One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_7nt_mkv4_m41/peak-motifs_oligos_7nt_mkv4_m41.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_7nt_mkv4_m41/peak-motifs_oligos_7nt_mkv4_m41_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m41_shift1 ; 22 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m41_shift1 (oligos_7nt_mkv4_m41oligos_7nt_mkv4_m41)
; oligos_7nt_mkv4_m41 (oligos_7nt_mkv4_m41oligos_7nt_mkv4_m41); m=0 (reference); ncol1=11; shift=1; ncol=15; -scCACCAGCtg--- ; Alignment reference a 0 80 84 0 379 0 0 374 0 0 87 35 0 0 0 c 0 107 124 380 0 380 376 3 0 380 72 65 0 0 0 g 0 131 88 0 1 0 4 3 379 0 23 240 0 0 0 t 0 62 84 0 0 0 0 0 1 0 198 40 0 0 0

MA1648.1_shift1 (TCF12(var.2))
; oligos_7nt_mkv4_m41 versus MA1648.1 (TCF12(var.2)); m=1/21; ncol2=11; w=11; offset=0; strand=D; shift=1; score=0.796375; -ssCACCTGCys--- ; cor=; Ncor= a 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 0 0 c 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 0 0 g 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 0 0 t 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0 0 0

MA0522.3_shift1 (TCF3)
; oligos_7nt_mkv4_m41 versus MA0522.3 (TCF3); m=2/21; ncol2=11; w=11; offset=0; strand=D; shift=1; score=0.791435; -svCACCTGCss--- ; cor=; Ncor= a 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 0 0 c 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 0 0 g 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 0 0 t 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0 0 0

MA0103.3_shift1 (ZEB1)
; oligos_7nt_mkv4_m41 versus MA0103.3 (ZEB1); m=3/21; ncol2=11; w=11; offset=0; strand=D; shift=1; score=0.73276; -ssCACCTGsss--- ; cor=; Ncor= a 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 0 0 c 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 0 0 g 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 0 0 t 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0 0 0

MA1558.1_rc_shift1 (SNAI1_rc)
; oligos_7nt_mkv4_m41 versus MA1558.1_rc (SNAI1_rc); m=4/21; ncol2=10; w=10; offset=0; strand=R; shift=1; score=0.684234; -yrCACCTGyh---- ; cor=; Ncor= a 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 0 0 c 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 0 0 g 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 0 0 t 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0 0 0

MA1631.1_shift0 (ASCL1(var.2))
; oligos_7nt_mkv4_m41 versus MA1631.1 (ASCL1(var.2)); m=5/21; ncol2=13; w=11; offset=-1; strand=D; shift=0; score=0.64455; cdgCACCTGCysc-- ; cor=; Ncor= a 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 0 0 c 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 0 0 g 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 0 0 t 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0 0 0

MA0830.2_shift0 (TCF4)
; oligos_7nt_mkv4_m41 versus MA0830.2 (TCF4); m=6/21; ncol2=13; w=11; offset=-1; strand=D; shift=0; score=0.627902; cggCACCTGccss-- ; cor=; Ncor= a 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 0 0 c 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 0 0 g 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 0 0 t 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0 0 0

MA0091.1_shift2 (TAL1::TCF3)
; oligos_7nt_mkv4_m41 versus MA0091.1 (TAL1::TCF3); m=7/21; ncol2=12; w=10; offset=1; strand=D; shift=2; score=0.539627; --mgAmCAKMTGkT- ; cor=; Ncor= a 0 0 13.0 9.0 39.0 20.0 0.0 44.0 0.0 12.0 0.0 0.0 0.0 4.0 0 c 0 0 14.0 10.0 0.0 24.0 43.0 0.0 1.0 32.0 0.0 0.0 3.0 4.0 0 g 0 0 8.0 20.0 3.0 0.0 1.0 0.0 11.0 0.0 0.0 43.0 20.0 2.0 0 t 0 0 9.0 5.0 2.0 0.0 0.0 0.0 32.0 0.0 44.0 1.0 21.0 34.0 0

MA0521.1_rc_shift3 (Tcf12_rc)
; oligos_7nt_mkv4_m41 versus MA0521.1_rc (Tcf12_rc); m=8/21; ncol2=11; w=9; offset=2; strand=R; shift=3; score=0.520947; ---cwsCAGCTGYy- ; cor=; Ncor= a 0 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 c 0 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 g 0 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 t 0 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0

MA0832.1_rc_shift2 (Tcf21_rc)
; oligos_7nt_mkv4_m41 versus MA0832.1_rc (Tcf21_rc); m=9/21; ncol2=14; w=10; offset=1; strand=R; shift=2; score=0.513294; --ryAACAGCTGTTr ; cor=; Ncor= a 0 0 60.0 19.0 171.0 171.0 0.0 171.0 1.0 2.0 0.0 0.0 0.0 3.0 46.0 c 0 0 32.0 80.0 0.0 20.0 171.0 0.0 1.0 171.0 0.0 0.0 0.0 23.0 22.0 g 0 0 49.0 23.0 23.0 4.0 0.0 0.0 171.0 0.0 1.0 171.0 10.0 1.0 76.0 t 0 0 30.0 50.0 5.0 0.0 0.0 0.0 0.0 0.0 171.0 0.0 171.0 171.0 28.0

MA0691.1_shift4 (TFAP4)
; oligos_7nt_mkv4_m41 versus MA0691.1 (TFAP4); m=10/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.506087; ----AwCAGCTGwT- ; cor=; Ncor= a 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 c 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 g 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 t 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0

MA1485.1_shift2 (FERD3L)
; oligos_7nt_mkv4_m41 versus MA1485.1 (FERD3L); m=11/21; ncol2=14; w=10; offset=1; strand=D; shift=2; score=0.502595; --GyrmCAGCTGTyA ; cor=; Ncor= a 0 0 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 c 0 0 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 g 0 0 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 t 0 0 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0

MA0816.1_shift4 (Ascl2)
; oligos_7nt_mkv4_m41 versus MA0816.1 (Ascl2); m=12/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.493682; ----arCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 c 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 g 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 t 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0

MA0665.1_shift4 (MSC)
; oligos_7nt_mkv4_m41 versus MA0665.1 (MSC); m=13/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.483599; ----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 69.0 69.0 0.0 69.0 0.0 0.0 0.0 0.0 3.0 0.0 0 c 0 0 0 0 0.0 12.0 69.0 0.0 12.0 69.0 0.0 0.0 10.0 9.0 0 g 0 0 0 0 18.0 3.0 3.0 0.0 69.0 3.0 0.0 69.0 4.0 4.0 0 t 0 0 0 0 7.0 0.0 1.0 0.0 0.0 0.0 69.0 4.0 69.0 69.0 0

MA1472.1_shift4 (BHLHA15(var.2))
; oligos_7nt_mkv4_m41 versus MA1472.1 (BHLHA15(var.2)); m=14/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.481772; ----avCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 c 0 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 g 0 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 t 0 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0

MA1467.1_shift4 (ATOH1(var.2))
; oligos_7nt_mkv4_m41 versus MA1467.1 (ATOH1(var.2)); m=15/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.480454; ----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0

MA1635.1_shift4 (BHLHE22(var.2))
; oligos_7nt_mkv4_m41 versus MA1635.1 (BHLHE22(var.2)); m=16/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.478156; ----csCAGCTGsg- ; cor=; Ncor= a 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 c 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 g 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 t 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0

MA0500.2_shift3 (MYOG)
; oligos_7nt_mkv4_m41 versus MA0500.2 (MYOG); m=17/21; ncol2=12; w=9; offset=2; strand=D; shift=3; score=0.465933; ---sarCAGCTGyts ; cor=; Ncor= a 0 0 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 c 0 0 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 g 0 0 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 t 0 0 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0

MA0667.1_shift4 (MYF6)
; oligos_7nt_mkv4_m41 versus MA0667.1 (MYF6); m=18/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.438469; ----AACArCTGTY- ; cor=; Ncor= a 0 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 c 0 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 g 0 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 t 0 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0

MA0820.1_shift4 (FIGLA)
; oligos_7nt_mkv4_m41 versus MA0820.1 (FIGLA); m=19/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.435887; ----wmCACCTGkw- ; cor=; Ncor= a 0 0 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 c 0 0 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 g 0 0 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 t 0 0 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0

MA0807.1_rc_shift0 (TBX5_rc)
; oligos_7nt_mkv4_m41 versus MA0807.1_rc (TBX5_rc); m=20/21; ncol2=8; w=7; offset=-1; strand=R; shift=0; score=0.417034; TmACACCT------- ; cor=; Ncor= a 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 0 0 c 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 0 0 g 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 0 0 t 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0 0 0

MA1628.1_shift4 (Zic1::Zic2)
; oligos_7nt_mkv4_m41 versus MA1628.1 (Zic1::Zic2); m=21/21; ncol2=11; w=8; offset=3; strand=D; shift=4; score=0.406579; ----cvCAGCAGGsr ; cor=; Ncor= a 0 0 0 0 2072.0 3057.0 29.0 9238.0 96.0 75.0 8950.0 11.0 46.0 2429.0 2524.0 c 0 0 0 0 4620.0 2589.0 9594.0 384.0 195.0 9293.0 311.0 512.0 91.0 2516.0 2154.0 g 0 0 0 0 2206.0 2773.0 106.0 266.0 9527.0 96.0 627.0 9279.0 9631.0 2775.0 3506.0 t 0 0 0 0 994.0 1473.0 163.0 4.0 74.0 428.0 4.0 90.0 124.0 2172.0 1708.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv4_m41_shift1 (oligos_7nt_mkv4_m41oligos_7nt_mkv4_m41)				; oligos_7nt_mkv4_m41 (oligos_7nt_mkv4_m41oligos_7nt_mkv4_m41); m=0 (reference); ncol1=11; shift=1; ncol=15; -scCACCAGCtg--- ; Alignment reference a 0 80 84 0 379 0 0 374 0 0 87 35 0 0 0 c 0 107 124 380 0 380 376 3 0 380 72 65 0 0 0 g 0 131 88 0 1 0 4 3 379 0 23 240 0 0 0 t 0 62 84 0 0 0 0 0 1 0 198 40 0 0 0
MA1648.1_shift1 (TCF12(var.2))				; oligos_7nt_mkv4_m41 versus MA1648.1 (TCF12(var.2)); m=1/21; ncol2=11; w=11; offset=0; strand=D; shift=1; score=0.796375; -ssCACCTGCys--- ; cor=; Ncor= a 0 13014.0 14835.0 955.0 52529.0 744.0 1913.0 1380.0 2819.0 1089.0 13867.0 11414.0 0 0 0 c 0 19393.0 17594.0 57848.0 2007.0 55598.0 55765.0 3886.0 2088.0 55061.0 17603.0 18154.0 0 0 0 g 0 16996.0 18560.0 1186.0 5607.0 3780.0 3536.0 2625.0 55922.0 2314.0 14293.0 20060.0 0 0 0 t 0 12473.0 10887.0 1887.0 1733.0 1754.0 662.0 53985.0 1047.0 3412.0 16113.0 12248.0 0 0 0
MA0522.3_shift1 (TCF3)				; oligos_7nt_mkv4_m41 versus MA0522.3 (TCF3); m=2/21; ncol2=11; w=11; offset=0; strand=D; shift=1; score=0.791435; -svCACCTGCss--- ; cor=; Ncor= a 0 6270.0 8032.0 469.0 28916.0 309.0 1127.0 380.0 1089.0 295.0 7276.0 5485.0 0 0 0 c 0 10212.0 9269.0 29379.0 396.0 28640.0 27199.0 2003.0 1038.0 28742.0 8727.0 10122.0 0 0 0 g 0 8539.0 9432.0 708.0 1574.0 1362.0 2652.0 1339.0 28642.0 987.0 8025.0 9222.0 0 0 0 t 0 6240.0 4528.0 705.0 375.0 950.0 283.0 27539.0 492.0 1237.0 7233.0 6432.0 0 0 0
MA0103.3_shift1 (ZEB1)				; oligos_7nt_mkv4_m41 versus MA0103.3 (ZEB1); m=3/21; ncol2=11; w=11; offset=0; strand=D; shift=1; score=0.73276; -ssCACCTGsss--- ; cor=; Ncor= a 0 3211.0 4685.0 114.0 19905.0 32.0 193.0 4.0 441.0 1982.0 4258.0 3490.0 0 0 0 c 0 7998.0 5550.0 19195.0 0.0 19878.0 19257.0 501.0 178.0 9561.0 6117.0 6955.0 0 0 0 g 0 5228.0 5179.0 158.0 223.0 97.0 649.0 355.0 19381.0 5178.0 6601.0 5828.0 0 0 0 t 0 3692.0 4715.0 662.0 1.0 122.0 30.0 19269.0 129.0 3408.0 3153.0 3856.0 0 0 0
MA1558.1_rc_shift1 (SNAI1_rc)				; oligos_7nt_mkv4_m41 versus MA1558.1_rc (SNAI1_rc); m=4/21; ncol2=10; w=10; offset=0; strand=R; shift=1; score=0.684234; -yrCACCTGyh---- ; cor=; Ncor= a 0 6356.0 9044.0 311.0 19982.0 28.0 306.0 568.0 340.0 3518.0 5112.0 0 0 0 0 c 0 9894.0 5306.0 19982.0 42.0 19982.0 19982.0 91.0 275.0 12989.0 6410.0 0 0 0 0 g 0 4592.0 10938.0 0.0 0.0 5.0 517.0 297.0 19982.0 501.0 3187.0 0 0 0 0 t 0 10088.0 1639.0 706.0 38.0 72.0 1766.0 19982.0 446.0 6993.0 5274.0 0 0 0 0
MA1631.1_shift0 (ASCL1(var.2))				; oligos_7nt_mkv4_m41 versus MA1631.1 (ASCL1(var.2)); m=5/21; ncol2=13; w=11; offset=-1; strand=D; shift=0; score=0.64455; cdgCACCTGCysc-- ; cor=; Ncor= a 6833.0 8952.0 5836.0 184.0 32315.0 163.0 196.0 368.0 251.0 399.0 4490.0 7083.0 5972.0 0 0 c 11805.0 7998.0 6654.0 33562.0 563.0 30169.0 33402.0 740.0 445.0 28844.0 17883.0 10555.0 11996.0 0 0 g 8371.0 8601.0 18576.0 321.0 860.0 3209.0 607.0 492.0 33411.0 2719.0 2966.0 8939.0 8356.0 0 0 t 7347.0 8805.0 3290.0 289.0 618.0 815.0 151.0 32756.0 249.0 2394.0 9017.0 7779.0 8032.0 0 0
MA0830.2_shift0 (TCF4)				; oligos_7nt_mkv4_m41 versus MA0830.2 (TCF4); m=6/21; ncol2=13; w=11; offset=-1; strand=D; shift=0; score=0.627902; cggCACCTGccss-- ; cor=; Ncor= a 6048.0 7034.0 4168.0 243.0 27023.0 216.0 356.0 372.0 251.0 1694.0 5534.0 6413.0 5133.0 0 0 c 10052.0 6754.0 5062.0 28686.0 635.0 26765.0 27724.0 1016.0 540.0 18935.0 12872.0 8658.0 9843.0 0 0 g 7140.0 8618.0 18498.0 321.0 1295.0 1733.0 1197.0 679.0 28432.0 5281.0 4933.0 7964.0 7662.0 0 0 t 6225.0 7059.0 1737.0 215.0 512.0 751.0 188.0 27398.0 242.0 3555.0 6126.0 6430.0 6827.0 0 0
MA0091.1_shift2 (TAL1::TCF3)				; oligos_7nt_mkv4_m41 versus MA0091.1 (TAL1::TCF3); m=7/21; ncol2=12; w=10; offset=1; strand=D; shift=2; score=0.539627; --mgAmCAKMTGkT- ; cor=; Ncor= a 0 0 13.0 9.0 39.0 20.0 0.0 44.0 0.0 12.0 0.0 0.0 0.0 4.0 0 c 0 0 14.0 10.0 0.0 24.0 43.0 0.0 1.0 32.0 0.0 0.0 3.0 4.0 0 g 0 0 8.0 20.0 3.0 0.0 1.0 0.0 11.0 0.0 0.0 43.0 20.0 2.0 0 t 0 0 9.0 5.0 2.0 0.0 0.0 0.0 32.0 0.0 44.0 1.0 21.0 34.0 0
MA0521.1_rc_shift3 (Tcf12_rc)				; oligos_7nt_mkv4_m41 versus MA0521.1_rc (Tcf12_rc); m=8/21; ncol2=11; w=9; offset=2; strand=R; shift=3; score=0.520947; ---cwsCAGCTGYy- ; cor=; Ncor= a 0 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 c 0 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 g 0 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 t 0 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0
MA0832.1_rc_shift2 (Tcf21_rc)				; oligos_7nt_mkv4_m41 versus MA0832.1_rc (Tcf21_rc); m=9/21; ncol2=14; w=10; offset=1; strand=R; shift=2; score=0.513294; --ryAACAGCTGTTr ; cor=; Ncor= a 0 0 60.0 19.0 171.0 171.0 0.0 171.0 1.0 2.0 0.0 0.0 0.0 3.0 46.0 c 0 0 32.0 80.0 0.0 20.0 171.0 0.0 1.0 171.0 0.0 0.0 0.0 23.0 22.0 g 0 0 49.0 23.0 23.0 4.0 0.0 0.0 171.0 0.0 1.0 171.0 10.0 1.0 76.0 t 0 0 30.0 50.0 5.0 0.0 0.0 0.0 0.0 0.0 171.0 0.0 171.0 171.0 28.0
MA0691.1_shift4 (TFAP4)				; oligos_7nt_mkv4_m41 versus MA0691.1 (TFAP4); m=10/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.506087; ----AwCAGCTGwT- ; cor=; Ncor= a 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 c 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 g 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 t 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0
MA1485.1_shift2 (FERD3L)				; oligos_7nt_mkv4_m41 versus MA1485.1 (FERD3L); m=11/21; ncol2=14; w=10; offset=1; strand=D; shift=2; score=0.502595; --GyrmCAGCTGTyA ; cor=; Ncor= a 0 0 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 c 0 0 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 g 0 0 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 t 0 0 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0
MA0816.1_shift4 (Ascl2)				; oligos_7nt_mkv4_m41 versus MA0816.1 (Ascl2); m=12/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.493682; ----arCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 c 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 g 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 t 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0
MA0665.1_shift4 (MSC)				; oligos_7nt_mkv4_m41 versus MA0665.1 (MSC); m=13/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.483599; ----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 69.0 69.0 0.0 69.0 0.0 0.0 0.0 0.0 3.0 0.0 0 c 0 0 0 0 0.0 12.0 69.0 0.0 12.0 69.0 0.0 0.0 10.0 9.0 0 g 0 0 0 0 18.0 3.0 3.0 0.0 69.0 3.0 0.0 69.0 4.0 4.0 0 t 0 0 0 0 7.0 0.0 1.0 0.0 0.0 0.0 69.0 4.0 69.0 69.0 0
MA1472.1_shift4 (BHLHA15(var.2))				; oligos_7nt_mkv4_m41 versus MA1472.1 (BHLHA15(var.2)); m=14/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.481772; ----avCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 697.0 897.0 47.0 1504.0 11.0 445.0 54.0 0.0 54.0 202.0 0 c 0 0 0 0 281.0 607.0 1504.0 33.0 30.0 1504.0 4.0 0.0 610.0 410.0 0 g 0 0 0 0 357.0 591.0 6.0 33.0 1504.0 72.0 0.0 1504.0 489.0 316.0 0 t 0 0 0 0 170.0 81.0 33.0 137.0 467.0 11.0 1504.0 0.0 1015.0 577.0 0
MA1467.1_shift4 (ATOH1(var.2))				; oligos_7nt_mkv4_m41 versus MA1467.1 (ATOH1(var.2)); m=15/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.480454; ----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0
MA1635.1_shift4 (BHLHE22(var.2))				; oligos_7nt_mkv4_m41 versus MA1635.1 (BHLHE22(var.2)); m=16/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.478156; ----csCAGCTGsg- ; cor=; Ncor= a 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 c 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 g 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 t 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0
MA0500.2_shift3 (MYOG)				; oligos_7nt_mkv4_m41 versus MA0500.2 (MYOG); m=17/21; ncol2=12; w=9; offset=2; strand=D; shift=3; score=0.465933; ---sarCAGCTGyts ; cor=; Ncor= a 0 0 0 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 c 0 0 0 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 g 0 0 0 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 t 0 0 0 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0
MA0667.1_shift4 (MYF6)				; oligos_7nt_mkv4_m41 versus MA0667.1 (MYF6); m=18/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.438469; ----AACArCTGTY- ; cor=; Ncor= a 0 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 c 0 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 g 0 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 t 0 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0
MA0820.1_shift4 (FIGLA)				; oligos_7nt_mkv4_m41 versus MA0820.1 (FIGLA); m=19/21; ncol2=10; w=8; offset=3; strand=D; shift=4; score=0.435887; ----wmCACCTGkw- ; cor=; Ncor= a 0 0 0 0 886.0 690.0 0.0 1780.0 0.0 9.0 56.0 36.0 154.0 455.0 0 c 0 0 0 0 270.0 693.0 1780.0 46.0 1780.0 1780.0 0.0 33.0 225.0 283.0 0 g 0 0 0 0 175.0 160.0 0.0 0.0 527.0 311.0 17.0 1780.0 569.0 289.0 0 t 0 0 0 0 449.0 237.0 29.0 14.0 0.0 0.0 1780.0 65.0 832.0 753.0 0
MA0807.1_rc_shift0 (TBX5_rc)				; oligos_7nt_mkv4_m41 versus MA0807.1_rc (TBX5_rc); m=20/21; ncol2=8; w=7; offset=-1; strand=R; shift=0; score=0.417034; TmACACCT------- ; cor=; Ncor= a 283.0 915.0 1804.0 0.0 1804.0 28.0 133.0 207.0 0 0 0 0 0 0 0 c 343.0 1804.0 201.0 1804.0 166.0 1804.0 1804.0 409.0 0 0 0 0 0 0 0 g 76.0 616.0 225.0 0.0 131.0 0.0 190.0 89.0 0 0 0 0 0 0 0 t 1804.0 126.0 162.0 27.0 45.0 0.0 235.0 1804.0 0 0 0 0 0 0 0
MA1628.1_shift4 (Zic1::Zic2)				; oligos_7nt_mkv4_m41 versus MA1628.1 (Zic1::Zic2); m=21/21; ncol2=11; w=8; offset=3; strand=D; shift=4; score=0.406579; ----cvCAGCAGGsr ; cor=; Ncor= a 0 0 0 0 2072.0 3057.0 29.0 9238.0 96.0 75.0 8950.0 11.0 46.0 2429.0 2524.0 c 0 0 0 0 4620.0 2589.0 9594.0 384.0 195.0 9293.0 311.0 512.0 91.0 2516.0 2154.0 g 0 0 0 0 2206.0 2773.0 106.0 266.0 9527.0 96.0 627.0 9279.0 9631.0 2775.0 3506.0 t 0 0 0 0 994.0 1473.0 163.0 4.0 74.0 428.0 4.0 90.0 124.0 2172.0 1708.0