One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_7nt_mkv4_m18/peak-motifs_oligos_7nt_mkv4_m18.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_7nt_mkv4_m18/peak-motifs_oligos_7nt_mkv4_m18_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m18_shift6 ; 45 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_7nt_mkv4_m18_shift6 (oligos_7nt_mkv4_m18oligos_7nt_mkv4_m18)     
; oligos_7nt_mkv4_m18 (oligos_7nt_mkv4_m18oligos_7nt_mkv4_m18); m=0 (reference); ncol1=12; shift=6; ncol=20; ------gvTGACCTCAsc--
; Alignment reference
a	0	0	0	0	0	0	45	57	22	9	218	2	10	2	6	206	30	44	0	0
c	0	0	0	0	0	0	50	58	4	4	0	212	174	2	204	2	58	84	0	0
g	0	0	0	0	0	0	81	84	22	202	1	2	30	4	3	12	80	50	0	0
t	0	0	0	0	0	0	44	21	172	5	1	4	6	212	7	0	52	42	0	0
MA0605.2_shift6 (ATF3) 
; oligos_7nt_mkv4_m18 versus MA0605.2 (ATF3); m=1/44; ncol2=12; w=12; offset=0; strand=D; shift=6; score=0.840409; ------grTGACGTCAyc--
; cor=; Ncor=
a	0	0	0	0	0	0	8505.0	24741.0	0.0	0.0	40546.0	0.0	891.0	0.0	1520.0	40546.0	0.0	6919.0	0	0
c	0	0	0	0	0	0	8220.0	1354.0	0.0	0.0	0.0	40546.0	0.0	0.0	40546.0	0.0	15737.0	16820.0	0	0
g	0	0	0	0	0	0	16894.0	15805.0	1.0	40546.0	0.0	0.0	40546.0	0.0	0.0	0.0	1094.0	8242.0	0	0
t	0	0	0	0	0	0	6926.0	0.0	40546.0	1366.0	0.0	556.0	0.0	40546.0	0.0	0.0	24808.0	8564.0	0	0
MA1632.1_rc_shift6 (ATF2_rc) 
; oligos_7nt_mkv4_m18 versus MA1632.1_rc (ATF2_rc); m=2/44; ncol2=13; w=12; offset=0; strand=R; shift=6; score=0.833109; ------raTGACvTCATyw-
; cor=; Ncor=
a	0	0	0	0	0	0	18336.0	36321.0	509.0	909.0	57832.0	261.0	18166.0	975.0	2498.0	57651.0	1438.0	11021.0	16567.0	0
c	0	0	0	0	0	0	11553.0	5971.0	768.0	649.0	283.0	56882.0	23207.0	262.0	55318.0	328.0	6229.0	18924.0	11910.0	0
g	0	0	0	0	0	0	15785.0	14153.0	218.0	53464.0	316.0	886.0	16970.0	396.0	408.0	899.0	3145.0	10292.0	10795.0	0
t	0	0	0	0	0	0	13720.0	2949.0	57899.0	4372.0	963.0	1365.0	1051.0	57761.0	1170.0	516.0	48582.0	19157.0	20122.0	0
MA1475.1_shift6 (CREB3L4(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1475.1 (CREB3L4(var.2)); m=3/44; ncol2=12; w=12; offset=0; strand=D; shift=6; score=0.827147; ------grTGACGTCAyc--
; cor=; Ncor=
a	0	0	0	0	0	0	229.0	504.0	0.0	35.0	1293.0	0.0	81.0	16.0	176.0	1293.0	116.0	234.0	0	0
c	0	0	0	0	0	0	224.0	221.0	138.0	265.0	27.0	1293.0	3.0	100.0	1293.0	35.0	748.0	582.0	0	0
g	0	0	0	0	0	0	570.0	790.0	48.0	1293.0	83.0	6.0	1293.0	36.0	227.0	153.0	282.0	265.0	0	0
t	0	0	0	0	0	0	270.0	75.0	1293.0	258.0	39.0	43.0	0.0	1293.0	59.0	40.0	546.0	212.0	0	0
MA1139.1_rc_shift6 (FOSL2::JUNB(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA1139.1_rc (FOSL2::JUNB(var.2)_rc); m=4/44; ncol2=12; w=12; offset=0; strand=R; shift=6; score=0.818353; ------krTGACGTCAym--
; cor=; Ncor=
a	0	0	0	0	0	0	228.0	639.0	8.0	13.0	972.0	10.0	74.0	10.0	187.0	969.0	29.0	263.0	0	0
c	0	0	0	0	0	0	151.0	67.0	19.0	23.0	6.0	900.0	17.0	13.0	780.0	6.0	268.0	359.0	0	0
g	0	0	0	0	0	0	358.0	266.0	5.0	778.0	12.0	16.0	899.0	5.0	21.0	17.0	65.0	150.0	0	0
t	0	0	0	0	0	0	263.0	28.0	968.0	186.0	10.0	74.0	10.0	972.0	12.0	8.0	638.0	227.0	0	0
MA0656.1_rc_shift6 (JDP2(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA0656.1_rc (JDP2(var.2)_rc); m=5/44; ncol2=12; w=12; offset=0; strand=R; shift=6; score=0.817662; ------grTGACGTCATc--
; cor=; Ncor=
a	0	0	0	0	0	0	3778.0	12283.0	0.0	1.0	24403.0	2.0	338.0	6.0	1939.0	24403.0	17.0	3623.0	0	0
c	0	0	0	0	0	0	4124.0	835.0	9.0	4.0	7.0	24403.0	6.0	6.0	24403.0	3.0	1403.0	11036.0	0	0
g	0	0	0	0	0	0	12117.0	12119.0	10.0	24403.0	24.0	5.0	24403.0	7.0	0.0	9.0	1319.0	5483.0	0	0
t	0	0	0	0	0	0	4383.0	47.0	24403.0	1777.0	15.0	587.0	5.0	24403.0	11.0	3.0	24403.0	4260.0	0	0
MA1140.2_rc_shift6 (JUNB(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA1140.2_rc (JUNB(var.2)_rc); m=6/44; ncol2=12; w=12; offset=0; strand=R; shift=6; score=0.807561; ------grTGACGTCATc--
; cor=; Ncor=
a	0	0	0	0	0	0	35.0	191.0	1.0	1.0	305.0	0.0	2.0	0.0	13.0	305.0	6.0	47.0	0	0
c	0	0	0	0	0	0	43.0	10.0	1.0	3.0	1.0	305.0	0.0	1.0	305.0	4.0	15.0	162.0	0	0
g	0	0	0	0	0	0	187.0	114.0	2.0	305.0	3.0	1.0	305.0	1.0	0.0	1.0	7.0	46.0	0	0
t	0	0	0	0	0	0	40.0	0.0	305.0	17.0	1.0	0.0	0.0	305.0	0.0	1.0	305.0	50.0	0	0
MA1133.1_shift6 (JUN::JUNB(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1133.1 (JUN::JUNB(var.2)); m=7/44; ncol2=12; w=12; offset=0; strand=D; shift=6; score=0.806548; ------krTGACGTCATb--
; cor=; Ncor=
a	0	0	0	0	0	0	54.0	376.0	58.0	51.0	787.0	23.0	55.0	30.0	91.0	919.0	33.0	212.0	0	0
c	0	0	0	0	0	0	132.0	108.0	43.0	28.0	22.0	862.0	36.0	27.0	834.0	19.0	125.0	254.0	0	0
g	0	0	0	0	0	0	358.0	486.0	25.0	703.0	63.0	47.0	867.0	40.0	35.0	35.0	130.0	255.0	0	0
t	0	0	0	0	0	0	457.0	30.0	875.0	218.0	129.0	68.0	42.0	903.0	40.0	26.0	712.0	278.0	0	0
MA0018.4_rc_shift6 (CREB1_rc) 
; oligos_7nt_mkv4_m18 versus MA0018.4_rc (CREB1_rc); m=8/44; ncol2=13; w=12; offset=0; strand=R; shift=6; score=0.806412; ------drTGACATCAyhw-
; cor=; Ncor=
a	0	0	0	0	0	0	21630.0	32873.0	1485.0	1852.0	68217.0	1831.0	56875.0	2279.0	2963.0	75554.0	10149.0	22306.0	24750.0	0
c	0	0	0	0	0	0	13550.0	14802.0	1222.0	2177.0	1207.0	74401.0	6339.0	2012.0	72555.0	1109.0	27796.0	21104.0	15570.0	0
g	0	0	0	0	0	0	21876.0	21582.0	1018.0	71982.0	1231.0	1895.0	14144.0	1748.0	2298.0	970.0	13032.0	15046.0	17829.0	0
t	0	0	0	0	0	0	22488.0	10287.0	75819.0	3533.0	8889.0	1417.0	2186.0	73505.0	1728.0	1911.0	28567.0	21088.0	21395.0	0
MA0840.1_rc_shift6 (Creb5_rc) 
; oligos_7nt_mkv4_m18 versus MA0840.1_rc (Creb5_rc); m=9/44; ncol2=12; w=12; offset=0; strand=R; shift=6; score=0.796422; ------rrTGACGTCATy--
; cor=; Ncor=
a	0	0	0	0	0	0	1126.0	1843.0	2.0	4.0	3704.0	0.0	57.0	10.0	918.0	3704.0	40.0	695.0	0	0
c	0	0	0	0	0	0	372.0	77.0	0.0	0.0	0.0	3704.0	0.0	1.0	3704.0	0.0	256.0	1066.0	0	0
g	0	0	0	0	0	0	1466.0	1861.0	0.0	3704.0	6.0	0.0	3704.0	0.0	6.0	16.0	227.0	740.0	0	0
t	0	0	0	0	0	0	740.0	25.0	3704.0	917.0	18.0	151.0	0.0	3704.0	13.0	6.0	3704.0	1202.0	0	0
MA1131.1_shift6 (FOSL2::JUN(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1131.1 (FOSL2::JUN(var.2)); m=10/44; ncol2=11; w=11; offset=0; strand=D; shift=6; score=0.755311; ------grTGACGTmAt---
; cor=; Ncor=
a	0	0	0	0	0	0	222.0	633.0	6.0	7.0	963.0	11.0	92.0	14.0	351.0	961.0	38.0	0	0	0
c	0	0	0	0	0	0	94.0	30.0	8.0	14.0	6.0	906.0	45.0	70.0	625.0	10.0	218.0	0	0	0
g	0	0	0	0	0	0	459.0	323.0	8.0	917.0	9.0	22.0	845.0	9.0	16.0	13.0	166.0	0	0	0
t	0	0	0	0	0	0	224.0	15.0	978.0	62.0	23.0	61.0	17.0	908.0	8.0	15.0	578.0	0	0	0
MA1127.1_rc_shift7 (FOSB::JUN_rc) 
; oligos_7nt_mkv4_m18 versus MA1127.1_rc (FOSB::JUN_rc); m=11/44; ncol2=11; w=11; offset=1; strand=R; shift=7; score=0.748381; -------rTGACGTCAtc--
; cor=; Ncor=
a	0	0	0	0	0	0	0	593.0	21.0	36.0	904.0	14.0	42.0	20.0	100.0	965.0	48.0	162.0	0	0
c	0	0	0	0	0	0	0	53.0	14.0	20.0	14.0	897.0	25.0	17.0	872.0	12.0	216.0	575.0	0	0
g	0	0	0	0	0	0	0	261.0	16.0	697.0	57.0	14.0	886.0	8.0	10.0	10.0	87.0	70.0	0	0
t	0	0	0	0	0	0	0	92.0	949.0	247.0	25.0	75.0	48.0	954.0	17.0	12.0	649.0	193.0	0	0
MA0834.1_rc_shift5 (ATF7_rc) 
; oligos_7nt_mkv4_m18 versus MA0834.1_rc (ATF7_rc); m=12/44; ncol2=14; w=12; offset=-1; strand=R; shift=5; score=0.690959; -----bkRTGACGTCATyg-
; cor=; Ncor=
a	0	0	0	0	0	2839.0	3456.0	19329.0	11.0	22.0	19329.0	4.0	68.0	12.0	1759.0	19329.0	41.0	4461.0	4641.0	0
c	0	0	0	0	0	5892.0	2129.0	440.0	49.0	51.0	77.0	19329.0	33.0	58.0	19329.0	43.0	3772.0	7299.0	4161.0	0
g	0	0	0	0	0	4920.0	8116.0	7305.0	2.0	19329.0	16.0	9.0	19329.0	8.0	7.0	4.0	368.0	2440.0	6606.0	0
t	0	0	0	0	0	5680.0	5628.0	82.0	19329.0	2698.0	25.0	79.0	20.0	19329.0	26.0	11.0	19329.0	5130.0	3922.0	0
MA1111.1_rc_shift6 (NR2F2_rc) 
; oligos_7nt_mkv4_m18 versus MA1111.1_rc (NR2F2_rc); m=13/44; ncol2=11; w=11; offset=0; strand=R; shift=6; score=0.677212; ------ytTGACCTTtr---
; cor=; Ncor=
a	0	0	0	0	0	0	401.0	524.0	34.0	170.0	2135.0	27.0	43.0	23.0	206.0	401.0	606.0	0	0	0
c	0	0	0	0	0	0	572.0	544.0	43.0	26.0	30.0	2132.0	2108.0	82.0	173.0	320.0	418.0	0	0	0
g	0	0	0	0	0	0	384.0	503.0	16.0	1978.0	22.0	12.0	16.0	15.0	37.0	456.0	692.0	0	0	0
t	0	0	0	0	0	0	847.0	633.0	2111.0	30.0	17.0	33.0	37.0	2084.0	1788.0	1027.0	488.0	0	0	0
MA0492.1_rc_shift6 (JUND(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA0492.1_rc (JUND(var.2)_rc); m=14/44; ncol2=15; w=12; offset=0; strand=R; shift=6; score=0.673681; ------kATKACrTCATywy
; cor=; Ncor=
a	0	0	0	0	0	0	6184.0	25487.0	0.0	0.0	29696.0	0.0	14938.0	0.0	120.0	33631.0	0.0	1802.0	9424.0	8246.0
c	0	0	0	0	0	0	6351.0	2407.0	0.0	141.0	0.0	26683.0	8287.0	0.0	33511.0	0.0	8115.0	15761.0	8110.0	8721.0
g	0	0	0	0	0	0	10841.0	5470.0	0.0	24697.0	3935.0	1824.0	10406.0	0.0	0.0	0.0	169.0	2452.0	4836.0	3228.0
t	0	0	0	0	0	0	10255.0	267.0	33631.0	8793.0	0.0	5124.0	0.0	33631.0	0.0	0.0	25347.0	13616.0	11261.0	13436.0
MA1136.1_rc_shift7 (FOSB::JUNB(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA1136.1_rc (FOSB::JUNB(var.2)_rc); m=15/44; ncol2=10; w=10; offset=1; strand=R; shift=7; score=0.672812; -------rTGACGTCAy---
; cor=; Ncor=
a	0	0	0	0	0	0	0	664.0	31.0	15.0	836.0	20.0	101.0	28.0	242.0	917.0	12.0	0	0	0
c	0	0	0	0	0	0	0	65.0	30.0	36.0	28.0	893.0	27.0	60.0	700.0	16.0	368.0	0	0	0
g	0	0	0	0	0	0	0	260.0	16.0	776.0	80.0	35.0	842.0	44.0	46.0	36.0	59.0	0	0	0
t	0	0	0	0	0	0	0	11.0	923.0	173.0	56.0	52.0	30.0	869.0	13.0	30.0	561.0	0	0	0
MA0684.2_shift7 (RUNX3) 
; oligos_7nt_mkv4_m18 versus MA0684.2 (RUNX3); m=16/44; ncol2=12; w=11; offset=1; strand=D; shift=7; score=0.667016; -------awAACCTCAawh-
; cor=; Ncor=
a	0	0	0	0	0	0	0	7768.0	9558.0	19136.0	26243.0	427.0	495.0	6357.0	611.0	26121.0	16137.0	8778.0	6879.0	0
c	0	0	0	0	0	0	0	6083.0	5007.0	2662.0	315.0	26293.0	26208.0	419.0	26015.0	414.0	3077.0	5994.0	6900.0	0
g	0	0	0	0	0	0	0	6685.0	3547.0	3500.0	431.0	198.0	385.0	1911.0	390.0	338.0	4696.0	5642.0	6372.0	0
t	0	0	0	0	0	0	0	6841.0	9265.0	2079.0	388.0	459.0	289.0	18690.0	361.0	504.0	3467.0	6963.0	7226.0	0
MA1145.1_shift5 (FOSL2::JUND(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1145.1 (FOSL2::JUND(var.2)); m=17/44; ncol2=15; w=12; offset=-1; strand=D; shift=5; score=0.666287; -----kkrTkACGTCAycgc
; cor=; Ncor=
a	0	0	0	0	0	198.0	219.0	559.0	26.0	7.0	943.0	12.0	135.0	28.0	33.0	972.0	23.0	217.0	162.0	248.0
c	0	0	0	0	0	177.0	189.0	45.0	27.0	46.0	6.0	911.0	15.0	12.0	942.0	6.0	345.0	434.0	222.0	288.0
g	0	0	0	0	0	286.0	340.0	340.0	10.0	678.0	31.0	35.0	823.0	10.0	15.0	11.0	55.0	104.0	416.0	241.0
t	0	0	0	0	0	339.0	252.0	57.0	937.0	268.0	20.0	41.0	28.0	950.0	11.0	11.0	577.0	245.0	200.0	223.0
MA1129.1_rc_shift7 (FOSL1::JUN(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA1129.1_rc (FOSL1::JUN(var.2)_rc); m=18/44; ncol2=10; w=10; offset=1; strand=R; shift=7; score=0.657931; -------rTgACGTcAy---
; cor=; Ncor=
a	0	0	0	0	0	0	0	641.0	30.0	35.0	827.0	24.0	95.0	43.0	240.0	919.0	26.0	0	0	0
c	0	0	0	0	0	0	0	71.0	31.0	58.0	27.0	847.0	38.0	106.0	672.0	24.0	266.0	0	0	0
g	0	0	0	0	0	0	0	264.0	22.0	670.0	105.0	36.0	845.0	26.0	56.0	30.0	69.0	0	0	0
t	0	0	0	0	0	0	0	24.0	917.0	238.0	41.0	93.0	22.0	825.0	33.0	28.0	639.0	0	0	0
MA1150.1_rc_shift7 (RORB_rc) 
; oligos_7nt_mkv4_m18 versus MA1150.1_rc (RORB_rc); m=19/44; ncol2=11; w=11; offset=1; strand=R; shift=7; score=0.653297; -------rTGACCyaawT--
; cor=; Ncor=
a	0	0	0	0	0	0	0	324.0	26.0	155.0	776.0	27.0	52.0	26.0	547.0	403.0	425.0	172.0	0	0
c	0	0	0	0	0	0	0	145.0	63.0	17.0	50.0	928.0	907.0	358.0	235.0	201.0	24.0	29.0	0	0
g	0	0	0	0	0	0	0	326.0	15.0	781.0	146.0	13.0	25.0	14.0	165.0	162.0	26.0	14.0	0	0
t	0	0	0	0	0	0	0	205.0	896.0	47.0	28.0	32.0	16.0	602.0	53.0	233.0	526.0	785.0	0	0
MA0488.1_rc_shift7 (JUN_rc) 
; oligos_7nt_mkv4_m18 versus MA0488.1_rc (JUN_rc); m=20/44; ncol2=13; w=11; offset=1; strand=R; shift=7; score=0.648476; -------ATkACaTCATywt
; cor=; Ncor=
a	0	0	0	0	0	0	0	16045.0	0.0	0.0	16499.0	0.0	13018.0	1.0	119.0	20968.0	0.0	2887.0	5929.0	5141.0
c	0	0	0	0	0	0	0	1016.0	0.0	0.0	0.0	20360.0	4512.0	0.0	20849.0	0.0	3713.0	9682.0	4985.0	4894.0
g	0	0	0	0	0	0	0	3704.0	0.0	14064.0	3531.0	608.0	3438.0	0.0	0.0	0.0	729.0	1903.0	2938.0	2792.0
t	0	0	0	0	0	0	0	203.0	20968.0	6904.0	938.0	0.0	0.0	20967.0	0.0	0.0	16526.0	6496.0	7116.0	8141.0
MA0609.2_shift4 (CREM) 
; oligos_7nt_mkv4_m18 versus MA0609.2 (CREM); m=21/44; ncol2=16; w=12; offset=-2; strand=D; shift=4; score=0.632648; ----gcrgTGACGTCAcygc
; cor=; Ncor=
a	0	0	0	0	3865.0	3966.0	5881.0	2936.0	559.0	434.0	15694.0	517.0	1582.0	400.0	672.0	15228.0	789.0	3757.0	3582.0	3801.0
c	0	0	0	0	4230.0	5521.0	2908.0	2159.0	730.0	1038.0	313.0	14031.0	901.0	622.0	14883.0	508.0	11146.0	4473.0	3957.0	5132.0
g	0	0	0	0	5132.0	3956.0	4474.0	11144.0	506.0	14883.0	619.0	897.0	14026.0	314.0	1039.0	730.0	2156.0	2910.0	5523.0	4230.0
t	0	0	0	0	3800.0	3584.0	3764.0	788.0	15232.0	672.0	401.0	1582.0	518.0	15691.0	433.0	561.0	2936.0	5887.0	3965.0	3864.0
MA1126.1_shift6 (FOS::JUN(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1126.1 (FOS::JUN(var.2)); m=22/44; ncol2=16; w=12; offset=0; strand=D; shift=6; score= 0.6213; ------drTgACGTCAtmmk
; cor=; Ncor=
a	0	0	0	0	0	0	266.0	556.0	47.0	42.0	748.0	80.0	131.0	40.0	53.0	907.0	30.0	299.0	322.0	190.0
c	0	0	0	0	0	0	63.0	45.0	74.0	112.0	31.0	838.0	114.0	23.0	846.0	24.0	234.0	322.0	313.0	178.0
g	0	0	0	0	0	0	419.0	369.0	62.0	655.0	135.0	41.0	722.0	32.0	44.0	36.0	60.0	160.0	161.0	261.0
t	0	0	0	0	0	0	252.0	30.0	816.0	191.0	86.0	41.0	34.0	905.0	57.0	33.0	676.0	220.0	204.0	371.0
MA1143.1_shift7 (FOSL1::JUND(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1143.1 (FOSL1::JUND(var.2)); m=23/44; ncol2=10; w=10; offset=1; strand=D; shift=7; score=0.61881; -------rTGACgymay---
; cor=; Ncor=
a	0	0	0	0	0	0	0	561.0	36.0	39.0	870.0	32.0	116.0	117.0	546.0	645.0	123.0	0	0	0
c	0	0	0	0	0	0	0	75.0	50.0	101.0	45.0	835.0	59.0	262.0	330.0	66.0	401.0	0	0	0
g	0	0	0	0	0	0	0	324.0	44.0	777.0	41.0	64.0	649.0	39.0	83.0	100.0	82.0	0	0	0
t	0	0	0	0	0	0	0	40.0	870.0	82.0	44.0	68.0	176.0	582.0	41.0	188.0	394.0	0	0	0
MA0017.2_rc_shift4 (NR2F1_rc) 
; oligos_7nt_mkv4_m18 versus MA0017.2_rc (NR2F1_rc); m=24/44; ncol2=13; w=11; offset=-2; strand=R; shift=4; score=0.616008; ----CyykTGACCYytg---
; cor=; Ncor=
a	0	0	0	0	3466.0	2427.0	1469.0	2270.0	0.0	0.0	12059.0	0.0	0.0	0.0	469.0	1948.0	3980.0	0	0	0
c	0	0	0	0	36863.0	3886.0	4395.0	1618.0	91.0	0.0	0.0	12059.0	12059.0	3791.0	4869.0	1153.0	3276.0	0	0	0
g	0	0	0	0	2912.0	2470.0	2966.0	3055.0	0.0	12059.0	0.0	0.0	30.0	0.0	387.0	1692.0	11446.0	0	0	0
t	0	0	0	0	5681.0	3276.0	3229.0	5116.0	12059.0	0.0	0.0	0.0	0.0	8496.0	6333.0	7266.0	4802.0	0	0	0
MA1535.1_rc_shift7 (NR2C1_rc) 
; oligos_7nt_mkv4_m18 versus MA1535.1_rc (NR2C1_rc); m=25/44; ncol2=9; w=9; offset=1; strand=R; shift=7; score=0.615301; -------rTGACCyyk----
; cor=; Ncor=
a	0	0	0	0	0	0	0	2499.0	0.0	0.0	9622.0	0.0	297.0	55.0	1316.0	2225.0	0	0	0	0
c	0	0	0	0	0	0	0	2039.0	1716.0	321.0	271.0	9622.0	9622.0	4756.0	5587.0	1997.0	0	0	0	0
g	0	0	0	0	0	0	0	2786.0	0.0	9622.0	0.0	0.0	0.0	227.0	1225.0	2848.0	0	0	0	0
t	0	0	0	0	0	0	0	2298.0	9622.0	0.0	0.0	0.0	0.0	4866.0	4035.0	2552.0	0	0	0	0
MA0071.1_rc_shift8 (RORA_rc) 
; oligos_7nt_mkv4_m18 versus MA0071.1_rc (RORA_rc); m=26/44; ncol2=10; w=10; offset=2; strand=R; shift=8; score=0.60882; --------TGACCTwgww--
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0.0	0.0	25.0	0.0	0.0	0.0	7.0	3.0	15.0	7.0	0	0
c	0	0	0	0	0	0	0	0	0.0	0.0	0.0	25.0	25.0	4.0	5.0	4.0	0.0	2.0	0	0
g	0	0	0	0	0	0	0	0	0.0	25.0	0.0	0.0	0.0	0.0	2.0	12.0	1.0	1.0	0	0
t	0	0	0	0	0	0	0	0	25.0	0.0	0.0	0.0	0.0	21.0	11.0	6.0	9.0	15.0	0	0
MA1536.1_rc_shift7 (NR2C2(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA1536.1_rc (NR2C2(var.2)_rc); m=27/44; ncol2=8; w=8; offset=1; strand=R; shift=7; score=0.568717; -------dYGACCyy-----
; cor=; Ncor=
a	0	0	0	0	0	0	0	5122.0	0.0	4406.0	18628.0	4790.0	1341.0	0.0	2861.0	0	0	0	0	0
c	0	0	0	0	0	0	0	3684.0	6639.0	1643.0	1588.0	18628.0	18628.0	8395.0	6420.0	0	0	0	0	0
g	0	0	0	0	0	0	0	4757.0	0.0	18628.0	0.0	0.0	236.0	719.0	3111.0	0	0	0	0	0
t	0	0	0	0	0	0	0	5065.0	18628.0	0.0	0.0	0.0	0.0	10232.0	6236.0	0	0	0	0	0
MA0160.1_rc_shift7 (NR4A2_rc) 
; oligos_7nt_mkv4_m18 versus MA0160.1_rc (NR4A2_rc); m=28/44; ncol2=8; w=8; offset=1; strand=R; shift=7; score=0.558162; -------gTGACCTt-----
; cor=; Ncor=
a	0	0	0	0	0	0	0	0.0	0.0	1.0	10.0	0.0	1.0	0.0	1.0	0	0	0	0	0
c	0	0	0	0	0	0	0	2.0	0.0	0.0	0.0	11.0	13.0	1.0	3.0	0	0	0	0	0
g	0	0	0	0	0	0	0	8.0	0.0	13.0	2.0	0.0	0.0	0.0	1.0	0	0	0	0	0
t	0	0	0	0	0	0	0	3.0	14.0	0.0	2.0	3.0	0.0	13.0	8.0	0	0	0	0	0
MA1576.1_shift7 (THRB(var.3)) 
; oligos_7nt_mkv4_m18 versus MA1576.1 (THRB(var.3)); m=29/44; ncol2=19; w=11; offset=1; strand=D; shift=7; score=0.474811; -------rTGACCTyacrTG
; cor=; Ncor=
a	0	0	0	0	0	0	0	119.0	0.0	28.0	389.0	0.0	0.0	13.0	11.0	263.0	42.0	102.0	0.0	0.0
c	0	0	0	0	0	0	0	31.0	8.0	89.0	19.0	389.0	389.0	75.0	134.0	28.0	221.0	86.0	0.0	0.0
g	0	0	0	0	0	0	0	157.0	0.0	389.0	17.0	4.0	59.0	38.0	93.0	89.0	71.0	205.0	6.0	389.0
t	0	0	0	0	0	0	0	82.0	381.0	45.0	71.0	17.0	20.0	389.0	151.0	9.0	54.0	0.0	393.0	3.0
MA1110.1_shift4 (NR1H4) 
; oligos_7nt_mkv4_m18 versus MA1110.1 (NR1H4); m=30/44; ncol2=11; w=9; offset=-2; strand=D; shift=4; score=0.469838; ----tcAATGACCyh-----
; cor=; Ncor=
a	0	0	0	0	76.0	68.0	461.0	413.0	3.0	24.0	455.0	26.0	12.0	72.0	135.0	0	0	0	0	0
c	0	0	0	0	83.0	240.0	10.0	28.0	15.0	7.0	22.0	468.0	476.0	135.0	131.0	0	0	0	0	0
g	0	0	0	0	117.0	87.0	12.0	36.0	6.0	462.0	14.0	0.0	6.0	81.0	105.0	0	0	0	0	0
t	0	0	0	0	229.0	110.0	22.0	28.0	481.0	12.0	14.0	11.0	11.0	217.0	134.0	0	0	0	0	0
MA1575.1_shift7 (THRB(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1575.1 (THRB(var.2)); m=31/44; ncol2=19; w=11; offset=1; strand=D; shift=7; score=0.464949; -------gTGwCCTyrhyrA
; cor=; Ncor=
a	0	0	0	0	0	0	0	1010.0	26.0	252.0	4111.0	29.0	1.0	0.0	286.0	2454.0	1060.0	63.0	1469.0	4111.0
c	0	0	0	0	0	0	0	624.0	618.0	642.0	351.0	4111.0	4111.0	1178.0	1512.0	241.0	1033.0	1266.0	904.0	106.0
g	0	0	0	0	0	0	0	1640.0	15.0	4111.0	432.0	2.0	2.0	77.0	872.0	1353.0	939.0	312.0	1488.0	1233.0
t	0	0	0	0	0	0	0	837.0	4111.0	230.0	1787.0	0.0	8.0	4111.0	1441.0	63.0	1079.0	2470.0	251.0	2.0
MA1470.1_rc_shift2 (BACH2(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA1470.1_rc (BACH2(var.2)_rc); m=32/44; ncol2=20; w=12; offset=-4; strand=R; shift=2; score=0.441708; --aWAksATSACGTCATsvT
; cor=; Ncor=
a	0	0	166.0	224.0	236.0	54.0	31.0	259.0	0.0	0.0	323.0	0.0	0.0	0.0	0.0	317.0	3.0	0.0	93.0	46.0
c	0	0	46.0	3.0	1.0	68.0	189.0	0.0	0.0	116.0	0.0	327.0	0.0	1.0	326.0	0.0	0.0	114.0	93.0	27.0
g	0	0	33.0	9.0	25.0	94.0	100.0	63.0	15.0	320.0	0.0	0.0	324.0	0.0	0.0	0.0	0.0	196.0	85.0	11.0
t	0	0	76.0	79.0	65.0	106.0	2.0	0.0	322.0	0.0	0.0	0.0	0.0	323.0	96.0	4.0	324.0	15.0	50.0	250.0
MA1556.1_rc_shift1 (RXRG(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA1556.1_rc (RXRG(var.2)_rc); m=33/44; ncol2=14; w=9; offset=-5; strand=R; shift=1; score=0.436414; -rrGGTCrTGACCyy-----
; cor=; Ncor=
a	0	761.0	1235.0	37.0	64.0	119.0	26.0	1279.0	0.0	16.0	2117.0	99.0	0.0	0.0	79.0	0	0	0	0	0
c	0	226.0	57.0	176.0	63.0	78.0	2117.0	0.0	0.0	1.0	33.0	2117.0	2117.0	853.0	1071.0	0	0	0	0	0
g	0	996.0	882.0	2117.0	2117.0	214.0	55.0	838.0	15.0	2117.0	5.0	31.0	107.0	7.0	164.0	0	0	0	0	0
t	0	135.0	23.0	144.0	144.0	2117.0	64.0	0.0	2117.0	0.0	12.0	7.0	0.0	1264.0	803.0	0	0	0	0	0
MA1538.1_shift0 (NR2F1(var.3)) 
; oligos_7nt_mkv4_m18 versus MA1538.1 (NR2F1(var.3)); m=34/44; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.428406; rrGGTCRtTGACCYy-----
; cor=; Ncor=
a	1651.0	2466.0	44.0	75.0	22.0	20.0	2473.0	813.0	0.0	81.0	3515.0	0.0	131.0	57.0	308.0	0	0	0	0	0
c	280.0	75.0	121.0	45.0	87.0	3515.0	58.0	855.0	89.0	15.0	95.0	3515.0	3515.0	949.0	1177.0	0	0	0	0	0
g	1271.0	1049.0	3515.0	3515.0	232.0	58.0	1041.0	858.0	52.0	3515.0	0.0	1.0	75.0	32.0	205.0	0	0	0	0	0
t	312.0	79.0	356.0	67.0	3515.0	171.0	4.0	990.0	3515.0	12.0	0.0	45.0	50.0	2566.0	1825.0	0	0	0	0	0
MA0014.3_shift3 (PAX5) 
; oligos_7nt_mkv4_m18 versus MA0014.3 (PAX5); m=35/44; ncol2=12; w=9; offset=-3; strand=D; shift=3; score=0.425217; ---rrGCGTGACCmb-----
; cor=; Ncor=
a	0	0	0	540.0	625.0	18.0	18.0	111.0	94.0	16.0	1243.0	32.0	69.0	377.0	263.0	0	0	0	0	0
c	0	0	0	179.0	148.0	151.0	1276.0	35.0	88.0	37.0	39.0	1305.0	1081.0	405.0	403.0	0	0	0	0	0
g	0	0	0	578.0	354.0	1231.0	34.0	1243.0	30.0	1355.0	70.0	57.0	118.0	312.0	359.0	0	0	0	0	0
t	0	0	0	115.0	285.0	12.0	84.0	23.0	1200.0	4.0	60.0	18.0	144.0	318.0	387.0	0	0	0	0	0
MA1539.1_shift0 (NR2F6(var.3)) 
; oligos_7nt_mkv4_m18 versus MA1539.1 (NR2F6(var.3)); m=36/44; ncol2=15; w=9; offset=-6; strand=D; shift=0; score=0.422835; rAGGTCAbTGACCTy-----
; cor=; Ncor=
a	6349.0	8959.0	31.0	38.0	26.0	4.0	9114.0	2492.0	66.0	387.0	11749.0	159.0	82.0	23.0	910.0	0	0	0	0	0
c	727.0	26.0	1.0	12.0	78.0	11749.0	39.0	3333.0	333.0	206.0	255.0	11749.0	11749.0	2844.0	3745.0	0	0	0	0	0
g	3736.0	2789.0	11749.0	11749.0	253.0	216.0	2634.0	2972.0	67.0	11749.0	107.0	0.0	9.0	26.0	718.0	0	0	0	0	0
t	937.0	20.0	124.0	145.0	11749.0	443.0	46.0	2952.0	11749.0	9.0	3.0	36.0	24.0	8905.0	6376.0	0	0	0	0	0
MA1555.1_shift1 (RXRB(var.2)) 
; oligos_7nt_mkv4_m18 versus MA1555.1 (RXRB(var.2)); m=37/44; ncol2=14; w=9; offset=-5; strand=D; shift=1; score=0.420518; -rrGGTCrTGACCyy-----
; cor=; Ncor=
a	0	614.0	934.0	59.0	27.0	35.0	23.0	1207.0	11.0	92.0	1803.0	309.0	58.0	18.0	124.0	0	0	0	0	0
c	0	190.0	59.0	29.0	39.0	85.0	1803.0	15.0	59.0	35.0	53.0	1803.0	1803.0	866.0	868.0	0	0	0	0	0
g	0	851.0	870.0	1803.0	1803.0	157.0	41.0	596.0	0.0	1803.0	41.0	11.0	32.0	14.0	194.0	0	0	0	0	0
t	0	148.0	15.0	103.0	270.0	1803.0	123.0	7.0	1803.0	8.0	14.0	23.0	58.0	937.0	617.0	0	0	0	0	0
MA0067.1_rc_shift5 (Pax2_rc) 
; oligos_7nt_mkv4_m18 versus MA0067.1_rc (Pax2_rc); m=38/44; ncol2=8; w=7; offset=-1; strand=R; shift=5; score=0.419867; -----vmrTGAcw-------
; cor=; Ncor=
a	0	0	0	0	0	8.0	10.0	11.0	1.0	2.0	26.0	2.0	9.0	0	0	0	0	0	0	0
c	0	0	0	0	0	11.0	19.0	1.0	3.0	1.0	0.0	21.0	5.0	0	0	0	0	0	0	0
g	0	0	0	0	0	11.0	0.0	17.0	1.0	28.0	2.0	1.0	7.0	0	0	0	0	0	0	0
t	0	0	0	0	0	1.0	2.0	2.0	26.0	0.0	3.0	7.0	10.0	0	0	0	0	0	0	0
MA0858.1_rc_shift8 (Rarb(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA0858.1_rc (Rarb(var.2)_rc); m=39/44; ncol2=17; w=10; offset=2; strand=R; shift=8; score=0.419146; --------TGACCTytrkdT
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	1.0	4.0	674.0	26.0	0.0	1.0	4.0	158.0	281.0	64.0	204.0	0.0
c	0	0	0	0	0	0	0	0	2.0	0.0	4.0	663.0	682.0	37.0	218.0	41.0	116.0	140.0	15.0	4.0
g	0	0	0	0	0	0	0	0	0.0	765.0	3.0	2.0	1.0	0.0	4.0	34.0	239.0	252.0	210.0	0.0
t	0	0	0	0	0	0	0	0	693.0	0.0	0.0	0.0	1.0	639.0	398.0	438.0	38.0	249.0	293.0	728.0
MA0728.1_rc_shift0 (Nr2f6(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA0728.1_rc (Nr2f6(var.2)_rc); m=40/44; ncol2=15; w=9; offset=-6; strand=R; shift=0; score=0.414308; TGACCTyTTGACCTy-----
; cor=; Ncor=
a	0.0	3.0	369.0	5.0	0.0	0.0	59.0	9.0	1.0	51.0	378.0	0.0	0.0	3.0	0.0	0	0	0	0	0
c	9.0	0.0	0.0	155.0	324.0	0.0	94.0	7.0	0.0	1.0	1.0	183.0	210.0	53.0	172.0	0	0	0	0	0
g	0.0	678.0	0.0	0.0	0.0	0.0	0.0	4.0	30.0	667.0	0.0	0.0	0.0	0.0	16.0	0	0	0	0	0
t	446.0	0.0	2.0	0.0	0.0	258.0	165.0	406.0	494.0	0.0	0.0	1.0	0.0	265.0	100.0	0	0	0	0	0
MA1552.1_shift1 (RARB(var.3)) 
; oligos_7nt_mkv4_m18 versus MA1552.1 (RARB(var.3)); m=41/44; ncol2=14; w=9; offset=-5; strand=D; shift=1; score=0.413585; -rAGGTCrTGACCTy-----
; cor=; Ncor=
a	0	217.0	361.0	3.0	10.0	21.0	5.0	322.0	3.0	16.0	472.0	76.0	12.0	10.0	63.0	0	0	0	0	0
c	0	30.0	45.0	17.0	4.0	64.0	472.0	0.0	5.0	8.0	26.0	472.0	472.0	101.0	128.0	0	0	0	0	0
g	0	169.0	111.0	472.0	472.0	52.0	7.0	150.0	0.0	472.0	18.0	0.0	8.0	45.0	55.0	0	0	0	0	0
t	0	56.0	0.0	31.0	76.0	472.0	16.0	3.0	472.0	4.0	13.0	7.0	16.0	371.0	226.0	0	0	0	0	0
MA1553.1_shift1 (RARG(var.3)) 
; oligos_7nt_mkv4_m18 versus MA1553.1 (RARG(var.3)); m=42/44; ncol2=14; w=9; offset=-5; strand=D; shift=1; score=0.407322; -rAGGTCATGACCTy-----
; cor=; Ncor=
a	0	1689.0	2761.0	111.0	39.0	344.0	28.0	2607.0	33.0	91.0	3442.0	997.0	106.0	54.0	427.0	0	0	0	0	0
c	0	296.0	332.0	37.0	28.0	293.0	3442.0	9.0	50.0	46.0	196.0	3442.0	3442.0	687.0	998.0	0	0	0	0	0
g	0	978.0	681.0	3442.0	3442.0	323.0	58.0	835.0	13.0	3442.0	128.0	5.0	18.0	275.0	282.0	0	0	0	0	0
t	0	479.0	108.0	156.0	1109.0	3442.0	150.0	22.0	3442.0	12.0	200.0	12.0	48.0	2756.0	1736.0	0	0	0	0	0
MA0159.1_rc_shift8 (RARA::RXRA_rc) 
; oligos_7nt_mkv4_m18 versus MA0159.1_rc (RARA::RXRA_rc); m=43/44; ncol2=17; w=10; offset=2; strand=R; shift=8; score=0.407288; --------TGAMCTsycsrT
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	1.0	2.0	17.0	6.0	1.0	0.0	0.0	2.0	3.0	1.0	7.0	0.0
c	0	0	0	0	0	0	0	0	1.0	3.0	3.0	16.0	20.0	3.0	12.0	7.0	11.0	9.0	5.0	1.0
g	0	0	0	0	0	0	0	0	0.0	17.0	1.0	1.0	1.0	3.0	6.0	1.0	4.0	8.0	7.0	0.0
t	0	0	0	0	0	0	0	0	21.0	1.0	2.0	0.0	1.0	17.0	5.0	13.0	5.0	5.0	4.0	22.0
MA0860.1_rc_shift8 (Rarg(var.2)_rc) 
; oligos_7nt_mkv4_m18 versus MA0860.1_rc (Rarg(var.2)_rc); m=44/44; ncol2=17; w=10; offset=2; strand=R; shift=8; score=0.406976; --------TGACCTyTskTG
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	0.0	22.0	4540.0	319.0	1.0	2.0	57.0	479.0	595.0	780.0	0.0	0.0
c	0	0	0	0	0	0	0	0	6.0	2.0	0.0	5040.0	5891.0	838.0	2133.0	558.0	2442.0	386.0	12.0	0.0
g	0	0	0	0	0	0	0	0	5.0	5340.0	2.0	8.0	0.0	32.0	58.0	482.0	1778.0	2677.0	3.0	6256.0
t	0	0	0	0	0	0	0	0	4764.0	7.0	14.0	0.0	0.0	3603.0	2745.0	3248.0	314.0	1394.0	4044.0	2.0