One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_7nt_mkv4_m13/peak-motifs_oligos_7nt_mkv4_m13.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_7nt_mkv4_m13/peak-motifs_oligos_7nt_mkv4_m13_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m13_shift4 ; 37 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m13_shift4 (oligos_7nt_mkv4_m13oligos_7nt_mkv4_m13)
; oligos_7nt_mkv4_m13 (oligos_7nt_mkv4_m13oligos_7nt_mkv4_m13); m=0 (reference); ncol1=11; shift=4; ncol=16; ----rvACAGATGsc- ; Alignment reference a 0 0 0 0 78 77 283 6 275 4 283 0 4 47 68 0 c 0 0 0 0 59 85 0 269 2 0 0 5 0 82 101 0 g 0 0 0 0 84 91 0 0 6 274 0 0 278 112 50 0 t 0 0 0 0 62 30 0 8 0 5 0 278 1 42 64 0

MA1638.1_shift5 (HAND2)
; oligos_7nt_mkv4_m13 versus MA1638.1 (HAND2); m=1/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.835192; -----amCAGATGby- ; cor=; Ncor= a 0 0 0 0 0 10136.0 8836.0 19.0 29222.0 12.0 30192.0 14.0 234.0 5217.0 6165.0 0 c 0 0 0 0 0 5564.0 11298.0 30062.0 410.0 42.0 30.0 2276.0 149.0 7690.0 10227.0 0 g 0 0 0 0 0 7463.0 6994.0 132.0 647.0 30144.0 38.0 31.0 29851.0 8878.0 6108.0 0 t 0 0 0 0 0 7120.0 3155.0 70.0 4.0 85.0 23.0 27962.0 49.0 8498.0 7783.0 0

MA1642.1_shift3 (NEUROG2(var.2))
; oligos_7nt_mkv4_m13 versus MA1642.1 (NEUROG2(var.2)); m=2/36; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.794319; ---rrraCAGATGGyv ; cor=; Ncor= a 0 0 0 8690.0 9047.0 12089.0 16448.0 278.0 33720.0 400.0 32746.0 649.0 280.0 1523.0 6665.0 9464.0 c 0 0 0 7353.0 6843.0 6467.0 8154.0 33559.0 211.0 793.0 952.0 904.0 205.0 2966.0 10441.0 9034.0 g 0 0 0 10813.0 10123.0 11114.0 8039.0 317.0 301.0 30392.0 418.0 323.0 33422.0 24998.0 7581.0 8709.0 t 0 0 0 7535.0 8378.0 4721.0 1750.0 237.0 159.0 2806.0 275.0 32515.0 484.0 4904.0 9704.0 7184.0

MA1109.1_shift4 (NEUROD1)
; oligos_7nt_mkv4_m13 versus MA1109.1 (NEUROD1); m=3/36; ncol2=13; w=11; offset=0; strand=D; shift=4; score=0.790608; ----graCAGATGGyr ; cor=; Ncor= a 0 0 0 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 c 0 0 0 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 g 0 0 0 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 t 0 0 0 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0

MA1618.1_shift4 (Ptf1a)
; oligos_7nt_mkv4_m13 versus MA1618.1 (Ptf1a); m=4/36; ncol2=13; w=11; offset=0; strand=D; shift=4; score=0.781177; ----dmaCAGATGttk ; cor=; Ncor= a 0 0 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 c 0 0 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 g 0 0 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 t 0 0 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0

MA0633.1_rc_shift5 (Twist2_rc)
; oligos_7nt_mkv4_m13 versus MA0633.1_rc (Twist2_rc); m=5/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.725064; -----mACATATGky- ; cor=; Ncor= a 0 0 0 0 0 365.0 745.0 0.0 1000.0 0.0 783.0 0.0 0.0 69.0 200.0 0 c 0 0 0 0 0 272.0 155.0 1000.0 0.0 211.0 0.0 0.0 0.0 69.0 298.0 0 g 0 0 0 0 0 181.0 50.0 0.0 0.0 0.0 217.0 0.0 1000.0 580.0 200.0 0 t 0 0 0 0 0 181.0 50.0 0.0 0.0 789.0 0.0 1000.0 0.0 282.0 302.0 0

MA1472.1_rc_shift5 (BHLHA15(var.2)_rc)
; oligos_7nt_mkv4_m13 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=6/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.720624; -----rrCAGCTGbt- ; cor=; Ncor= a 0 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 c 0 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 g 0 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 t 0 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0

MA0461.2_shift5 (Atoh1)
; oligos_7nt_mkv4_m13 versus MA0461.2 (Atoh1); m=7/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.708703; -----rmCATATGky- ; cor=; Ncor= a 0 0 0 0 0 655.0 523.0 42.0 1027.0 17.0 1027.0 22.0 2.0 34.0 128.0 0 c 0 0 0 0 0 108.0 334.0 1027.0 20.0 10.0 74.0 4.0 1.0 234.0 494.0 0 g 0 0 0 0 0 372.0 149.0 8.0 34.0 136.0 0.0 5.0 1027.0 376.0 126.0 0 t 0 0 0 0 0 59.0 21.0 0.0 0.0 1027.0 0.0 1027.0 31.0 384.0 533.0 0

MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)
; oligos_7nt_mkv4_m13 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=8/36; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.699104; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0

MA1619.1_rc_shift4 (Ptf1a(var.2)_rc)
; oligos_7nt_mkv4_m13 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=9/36; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.689437; ----rmaCAGCTGtky ; cor=; Ncor= a 0 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 c 0 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 g 0 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 t 0 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0

MA1570.1_shift5 (TFAP4(var.2))
; oligos_7nt_mkv4_m13 versus MA1570.1 (TFAP4(var.2)); m=10/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.68741; -----ahCAyrTGkt- ; cor=; Ncor= a 0 0 0 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 c 0 0 0 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 g 0 0 0 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 t 0 0 0 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0

MA1641.1_shift4 (MYF5)
; oligos_7nt_mkv4_m13 versus MA1641.1 (MYF5); m=11/36; ncol2=12; w=11; offset=0; strand=D; shift=4; score= 0.687; ----gvaCAGCTGtbc ; cor=; Ncor= a 0 0 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 c 0 0 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 g 0 0 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 t 0 0 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0

MA0499.2_rc_shift3 (MYOD1_rc)
; oligos_7nt_mkv4_m13 versus MA0499.2_rc (MYOD1_rc); m=12/36; ncol2=13; w=11; offset=-1; strand=R; shift=3; score=0.684998; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0

MA0669.1_shift5 (NEUROG2)
; oligos_7nt_mkv4_m13 versus MA0669.1 (NEUROG2); m=13/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.684488; -----raCATATGtY- ; cor=; Ncor= a 0 0 0 0 0 246.0 426.0 1.0 426.0 4.0 426.0 5.0 0.0 3.0 0.0 0 c 0 0 0 0 0 2.0 150.0 426.0 0.0 5.0 8.0 3.0 0.0 170.0 307.0 0 g 0 0 0 0 0 180.0 65.0 0.0 3.0 20.0 5.0 0.0 426.0 147.0 0.0 0 t 0 0 0 0 0 0.0 0.0 5.0 0.0 426.0 0.0 426.0 0.0 426.0 119.0 0

MA1467.1_shift5 (ATOH1(var.2))
; oligos_7nt_mkv4_m13 versus MA1467.1 (ATOH1(var.2)); m=14/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.684181; -----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0

MA1123.2_shift3 (TWIST1)
; oligos_7nt_mkv4_m13 versus MA1123.2 (TWIST1); m=15/36; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.682129; ---awwCCAGATGtbt ; cor=; Ncor= a 0 0 0 8329.0 7822.0 7536.0 3733.0 377.0 26713.0 440.0 24524.0 357.0 380.0 1801.0 4070.0 6823.0 c 0 0 0 5761.0 5530.0 4597.0 20412.0 26665.0 136.0 1320.0 1687.0 456.0 396.0 2919.0 7402.0 6561.0 g 0 0 0 6485.0 5722.0 5772.0 2336.0 117.0 210.0 24166.0 908.0 288.0 25975.0 4069.0 7273.0 6213.0 t 0 0 0 6758.0 8259.0 9428.0 852.0 174.0 274.0 1407.0 214.0 26232.0 582.0 18544.0 8588.0 7736.0

MA1524.1_rc_shift4 (MSGN1_rc)
; oligos_7nt_mkv4_m13 versus MA1524.1_rc (MSGN1_rc); m=16/36; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.678881; ----srmCAwwTGGys ; cor=; Ncor= a 0 0 0 0 1228.0 3104.0 3269.0 0.0 6373.0 2607.0 3950.0 0.0 0.0 726.0 408.0 1488.0 c 0 0 0 0 1781.0 1503.0 3104.0 6373.0 17.0 814.0 112.0 374.0 17.0 1613.0 3277.0 1615.0 g 0 0 0 0 1976.0 3269.0 1132.0 10.0 287.0 190.0 627.0 0.0 6373.0 6373.0 576.0 2080.0 t 0 0 0 0 1388.0 514.0 412.0 0.0 10.0 3766.0 2424.0 6373.0 0.0 663.0 3096.0 1190.0

MA1468.1_rc_shift5 (ATOH7_rc)
; oligos_7nt_mkv4_m13 versus MA1468.1_rc (ATOH7_rc); m=17/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.676637; -----rmCATATGkT- ; cor=; Ncor= a 0 0 0 0 0 312.0 291.0 0.0 712.0 0.0 712.0 58.0 0.0 45.0 62.0 0 c 0 0 0 0 0 2.0 261.0 712.0 25.0 78.0 59.0 102.0 0.0 154.0 142.0 0 g 0 0 0 0 0 400.0 155.0 0.0 25.0 180.0 106.0 0.0 712.0 211.0 97.0 0 t 0 0 0 0 0 17.0 5.0 0.0 0.0 712.0 15.0 712.0 0.0 302.0 712.0 0

MA0623.2_rc_shift5 (NEUROG1_rc)
; oligos_7nt_mkv4_m13 versus MA0623.2_rc (NEUROG1_rc); m=18/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.669338; -----rmCATATGty- ; cor=; Ncor= a 0 0 0 0 0 1673.0 1933.0 0.0 3518.0 0.0 3518.0 0.0 0.0 14.0 33.0 0 c 0 0 0 0 0 187.0 907.0 3518.0 0.0 80.0 0.0 63.0 8.0 729.0 1860.0 0 g 0 0 0 0 0 1844.0 655.0 0.0 86.0 0.0 114.0 0.0 3518.0 876.0 118.0 0 t 0 0 0 0 0 68.0 23.0 0.0 0.0 3518.0 4.0 3518.0 0.0 1898.0 1658.0 0

MA0820.1_rc_shift5 (FIGLA_rc)
; oligos_7nt_mkv4_m13 versus MA0820.1_rc (FIGLA_rc); m=19/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.668118; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0

MA1646.1_shift4 (OSR2)
; oligos_7nt_mkv4_m13 versus MA1646.1 (OSR2); m=20/36; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.665163; ----amaCAGAAGChr ; cor=; Ncor= a 0 0 0 0 4437.0 4244.0 8520.0 254.0 13599.0 216.0 11678.0 13725.0 416.0 666.0 4386.0 4048.0 c 0 0 0 0 3641.0 4206.0 2221.0 13937.0 197.0 229.0 703.0 288.0 170.0 12109.0 4274.0 3304.0 g 0 0 0 0 3246.0 3006.0 2117.0 406.0 737.0 14206.0 901.0 516.0 13982.0 841.0 2266.0 4726.0 t 0 0 0 0 3484.0 3352.0 1950.0 211.0 275.0 157.0 1526.0 279.0 240.0 1192.0 3882.0 2730.0

MA1559.1_shift5 (SNAI3)
; oligos_7nt_mkv4_m13 versus MA1559.1 (SNAI3); m=21/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.659055; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0

MA0521.1_shift5 (Tcf12)
; oligos_7nt_mkv4_m13 versus MA0521.1 (Tcf12); m=22/36; ncol2=11; w=10; offset=1; strand=D; shift=5; score=0.658812; -----rRCAGCTGswg ; cor=; Ncor= a 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 c 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 g 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 t 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0

MA1100.2_shift5 (ASCL1)
; oligos_7nt_mkv4_m13 versus MA1100.2 (ASCL1); m=23/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.652632; -----rrCAGCTGcy- ; cor=; Ncor= a 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 c 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 g 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 t 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0

MA0745.2_rc_shift3 (SNAI2_rc)
; oligos_7nt_mkv4_m13 versus MA0745.2_rc (SNAI2_rc); m=24/36; ncol2=13; w=11; offset=-1; strand=R; shift=3; score=0.64966; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0

MA1108.2_shift5 (MXI1)
; oligos_7nt_mkv4_m13 versus MA1108.2 (MXI1); m=25/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.649259; -----rvCACATGkc- ; cor=; Ncor= a 0 0 0 0 0 5786.0 6184.0 109.0 21870.0 10.0 20506.0 0.0 527.0 2833.0 4945.0 0 c 0 0 0 0 0 4724.0 5841.0 21382.0 1.0 21552.0 0.0 507.0 114.0 5329.0 6343.0 0 g 0 0 0 0 0 6326.0 6078.0 97.0 170.0 18.0 1542.0 0.0 21232.0 7228.0 5394.0 0 t 0 0 0 0 0 5212.0 3945.0 460.0 7.0 468.0 0.0 21541.0 175.0 6658.0 5366.0 0

MA0667.1_rc_shift5 (MYF6_rc)
; oligos_7nt_mkv4_m13 versus MA0667.1_rc (MYF6_rc); m=26/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.647245; -----RACAGyTGTT- ; cor=; Ncor= a 0 0 0 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 c 0 0 0 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 g 0 0 0 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 t 0 0 0 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0

MA0100.3_rc_shift5 (MYB_rc)
; oligos_7nt_mkv4_m13 versus MA0100.3_rc (MYB_rc); m=27/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.644526; -----kdCAGTTGvk- ; cor=; Ncor= a 0 0 0 0 0 352.0 497.0 0.0 1398.0 0.0 6.0 7.0 9.0 410.0 380.0 0 c 0 0 0 0 0 225.0 147.0 1516.0 68.0 0.0 0.0 39.0 5.0 397.0 300.0 0 g 0 0 0 0 0 528.0 482.0 3.0 60.0 1527.0 2.0 3.0 1513.0 428.0 422.0 0 t 0 0 0 0 0 422.0 401.0 8.0 1.0 0.0 1519.0 1478.0 0.0 292.0 425.0 0

MA0817.1_shift4 (BHLHE23)
; oligos_7nt_mkv4_m13 versus MA0817.1 (BHLHE23); m=28/36; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.643663; ----aAmCATATGkTw ; cor=; Ncor= a 0 0 0 0 2550.0 5005.0 2779.0 21.0 5005.0 0.0 5005.0 47.0 0.0 13.0 243.0 1523.0 c 0 0 0 0 686.0 55.0 1286.0 5005.0 0.0 4.0 5.0 115.0 4.0 1203.0 1468.0 911.0 g 0 0 0 0 858.0 890.0 932.0 0.0 67.0 1.0 3.0 5.0 5005.0 1771.0 92.0 964.0 t 0 0 0 0 912.0 44.0 8.0 0.0 17.0 5005.0 0.0 5005.0 7.0 2018.0 5005.0 1606.0

MA0668.1_rc_shift5 (NEUROD2_rc)
; oligos_7nt_mkv4_m13 versus MA0668.1_rc (NEUROD2_rc); m=29/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.643073; -----rmCATATGky- ; cor=; Ncor= a 0 0 0 0 0 685.0 548.0 112.0 1587.0 4.0 1587.0 52.0 0.0 0.0 95.0 0 c 0 0 0 0 0 101.0 705.0 1587.0 0.0 38.0 0.0 308.0 95.0 240.0 769.0 0 g 0 0 0 0 0 592.0 373.0 0.0 328.0 120.0 156.0 0.0 1587.0 875.0 119.0 0 t 0 0 0 0 0 209.0 0.0 0.0 0.0 1587.0 0.0 1587.0 0.0 527.0 604.0 0

MA0665.1_rc_shift5 (MSC_rc)
; oligos_7nt_mkv4_m13 versus MA0665.1_rc (MSC_rc); m=30/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.636647; -----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 c 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 g 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 t 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0

MA0091.1_rc_shift5 (TAL1::TCF3_rc)
; oligos_7nt_mkv4_m13 versus MA0091.1_rc (TAL1::TCF3_rc); m=31/36; ncol2=12; w=10; offset=1; strand=R; shift=5; score=0.620631; -----AmCAKMTGkTc ; cor=; Ncor= a 0 0 0 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 c 0 0 0 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 g 0 0 0 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 t 0 0 0 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0

MA0698.1_shift3 (ZBTB18)
; oligos_7nt_mkv4_m13 versus MA0698.1 (ZBTB18); m=32/36; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.618535; ---hatCCAGATGTkb ; cor=; Ncor= a 0 0 0 3561.0 7064.0 1177.0 3618.0 21.0 13670.0 3.0 13670.0 14.0 3.0 48.0 210.0 1725.0 c 0 0 0 4188.0 753.0 1937.0 13670.0 13670.0 5.0 245.0 1048.0 15.0 1.0 314.0 177.0 4042.0 g 0 0 0 2499.0 2535.0 5212.0 1899.0 3.0 33.0 13670.0 278.0 94.0 13670.0 36.0 5530.0 3876.0 t 0 0 0 3423.0 3319.0 13670.0 60.0 8.0 206.0 6.0 297.0 13670.0 1.0 13670.0 8140.0 4027.0

MA0607.1_rc_shift6 (Bhlha15_rc)
; oligos_7nt_mkv4_m13 versus MA0607.1_rc (Bhlha15_rc); m=33/36; ncol2=8; w=8; offset=2; strand=R; shift=6; score=0.605756; ------aCATATGs-- ; cor=; Ncor= a 0 0 0 0 0 0 614.0 0.0 999.0 0.0 799.0 0.0 0.0 1.0 0 0 c 0 0 0 0 0 0 154.0 999.0 0.0 0.0 200.0 0.0 0.0 286.0 0 0 g 0 0 0 0 0 0 231.0 0.0 0.0 200.0 0.0 0.0 999.0 571.0 0 0 t 0 0 0 0 0 0 1.0 0.0 0.0 799.0 0.0 999.0 0.0 143.0 0 0

MA1485.1_rc_shift3 (FERD3L_rc)
; oligos_7nt_mkv4_m13 versus MA1485.1_rc (FERD3L_rc); m=34/36; ncol2=14; w=11; offset=-1; strand=R; shift=3; score=0.599037; ---GTrACAGCTGkyr ; cor=; Ncor= a 0 0 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 c 0 0 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 g 0 0 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 t 0 0 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0

MA1621.1_rc_shift3 (Rbpjl_rc)
; oligos_7nt_mkv4_m13 versus MA1621.1_rc (Rbpjl_rc); m=35/36; ncol2=14; w=11; offset=-1; strand=R; shift=3; score=0.591656; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0

MA0743.2_shift0 (SCRT1)
; oligos_7nt_mkv4_m13 versus MA0743.2 (SCRT1); m=36/36; ncol2=16; w=11; offset=-4; strand=D; shift=0; score=0.482575; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv4_m13_shift4 (oligos_7nt_mkv4_m13oligos_7nt_mkv4_m13)				; oligos_7nt_mkv4_m13 (oligos_7nt_mkv4_m13oligos_7nt_mkv4_m13); m=0 (reference); ncol1=11; shift=4; ncol=16; ----rvACAGATGsc- ; Alignment reference a 0 0 0 0 78 77 283 6 275 4 283 0 4 47 68 0 c 0 0 0 0 59 85 0 269 2 0 0 5 0 82 101 0 g 0 0 0 0 84 91 0 0 6 274 0 0 278 112 50 0 t 0 0 0 0 62 30 0 8 0 5 0 278 1 42 64 0
MA1638.1_shift5 (HAND2)				; oligos_7nt_mkv4_m13 versus MA1638.1 (HAND2); m=1/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.835192; -----amCAGATGby- ; cor=; Ncor= a 0 0 0 0 0 10136.0 8836.0 19.0 29222.0 12.0 30192.0 14.0 234.0 5217.0 6165.0 0 c 0 0 0 0 0 5564.0 11298.0 30062.0 410.0 42.0 30.0 2276.0 149.0 7690.0 10227.0 0 g 0 0 0 0 0 7463.0 6994.0 132.0 647.0 30144.0 38.0 31.0 29851.0 8878.0 6108.0 0 t 0 0 0 0 0 7120.0 3155.0 70.0 4.0 85.0 23.0 27962.0 49.0 8498.0 7783.0 0
MA1642.1_shift3 (NEUROG2(var.2))				; oligos_7nt_mkv4_m13 versus MA1642.1 (NEUROG2(var.2)); m=2/36; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.794319; ---rrraCAGATGGyv ; cor=; Ncor= a 0 0 0 8690.0 9047.0 12089.0 16448.0 278.0 33720.0 400.0 32746.0 649.0 280.0 1523.0 6665.0 9464.0 c 0 0 0 7353.0 6843.0 6467.0 8154.0 33559.0 211.0 793.0 952.0 904.0 205.0 2966.0 10441.0 9034.0 g 0 0 0 10813.0 10123.0 11114.0 8039.0 317.0 301.0 30392.0 418.0 323.0 33422.0 24998.0 7581.0 8709.0 t 0 0 0 7535.0 8378.0 4721.0 1750.0 237.0 159.0 2806.0 275.0 32515.0 484.0 4904.0 9704.0 7184.0
MA1109.1_shift4 (NEUROD1)				; oligos_7nt_mkv4_m13 versus MA1109.1 (NEUROD1); m=3/36; ncol2=13; w=11; offset=0; strand=D; shift=4; score=0.790608; ----graCAGATGGyr ; cor=; Ncor= a 0 0 0 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 c 0 0 0 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 g 0 0 0 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 t 0 0 0 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0
MA1618.1_shift4 (Ptf1a)				; oligos_7nt_mkv4_m13 versus MA1618.1 (Ptf1a); m=4/36; ncol2=13; w=11; offset=0; strand=D; shift=4; score=0.781177; ----dmaCAGATGttk ; cor=; Ncor= a 0 0 0 0 4092.0 4476.0 8554.0 133.0 14064.0 250.0 12132.0 126.0 241.0 965.0 1511.0 3491.0 c 0 0 0 0 2989.0 3662.0 2747.0 14006.0 118.0 466.0 1724.0 224.0 122.0 2058.0 2341.0 3601.0 g 0 0 0 0 3661.0 3568.0 2414.0 130.0 153.0 13072.0 437.0 118.0 13868.0 2854.0 2295.0 3664.0 t 0 0 0 0 3699.0 2735.0 726.0 172.0 106.0 653.0 148.0 13973.0 210.0 8564.0 8294.0 3685.0
MA0633.1_rc_shift5 (Twist2_rc)				; oligos_7nt_mkv4_m13 versus MA0633.1_rc (Twist2_rc); m=5/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.725064; -----mACATATGky- ; cor=; Ncor= a 0 0 0 0 0 365.0 745.0 0.0 1000.0 0.0 783.0 0.0 0.0 69.0 200.0 0 c 0 0 0 0 0 272.0 155.0 1000.0 0.0 211.0 0.0 0.0 0.0 69.0 298.0 0 g 0 0 0 0 0 181.0 50.0 0.0 0.0 0.0 217.0 0.0 1000.0 580.0 200.0 0 t 0 0 0 0 0 181.0 50.0 0.0 0.0 789.0 0.0 1000.0 0.0 282.0 302.0 0
MA1472.1_rc_shift5 (BHLHA15(var.2)_rc)				; oligos_7nt_mkv4_m13 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=6/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.720624; -----rrCAGCTGbt- ; cor=; Ncor= a 0 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 c 0 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 g 0 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 t 0 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0
MA0461.2_shift5 (Atoh1)				; oligos_7nt_mkv4_m13 versus MA0461.2 (Atoh1); m=7/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.708703; -----rmCATATGky- ; cor=; Ncor= a 0 0 0 0 0 655.0 523.0 42.0 1027.0 17.0 1027.0 22.0 2.0 34.0 128.0 0 c 0 0 0 0 0 108.0 334.0 1027.0 20.0 10.0 74.0 4.0 1.0 234.0 494.0 0 g 0 0 0 0 0 372.0 149.0 8.0 34.0 136.0 0.0 5.0 1027.0 376.0 126.0 0 t 0 0 0 0 0 59.0 21.0 0.0 0.0 1027.0 0.0 1027.0 31.0 384.0 533.0 0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)				; oligos_7nt_mkv4_m13 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=8/36; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.699104; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0
MA1619.1_rc_shift4 (Ptf1a(var.2)_rc)				; oligos_7nt_mkv4_m13 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=9/36; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.689437; ----rmaCAGCTGtky ; cor=; Ncor= a 0 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 c 0 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 g 0 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 t 0 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0
MA1570.1_shift5 (TFAP4(var.2))				; oligos_7nt_mkv4_m13 versus MA1570.1 (TFAP4(var.2)); m=10/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.68741; -----ahCAyrTGkt- ; cor=; Ncor= a 0 0 0 0 0 479.0 217.0 0.0 479.0 0.0 479.0 0.0 0.0 103.0 60.0 0 c 0 0 0 0 0 130.0 144.0 479.0 0.0 220.0 149.0 0.0 3.0 14.0 210.0 0 g 0 0 0 0 0 197.0 0.0 0.0 14.0 161.0 287.0 0.0 479.0 156.0 110.0 0 t 0 0 0 0 0 39.0 129.0 0.0 0.0 479.0 0.0 479.0 0.0 206.0 479.0 0
MA1641.1_shift4 (MYF5)				; oligos_7nt_mkv4_m13 versus MA1641.1 (MYF5); m=11/36; ncol2=12; w=11; offset=0; strand=D; shift=4; score= 0.687; ----gvaCAGCTGtbc ; cor=; Ncor= a 0 0 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 c 0 0 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 g 0 0 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 t 0 0 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0
MA0499.2_rc_shift3 (MYOD1_rc)				; oligos_7nt_mkv4_m13 versus MA0499.2_rc (MYOD1_rc); m=12/36; ncol2=13; w=11; offset=-1; strand=R; shift=3; score=0.684998; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0
MA0669.1_shift5 (NEUROG2)				; oligos_7nt_mkv4_m13 versus MA0669.1 (NEUROG2); m=13/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.684488; -----raCATATGtY- ; cor=; Ncor= a 0 0 0 0 0 246.0 426.0 1.0 426.0 4.0 426.0 5.0 0.0 3.0 0.0 0 c 0 0 0 0 0 2.0 150.0 426.0 0.0 5.0 8.0 3.0 0.0 170.0 307.0 0 g 0 0 0 0 0 180.0 65.0 0.0 3.0 20.0 5.0 0.0 426.0 147.0 0.0 0 t 0 0 0 0 0 0.0 0.0 5.0 0.0 426.0 0.0 426.0 0.0 426.0 119.0 0
MA1467.1_shift5 (ATOH1(var.2))				; oligos_7nt_mkv4_m13 versus MA1467.1 (ATOH1(var.2)); m=14/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.684181; -----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0
MA1123.2_shift3 (TWIST1)				; oligos_7nt_mkv4_m13 versus MA1123.2 (TWIST1); m=15/36; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.682129; ---awwCCAGATGtbt ; cor=; Ncor= a 0 0 0 8329.0 7822.0 7536.0 3733.0 377.0 26713.0 440.0 24524.0 357.0 380.0 1801.0 4070.0 6823.0 c 0 0 0 5761.0 5530.0 4597.0 20412.0 26665.0 136.0 1320.0 1687.0 456.0 396.0 2919.0 7402.0 6561.0 g 0 0 0 6485.0 5722.0 5772.0 2336.0 117.0 210.0 24166.0 908.0 288.0 25975.0 4069.0 7273.0 6213.0 t 0 0 0 6758.0 8259.0 9428.0 852.0 174.0 274.0 1407.0 214.0 26232.0 582.0 18544.0 8588.0 7736.0
MA1524.1_rc_shift4 (MSGN1_rc)				; oligos_7nt_mkv4_m13 versus MA1524.1_rc (MSGN1_rc); m=16/36; ncol2=12; w=11; offset=0; strand=R; shift=4; score=0.678881; ----srmCAwwTGGys ; cor=; Ncor= a 0 0 0 0 1228.0 3104.0 3269.0 0.0 6373.0 2607.0 3950.0 0.0 0.0 726.0 408.0 1488.0 c 0 0 0 0 1781.0 1503.0 3104.0 6373.0 17.0 814.0 112.0 374.0 17.0 1613.0 3277.0 1615.0 g 0 0 0 0 1976.0 3269.0 1132.0 10.0 287.0 190.0 627.0 0.0 6373.0 6373.0 576.0 2080.0 t 0 0 0 0 1388.0 514.0 412.0 0.0 10.0 3766.0 2424.0 6373.0 0.0 663.0 3096.0 1190.0
MA1468.1_rc_shift5 (ATOH7_rc)				; oligos_7nt_mkv4_m13 versus MA1468.1_rc (ATOH7_rc); m=17/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.676637; -----rmCATATGkT- ; cor=; Ncor= a 0 0 0 0 0 312.0 291.0 0.0 712.0 0.0 712.0 58.0 0.0 45.0 62.0 0 c 0 0 0 0 0 2.0 261.0 712.0 25.0 78.0 59.0 102.0 0.0 154.0 142.0 0 g 0 0 0 0 0 400.0 155.0 0.0 25.0 180.0 106.0 0.0 712.0 211.0 97.0 0 t 0 0 0 0 0 17.0 5.0 0.0 0.0 712.0 15.0 712.0 0.0 302.0 712.0 0
MA0623.2_rc_shift5 (NEUROG1_rc)				; oligos_7nt_mkv4_m13 versus MA0623.2_rc (NEUROG1_rc); m=18/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.669338; -----rmCATATGty- ; cor=; Ncor= a 0 0 0 0 0 1673.0 1933.0 0.0 3518.0 0.0 3518.0 0.0 0.0 14.0 33.0 0 c 0 0 0 0 0 187.0 907.0 3518.0 0.0 80.0 0.0 63.0 8.0 729.0 1860.0 0 g 0 0 0 0 0 1844.0 655.0 0.0 86.0 0.0 114.0 0.0 3518.0 876.0 118.0 0 t 0 0 0 0 0 68.0 23.0 0.0 0.0 3518.0 4.0 3518.0 0.0 1898.0 1658.0 0
MA0820.1_rc_shift5 (FIGLA_rc)				; oligos_7nt_mkv4_m13 versus MA0820.1_rc (FIGLA_rc); m=19/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.668118; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0
MA1646.1_shift4 (OSR2)				; oligos_7nt_mkv4_m13 versus MA1646.1 (OSR2); m=20/36; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.665163; ----amaCAGAAGChr ; cor=; Ncor= a 0 0 0 0 4437.0 4244.0 8520.0 254.0 13599.0 216.0 11678.0 13725.0 416.0 666.0 4386.0 4048.0 c 0 0 0 0 3641.0 4206.0 2221.0 13937.0 197.0 229.0 703.0 288.0 170.0 12109.0 4274.0 3304.0 g 0 0 0 0 3246.0 3006.0 2117.0 406.0 737.0 14206.0 901.0 516.0 13982.0 841.0 2266.0 4726.0 t 0 0 0 0 3484.0 3352.0 1950.0 211.0 275.0 157.0 1526.0 279.0 240.0 1192.0 3882.0 2730.0
MA1559.1_shift5 (SNAI3)				; oligos_7nt_mkv4_m13 versus MA1559.1 (SNAI3); m=21/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.659055; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0
MA0521.1_shift5 (Tcf12)				; oligos_7nt_mkv4_m13 versus MA0521.1 (Tcf12); m=22/36; ncol2=11; w=10; offset=1; strand=D; shift=5; score=0.658812; -----rRCAGCTGswg ; cor=; Ncor= a 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 c 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 g 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 t 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0
MA1100.2_shift5 (ASCL1)				; oligos_7nt_mkv4_m13 versus MA1100.2 (ASCL1); m=23/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.652632; -----rrCAGCTGcy- ; cor=; Ncor= a 0 0 0 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 c 0 0 0 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 g 0 0 0 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 t 0 0 0 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0
MA0745.2_rc_shift3 (SNAI2_rc)				; oligos_7nt_mkv4_m13 versus MA0745.2_rc (SNAI2_rc); m=24/36; ncol2=13; w=11; offset=-1; strand=R; shift=3; score=0.64966; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0
MA1108.2_shift5 (MXI1)				; oligos_7nt_mkv4_m13 versus MA1108.2 (MXI1); m=25/36; ncol2=10; w=10; offset=1; strand=D; shift=5; score=0.649259; -----rvCACATGkc- ; cor=; Ncor= a 0 0 0 0 0 5786.0 6184.0 109.0 21870.0 10.0 20506.0 0.0 527.0 2833.0 4945.0 0 c 0 0 0 0 0 4724.0 5841.0 21382.0 1.0 21552.0 0.0 507.0 114.0 5329.0 6343.0 0 g 0 0 0 0 0 6326.0 6078.0 97.0 170.0 18.0 1542.0 0.0 21232.0 7228.0 5394.0 0 t 0 0 0 0 0 5212.0 3945.0 460.0 7.0 468.0 0.0 21541.0 175.0 6658.0 5366.0 0
MA0667.1_rc_shift5 (MYF6_rc)				; oligos_7nt_mkv4_m13 versus MA0667.1_rc (MYF6_rc); m=26/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.647245; -----RACAGyTGTT- ; cor=; Ncor= a 0 0 0 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 c 0 0 0 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 g 0 0 0 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 t 0 0 0 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0
MA0100.3_rc_shift5 (MYB_rc)				; oligos_7nt_mkv4_m13 versus MA0100.3_rc (MYB_rc); m=27/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.644526; -----kdCAGTTGvk- ; cor=; Ncor= a 0 0 0 0 0 352.0 497.0 0.0 1398.0 0.0 6.0 7.0 9.0 410.0 380.0 0 c 0 0 0 0 0 225.0 147.0 1516.0 68.0 0.0 0.0 39.0 5.0 397.0 300.0 0 g 0 0 0 0 0 528.0 482.0 3.0 60.0 1527.0 2.0 3.0 1513.0 428.0 422.0 0 t 0 0 0 0 0 422.0 401.0 8.0 1.0 0.0 1519.0 1478.0 0.0 292.0 425.0 0
MA0817.1_shift4 (BHLHE23)				; oligos_7nt_mkv4_m13 versus MA0817.1 (BHLHE23); m=28/36; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.643663; ----aAmCATATGkTw ; cor=; Ncor= a 0 0 0 0 2550.0 5005.0 2779.0 21.0 5005.0 0.0 5005.0 47.0 0.0 13.0 243.0 1523.0 c 0 0 0 0 686.0 55.0 1286.0 5005.0 0.0 4.0 5.0 115.0 4.0 1203.0 1468.0 911.0 g 0 0 0 0 858.0 890.0 932.0 0.0 67.0 1.0 3.0 5.0 5005.0 1771.0 92.0 964.0 t 0 0 0 0 912.0 44.0 8.0 0.0 17.0 5005.0 0.0 5005.0 7.0 2018.0 5005.0 1606.0
MA0668.1_rc_shift5 (NEUROD2_rc)				; oligos_7nt_mkv4_m13 versus MA0668.1_rc (NEUROD2_rc); m=29/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.643073; -----rmCATATGky- ; cor=; Ncor= a 0 0 0 0 0 685.0 548.0 112.0 1587.0 4.0 1587.0 52.0 0.0 0.0 95.0 0 c 0 0 0 0 0 101.0 705.0 1587.0 0.0 38.0 0.0 308.0 95.0 240.0 769.0 0 g 0 0 0 0 0 592.0 373.0 0.0 328.0 120.0 156.0 0.0 1587.0 875.0 119.0 0 t 0 0 0 0 0 209.0 0.0 0.0 0.0 1587.0 0.0 1587.0 0.0 527.0 604.0 0
MA0665.1_rc_shift5 (MSC_rc)				; oligos_7nt_mkv4_m13 versus MA0665.1_rc (MSC_rc); m=30/36; ncol2=10; w=10; offset=1; strand=R; shift=5; score=0.636647; -----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 c 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 g 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 t 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0
MA0091.1_rc_shift5 (TAL1::TCF3_rc)				; oligos_7nt_mkv4_m13 versus MA0091.1_rc (TAL1::TCF3_rc); m=31/36; ncol2=12; w=10; offset=1; strand=R; shift=5; score=0.620631; -----AmCAKMTGkTc ; cor=; Ncor= a 0 0 0 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 c 0 0 0 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 g 0 0 0 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 t 0 0 0 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0
MA0698.1_shift3 (ZBTB18)				; oligos_7nt_mkv4_m13 versus MA0698.1 (ZBTB18); m=32/36; ncol2=13; w=11; offset=-1; strand=D; shift=3; score=0.618535; ---hatCCAGATGTkb ; cor=; Ncor= a 0 0 0 3561.0 7064.0 1177.0 3618.0 21.0 13670.0 3.0 13670.0 14.0 3.0 48.0 210.0 1725.0 c 0 0 0 4188.0 753.0 1937.0 13670.0 13670.0 5.0 245.0 1048.0 15.0 1.0 314.0 177.0 4042.0 g 0 0 0 2499.0 2535.0 5212.0 1899.0 3.0 33.0 13670.0 278.0 94.0 13670.0 36.0 5530.0 3876.0 t 0 0 0 3423.0 3319.0 13670.0 60.0 8.0 206.0 6.0 297.0 13670.0 1.0 13670.0 8140.0 4027.0
MA0607.1_rc_shift6 (Bhlha15_rc)				; oligos_7nt_mkv4_m13 versus MA0607.1_rc (Bhlha15_rc); m=33/36; ncol2=8; w=8; offset=2; strand=R; shift=6; score=0.605756; ------aCATATGs-- ; cor=; Ncor= a 0 0 0 0 0 0 614.0 0.0 999.0 0.0 799.0 0.0 0.0 1.0 0 0 c 0 0 0 0 0 0 154.0 999.0 0.0 0.0 200.0 0.0 0.0 286.0 0 0 g 0 0 0 0 0 0 231.0 0.0 0.0 200.0 0.0 0.0 999.0 571.0 0 0 t 0 0 0 0 0 0 1.0 0.0 0.0 799.0 0.0 999.0 0.0 143.0 0 0
MA1485.1_rc_shift3 (FERD3L_rc)				; oligos_7nt_mkv4_m13 versus MA1485.1_rc (FERD3L_rc); m=34/36; ncol2=14; w=11; offset=-1; strand=R; shift=3; score=0.599037; ---GTrACAGCTGkyr ; cor=; Ncor= a 0 0 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 c 0 0 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 g 0 0 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 t 0 0 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0
MA1621.1_rc_shift3 (Rbpjl_rc)				; oligos_7nt_mkv4_m13 versus MA1621.1_rc (Rbpjl_rc); m=35/36; ncol2=14; w=11; offset=-1; strand=R; shift=3; score=0.591656; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0
MA0743.2_shift0 (SCRT1)				; oligos_7nt_mkv4_m13 versus MA0743.2 (SCRT1); m=36/36; ncol2=16; w=11; offset=-4; strand=D; shift=0; score=0.482575; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0