One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m23/peak-motifs_oligos_8nt_mkv5_m23.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m23/peak-motifs_oligos_8nt_mkv5_m23_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv5_m23_shift3 ; 42 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_8nt_mkv5_m23_shift3 (oligos_8nt_mkv5_m23oligos_8nt_mkv5_m23)     
; oligos_8nt_mkv5_m23 (oligos_8nt_mkv5_m23oligos_8nt_mkv5_m23); m=0 (reference); ncol1=13; shift=3; ncol=16; ---rrAACAGaTGGys
; Alignment reference
a	0	0	0	79	82	250	283	1	310	15	204	5	0	8	51	72
c	0	0	0	54	61	20	4	304	1	6	42	1	0	20	96	99
g	0	0	0	130	122	39	24	6	0	292	59	0	311	274	78	84
t	0	0	0	51	49	5	3	3	3	1	9	308	3	12	89	59
MA1642.1_shift3 (NEUROG2(var.2)) 
; oligos_8nt_mkv5_m23 versus MA1642.1 (NEUROG2(var.2)); m=1/41; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.92728; ---rrraCAGATGGyv
; cor=; Ncor=
a	0	0	0	8690.0	9047.0	12089.0	16448.0	278.0	33720.0	400.0	32746.0	649.0	280.0	1523.0	6665.0	9464.0
c	0	0	0	7353.0	6843.0	6467.0	8154.0	33559.0	211.0	793.0	952.0	904.0	205.0	2966.0	10441.0	9034.0
g	0	0	0	10813.0	10123.0	11114.0	8039.0	317.0	301.0	30392.0	418.0	323.0	33422.0	24998.0	7581.0	8709.0
t	0	0	0	7535.0	8378.0	4721.0	1750.0	237.0	159.0	2806.0	275.0	32515.0	484.0	4904.0	9704.0	7184.0
MA1109.1_shift4 (NEUROD1) 
; oligos_8nt_mkv5_m23 versus MA1109.1 (NEUROD1); m=2/41; ncol2=13; w=12; offset=1; strand=D; shift=4; score=0.805629; ----graCAGATGGyr
; cor=; Ncor=
a	0	0	0	0	561.0	755.0	1289.0	17.0	2241.0	16.0	2034.0	55.0	13.0	59.0	373.0	692.0
c	0	0	0	0	429.0	323.0	452.0	2240.0	7.0	24.0	150.0	51.0	7.0	93.0	911.0	540.0
g	0	0	0	0	726.0	906.0	494.0	13.0	16.0	2152.0	77.0	19.0	2231.0	1962.0	418.0	599.0
t	0	0	0	0	566.0	298.0	47.0	12.0	18.0	90.0	21.0	2157.0	31.0	168.0	580.0	451.0
MA0499.2_rc_shift3 (MYOD1_rc) 
; oligos_8nt_mkv5_m23 versus MA0499.2_rc (MYOD1_rc); m=3/41; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.792462; ---rkrACAGGTGcwg
; cor=; Ncor=
a	0	0	0	9358.0	8151.0	9000.0	29644.0	238.0	33130.0	330.0	1226.0	587.0	269.0	2245.0	9291.0	7728.0
c	0	0	0	7495.0	6202.0	4440.0	1699.0	33468.0	366.0	932.0	7336.0	849.0	354.0	21884.0	8444.0	8118.0
g	0	0	0	11760.0	10485.0	19052.0	2555.0	386.0	563.0	32504.0	25275.0	583.0	33328.0	5622.0	7103.0	11279.0
t	0	0	0	5687.0	9462.0	1808.0	402.0	208.0	241.0	534.0	463.0	32281.0	349.0	4549.0	9462.0	7175.0
MA0745.2_rc_shift3 (SNAI2_rc) 
; oligos_8nt_mkv5_m23 versus MA0745.2_rc (SNAI2_rc); m=4/41; ncol2=13; w=13; offset=0; strand=R; shift=3; score=0.745702; ---rykACAGGTGcrt
; cor=; Ncor=
a	0	0	0	17906.0	8917.0	8747.0	37272.0	126.0	45229.0	344.0	234.0	227.0	622.0	2359.0	16344.0	9958.0
c	0	0	0	8219.0	12297.0	6281.0	1263.0	45257.0	196.0	487.0	326.0	424.0	323.0	26742.0	9490.0	11169.0
g	0	0	0	13476.0	11016.0	18771.0	6467.0	254.0	313.0	44739.0	45144.0	202.0	44463.0	6393.0	12314.0	10031.0
t	0	0	0	6215.0	13586.0	12017.0	814.0	179.0	78.0	246.0	112.0	44963.0	408.0	10322.0	7668.0	14658.0
MA1618.1_shift4 (Ptf1a) 
; oligos_8nt_mkv5_m23 versus MA1618.1 (Ptf1a); m=5/41; ncol2=13; w=12; offset=1; strand=D; shift=4; score=0.730524; ----dmaCAGATGttk
; cor=; Ncor=
a	0	0	0	0	4092.0	4476.0	8554.0	133.0	14064.0	250.0	12132.0	126.0	241.0	965.0	1511.0	3491.0
c	0	0	0	0	2989.0	3662.0	2747.0	14006.0	118.0	466.0	1724.0	224.0	122.0	2058.0	2341.0	3601.0
g	0	0	0	0	3661.0	3568.0	2414.0	130.0	153.0	13072.0	437.0	118.0	13868.0	2854.0	2295.0	3664.0
t	0	0	0	0	3699.0	2735.0	726.0	172.0	106.0	653.0	148.0	13973.0	210.0	8564.0	8294.0	3685.0
MA1123.2_shift3 (TWIST1) 
; oligos_8nt_mkv5_m23 versus MA1123.2 (TWIST1); m=6/41; ncol2=13; w=13; offset=0; strand=D; shift=3; score=0.72792; ---awwCCAGATGtbt
; cor=; Ncor=
a	0	0	0	8329.0	7822.0	7536.0	3733.0	377.0	26713.0	440.0	24524.0	357.0	380.0	1801.0	4070.0	6823.0
c	0	0	0	5761.0	5530.0	4597.0	20412.0	26665.0	136.0	1320.0	1687.0	456.0	396.0	2919.0	7402.0	6561.0
g	0	0	0	6485.0	5722.0	5772.0	2336.0	117.0	210.0	24166.0	908.0	288.0	25975.0	4069.0	7273.0	6213.0
t	0	0	0	6758.0	8259.0	9428.0	852.0	174.0	274.0	1407.0	214.0	26232.0	582.0	18544.0	8588.0	7736.0
MA1524.1_rc_shift4 (MSGN1_rc) 
; oligos_8nt_mkv5_m23 versus MA1524.1_rc (MSGN1_rc); m=7/41; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.713655; ----srmCAwwTGGys
; cor=; Ncor=
a	0	0	0	0	1228.0	3104.0	3269.0	0.0	6373.0	2607.0	3950.0	0.0	0.0	726.0	408.0	1488.0
c	0	0	0	0	1781.0	1503.0	3104.0	6373.0	17.0	814.0	112.0	374.0	17.0	1613.0	3277.0	1615.0
g	0	0	0	0	1976.0	3269.0	1132.0	10.0	287.0	190.0	627.0	0.0	6373.0	6373.0	576.0	2080.0
t	0	0	0	0	1388.0	514.0	412.0	0.0	10.0	3766.0	2424.0	6373.0	0.0	663.0	3096.0	1190.0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc) 
; oligos_8nt_mkv5_m23 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=8/41; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.705557; ----rmaCAGGTGtky
; cor=; Ncor=
a	0	0	0	0	2811.0	2745.0	6633.0	142.0	10014.0	129.0	426.0	114.0	107.0	826.0	1599.0	2324.0
c	0	0	0	0	2183.0	3341.0	1516.0	9972.0	98.0	294.0	1182.0	84.0	113.0	1410.0	2379.0	2664.0
g	0	0	0	0	3004.0	2527.0	1615.0	109.0	94.0	9612.0	8567.0	60.0	9887.0	1188.0	3700.0	2469.0
t	0	0	0	0	2293.0	1678.0	527.0	68.0	85.0	256.0	116.0	10033.0	184.0	6867.0	2613.0	2834.0
MA1621.1_rc_shift3 (Rbpjl_rc) 
; oligos_8nt_mkv5_m23 versus MA1621.1_rc (Rbpjl_rc); m=9/41; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.701521; ---grsaCAGGTGtkb
; cor=; Ncor=
a	0	0	0	2286.0	2537.0	2179.0	5784.0	124.0	9313.0	96.0	363.0	86.0	137.0	782.0	1364.0	2210.0
c	0	0	0	2281.0	1958.0	2687.0	1581.0	9295.0	132.0	317.0	672.0	110.0	103.0	1492.0	1802.0	2549.0
g	0	0	0	3003.0	2884.0	3247.0	1718.0	131.0	144.0	9005.0	8533.0	70.0	9273.0	1373.0	3117.0	2427.0
t	0	0	0	2082.0	2273.0	1539.0	569.0	102.0	63.0	234.0	84.0	9386.0	139.0	6005.0	3369.0	2466.0
MA0521.1_shift5 (Tcf12) 
; oligos_8nt_mkv5_m23 versus MA0521.1 (Tcf12); m=10/41; ncol2=11; w=11; offset=2; strand=D; shift=5; score=0.699795; -----rRCAGCTGswg
; cor=; Ncor=
a	0	0	0	0	0	6170.0	8820.0	0.0	12895.0	8.0	184.0	0.0	0.0	1875.0	3912.0	2863.0
c	0	0	0	0	0	1585.0	124.0	12895.0	0.0	0.0	10822.0	0.0	0.0	5527.0	2416.0	3005.0
g	0	0	0	0	0	5123.0	3951.0	0.0	0.0	12887.0	1889.0	0.0	12895.0	3811.0	2925.0	4836.0
t	0	0	0	0	0	17.0	0.0	0.0	0.0	0.0	0.0	12895.0	0.0	1682.0	3642.0	2191.0
MA1619.1_rc_shift4 (Ptf1a(var.2)_rc) 
; oligos_8nt_mkv5_m23 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=11/41; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.693442; ----rmaCAGCTGtky
; cor=; Ncor=
a	0	0	0	0	1871.0	1974.0	4341.0	49.0	7121.0	33.0	223.0	28.0	27.0	529.0	1216.0	1607.0
c	0	0	0	0	1803.0	2426.0	1065.0	7150.0	40.0	299.0	6689.0	65.0	28.0	1308.0	1629.0	1974.0
g	0	0	0	0	1977.0	1632.0	1312.0	27.0	66.0	6697.0	307.0	41.0	7149.0	1070.0	2430.0	1803.0
t	0	0	0	0	1602.0	1221.0	535.0	27.0	26.0	224.0	34.0	7119.0	49.0	4346.0	1978.0	1869.0
MA1641.1_shift4 (MYF5) 
; oligos_8nt_mkv5_m23 versus MA1641.1 (MYF5); m=12/41; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.692782; ----gvaCAGCTGtbc
; cor=; Ncor=
a	0	0	0	0	2698.0	3507.0	7490.0	95.0	10965.0	100.0	223.0	129.0	42.0	578.0	1572.0	2554.0
c	0	0	0	0	2700.0	2986.0	1368.0	10911.0	47.0	230.0	10657.0	68.0	161.0	1775.0	3146.0	3258.0
g	0	0	0	0	3258.0	3145.0	1774.0	161.0	69.0	10658.0	230.0	47.0	10912.0	1368.0	2985.0	2701.0
t	0	0	0	0	2554.0	1572.0	578.0	43.0	129.0	222.0	100.0	10966.0	95.0	7489.0	3507.0	2697.0
MA1485.1_rc_shift3 (FERD3L_rc) 
; oligos_8nt_mkv5_m23 versus MA1485.1_rc (FERD3L_rc); m=13/41; ncol2=14; w=13; offset=0; strand=R; shift=3; score=0.691835; ---GTrACAGCTGkyr
; cor=; Ncor=
a	0	0	0	48.0	958.0	14919.0	21065.0	0.0	29605.0	0.0	4691.0	144.0	0.0	1710.0	74.0	9557.0
c	0	0	0	0.0	9815.0	5920.0	3395.0	29605.0	210.0	471.0	29605.0	118.0	0.0	3142.0	12703.0	348.0
g	0	0	0	29605.0	809.0	8664.0	3878.0	0.0	129.0	29605.0	841.0	126.0	29605.0	9363.0	2443.0	20049.0
t	0	0	0	0.0	29605.0	103.0	1268.0	0.0	81.0	3649.0	0.0	29605.0	36.0	15390.0	14384.0	450.0
MA0832.1_shift3 (Tcf21) 
; oligos_8nt_mkv5_m23 versus MA0832.1 (Tcf21); m=14/41; ncol2=14; w=13; offset=0; strand=D; shift=3; score=0.688766; ---ryAACAGCTGTTr
; cor=; Ncor=
a	0	0	0	55.0	28.0	171.0	171.0	0.0	171.0	0.0	0.0	0.0	0.0	0.0	5.0	50.0
c	0	0	0	29.0	76.0	1.0	10.0	171.0	1.0	0.0	171.0	0.0	0.0	4.0	23.0	23.0
g	0	0	0	70.0	22.0	23.0	0.0	0.0	0.0	171.0	1.0	0.0	171.0	20.0	0.0	80.0
t	0	0	0	17.0	46.0	3.0	0.0	0.0	0.0	2.0	1.0	171.0	0.0	171.0	171.0	19.0
MA0091.1_rc_shift5 (TAL1::TCF3_rc) 
; oligos_8nt_mkv5_m23 versus MA0091.1_rc (TAL1::TCF3_rc); m=15/41; ncol2=12; w=11; offset=2; strand=R; shift=5; score=0.681044; -----AmCAKMTGkTc
; cor=; Ncor=
a	0	0	0	0	0	34.0	21.0	1.0	44.0	0.0	32.0	0.0	0.0	0.0	2.0	5.0
c	0	0	0	0	0	2.0	20.0	43.0	0.0	0.0	11.0	0.0	1.0	0.0	3.0	20.0
g	0	0	0	0	0	4.0	3.0	0.0	0.0	32.0	1.0	0.0	43.0	24.0	0.0	10.0
t	0	0	0	0	0	4.0	0.0	0.0	0.0	12.0	0.0	44.0	0.0	20.0	39.0	9.0
MA0500.2_rc_shift4 (MYOG_rc) 
; oligos_8nt_mkv5_m23 versus MA0500.2_rc (MYOG_rc); m=16/41; ncol2=12; w=12; offset=1; strand=R; shift=4; score=0.659717; ----sarCAGCTGyts
; cor=; Ncor=
a	0	0	0	0	5310.0	8475.0	7192.0	88.0	21777.0	95.0	169.0	163.0	182.0	1678.0	4692.0	5070.0
c	0	0	0	0	6369.0	3718.0	2706.0	21985.0	179.0	131.0	21963.0	236.0	101.0	10790.0	5483.0	5596.0
g	0	0	0	0	5660.0	5497.0	10792.0	102.0	238.0	21964.0	130.0	176.0	21988.0	2730.0	3754.0	6381.0
t	0	0	0	0	5018.0	4667.0	1667.0	182.0	163.0	167.0	95.0	21782.0	86.0	7159.0	8428.0	5310.0
MA0817.1_shift4 (BHLHE23) 
; oligos_8nt_mkv5_m23 versus MA0817.1 (BHLHE23); m=17/41; ncol2=12; w=12; offset=1; strand=D; shift=4; score=0.657511; ----aAmCATATGkTw
; cor=; Ncor=
a	0	0	0	0	2550.0	5005.0	2779.0	21.0	5005.0	0.0	5005.0	47.0	0.0	13.0	243.0	1523.0
c	0	0	0	0	686.0	55.0	1286.0	5005.0	0.0	4.0	5.0	115.0	4.0	1203.0	1468.0	911.0
g	0	0	0	0	858.0	890.0	932.0	0.0	67.0	1.0	3.0	5.0	5005.0	1771.0	92.0	964.0
t	0	0	0	0	912.0	44.0	8.0	0.0	17.0	5005.0	0.0	5005.0	7.0	2018.0	5005.0	1606.0
MA1638.1_shift5 (HAND2) 
; oligos_8nt_mkv5_m23 versus MA1638.1 (HAND2); m=18/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.652855; -----amCAGATGby-
; cor=; Ncor=
a	0	0	0	0	0	10136.0	8836.0	19.0	29222.0	12.0	30192.0	14.0	234.0	5217.0	6165.0	0
c	0	0	0	0	0	5564.0	11298.0	30062.0	410.0	42.0	30.0	2276.0	149.0	7690.0	10227.0	0
g	0	0	0	0	0	7463.0	6994.0	132.0	647.0	30144.0	38.0	31.0	29851.0	8878.0	6108.0	0
t	0	0	0	0	0	7120.0	3155.0	70.0	4.0	85.0	23.0	27962.0	49.0	8498.0	7783.0	0
MA0743.2_shift0 (SCRT1) 
; oligos_8nt_mkv5_m23 versus MA0743.2 (SCRT1); m=19/41; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.632957; wawkCAACAGGTGgtw
; cor=; Ncor=
a	16320.0	22932.0	17036.0	4413.0	1456.0	45606.0	57271.0	213.0	58758.0	7017.0	1664.0	883.0	7813.0	10722.0	13382.0	16484.0
c	14118.0	10314.0	8693.0	7425.0	54835.0	8751.0	370.0	59557.0	234.0	557.0	466.0	1098.0	3296.0	8788.0	14903.0	12837.0
g	14307.0	14514.0	10154.0	16396.0	1297.0	1835.0	1566.0	224.0	159.0	51330.0	56500.0	259.0	41190.0	26973.0	13470.0	11049.0
t	15464.0	12449.0	24326.0	31975.0	2621.0	4017.0	1002.0	215.0	1058.0	1305.0	1579.0	57969.0	7910.0	13726.0	18454.0	19839.0
MA0744.2_shift0 (SCRT2) 
; oligos_8nt_mkv5_m23 versus MA0744.2 (SCRT2); m=20/41; ncol2=16; w=13; offset=-3; strand=D; shift=0; score=0.628781; rrwkCAACAGGTggtw
; cor=; Ncor=
a	18855.0	23310.0	29945.0	5353.0	1378.0	53425.0	62366.0	231.0	63880.0	7306.0	1862.0	2078.0	10481.0	13383.0	16058.0	17881.0
c	13345.0	12732.0	6319.0	7236.0	59161.0	5536.0	413.0	64856.0	294.0	728.0	972.0	3475.0	5661.0	11351.0	16085.0	13846.0
g	17680.0	17497.0	12473.0	35769.0	1339.0	2265.0	1878.0	319.0	252.0	56105.0	60636.0	1168.0	38133.0	25288.0	14716.0	12430.0
t	15730.0	12071.0	16873.0	17252.0	3732.0	4384.0	953.0	204.0	1184.0	1471.0	2140.0	58889.0	11335.0	15588.0	18751.0	21453.0
MA0820.1_rc_shift5 (FIGLA_rc) 
; oligos_8nt_mkv5_m23 versus MA0820.1_rc (FIGLA_rc); m=21/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.625524; -----wmCAGGTGkw-
; cor=; Ncor=
a	0	0	0	0	0	753.0	832.0	65.0	1780.0	0.0	0.0	14.0	29.0	237.0	449.0	0
c	0	0	0	0	0	289.0	569.0	1780.0	17.0	311.0	527.0	0.0	0.0	160.0	175.0	0
g	0	0	0	0	0	283.0	225.0	33.0	0.0	1780.0	1780.0	46.0	1780.0	693.0	270.0	0
t	0	0	0	0	0	455.0	154.0	36.0	56.0	9.0	0.0	1780.0	0.0	690.0	886.0	0
MA1472.1_rc_shift5 (BHLHA15(var.2)_rc) 
; oligos_8nt_mkv5_m23 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=22/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.625102; -----rrCAGCTGbt-
; cor=; Ncor=
a	0	0	0	0	0	577.0	1015.0	0.0	1504.0	11.0	467.0	137.0	33.0	81.0	170.0	0
c	0	0	0	0	0	316.0	489.0	1504.0	0.0	72.0	1504.0	33.0	6.0	591.0	357.0	0
g	0	0	0	0	0	410.0	610.0	0.0	4.0	1504.0	30.0	33.0	1504.0	607.0	281.0	0
t	0	0	0	0	0	202.0	54.0	0.0	54.0	445.0	11.0	1504.0	47.0	897.0	697.0	0
MA0633.1_rc_shift5 (Twist2_rc) 
; oligos_8nt_mkv5_m23 versus MA0633.1_rc (Twist2_rc); m=23/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.60926; -----mACATATGky-
; cor=; Ncor=
a	0	0	0	0	0	365.0	745.0	0.0	1000.0	0.0	783.0	0.0	0.0	69.0	200.0	0
c	0	0	0	0	0	272.0	155.0	1000.0	0.0	211.0	0.0	0.0	0.0	69.0	298.0	0
g	0	0	0	0	0	181.0	50.0	0.0	0.0	0.0	217.0	0.0	1000.0	580.0	200.0	0
t	0	0	0	0	0	181.0	50.0	0.0	0.0	789.0	0.0	1000.0	0.0	282.0	302.0	0
MA1570.1_shift5 (TFAP4(var.2)) 
; oligos_8nt_mkv5_m23 versus MA1570.1 (TFAP4(var.2)); m=24/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.607124; -----ahCAyrTGkt-
; cor=; Ncor=
a	0	0	0	0	0	479.0	217.0	0.0	479.0	0.0	479.0	0.0	0.0	103.0	60.0	0
c	0	0	0	0	0	130.0	144.0	479.0	0.0	220.0	149.0	0.0	3.0	14.0	210.0	0
g	0	0	0	0	0	197.0	0.0	0.0	14.0	161.0	287.0	0.0	479.0	156.0	110.0	0
t	0	0	0	0	0	39.0	129.0	0.0	0.0	479.0	0.0	479.0	0.0	206.0	479.0	0
MA0665.1_rc_shift5 (MSC_rc) 
; oligos_8nt_mkv5_m23 versus MA0665.1_rc (MSC_rc); m=25/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.598993; -----AACAGCTGTT-
; cor=; Ncor=
a	0	0	0	0	0	69.0	69.0	4.0	69.0	0.0	0.0	0.0	1.0	0.0	7.0	0
c	0	0	0	0	0	4.0	4.0	69.0	0.0	3.0	69.0	0.0	3.0	3.0	18.0	0
g	0	0	0	0	0	9.0	10.0	0.0	0.0	69.0	12.0	0.0	69.0	12.0	0.0	0
t	0	0	0	0	0	0.0	3.0	0.0	0.0	0.0	0.0	69.0	0.0	69.0	69.0	0
MA1467.1_shift5 (ATOH1(var.2)) 
; oligos_8nt_mkv5_m23 versus MA1467.1 (ATOH1(var.2)); m=26/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.595308; -----AACAGCTGTY-
; cor=; Ncor=
a	0	0	0	0	0	1368.0	1008.0	0.0	1368.0	0.0	204.0	0.0	0.0	93.0	0.0	0
c	0	0	0	0	0	171.0	179.0	1368.0	0.0	0.0	1368.0	0.0	0.0	296.0	943.0	0
g	0	0	0	0	0	466.0	182.0	0.0	0.0	1368.0	0.0	0.0	1368.0	35.0	0.0	0
t	0	0	0	0	0	0.0	0.0	0.0	76.0	181.0	0.0	1368.0	0.0	944.0	426.0	0
MA0461.2_shift5 (Atoh1) 
; oligos_8nt_mkv5_m23 versus MA0461.2 (Atoh1); m=27/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.582845; -----rmCATATGky-
; cor=; Ncor=
a	0	0	0	0	0	655.0	523.0	42.0	1027.0	17.0	1027.0	22.0	2.0	34.0	128.0	0
c	0	0	0	0	0	108.0	334.0	1027.0	20.0	10.0	74.0	4.0	1.0	234.0	494.0	0
g	0	0	0	0	0	372.0	149.0	8.0	34.0	136.0	0.0	5.0	1027.0	376.0	126.0	0
t	0	0	0	0	0	59.0	21.0	0.0	0.0	1027.0	0.0	1027.0	31.0	384.0	533.0	0
MA0667.1_rc_shift5 (MYF6_rc) 
; oligos_8nt_mkv5_m23 versus MA0667.1_rc (MYF6_rc); m=28/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.581243; -----RACAGyTGTT-
; cor=; Ncor=
a	0	0	0	0	0	444.0	444.0	0.0	444.0	56.0	12.0	0.0	0.0	1.0	7.0	0
c	0	0	0	0	0	7.0	0.0	444.0	0.0	35.0	256.0	7.0	0.0	24.0	70.0	0
g	0	0	0	0	0	159.0	22.0	2.0	0.0	353.0	30.0	3.0	444.0	18.0	12.0	0
t	0	0	0	0	0	0.0	2.0	0.0	11.0	12.0	159.0	444.0	0.0	444.0	444.0	0
MA1559.1_shift5 (SNAI3) 
; oligos_8nt_mkv5_m23 versus MA1559.1 (SNAI3); m=29/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.579052; -----arCAGGTGya-
; cor=; Ncor=
a	0	0	0	0	0	2952.0	3917.0	23.0	6248.0	118.0	0.0	0.0	94.0	432.0	4680.0	0
c	0	0	0	0	0	661.0	0.0	6248.0	0.0	29.0	18.0	12.0	0.0	6248.0	688.0	0
g	0	0	0	0	0	1525.0	2331.0	0.0	34.0	6248.0	6248.0	28.0	6248.0	1701.0	1569.0	0
t	0	0	0	0	0	1110.0	183.0	35.0	3.0	43.0	0.0	6248.0	30.0	3161.0	553.0	0
MA0691.1_shift5 (TFAP4) 
; oligos_8nt_mkv5_m23 versus MA0691.1 (TFAP4); m=30/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.578183; -----AwCAGCTGwT-
; cor=; Ncor=
a	0	0	0	0	0	3423.0	2159.0	0.0	3423.0	2.0	21.0	1.0	0.0	1810.0	299.0	0
c	0	0	0	0	0	500.0	546.0	3423.0	2.0	85.0	3423.0	1.0	1.0	114.0	682.0	0
g	0	0	0	0	0	337.0	62.0	0.0	0.0	3423.0	49.0	0.0	3423.0	333.0	433.0	0
t	0	0	0	0	0	228.0	1264.0	0.0	0.0	14.0	6.0	3423.0	0.0	1613.0	3423.0	0
MA1468.1_shift5 (ATOH7) 
; oligos_8nt_mkv5_m23 versus MA1468.1 (ATOH7); m=31/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.574668; -----AmCATATGky-
; cor=; Ncor=
a	0	0	0	0	0	712.0	302.0	0.0	712.0	15.0	712.0	0.0	0.0	5.0	17.0	0
c	0	0	0	0	0	97.0	211.0	712.0	0.0	106.0	180.0	25.0	0.0	155.0	400.0	0
g	0	0	0	0	0	142.0	154.0	0.0	102.0	59.0	78.0	25.0	712.0	261.0	2.0	0
t	0	0	0	0	0	62.0	45.0	0.0	58.0	712.0	0.0	712.0	0.0	291.0	312.0	0
MA0816.1_rc_shift5 (Ascl2_rc) 
; oligos_8nt_mkv5_m23 versus MA0816.1_rc (Ascl2_rc); m=32/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.557699; -----rrCAGCTGyt-
; cor=; Ncor=
a	0	0	0	0	0	199.0	94.0	2.0	300.0	1.0	18.0	15.0	1.0	1.0	16.0	0
c	0	0	0	0	0	28.0	15.0	300.0	0.0	2.0	300.0	0.0	0.0	172.0	63.0	0
g	0	0	0	0	0	101.0	206.0	1.0	0.0	300.0	23.0	0.0	300.0	41.0	36.0	0
t	0	0	0	0	0	34.0	6.0	0.0	4.0	3.0	7.0	300.0	3.0	128.0	237.0	0
MA0826.1_shift5 (OLIG1) 
; oligos_8nt_mkv5_m23 versus MA0826.1 (OLIG1); m=33/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.556503; -----AmCATATGkT-
; cor=; Ncor=
a	0	0	0	0	0	11391.0	5931.0	52.0	11391.0	12.0	11391.0	195.0	0.0	12.0	490.0	0
c	0	0	0	0	0	240.0	4142.0	11391.0	1.0	15.0	80.0	175.0	0.0	2082.0	2812.0	0
g	0	0	0	0	0	1526.0	1321.0	0.0	139.0	113.0	17.0	0.0	11391.0	4568.0	257.0	0
t	0	0	0	0	0	205.0	0.0	0.0	80.0	11391.0	10.0	11391.0	74.0	4730.0	11391.0	0
MA1100.2_shift5 (ASCL1) 
; oligos_8nt_mkv5_m23 versus MA1100.2 (ASCL1); m=34/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.554233; -----rrCAGCTGcy-
; cor=; Ncor=
a	0	0	0	0	0	1267.0	1334.0	0.0	4413.0	107.0	729.0	118.0	52.0	177.0	843.0	0
c	0	0	0	0	0	926.0	521.0	4413.0	157.0	1288.0	4413.0	24.0	0.0	3065.0	1487.0	0
g	0	0	0	0	0	1495.0	3079.0	0.0	60.0	4413.0	1320.0	121.0	4413.0	814.0	889.0	0
t	0	0	0	0	0	726.0	354.0	14.0	218.0	625.0	20.0	4413.0	29.0	1349.0	1194.0	0
MA1635.1_shift5 (BHLHE22(var.2)) 
; oligos_8nt_mkv5_m23 versus MA1635.1 (BHLHE22(var.2)); m=35/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.548957; -----csCAGCTGsg-
; cor=; Ncor=
a	0	0	0	0	0	3886.0	4453.0	0.0	18267.0	1.0	14.0	0.0	14.0	1526.0	4398.0	0
c	0	0	0	0	0	5621.0	5110.0	18331.0	37.0	53.0	18288.0	52.0	15.0	7269.0	4447.0	0
g	0	0	0	0	0	4447.0	7267.0	11.0	52.0	18288.0	53.0	37.0	18327.0	5112.0	5625.0	0
t	0	0	0	0	0	4402.0	1526.0	14.0	0.0	14.0	1.0	18267.0	0.0	4449.0	3886.0	0
MA0100.3_rc_shift5 (MYB_rc) 
; oligos_8nt_mkv5_m23 versus MA0100.3_rc (MYB_rc); m=36/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.543636; -----kdCAGTTGvk-
; cor=; Ncor=
a	0	0	0	0	0	352.0	497.0	0.0	1398.0	0.0	6.0	7.0	9.0	410.0	380.0	0
c	0	0	0	0	0	225.0	147.0	1516.0	68.0	0.0	0.0	39.0	5.0	397.0	300.0	0
g	0	0	0	0	0	528.0	482.0	3.0	60.0	1527.0	2.0	3.0	1513.0	428.0	422.0	0
t	0	0	0	0	0	422.0	401.0	8.0	1.0	0.0	1519.0	1478.0	0.0	292.0	425.0	0
MA0669.1_shift5 (NEUROG2) 
; oligos_8nt_mkv5_m23 versus MA0669.1 (NEUROG2); m=37/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.542958; -----raCATATGtY-
; cor=; Ncor=
a	0	0	0	0	0	246.0	426.0	1.0	426.0	4.0	426.0	5.0	0.0	3.0	0.0	0
c	0	0	0	0	0	2.0	150.0	426.0	0.0	5.0	8.0	3.0	0.0	170.0	307.0	0
g	0	0	0	0	0	180.0	65.0	0.0	3.0	20.0	5.0	0.0	426.0	147.0	0.0	0
t	0	0	0	0	0	0.0	0.0	5.0	0.0	426.0	0.0	426.0	0.0	426.0	119.0	0
MA1558.1_shift5 (SNAI1) 
; oligos_8nt_mkv5_m23 versus MA1558.1 (SNAI1); m=38/41; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.542685; -----drCAGGTGyr-
; cor=; Ncor=
a	0	0	0	0	0	5274.0	6993.0	446.0	19982.0	1766.0	72.0	38.0	706.0	1639.0	10088.0	0
c	0	0	0	0	0	3187.0	501.0	19982.0	297.0	517.0	5.0	0.0	0.0	10938.0	4592.0	0
g	0	0	0	0	0	6410.0	12989.0	275.0	91.0	19982.0	19982.0	42.0	19982.0	5306.0	9894.0	0
t	0	0	0	0	0	5112.0	3518.0	340.0	568.0	306.0	28.0	19982.0	311.0	9044.0	6356.0	0
MA0827.1_rc_shift5 (OLIG3_rc) 
; oligos_8nt_mkv5_m23 versus MA0827.1_rc (OLIG3_rc); m=39/41; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.541352; -----rvCATATGkT-
; cor=; Ncor=
a	0	0	0	0	0	1915.0	1010.0	275.0	1915.0	0.0	1915.0	22.0	3.0	6.0	132.0	0
c	0	0	0	0	0	176.0	904.0	1915.0	2.0	11.0	72.0	99.0	0.0	208.0	427.0	0
g	0	0	0	0	0	964.0	662.0	4.0	224.0	103.0	26.0	10.0	1915.0	1115.0	204.0	0
t	0	0	0	0	0	265.0	28.0	4.0	56.0	1915.0	0.0	1915.0	222.0	800.0	1915.0	0
MA0607.1_rc_shift6 (Bhlha15_rc) 
; oligos_8nt_mkv5_m23 versus MA0607.1_rc (Bhlha15_rc); m=40/41; ncol2=8; w=8; offset=3; strand=R; shift=6; score=0.513104; ------aCATATGs--
; cor=; Ncor=
a	0	0	0	0	0	0	614.0	0.0	999.0	0.0	799.0	0.0	0.0	1.0	0	0
c	0	0	0	0	0	0	154.0	999.0	0.0	0.0	200.0	0.0	0.0	286.0	0	0
g	0	0	0	0	0	0	231.0	0.0	0.0	200.0	0.0	0.0	999.0	571.0	0	0
t	0	0	0	0	0	0	1.0	0.0	0.0	799.0	0.0	999.0	0.0	143.0	0	0
MA1647.1_rc_shift1 (PRDM4_rc) 
; oligos_8nt_mkv5_m23 versus MA1647.1_rc (PRDM4_rc); m=41/41; ncol2=11; w=9; offset=-2; strand=R; shift=1; score=0.453658; -twGAAACAGhy----
; cor=; Ncor=
a	0	1799.0	2962.0	292.0	6811.0	6288.0	6889.0	39.0	5543.0	154.0	2123.0	1559.0	0	0	0	0
c	0	1344.0	726.0	129.0	111.0	393.0	82.0	6813.0	566.0	316.0	2079.0	2553.0	0	0	0	0
g	0	1532.0	1456.0	6353.0	138.0	405.0	137.0	110.0	286.0	6504.0	1012.0	1163.0	0	0	0	0
t	0	2580.0	2111.0	481.0	195.0	169.0	147.0	293.0	860.0	281.0	2041.0	1980.0	0	0	0	0