc_shift8 (RORC_rc)
; oligos_6nt_mkv3_m46 versus MA1151.1_rc (RORC_rc); m=14/14; ncol2=12; w=8; offset=2; strand=R; shift=8; score=0.402715; --------TGaCCyAc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 42.0 153.0 661.0 8.0 74.0 11.0 753.0 249.0 c 0 0 0 0 0 0 0 0 161.0 19.0 168.0 952.0 919.0 343.0 116.0 277.0 g 0 0 0 0 0 0 0 0 12.0 822.0 112.0 3.0 2.0 24.0 87.0 249.0 t 0 0 0 0 0 0 0 0 785.0 6.0 59.0 36.0 5.0 623.0 43.0 225.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv3_m46_shift6 (oligos_6nt_mkv3_m46oligos_6nt_mkv3_m46)				; oligos_6nt_mkv3_m46 (oligos_6nt_mkv3_m46oligos_6nt_mkv3_m46); m=0 (reference); ncol1=10; shift=6; ncol=16; ------ssTGACCAsm ; Alignment reference a 0 0 0 0 0 0 92 77 0 0 457 0 0 454 58 164 c 0 0 0 0 0 0 119 206 1 0 0 457 457 0 186 145 g 0 0 0 0 0 0 144 141 0 456 0 0 0 3 151 86 t 0 0 0 0 0 0 102 33 456 1 0 0 0 0 62 62
MA1535.1_rc_shift7 (NR2C1_rc)				; oligos_6nt_mkv3_m46 versus MA1535.1_rc (NR2C1_rc); m=1/14; ncol2=9; w=9; offset=1; strand=R; shift=7; score=0.716285; -------rTGACCyyk ; cor=; Ncor= a 0 0 0 0 0 0 0 2499.0 0.0 0.0 9622.0 0.0 297.0 55.0 1316.0 2225.0 c 0 0 0 0 0 0 0 2039.0 1716.0 321.0 271.0 9622.0 9622.0 4756.0 5587.0 1997.0 g 0 0 0 0 0 0 0 2786.0 0.0 9622.0 0.0 0.0 0.0 227.0 1225.0 2848.0 t 0 0 0 0 0 0 0 2298.0 9622.0 0.0 0.0 0.0 0.0 4866.0 4035.0 2552.0
MA1536.1_rc_shift7 (NR2C2(var.2)_rc)				; oligos_6nt_mkv3_m46 versus MA1536.1_rc (NR2C2(var.2)_rc); m=2/14; ncol2=8; w=8; offset=1; strand=R; shift=7; score=0.604426; -------dYGACCyy- ; cor=; Ncor= a 0 0 0 0 0 0 0 5122.0 0.0 4406.0 18628.0 4790.0 1341.0 0.0 2861.0 0 c 0 0 0 0 0 0 0 3684.0 6639.0 1643.0 1588.0 18628.0 18628.0 8395.0 6420.0 0 g 0 0 0 0 0 0 0 4757.0 0.0 18628.0 0.0 0.0 236.0 719.0 3111.0 0 t 0 0 0 0 0 0 0 5065.0 18628.0 0.0 0.0 0.0 0.0 10232.0 6236.0 0
MA0017.2_rc_shift4 (NR2F1_rc)				; oligos_6nt_mkv3_m46 versus MA0017.2_rc (NR2F1_rc); m=3/14; ncol2=13; w=10; offset=-2; strand=R; shift=4; score=0.570209; ----CyykTGACCYyt ; cor=; Ncor= a 0 0 0 0 3466.0 2427.0 1469.0 2270.0 0.0 0.0 12059.0 0.0 0.0 0.0 469.0 1948.0 c 0 0 0 0 36863.0 3886.0 4395.0 1618.0 91.0 0.0 0.0 12059.0 12059.0 3791.0 4869.0 1153.0 g 0 0 0 0 2912.0 2470.0 2966.0 3055.0 0.0 12059.0 0.0 0.0 30.0 0.0 387.0 1692.0 t 0 0 0 0 5681.0 3276.0 3229.0 5116.0 12059.0 0.0 0.0 0.0 0.0 8496.0 6333.0 7266.0
MA1150.1_rc_shift7 (RORB_rc)				; oligos_6nt_mkv3_m46 versus MA1150.1_rc (RORB_rc); m=4/14; ncol2=11; w=9; offset=1; strand=R; shift=7; score=0.566021; -------rTGACCyaa ; cor=; Ncor= a 0 0 0 0 0 0 0 324.0 26.0 155.0 776.0 27.0 52.0 26.0 547.0 403.0 c 0 0 0 0 0 0 0 145.0 63.0 17.0 50.0 928.0 907.0 358.0 235.0 201.0 g 0 0 0 0 0 0 0 326.0 15.0 781.0 146.0 13.0 25.0 14.0 165.0 162.0 t 0 0 0 0 0 0 0 205.0 896.0 47.0 28.0 32.0 16.0 602.0 53.0 233.0
MA1110.1_shift4 (NR1H4)				; oligos_6nt_mkv3_m46 versus MA1110.1 (NR1H4); m=5/14; ncol2=11; w=9; offset=-2; strand=D; shift=4; score=0.542712; ----tcAATGACCyh- ; cor=; Ncor= a 0 0 0 0 76.0 68.0 461.0 413.0 3.0 24.0 455.0 26.0 12.0 72.0 135.0 0 c 0 0 0 0 83.0 240.0 10.0 28.0 15.0 7.0 22.0 468.0 476.0 135.0 131.0 0 g 0 0 0 0 117.0 87.0 12.0 36.0 6.0 462.0 14.0 0.0 6.0 81.0 105.0 0 t 0 0 0 0 229.0 110.0 22.0 28.0 481.0 12.0 14.0 11.0 11.0 217.0 134.0 0
MA0014.3_shift3 (PAX5)				; oligos_6nt_mkv3_m46 versus MA0014.3 (PAX5); m=6/14; ncol2=12; w=9; offset=-3; strand=D; shift=3; score=0.53291; ---rrGCGTGACCmb- ; cor=; Ncor= a 0 0 0 540.0 625.0 18.0 18.0 111.0 94.0 16.0 1243.0 32.0 69.0 377.0 263.0 0 c 0 0 0 179.0 148.0 151.0 1276.0 35.0 88.0 37.0 39.0 1305.0 1081.0 405.0 403.0 0 g 0 0 0 578.0 354.0 1231.0 34.0 1243.0 30.0 1355.0 70.0 57.0 118.0 312.0 359.0 0 t 0 0 0 115.0 285.0 12.0 84.0 23.0 1200.0 4.0 60.0 18.0 144.0 318.0 387.0 0
MA0071.1_rc_shift8 (RORA_rc)				; oligos_6nt_mkv3_m46 versus MA0071.1_rc (RORA_rc); m=7/14; ncol2=10; w=8; offset=2; strand=R; shift=8; score=0.50902; --------TGACCTwg ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0.0 0.0 25.0 0.0 0.0 0.0 7.0 3.0 c 0 0 0 0 0 0 0 0 0.0 0.0 0.0 25.0 25.0 4.0 5.0 4.0 g 0 0 0 0 0 0 0 0 0.0 25.0 0.0 0.0 0.0 0.0 2.0 12.0 t 0 0 0 0 0 0 0 0 25.0 0.0 0.0 0.0 0.0 21.0 11.0 6.0
MA0067.1_rc_shift5 (Pax2_rc)				; oligos_6nt_mkv3_m46 versus MA0067.1_rc (Pax2_rc); m=8/14; ncol2=8; w=7; offset=-1; strand=R; shift=5; score=0.472032; -----vmrTGAcw--- ; cor=; Ncor= a 0 0 0 0 0 8.0 10.0 11.0 1.0 2.0 26.0 2.0 9.0 0 0 0 c 0 0 0 0 0 11.0 19.0 1.0 3.0 1.0 0.0 21.0 5.0 0 0 0 g 0 0 0 0 0 11.0 0.0 17.0 1.0 28.0 2.0 1.0 7.0 0 0 0 t 0 0 0 0 0 1.0 2.0 2.0 26.0 0.0 3.0 7.0 10.0 0 0 0
MA1556.1_rc_shift1 (RXRG(var.2)_rc)				; oligos_6nt_mkv3_m46 versus MA1556.1_rc (RXRG(var.2)_rc); m=9/14; ncol2=14; w=9; offset=-5; strand=R; shift=1; score=0.429574; -rrGGTCrTGACCyy- ; cor=; Ncor= a 0 761.0 1235.0 37.0 64.0 119.0 26.0 1279.0 0.0 16.0 2117.0 99.0 0.0 0.0 79.0 0 c 0 226.0 57.0 176.0 63.0 78.0 2117.0 0.0 0.0 1.0 33.0 2117.0 2117.0 853.0 1071.0 0 g 0 996.0 882.0 2117.0 2117.0 214.0 55.0 838.0 15.0 2117.0 5.0 31.0 107.0 7.0 164.0 0 t 0 135.0 23.0 144.0 144.0 2117.0 64.0 0.0 2117.0 0.0 12.0 7.0 0.0 1264.0 803.0 0
MA1555.1_shift1 (RXRB(var.2))				; oligos_6nt_mkv3_m46 versus MA1555.1 (RXRB(var.2)); m=10/14; ncol2=14; w=9; offset=-5; strand=D; shift=1; score=0.422438; -rrGGTCrTGACCyy- ; cor=; Ncor= a 0 614.0 934.0 59.0 27.0 35.0 23.0 1207.0 11.0 92.0 1803.0 309.0 58.0 18.0 124.0 0 c 0 190.0 59.0 29.0 39.0 85.0 1803.0 15.0 59.0 35.0 53.0 1803.0 1803.0 866.0 868.0 0 g 0 851.0 870.0 1803.0 1803.0 157.0 41.0 596.0 0.0 1803.0 41.0 11.0 32.0 14.0 194.0 0 t 0 148.0 15.0 103.0 270.0 1803.0 123.0 7.0 1803.0 8.0 14.0 23.0 58.0 937.0 617.0 0
MA1538.1_shift0 (NR2F1(var.3))				; oligos_6nt_mkv3_m46 versus MA1538.1 (NR2F1(var.3)); m=11/14; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.421699; rrGGTCRtTGACCYy- ; cor=; Ncor= a 1651.0 2466.0 44.0 75.0 22.0 20.0 2473.0 813.0 0.0 81.0 3515.0 0.0 131.0 57.0 308.0 0 c 280.0 75.0 121.0 45.0 87.0 3515.0 58.0 855.0 89.0 15.0 95.0 3515.0 3515.0 949.0 1177.0 0 g 1271.0 1049.0 3515.0 3515.0 232.0 58.0 1041.0 858.0 52.0 3515.0 0.0 1.0 75.0 32.0 205.0 0 t 312.0 79.0 356.0 67.0 3515.0 171.0 4.0 990.0 3515.0 12.0 0.0 45.0 50.0 2566.0 1825.0 0
MA1539.1_shift0 (NR2F6(var.3))				; oligos_6nt_mkv3_m46 versus MA1539.1 (NR2F6(var.3)); m=12/14; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.414457; rAGGTCAbTGACCTy- ; cor=; Ncor= a 6349.0 8959.0 31.0 38.0 26.0 4.0 9114.0 2492.0 66.0 387.0 11749.0 159.0 82.0 23.0 910.0 0 c 727.0 26.0 1.0 12.0 78.0 11749.0 39.0 3333.0 333.0 206.0 255.0 11749.0 11749.0 2844.0 3745.0 0 g 3736.0 2789.0 11749.0 11749.0 253.0 216.0 2634.0 2972.0 67.0 11749.0 107.0 0.0 9.0 26.0 718.0 0 t 937.0 20.0 124.0 145.0 11749.0 443.0 46.0 2952.0 11749.0 9.0 3.0 36.0 24.0 8905.0 6376.0 0
MA1147.1_shift0 (NR4A2::RXRA)				; oligos_6nt_mkv3_m46 versus MA1147.1 (NR4A2::RXRA); m=13/14; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.404057; rrGGTCrtTGACCyc- ; cor=; Ncor= a 288.0 498.0 20.0 51.0 46.0 7.0 592.0 248.0 2.0 70.0 926.0 157.0 40.0 5.0 104.0 0 c 212.0 124.0 11.0 7.0 134.0 824.0 38.0 60.0 69.0 82.0 54.0 830.0 937.0 535.0 473.0 0 g 371.0 348.0 924.0 804.0 128.0 31.0 343.0 87.0 5.0 836.0 17.0 2.0 4.0 23.0 180.0 0 t 130.0 29.0 46.0 139.0 691.0 138.0 27.0 604.0 924.0 12.0 3.0 11.0 20.0 437.0 244.0 0
MA1151.1_rc_shift8 (RORC_rc)				; oligos_6nt_mkv3_m46 versus MA1151.1_rc (RORC_rc); m=14/14; ncol2=12; w=8; offset=2; strand=R; shift=8; score=0.402715; --------TGaCCyAc ; cor=; Ncor= a 0 0 0 0 0 0 0 0 42.0 153.0 661.0 8.0 74.0 11.0 753.0 249.0 c 0 0 0 0 0 0 0 0 161.0 19.0 168.0 952.0 919.0 343.0 116.0 277.0 g 0 0 0 0 0 0 0 0 12.0 822.0 112.0 3.0 2.0 24.0 87.0 249.0 t 0 0 0 0 0 0 0 0 785.0 6.0 59.0 36.0 5.0 623.0 43.0 225.0