One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m11/peak-motifs_oligos_8nt_mkv5_m11.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m11/peak-motifs_oligos_8nt_mkv5_m11_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv5_m11_shift3 ; 31 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_8nt_mkv5_m11_shift3 (oligos_8nt_mkv5_m11oligos_8nt_mkv5_m11)
; oligos_8nt_mkv5_m11 (oligos_8nt_mkv5_m11oligos_8nt_mkv5_m11); m=0 (reference); ncol1=13; shift=3; ncol=16; ---ggAACAGCTGagv ; Alignment reference a 0 0 0 156 128 476 623 1 653 7 8 6 4 443 139 172 c 0 0 0 112 148 53 11 648 2 0 627 1 11 74 158 199 g 0 0 0 282 235 120 22 8 2 649 24 1 641 42 212 185 t 0 0 0 110 149 11 4 3 3 4 1 652 4 101 151 104

MA1641.1_shift4 (MYF5)
; oligos_8nt_mkv5_m11 versus MA1641.1 (MYF5); m=1/30; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.832474; ----gvaCAGCTGtbc ; cor=; Ncor= a 0 0 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 c 0 0 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 g 0 0 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 t 0 0 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0

MA1619.1_shift4 (Ptf1a(var.2))
; oligos_8nt_mkv5_m11 versus MA1619.1 (Ptf1a(var.2)); m=2/30; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.828965; ----rmaCAGCTGtky ; cor=; Ncor= a 0 0 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 c 0 0 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 g 0 0 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 t 0 0 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0

MA0832.1_shift3 (Tcf21)
; oligos_8nt_mkv5_m11 versus MA0832.1 (Tcf21); m=3/30; ncol2=14; w=13; offset=0; strand=D; shift=3; score=0.801316; ---ryAACAGCTGTTr ; cor=; Ncor= a 0 0 0 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 c 0 0 0 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 g 0 0 0 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 t 0 0 0 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0

MA0500.2_rc_shift4 (MYOG_rc)
; oligos_8nt_mkv5_m11 versus MA0500.2_rc (MYOG_rc); m=4/30; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.800073; ----sarCAGCTGyts ; cor=; Ncor= a 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 c 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 g 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 t 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0

MA0499.2_rc_shift3 (MYOD1_rc)
; oligos_8nt_mkv5_m11 versus MA0499.2_rc (MYOD1_rc); m=5/30; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.79491; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0

MA0521.1_shift5 (Tcf12)
; oligos_8nt_mkv5_m11 versus MA0521.1 (Tcf12); m=6/30; ncol2=11; w=11; offset=2; strand=D; shift=5; score=0.78611; -----rRCAGCTGswg ; cor=; Ncor= a 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 c 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 g 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 t 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0

MA1618.1_rc_shift3 (Ptf1a_rc)
; oligos_8nt_mkv5_m11 versus MA1618.1_rc (Ptf1a_rc); m=7/30; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.766195; ---dmaaCATCTGtkh ; cor=; Ncor= a 0 0 0 3622.0 3685.0 8294.0 8564.0 210.0 13973.0 148.0 653.0 106.0 172.0 726.0 2735.0 3699.0 c 0 0 0 3376.0 3664.0 2295.0 2854.0 13868.0 118.0 437.0 13072.0 153.0 130.0 2414.0 3568.0 3661.0 g 0 0 0 3689.0 3601.0 2341.0 2058.0 122.0 224.0 1724.0 466.0 118.0 14006.0 2747.0 3662.0 2989.0 t 0 0 0 3754.0 3491.0 1511.0 965.0 241.0 126.0 12132.0 250.0 14064.0 133.0 8554.0 4476.0 4092.0

MA1485.1_rc_shift3 (FERD3L_rc)
; oligos_8nt_mkv5_m11 versus MA1485.1_rc (FERD3L_rc); m=8/30; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.764517; ---GTrACAGCTGkyr ; cor=; Ncor= a 0 0 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 c 0 0 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 g 0 0 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 t 0 0 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0

MA1593.1_shift4 (ZNF317)
; oligos_8nt_mkv5_m11 versus MA1593.1 (ZNF317); m=9/30; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.746672; ----wrACAGCAGAyw ; cor=; Ncor= a 0 0 0 0 2959.0 4274.0 9381.0 281.0 10344.0 691.0 395.0 9323.0 284.0 10825.0 2072.0 3852.0 c 0 0 0 0 1201.0 2141.0 357.0 10821.0 85.0 192.0 10608.0 250.0 186.0 208.0 4399.0 1709.0 g 0 0 0 0 1985.0 3670.0 480.0 183.0 317.0 10374.0 223.0 289.0 10730.0 206.0 1334.0 1481.0 t 0 0 0 0 5318.0 1378.0 1245.0 178.0 717.0 206.0 237.0 1601.0 263.0 224.0 3658.0 4421.0

MA0745.2_rc_shift3 (SNAI2_rc)
; oligos_8nt_mkv5_m11 versus MA0745.2_rc (SNAI2_rc); m=10/30; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.718878; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0

MA0691.1_shift5 (TFAP4)
; oligos_8nt_mkv5_m11 versus MA0691.1 (TFAP4); m=11/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.717249; -----AwCAGCTGwT- ; cor=; Ncor= a 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 c 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 g 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 t 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0

MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)
; oligos_8nt_mkv5_m11 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=12/30; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.701163; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0

MA1467.1_shift5 (ATOH1(var.2))
; oligos_8nt_mkv5_m11 versus MA1467.1 (ATOH1(var.2)); m=13/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.686656; -----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0

MA1621.1_rc_shift3 (Rbpjl_rc)
; oligos_8nt_mkv5_m11 versus MA1621.1_rc (Rbpjl_rc); m=14/30; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.684502; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0

MA0665.1_rc_shift5 (MSC_rc)
; oligos_8nt_mkv5_m11 versus MA0665.1_rc (MSC_rc); m=15/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.674048; -----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 c 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 g 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 t 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0

MA1472.1_rc_shift5 (BHLHA15(var.2)_rc)
; oligos_8nt_mkv5_m11 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=16/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.670438; -----rrCAGCTGbt- ; cor=; Ncor= a 0 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 c 0 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 g 0 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 t 0 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0

MA0091.1_shift3 (TAL1::TCF3)
; oligos_8nt_mkv5_m11 versus MA0091.1 (TAL1::TCF3); m=17/30; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.662917; ---mgAmCAKMTGkT- ; cor=; Ncor= a 0 0 0 13.0 9.0 39.0 20.0 0.0 44.0 0.0 12.0 0.0 0.0 0.0 4.0 0 c 0 0 0 14.0 10.0 0.0 24.0 43.0 0.0 1.0 32.0 0.0 0.0 3.0 4.0 0 g 0 0 0 8.0 20.0 3.0 0.0 1.0 0.0 11.0 0.0 0.0 43.0 20.0 2.0 0 t 0 0 0 9.0 5.0 2.0 0.0 0.0 0.0 32.0 0.0 44.0 1.0 21.0 34.0 0

MA0816.1_shift5 (Ascl2)
; oligos_8nt_mkv5_m11 versus MA0816.1 (Ascl2); m=18/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.658823; -----arCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 c 0 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 g 0 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 t 0 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0

MA1635.1_shift5 (BHLHE22(var.2))
; oligos_8nt_mkv5_m11 versus MA1635.1 (BHLHE22(var.2)); m=19/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.652545; -----csCAGCTGsg- ; cor=; Ncor= a 0 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 c 0 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 g 0 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 t 0 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0

MA0667.1_shift5 (MYF6)
; oligos_8nt_mkv5_m11 versus MA0667.1 (MYF6); m=20/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.63967; -----AACArCTGTY- ; cor=; Ncor= a 0 0 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 c 0 0 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 g 0 0 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 t 0 0 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0

MA0698.1_rc_shift4 (ZBTB18_rc)
; oligos_8nt_mkv5_m11 versus MA0698.1_rc (ZBTB18_rc); m=21/30; ncol2=13; w=12; offset=1; strand=R; shift=4; score=0.619787; ----vmACATCTGGat ; cor=; Ncor= a 0 0 0 0 4027.0 8140.0 13670.0 1.0 13670.0 297.0 6.0 206.0 8.0 60.0 13670.0 3319.0 c 0 0 0 0 3876.0 5530.0 36.0 13670.0 94.0 278.0 13670.0 33.0 3.0 1899.0 5212.0 2535.0 g 0 0 0 0 4042.0 177.0 314.0 1.0 15.0 1048.0 245.0 5.0 13670.0 13670.0 1937.0 753.0 t 0 0 0 0 1725.0 210.0 48.0 3.0 14.0 13670.0 3.0 13670.0 21.0 3618.0 1177.0 7064.0

MA1100.2_rc_shift5 (ASCL1_rc)
; oligos_8nt_mkv5_m11 versus MA1100.2_rc (ASCL1_rc); m=22/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.616516; -----rgCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 c 0 0 0 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 g 0 0 0 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 t 0 0 0 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0

MA1123.2_rc_shift4 (TWIST1_rc)
; oligos_8nt_mkv5_m11 versus MA1123.2_rc (TWIST1_rc); m=23/30; ncol2=13; w=12; offset=1; strand=R; shift=4; score=0.605024; ----avaCATCTGGww ; cor=; Ncor= a 0 0 0 0 7736.0 8588.0 18544.0 582.0 26232.0 214.0 1407.0 274.0 174.0 852.0 9428.0 8259.0 c 0 0 0 0 6213.0 7273.0 4069.0 25975.0 288.0 908.0 24166.0 210.0 117.0 2336.0 5772.0 5722.0 g 0 0 0 0 6561.0 7402.0 2919.0 396.0 456.0 1687.0 1320.0 136.0 26665.0 20412.0 4597.0 5530.0 t 0 0 0 0 6823.0 4070.0 1801.0 380.0 357.0 24524.0 440.0 26713.0 377.0 3733.0 7536.0 7822.0

MA0820.1_rc_shift5 (FIGLA_rc)
; oligos_8nt_mkv5_m11 versus MA0820.1_rc (FIGLA_rc); m=24/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.598501; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0

MA1655.1_shift2 (ZNF341)
; oligos_8nt_mkv5_m11 versus MA1655.1 (ZNF341); m=25/30; ncol2=12; w=11; offset=-1; strand=D; shift=2; score=0.597363; --grGAACAGCcas-- ; cor=; Ncor= a 0 0 4266.0 5117.0 1504.0 17074.0 17700.0 301.0 17627.0 168.0 227.0 3082.0 5305.0 3756.0 0 0 c 0 0 4256.0 2180.0 2043.0 955.0 211.0 16813.0 399.0 359.0 18003.0 10946.0 4431.0 5745.0 0 0 g 0 0 5798.0 8832.0 13739.0 513.0 576.0 1033.0 468.0 17972.0 270.0 2289.0 4672.0 5691.0 0 0 t 0 0 4408.0 2599.0 1442.0 186.0 241.0 581.0 234.0 229.0 228.0 2411.0 4320.0 3536.0 0 0

MA0048.2_rc_shift5 (NHLH1_rc)
; oligos_8nt_mkv5_m11 versus MA0048.2_rc (NHLH1_rc); m=26/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.586177; -----mGCAGCTGCg- ; cor=; Ncor= a 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 c 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 g 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 t 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0

MA0744.2_shift0 (SCRT2)
; oligos_8nt_mkv5_m11 versus MA0744.2 (SCRT2); m=27/30; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.58101; rrwkCAACAGGTggtw ; cor=; Ncor= a 18855.0 23310.0 29945.0 5353.0 1378.0 53425.0 62366.0 231.0 63880.0 7306.0 1862.0 2078.0 10481.0 13383.0 16058.0 17881.0 c 13345.0 12732.0 6319.0 7236.0 59161.0 5536.0 413.0 64856.0 294.0 728.0 972.0 3475.0 5661.0 11351.0 16085.0 13846.0 g 17680.0 17497.0 12473.0 35769.0 1339.0 2265.0 1878.0 319.0 252.0 56105.0 60636.0 1168.0 38133.0 25288.0 14716.0 12430.0 t 15730.0 12071.0 16873.0 17252.0 3732.0 4384.0 953.0 204.0 1184.0 1471.0 2140.0 58889.0 11335.0 15588.0 18751.0 21453.0

MA0743.2_shift0 (SCRT1)
; oligos_8nt_mkv5_m11 versus MA0743.2 (SCRT1); m=28/30; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.573771; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0

MA1559.1_shift5 (SNAI3)
; oligos_8nt_mkv5_m11 versus MA1559.1 (SNAI3); m=29/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.551021; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0

MA1647.1_rc_shift1 (PRDM4_rc)
; oligos_8nt_mkv5_m11 versus MA1647.1_rc (PRDM4_rc); m=30/30; ncol2=11; w=9; offset=-2; strand=R; shift=1; score=0.42692; -twGAAACAGhy---- ; cor=; Ncor= a 0 1799.0 2962.0 292.0 6811.0 6288.0 6889.0 39.0 5543.0 154.0 2123.0 1559.0 0 0 0 0 c 0 1344.0 726.0 129.0 111.0 393.0 82.0 6813.0 566.0 316.0 2079.0 2553.0 0 0 0 0 g 0 1532.0 1456.0 6353.0 138.0 405.0 137.0 110.0 286.0 6504.0 1012.0 1163.0 0 0 0 0 t 0 2580.0 2111.0 481.0 195.0 169.0 147.0 293.0 860.0 281.0 2041.0 1980.0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_8nt_mkv5_m11_shift3 (oligos_8nt_mkv5_m11oligos_8nt_mkv5_m11)				; oligos_8nt_mkv5_m11 (oligos_8nt_mkv5_m11oligos_8nt_mkv5_m11); m=0 (reference); ncol1=13; shift=3; ncol=16; ---ggAACAGCTGagv ; Alignment reference a 0 0 0 156 128 476 623 1 653 7 8 6 4 443 139 172 c 0 0 0 112 148 53 11 648 2 0 627 1 11 74 158 199 g 0 0 0 282 235 120 22 8 2 649 24 1 641 42 212 185 t 0 0 0 110 149 11 4 3 3 4 1 652 4 101 151 104
MA1641.1_shift4 (MYF5)				; oligos_8nt_mkv5_m11 versus MA1641.1 (MYF5); m=1/30; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.832474; ----gvaCAGCTGtbc ; cor=; Ncor= a 0 0 0 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 c 0 0 0 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 g 0 0 0 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 t 0 0 0 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0
MA1619.1_shift4 (Ptf1a(var.2))				; oligos_8nt_mkv5_m11 versus MA1619.1 (Ptf1a(var.2)); m=2/30; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.828965; ----rmaCAGCTGtky ; cor=; Ncor= a 0 0 0 0 1869.0 1978.0 4346.0 49.0 7119.0 34.0 224.0 26.0 27.0 535.0 1221.0 1602.0 c 0 0 0 0 1803.0 2430.0 1070.0 7149.0 41.0 307.0 6697.0 66.0 27.0 1312.0 1632.0 1977.0 g 0 0 0 0 1974.0 1629.0 1308.0 28.0 65.0 6689.0 299.0 40.0 7150.0 1065.0 2426.0 1803.0 t 0 0 0 0 1607.0 1216.0 529.0 27.0 28.0 223.0 33.0 7121.0 49.0 4341.0 1974.0 1871.0
MA0832.1_shift3 (Tcf21)				; oligos_8nt_mkv5_m11 versus MA0832.1 (Tcf21); m=3/30; ncol2=14; w=13; offset=0; strand=D; shift=3; score=0.801316; ---ryAACAGCTGTTr ; cor=; Ncor= a 0 0 0 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 c 0 0 0 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 g 0 0 0 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 t 0 0 0 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0
MA0500.2_rc_shift4 (MYOG_rc)				; oligos_8nt_mkv5_m11 versus MA0500.2_rc (MYOG_rc); m=4/30; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.800073; ----sarCAGCTGyts ; cor=; Ncor= a 0 0 0 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 c 0 0 0 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 g 0 0 0 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 t 0 0 0 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0
MA0499.2_rc_shift3 (MYOD1_rc)				; oligos_8nt_mkv5_m11 versus MA0499.2_rc (MYOD1_rc); m=5/30; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.79491; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0
MA0521.1_shift5 (Tcf12)				; oligos_8nt_mkv5_m11 versus MA0521.1 (Tcf12); m=6/30; ncol2=11; w=11; offset=2; strand=D; shift=5; score=0.78611; -----rRCAGCTGswg ; cor=; Ncor= a 0 0 0 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 c 0 0 0 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 g 0 0 0 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 t 0 0 0 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0
MA1618.1_rc_shift3 (Ptf1a_rc)				; oligos_8nt_mkv5_m11 versus MA1618.1_rc (Ptf1a_rc); m=7/30; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.766195; ---dmaaCATCTGtkh ; cor=; Ncor= a 0 0 0 3622.0 3685.0 8294.0 8564.0 210.0 13973.0 148.0 653.0 106.0 172.0 726.0 2735.0 3699.0 c 0 0 0 3376.0 3664.0 2295.0 2854.0 13868.0 118.0 437.0 13072.0 153.0 130.0 2414.0 3568.0 3661.0 g 0 0 0 3689.0 3601.0 2341.0 2058.0 122.0 224.0 1724.0 466.0 118.0 14006.0 2747.0 3662.0 2989.0 t 0 0 0 3754.0 3491.0 1511.0 965.0 241.0 126.0 12132.0 250.0 14064.0 133.0 8554.0 4476.0 4092.0
MA1485.1_rc_shift3 (FERD3L_rc)				; oligos_8nt_mkv5_m11 versus MA1485.1_rc (FERD3L_rc); m=8/30; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.764517; ---GTrACAGCTGkyr ; cor=; Ncor= a 0 0 0 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 c 0 0 0 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 g 0 0 0 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 t 0 0 0 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0
MA1593.1_shift4 (ZNF317)				; oligos_8nt_mkv5_m11 versus MA1593.1 (ZNF317); m=9/30; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.746672; ----wrACAGCAGAyw ; cor=; Ncor= a 0 0 0 0 2959.0 4274.0 9381.0 281.0 10344.0 691.0 395.0 9323.0 284.0 10825.0 2072.0 3852.0 c 0 0 0 0 1201.0 2141.0 357.0 10821.0 85.0 192.0 10608.0 250.0 186.0 208.0 4399.0 1709.0 g 0 0 0 0 1985.0 3670.0 480.0 183.0 317.0 10374.0 223.0 289.0 10730.0 206.0 1334.0 1481.0 t 0 0 0 0 5318.0 1378.0 1245.0 178.0 717.0 206.0 237.0 1601.0 263.0 224.0 3658.0 4421.0
MA0745.2_rc_shift3 (SNAI2_rc)				; oligos_8nt_mkv5_m11 versus MA0745.2_rc (SNAI2_rc); m=10/30; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.718878; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0
MA0691.1_shift5 (TFAP4)				; oligos_8nt_mkv5_m11 versus MA0691.1 (TFAP4); m=11/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.717249; -----AwCAGCTGwT- ; cor=; Ncor= a 0 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 c 0 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 g 0 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 t 0 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)				; oligos_8nt_mkv5_m11 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=12/30; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.701163; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0
MA1467.1_shift5 (ATOH1(var.2))				; oligos_8nt_mkv5_m11 versus MA1467.1 (ATOH1(var.2)); m=13/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.686656; -----AACAGCTGTY- ; cor=; Ncor= a 0 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 c 0 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 g 0 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 t 0 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0
MA1621.1_rc_shift3 (Rbpjl_rc)				; oligos_8nt_mkv5_m11 versus MA1621.1_rc (Rbpjl_rc); m=14/30; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.684502; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0
MA0665.1_rc_shift5 (MSC_rc)				; oligos_8nt_mkv5_m11 versus MA0665.1_rc (MSC_rc); m=15/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.674048; -----AACAGCTGTT- ; cor=; Ncor= a 0 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 c 0 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 g 0 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 t 0 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0
MA1472.1_rc_shift5 (BHLHA15(var.2)_rc)				; oligos_8nt_mkv5_m11 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=16/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.670438; -----rrCAGCTGbt- ; cor=; Ncor= a 0 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 c 0 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 g 0 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 t 0 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0
MA0091.1_shift3 (TAL1::TCF3)				; oligos_8nt_mkv5_m11 versus MA0091.1 (TAL1::TCF3); m=17/30; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.662917; ---mgAmCAKMTGkT- ; cor=; Ncor= a 0 0 0 13.0 9.0 39.0 20.0 0.0 44.0 0.0 12.0 0.0 0.0 0.0 4.0 0 c 0 0 0 14.0 10.0 0.0 24.0 43.0 0.0 1.0 32.0 0.0 0.0 3.0 4.0 0 g 0 0 0 8.0 20.0 3.0 0.0 1.0 0.0 11.0 0.0 0.0 43.0 20.0 2.0 0 t 0 0 0 9.0 5.0 2.0 0.0 0.0 0.0 32.0 0.0 44.0 1.0 21.0 34.0 0
MA0816.1_shift5 (Ascl2)				; oligos_8nt_mkv5_m11 versus MA0816.1 (Ascl2); m=18/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.658823; -----arCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 0 237.0 128.0 3.0 300.0 7.0 3.0 4.0 0.0 6.0 34.0 0 c 0 0 0 0 0 36.0 41.0 300.0 0.0 23.0 300.0 0.0 1.0 206.0 101.0 0 g 0 0 0 0 0 63.0 172.0 0.0 0.0 300.0 2.0 0.0 300.0 15.0 28.0 0 t 0 0 0 0 0 16.0 1.0 1.0 15.0 18.0 1.0 300.0 2.0 94.0 199.0 0
MA1635.1_shift5 (BHLHE22(var.2))				; oligos_8nt_mkv5_m11 versus MA1635.1 (BHLHE22(var.2)); m=19/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.652545; -----csCAGCTGsg- ; cor=; Ncor= a 0 0 0 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 c 0 0 0 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 g 0 0 0 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 t 0 0 0 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0
MA0667.1_shift5 (MYF6)				; oligos_8nt_mkv5_m11 versus MA0667.1 (MYF6); m=20/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.63967; -----AACArCTGTY- ; cor=; Ncor= a 0 0 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 c 0 0 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 g 0 0 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 t 0 0 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0
MA0698.1_rc_shift4 (ZBTB18_rc)				; oligos_8nt_mkv5_m11 versus MA0698.1_rc (ZBTB18_rc); m=21/30; ncol2=13; w=12; offset=1; strand=R; shift=4; score=0.619787; ----vmACATCTGGat ; cor=; Ncor= a 0 0 0 0 4027.0 8140.0 13670.0 1.0 13670.0 297.0 6.0 206.0 8.0 60.0 13670.0 3319.0 c 0 0 0 0 3876.0 5530.0 36.0 13670.0 94.0 278.0 13670.0 33.0 3.0 1899.0 5212.0 2535.0 g 0 0 0 0 4042.0 177.0 314.0 1.0 15.0 1048.0 245.0 5.0 13670.0 13670.0 1937.0 753.0 t 0 0 0 0 1725.0 210.0 48.0 3.0 14.0 13670.0 3.0 13670.0 21.0 3618.0 1177.0 7064.0
MA1100.2_rc_shift5 (ASCL1_rc)				; oligos_8nt_mkv5_m11 versus MA1100.2_rc (ASCL1_rc); m=22/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.616516; -----rgCAGCTGyy- ; cor=; Ncor= a 0 0 0 0 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 c 0 0 0 0 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 g 0 0 0 0 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 t 0 0 0 0 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0
MA1123.2_rc_shift4 (TWIST1_rc)				; oligos_8nt_mkv5_m11 versus MA1123.2_rc (TWIST1_rc); m=23/30; ncol2=13; w=12; offset=1; strand=R; shift=4; score=0.605024; ----avaCATCTGGww ; cor=; Ncor= a 0 0 0 0 7736.0 8588.0 18544.0 582.0 26232.0 214.0 1407.0 274.0 174.0 852.0 9428.0 8259.0 c 0 0 0 0 6213.0 7273.0 4069.0 25975.0 288.0 908.0 24166.0 210.0 117.0 2336.0 5772.0 5722.0 g 0 0 0 0 6561.0 7402.0 2919.0 396.0 456.0 1687.0 1320.0 136.0 26665.0 20412.0 4597.0 5530.0 t 0 0 0 0 6823.0 4070.0 1801.0 380.0 357.0 24524.0 440.0 26713.0 377.0 3733.0 7536.0 7822.0
MA0820.1_rc_shift5 (FIGLA_rc)				; oligos_8nt_mkv5_m11 versus MA0820.1_rc (FIGLA_rc); m=24/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.598501; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0
MA1655.1_shift2 (ZNF341)				; oligos_8nt_mkv5_m11 versus MA1655.1 (ZNF341); m=25/30; ncol2=12; w=11; offset=-1; strand=D; shift=2; score=0.597363; --grGAACAGCcas-- ; cor=; Ncor= a 0 0 4266.0 5117.0 1504.0 17074.0 17700.0 301.0 17627.0 168.0 227.0 3082.0 5305.0 3756.0 0 0 c 0 0 4256.0 2180.0 2043.0 955.0 211.0 16813.0 399.0 359.0 18003.0 10946.0 4431.0 5745.0 0 0 g 0 0 5798.0 8832.0 13739.0 513.0 576.0 1033.0 468.0 17972.0 270.0 2289.0 4672.0 5691.0 0 0 t 0 0 4408.0 2599.0 1442.0 186.0 241.0 581.0 234.0 229.0 228.0 2411.0 4320.0 3536.0 0 0
MA0048.2_rc_shift5 (NHLH1_rc)				; oligos_8nt_mkv5_m11 versus MA0048.2_rc (NHLH1_rc); m=26/30; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.586177; -----mGCAGCTGCg- ; cor=; Ncor= a 0 0 0 0 0 1489.0 350.0 1.0 2166.0 0.0 114.0 0.0 0.0 142.0 111.0 0 c 0 0 0 0 0 2166.0 102.0 2166.0 4.0 124.0 2166.0 1.0 0.0 2166.0 181.0 0 g 0 0 0 0 0 736.0 2166.0 4.0 4.0 2166.0 301.0 3.0 2166.0 179.0 2166.0 0 t 0 0 0 0 0 308.0 296.0 2.0 0.0 96.0 0.0 2166.0 3.0 461.0 788.0 0
MA0744.2_shift0 (SCRT2)				; oligos_8nt_mkv5_m11 versus MA0744.2 (SCRT2); m=27/30; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.58101; rrwkCAACAGGTggtw ; cor=; Ncor= a 18855.0 23310.0 29945.0 5353.0 1378.0 53425.0 62366.0 231.0 63880.0 7306.0 1862.0 2078.0 10481.0 13383.0 16058.0 17881.0 c 13345.0 12732.0 6319.0 7236.0 59161.0 5536.0 413.0 64856.0 294.0 728.0 972.0 3475.0 5661.0 11351.0 16085.0 13846.0 g 17680.0 17497.0 12473.0 35769.0 1339.0 2265.0 1878.0 319.0 252.0 56105.0 60636.0 1168.0 38133.0 25288.0 14716.0 12430.0 t 15730.0 12071.0 16873.0 17252.0 3732.0 4384.0 953.0 204.0 1184.0 1471.0 2140.0 58889.0 11335.0 15588.0 18751.0 21453.0
MA0743.2_shift0 (SCRT1)				; oligos_8nt_mkv5_m11 versus MA0743.2 (SCRT1); m=28/30; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.573771; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0
MA1559.1_shift5 (SNAI3)				; oligos_8nt_mkv5_m11 versus MA1559.1 (SNAI3); m=29/30; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.551021; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0
MA1647.1_rc_shift1 (PRDM4_rc)				; oligos_8nt_mkv5_m11 versus MA1647.1_rc (PRDM4_rc); m=30/30; ncol2=11; w=9; offset=-2; strand=R; shift=1; score=0.42692; -twGAAACAGhy---- ; cor=; Ncor= a 0 1799.0 2962.0 292.0 6811.0 6288.0 6889.0 39.0 5543.0 154.0 2123.0 1559.0 0 0 0 0 c 0 1344.0 726.0 129.0 111.0 393.0 82.0 6813.0 566.0 316.0 2079.0 2553.0 0 0 0 0 g 0 1532.0 1456.0 6353.0 138.0 405.0 137.0 110.0 286.0 6504.0 1012.0 1163.0 0 0 0 0 t 0 2580.0 2111.0 481.0 195.0 169.0 147.0 293.0 860.0 281.0 2041.0 1980.0 0 0 0 0