One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m31/peak-motifs_oligos_8nt_mkv5_m31.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m31/peak-motifs_oligos_8nt_mkv5_m31_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv5_m31_shift3 ; 84 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_8nt_mkv5_m31_shift3 (oligos_8nt_mkv5_m31oligos_8nt_mkv5_m31)
; oligos_8nt_mkv5_m31 (oligos_8nt_mkv5_m31oligos_8nt_mkv5_m31); m=0 (reference); ncol1=12; shift=3; ncol=19; ---wsATTAGTCAbs---- ; Alignment reference a 0 0 0 45 32 141 4 1 158 4 3 0 167 18 31 0 0 0 0 c 0 0 0 36 58 14 6 8 1 9 11 168 4 58 64 0 0 0 0 g 0 0 0 43 44 11 3 37 1 155 5 5 0 48 47 0 0 0 0 t 0 0 0 49 39 7 160 127 13 5 154 0 2 49 31 0 0 0 0

MA1130.1_shift3 (FOSL2::JUN)
; oligos_8nt_mkv5_m31 versus MA1130.1 (FOSL2::JUN); m=1/83; ncol2=12; w=12; offset=0; strand=D; shift=3; score=0.87323; ---kkrTGAGTCAym---- ; cor=; Ncor= a 0 0 0 189.0 214.0 542.0 1.0 1.0 847.0 103.0 1.0 20.0 998.0 19.0 269.0 0 0 0 0 c 0 0 0 248.0 179.0 121.0 1.0 1.0 123.0 141.0 1.0 979.0 0.0 299.0 341.0 0 0 0 0 g 0 0 0 295.0 338.0 282.0 1.0 840.0 1.0 698.0 1.0 1.0 1.0 93.0 180.0 0 0 0 0 t 0 0 0 268.0 269.0 55.0 998.0 158.0 29.0 58.0 998.0 1.0 1.0 589.0 209.0 0 0 0 0

MA1137.1_rc_shift3 (FOSL1::JUNB_rc)
; oligos_8nt_mkv5_m31 versus MA1137.1_rc (FOSL1::JUNB_rc); m=2/83; ncol2=13; w=12; offset=0; strand=R; shift=3; score=0.830741; ---gkaTKAgTCAymr--- ; cor=; Ncor= a 0 0 0 230.0 198.0 552.0 37.0 37.0 803.0 113.0 42.0 63.0 945.0 47.0 263.0 300.0 0 0 0 c 0 0 0 223.0 204.0 170.0 38.0 9.0 115.0 198.0 21.0 880.0 16.0 287.0 376.0 195.0 0 0 0 g 0 0 0 300.0 298.0 225.0 21.0 683.0 23.0 626.0 20.0 21.0 16.0 100.0 146.0 269.0 0 0 0 t 0 0 0 247.0 300.0 53.0 904.0 271.0 59.0 63.0 917.0 36.0 23.0 566.0 216.0 237.0 0 0 0

MA1128.1_rc_shift3 (FOSL1::JUN_rc)
; oligos_8nt_mkv5_m31 versus MA1128.1_rc (FOSL1::JUN_rc); m=3/83; ncol2=13; w=12; offset=0; strand=R; shift=3; score=0.813919; ---kkaTGAGTCAymm--- ; cor=; Ncor= a 0 0 0 196.0 223.0 579.0 4.0 4.0 826.0 97.0 3.0 38.0 996.0 26.0 289.0 293.0 0 0 0 c 0 0 0 237.0 173.0 119.0 9.0 2.0 140.0 51.0 2.0 957.0 1.0 283.0 380.0 253.0 0 0 0 g 0 0 0 289.0 308.0 245.0 4.0 835.0 2.0 826.0 2.0 2.0 2.0 89.0 159.0 246.0 0 0 0 t 0 0 0 277.0 296.0 57.0 984.0 159.0 33.0 26.0 994.0 3.0 1.0 602.0 172.0 208.0 0 0 0

MA1141.1_shift3 (FOS::JUND)
; oligos_8nt_mkv5_m31 versus MA1141.1 (FOS::JUND); m=4/83; ncol2=13; w=12; offset=0; strand=D; shift=3; score=0.811194; ---kkrTGAGTCAymv--- ; cor=; Ncor= a 0 0 0 183.0 182.0 593.0 0.0 0.0 894.0 75.0 0.0 29.0 999.0 21.0 250.0 264.0 0 0 0 c 0 0 0 244.0 167.0 104.0 1.0 0.0 91.0 40.0 0.0 970.0 0.0 290.0 370.0 264.0 0 0 0 g 0 0 0 315.0 389.0 266.0 0.0 871.0 0.0 867.0 0.0 0.0 0.0 77.0 195.0 292.0 0 0 0 t 0 0 0 258.0 263.0 38.0 999.0 129.0 15.0 19.0 999.0 0.0 0.0 612.0 185.0 180.0 0 0 0

MA0477.2_rc_shift3 (FOSL1_rc)
; oligos_8nt_mkv5_m31 versus MA0477.2_rc (FOSL1_rc); m=5/83; ncol2=13; w=12; offset=0; strand=R; shift=3; score=0.798956; ---rdaTGAGTCAtyh--- ; cor=; Ncor= a 0 0 0 15023.0 15056.0 38033.0 363.0 559.0 55860.0 2591.0 302.0 2246.0 56778.0 2795.0 13887.0 15363.0 0 0 0 c 0 0 0 11065.0 12314.0 6533.0 566.0 278.0 598.0 8615.0 286.0 54619.0 183.0 13127.0 16855.0 14848.0 0 0 0 g 0 0 0 17637.0 15640.0 10399.0 344.0 53711.0 163.0 43918.0 287.0 301.0 460.0 6703.0 11018.0 12491.0 0 0 0 t 0 0 0 13956.0 14671.0 2716.0 56408.0 3133.0 1060.0 2557.0 56806.0 515.0 260.0 35056.0 15921.0 14979.0 0 0 0

MA0491.2_rc_shift3 (JUND_rc)
; oligos_8nt_mkv5_m31 versus MA0491.2_rc (JUND_rc); m=6/83; ncol2=13; w=12; offset=0; strand=R; shift=3; score=0.796199; ---ddATGAGTCAtyw--- ; cor=; Ncor= a 0 0 0 28704.0 27477.0 83216.0 809.0 1449.0 102249.0 4650.0 925.0 3920.0 104101.0 5020.0 25652.0 30507.0 0 0 0 c 0 0 0 19236.0 22249.0 7908.0 965.0 953.0 1147.0 20633.0 573.0 99787.0 443.0 20586.0 31347.0 25006.0 0 0 0 g 0 0 0 29793.0 28250.0 12025.0 751.0 98628.0 496.0 76028.0 650.0 873.0 757.0 10173.0 19712.0 21965.0 0 0 0 t 0 0 0 28212.0 27969.0 2796.0 103420.0 4915.0 2053.0 4634.0 103797.0 1365.0 644.0 70166.0 29234.0 28467.0 0 0 0

MA0490.2_rc_shift3 (JUNB_rc)
; oligos_8nt_mkv5_m31 versus MA0490.2_rc (JUNB_rc); m=7/83; ncol2=13; w=12; offset=0; strand=R; shift=3; score=0.795312; ---dwATGAGTCAThw--- ; cor=; Ncor= a 0 0 0 22998.0 22591.0 59750.0 693.0 797.0 76655.0 4798.0 682.0 3779.0 78342.0 3866.0 20085.0 22351.0 0 0 0 c 0 0 0 15068.0 16491.0 7508.0 900.0 617.0 913.0 10519.0 550.0 74757.0 322.0 11566.0 20403.0 18150.0 0 0 0 g 0 0 0 20653.0 19230.0 8876.0 588.0 73199.0 289.0 59784.0 523.0 550.0 654.0 7817.0 15807.0 16583.0 0 0 0 t 0 0 0 21137.0 21544.0 3722.0 77675.0 5243.0 1999.0 4755.0 78101.0 770.0 538.0 56607.0 23561.0 22772.0 0 0 0

MA0462.2_rc_shift4 (BATF::JUN_rc)
; oligos_8nt_mkv5_m31 versus MA0462.2_rc (BATF::JUN_rc); m=8/83; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.78903; ----daTGAGTCAtw---- ; cor=; Ncor= a 0 0 0 0 10156.0 18005.0 558.0 907.0 36619.0 1399.0 320.0 3785.0 37330.0 5376.0 13310.0 0 0 0 0 c 0 0 0 0 4923.0 7745.0 424.0 522.0 539.0 4188.0 350.0 33135.0 182.0 6729.0 9317.0 0 0 0 0 g 0 0 0 0 9668.0 6105.0 318.0 32770.0 241.0 31168.0 204.0 400.0 275.0 7260.0 4762.0 0 0 0 0 t 0 0 0 0 13407.0 6299.0 36854.0 3955.0 755.0 1399.0 37280.0 834.0 367.0 18789.0 10765.0 0 0 0 0

MA1634.1_rc_shift4 (BATF_rc)
; oligos_8nt_mkv5_m31 versus MA1634.1_rc (BATF_rc); m=9/83; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.786636; ----daTGAGTCAtw---- ; cor=; Ncor= a 0 0 0 0 12902.0 21615.0 754.0 1276.0 44736.0 2051.0 471.0 4682.0 45887.0 6875.0 16219.0 0 0 0 0 c 0 0 0 0 5919.0 9681.0 507.0 711.0 836.0 5573.0 341.0 40617.0 283.0 8627.0 11492.0 0 0 0 0 g 0 0 0 0 12048.0 7566.0 431.0 40279.0 306.0 37333.0 250.0 570.0 355.0 8931.0 5742.0 0 0 0 0 t 0 0 0 0 16139.0 8146.0 45316.0 4742.0 1130.0 2051.0 45946.0 1139.0 483.0 22575.0 13555.0 0 0 0 0

MA0835.2_rc_shift4 (BATF3_rc)
; oligos_8nt_mkv5_m31 versus MA0835.2_rc (BATF3_rc); m=10/83; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.784557; ----waTGAGTCAtw---- ; cor=; Ncor= a 0 0 0 0 3456.0 5718.0 235.0 282.0 11502.0 408.0 116.0 1238.0 11737.0 1891.0 4503.0 0 0 0 0 c 0 0 0 0 1255.0 2249.0 117.0 88.0 117.0 560.0 87.0 10420.0 37.0 1831.0 2608.0 0 0 0 0 g 0 0 0 0 2733.0 1664.0 84.0 10347.0 79.0 10589.0 92.0 62.0 59.0 2106.0 1245.0 0 0 0 0 t 0 0 0 0 4521.0 2334.0 11529.0 1248.0 267.0 408.0 11670.0 245.0 132.0 6137.0 3609.0 0 0 0 0

MA1134.1_rc_shift3 (FOS::JUNB_rc)
; oligos_8nt_mkv5_m31 versus MA1134.1_rc (FOS::JUNB_rc); m=11/83; ncol2=12; w=12; offset=0; strand=R; shift=3; score=0.778047; ---bkrTGAsTCAym---- ; cor=; Ncor= a 0 0 0 156.0 184.0 658.0 1.0 1.0 996.0 25.0 4.0 131.0 998.0 36.0 286.0 0 0 0 0 c 0 0 0 256.0 178.0 51.0 1.0 1.0 3.0 618.0 1.0 868.0 1.0 267.0 372.0 0 0 0 0 g 0 0 0 304.0 363.0 284.0 1.0 971.0 1.0 309.0 30.0 1.0 1.0 105.0 168.0 0 0 0 0 t 0 0 0 283.0 275.0 7.0 998.0 27.0 1.0 48.0 965.0 1.0 1.0 593.0 174.0 0 0 0 0

MA0476.1_rc_shift4 (FOS_rc)
; oligos_8nt_mkv5_m31 versus MA0476.1_rc (FOS_rc); m=12/83; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.756134; ----vATGAsTCAbh---- ; cor=; Ncor= a 0 0 0 0 9257.0 21777.0 0.0 0.0 29396.0 3113.0 0.0 2288.0 29396.0 903.0 11119.0 0 0 0 0 c 0 0 0 0 7897.0 1538.0 0.0 0.0 0.0 11206.0 0.0 27108.0 0.0 10841.0 9686.0 0 0 0 0 g 0 0 0 0 8236.0 5823.0 0.0 29396.0 0.0 14079.0 0.0 0.0 0.0 10177.0 712.0 0 0 0 0 t 0 0 0 0 4006.0 258.0 29396.0 0.0 0.0 998.0 29396.0 0.0 0.0 7475.0 7879.0 0 0 0 0

MA0841.1_rc_shift4 (NFE2_rc)
; oligos_8nt_mkv5_m31 versus MA0841.1_rc (NFE2_rc); m=13/83; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.753627; ----sATGAGTCATb---- ; cor=; Ncor= a 0 0 0 0 3417.0 18831.0 5.0 3.0 18831.0 17.0 4.0 2.0 18831.0 5.0 731.0 0 0 0 0 c 0 0 0 0 5067.0 10.0 8.0 0.0 3.0 4472.0 0.0 18831.0 0.0 1306.0 5303.0 0 0 0 0 g 0 0 0 0 9860.0 2689.0 13.0 18831.0 20.0 14360.0 11.0 0.0 8.0 9.0 7208.0 0 0 0 0 t 0 0 0 0 487.0 0.0 18831.0 1.0 0.0 37.0 18831.0 0.0 2.0 18831.0 5589.0 0 0 0 0

MA1622.1_rc_shift3 (Smad2::Smad3_rc)
; oligos_8nt_mkv5_m31 versus MA1622.1_rc (Smad2::Smad3_rc); m=14/83; ncol2=14; w=12; offset=0; strand=R; shift=3; score=0.744927; ---kwaTGAGTCAymay-- ; cor=; Ncor= a 0 0 0 2480.0 2764.0 5636.0 125.0 101.0 9977.0 696.0 102.0 405.0 10151.0 794.0 2725.0 2998.0 2481.0 0 0 c 0 0 0 2524.0 2154.0 1979.0 79.0 90.0 68.0 1542.0 58.0 9768.0 56.0 2888.0 3479.0 2324.0 2615.0 0 0 g 0 0 0 2595.0 2479.0 2047.0 85.0 9443.0 53.0 7480.0 44.0 82.0 59.0 2212.0 1642.0 2515.0 2254.0 0 0 t 0 0 0 2746.0 2948.0 683.0 10056.0 711.0 247.0 627.0 10141.0 90.0 79.0 4451.0 2499.0 2508.0 2995.0 0 0

MA1142.1_rc_shift5 (FOSL1::JUND_rc)
; oligos_8nt_mkv5_m31 versus MA1142.1_rc (FOSL1::JUND_rc); m=15/83; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.738955; -----aTkagTCAyy---- ; cor=; Ncor= a 0 0 0 0 0 470.0 31.0 64.0 669.0 180.0 41.0 140.0 913.0 40.0 235.0 0 0 0 0 c 0 0 0 0 0 144.0 17.0 25.0 187.0 191.0 82.0 777.0 34.0 282.0 279.0 0 0 0 0 g 0 0 0 0 0 212.0 40.0 641.0 45.0 581.0 12.0 61.0 23.0 127.0 221.0 0 0 0 0 t 0 0 0 0 0 174.0 912.0 270.0 98.0 49.0 864.0 22.0 30.0 551.0 265.0 0 0 0 0

MA0099.3_shift5 (FOS::JUN)
; oligos_8nt_mkv5_m31 versus MA0099.3 (FOS::JUN); m=16/83; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.736486; -----rTGAGTCAym---- ; cor=; Ncor= a 0 0 0 0 0 592.0 3.0 7.0 820.0 78.0 5.0 30.0 992.0 24.0 277.0 0 0 0 0 c 0 0 0 0 0 111.0 5.0 1.0 131.0 180.0 2.0 963.0 2.0 313.0 397.0 0 0 0 0 g 0 0 0 0 0 257.0 2.0 824.0 4.0 688.0 2.0 3.0 2.0 95.0 164.0 0 0 0 0 t 0 0 0 0 0 40.0 990.0 168.0 45.0 54.0 991.0 4.0 4.0 568.0 162.0 0 0 0 0

MA1135.1_rc_shift5 (FOSB::JUNB_rc)
; oligos_8nt_mkv5_m31 versus MA1135.1_rc (FOSB::JUNB_rc); m=17/83; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.732458; -----rTGAsTCAym---- ; cor=; Ncor= a 0 0 0 0 0 578.0 1.0 1.0 958.0 61.0 1.0 19.0 998.0 20.0 270.0 0 0 0 0 c 0 0 0 0 0 126.0 1.0 1.0 39.0 309.0 1.0 980.0 1.0 321.0 429.0 0 0 0 0 g 0 0 0 0 0 259.0 0.0 808.0 1.0 596.0 1.0 0.0 0.0 61.0 182.0 0 0 0 0 t 0 0 0 0 0 37.0 998.0 191.0 2.0 34.0 997.0 1.0 1.0 598.0 119.0 0 0 0 0

MA1138.1_rc_shift5 (FOSL2::JUNB_rc)
; oligos_8nt_mkv5_m31 versus MA1138.1_rc (FOSL2::JUNB_rc); m=18/83; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.726824; -----rTGAsTCAym---- ; cor=; Ncor= a 0 0 0 0 0 602.0 0.0 0.0 973.0 85.0 0.0 14.0 999.0 13.0 277.0 0 0 0 0 c 0 0 0 0 0 112.0 0.0 0.0 26.0 292.0 0.0 985.0 0.0 314.0 407.0 0 0 0 0 g 0 0 0 0 0 251.0 0.0 831.0 0.0 568.0 0.0 0.0 0.0 53.0 164.0 0 0 0 0 t 0 0 0 0 0 35.0 999.0 168.0 1.0 54.0 999.0 0.0 0.0 621.0 151.0 0 0 0 0

MA1144.1_rc_shift5 (FOSL2::JUND_rc)
; oligos_8nt_mkv5_m31 versus MA1144.1_rc (FOSL2::JUND_rc); m=19/83; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.720498; -----rTGAsTCAym---- ; cor=; Ncor= a 0 0 0 0 0 583.0 0.0 0.0 934.0 58.0 0.0 10.0 999.0 14.0 275.0 0 0 0 0 c 0 0 0 0 0 113.0 0.0 0.0 60.0 292.0 0.0 990.0 0.0 291.0 446.0 0 0 0 0 g 0 0 0 0 0 266.0 0.0 860.0 0.0 604.0 1.0 0.0 0.0 60.0 143.0 0 0 0 0 t 0 0 0 0 0 38.0 999.0 140.0 6.0 46.0 998.0 0.0 0.0 634.0 137.0 0 0 0 0

MA1132.1_rc_shift5 (JUN::JUNB_rc)
; oligos_8nt_mkv5_m31 versus MA1132.1_rc (JUN::JUNB_rc); m=20/83; ncol2=10; w=10; offset=2; strand=R; shift=5; score=0.715628; -----aTGmGTCAtm---- ; cor=; Ncor= a 0 0 0 0 0 500.0 27.0 122.0 565.0 33.0 18.0 47.0 946.0 50.0 261.0 0 0 0 0 c 0 0 0 0 0 64.0 18.0 10.0 353.0 115.0 28.0 921.0 34.0 189.0 408.0 0 0 0 0 g 0 0 0 0 0 248.0 24.0 707.0 24.0 826.0 10.0 21.0 10.0 134.0 128.0 0 0 0 0 t 0 0 0 0 0 188.0 931.0 161.0 58.0 27.0 944.0 10.0 11.0 627.0 203.0 0 0 0 0

MA0478.1_shift3 (FOSL2)
; oligos_8nt_mkv5_m31 versus MA0478.1 (FOSL2); m=21/83; ncol2=11; w=11; offset=0; strand=D; shift=3; score=0.701905; ---krrTGAsTCAb----- ; cor=; Ncor= a 0 0 0 833.0 1525.0 2861.0 0.0 0.0 5075.0 0.0 0.0 205.0 5318.0 0.0 0 0 0 0 0 c 0 0 0 994.0 592.0 55.0 0.0 0.0 51.0 3286.0 0.0 5113.0 0.0 1399.0 0 0 0 0 0 g 0 0 0 2086.0 2707.0 2328.0 0.0 5318.0 192.0 1838.0 0.0 0.0 0.0 1933.0 0 0 0 0 0 t 0 0 0 1405.0 494.0 74.0 5318.0 0.0 0.0 194.0 5318.0 0.0 0.0 1986.0 0 0 0 0 0

MA1633.1_rc_shift2 (BACH1_rc)
; oligos_8nt_mkv5_m31 versus MA1633.1_rc (BACH1_rc); m=22/83; ncol2=13; w=12; offset=-1; strand=R; shift=2; score=0.671389; --wtGCTGAGTCAts---- ; cor=; Ncor= a 0 0 3938.0 2620.0 548.0 1545.0 275.0 240.0 14421.0 434.0 114.0 480.0 15036.0 947.0 3519.0 0 0 0 0 c 0 0 3553.0 1971.0 858.0 13050.0 310.0 178.0 266.0 2083.0 167.0 14831.0 149.0 3848.0 4835.0 0 0 0 0 g 0 0 3574.0 2167.0 13382.0 623.0 194.0 14563.0 220.0 12597.0 230.0 149.0 267.0 3833.0 3946.0 0 0 0 0 t 0 0 4492.0 8799.0 769.0 339.0 14778.0 576.0 650.0 443.0 15046.0 97.0 105.0 6929.0 3257.0 0 0 0 0

MA1639.1_shift2 (MEIS1(var.2))
; oligos_8nt_mkv5_m31 versus MA1639.1 (MEIS1(var.2)); m=23/83; ncol2=13; w=12; offset=-1; strand=D; shift=2; score=0.649229; --rhcATmAATCAww---- ; cor=; Ncor= a 0 0 1824.0 1864.0 970.0 6383.0 80.0 2295.0 6063.0 6112.0 127.0 156.0 5433.0 1735.0 1872.0 0 0 0 0 c 0 0 1425.0 1979.0 4571.0 61.0 69.0 3580.0 336.0 214.0 87.0 6367.0 279.0 1504.0 1542.0 0 0 0 0 g 0 0 1902.0 762.0 183.0 218.0 83.0 252.0 33.0 192.0 63.0 61.0 152.0 934.0 1261.0 0 0 0 0 t 0 0 1585.0 2131.0 1012.0 74.0 6504.0 609.0 304.0 218.0 6459.0 152.0 872.0 2563.0 2061.0 0 0 0 0

MA0655.1_rc_shift5 (JDP2_rc)
; oligos_8nt_mkv5_m31 versus MA0655.1_rc (JDP2_rc); m=24/83; ncol2=9; w=9; offset=2; strand=R; shift=5; score=0.623288; -----ATGASTCAT----- ; cor=; Ncor= a 0 0 0 0 0 1634.0 7.0 9.0 1634.0 13.0 25.0 22.0 1634.0 8.0 0 0 0 0 0 c 0 0 0 0 0 5.0 0.0 3.0 6.0 434.0 2.0 1634.0 1.0 140.0 0 0 0 0 0 g 0 0 0 0 0 404.0 0.0 1634.0 0.0 1200.0 1.0 3.0 6.0 19.0 0 0 0 0 0 t 0 0 0 0 0 22.0 1634.0 22.0 6.0 14.0 1634.0 0.0 5.0 1634.0 0 0 0 0 0

MA0489.1_shift0 (JUN(var.2))
; oligos_8nt_mkv5_m31 versus MA0489.1 (JUN(var.2)); m=25/83; ncol2=14; w=11; offset=-3; strand=D; shift=0; score=0.568594; rrrrrrTGAsTCAt----- ; cor=; Ncor= a 4852.0 3927.0 3726.0 4396.0 4146.0 5930.0 0.0 0.0 10953.0 382.0 199.0 956.0 10956.0 376.0 0 0 0 0 0 c 1250.0 1324.0 1127.0 1122.0 593.0 993.0 0.0 0.0 0.0 5704.0 0.0 10000.0 0.0 2509.0 0 0 0 0 0 g 2818.0 4110.0 4330.0 3461.0 4213.0 4033.0 0.0 10956.0 0.0 4090.0 0.0 0.0 0.0 2645.0 0 0 0 0 0 t 2036.0 1595.0 1773.0 1977.0 2004.0 0.0 10956.0 0.0 3.0 780.0 10757.0 0.0 0.0 5426.0 0 0 0 0 0

MA0496.3_rc_shift1 (MAFK_rc)
; oligos_8nt_mkv5_m31 versus MA0496.3_rc (MAFK_rc); m=26/83; ncol2=15; w=12; offset=-2; strand=R; shift=1; score=0.566869; -wwkGCTGAGTCAkca--- ; cor=; Ncor= a 0 18619.0 14552.0 8204.0 2285.0 4361.0 1910.0 1087.0 46798.0 2544.0 1274.0 2565.0 47492.0 3939.0 9573.0 19030.0 0 0 0 c 0 8541.0 10512.0 4590.0 3327.0 44013.0 1267.0 957.0 1081.0 7573.0 1306.0 46695.0 1058.0 6706.0 21904.0 9969.0 0 0 0 g 0 9756.0 10737.0 14138.0 43458.0 1921.0 882.0 47872.0 1133.0 39125.0 1670.0 1366.0 1568.0 27000.0 10655.0 10789.0 0 0 0 t 0 14818.0 15933.0 24802.0 2664.0 1439.0 47675.0 1818.0 2722.0 2492.0 47484.0 1108.0 1616.0 14089.0 9602.0 11946.0 0 0 0

MA1101.2_rc_shift0 (BACH2_rc)
; oligos_8nt_mkv5_m31 versus MA1101.2_rc (BACH2_rc); m=27/83; ncol2=19; w=12; offset=-3; strand=R; shift=0; score=0.501252; awabsATGAsTCATGstwt ; cor=; Ncor= a 26118.0 39012.0 54749.0 11783.0 5274.0 63746.0 0.0 3.0 67975.0 18.0 6.0 54.0 68266.0 0.0 8116.0 13391.0 15405.0 24469.0 15601.0 c 11268.0 8221.0 7650.0 19155.0 30498.0 2028.0 11.0 0.0 856.0 30785.0 13.0 68240.0 1.0 15304.0 6727.0 21257.0 8490.0 9605.0 13720.0 g 15623.0 10703.0 13438.0 17682.0 35220.0 11634.0 2.0 68215.0 20.0 37438.0 1088.0 0.0 7.0 260.0 61580.0 21218.0 5534.0 8823.0 12203.0 t 15261.0 23586.0 18457.0 19650.0 4522.0 47.0 68264.0 115.0 3.0 50.0 67846.0 6.0 1.0 62993.0 9369.0 12404.0 59307.0 38327.0 26746.0

MA0912.2_rc_shift2 (HOXD3_rc)
; oligos_8nt_mkv5_m31 versus MA0912.2_rc (HOXD3_rc); m=28/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.460557; --gTAATTAG--------- ; cor=; Ncor= a 0 0 1674.0 0.0 14562.0 14562.0 0.0 0.0 14562.0 2947.0 0 0 0 0 0 0 0 0 0 c 0 0 3187.0 2198.0 4453.0 0.0 0.0 0.0 0.0 827.0 0 0 0 0 0 0 0 0 0 g 0 0 8987.0 0.0 0.0 0.0 0.0 742.0 94.0 11615.0 0 0 0 0 0 0 0 0 0 t 0 0 714.0 14562.0 0.0 0.0 14562.0 14562.0 0.0 276.0 0 0 0 0 0 0 0 0 0

MA0902.2_shift2 (HOXB2)
; oligos_8nt_mkv5_m31 versus MA0902.2 (HOXB2); m=29/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.452235; --symATTAs--------- ; cor=; Ncor= a 0 0 807.0 51.0 6827.0 6827.0 0.0 0.0 6827.0 1273.0 0 0 0 0 0 0 0 0 0 c 0 0 2038.0 2834.0 3276.0 0.0 0.0 0.0 0.0 2031.0 0 0 0 0 0 0 0 0 0 g 0 0 2925.0 0.0 199.0 0.0 0.0 1876.0 0.0 2933.0 0 0 0 0 0 0 0 0 0 t 0 0 1056.0 3993.0 0.0 0.0 6827.0 6827.0 0.0 589.0 0 0 0 0 0 0 0 0 0

MA0893.2_shift2 (GSX2)
; oligos_8nt_mkv5_m31 versus MA0893.2 (GSX2); m=30/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.449925; --symATTAr--------- ; cor=; Ncor= a 0 0 816.0 503.0 2775.0 4998.0 0.0 0.0 4998.0 2158.0 0 0 0 0 0 0 0 0 0 c 0 0 2277.0 2611.0 2223.0 0.0 121.0 0.0 0.0 659.0 0 0 0 0 0 0 0 0 0 g 0 0 2721.0 400.0 95.0 708.0 0.0 77.0 1005.0 2840.0 0 0 0 0 0 0 0 0 0 t 0 0 0.0 4998.0 29.0 0.0 4998.0 4998.0 20.0 918.0 0 0 0 0 0 0 0 0 0

MA0875.1_shift2 (BARX1)
; oligos_8nt_mkv5_m31 versus MA0875.1 (BARX1); m=31/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.449466; --vcmATTAr--------- ; cor=; Ncor= a 0 0 1872.0 590.0 3339.0 6805.0 0.0 0.0 6805.0 1917.0 0 0 0 0 0 0 0 0 0 c 0 0 1821.0 5138.0 1992.0 207.0 0.0 0.0 0.0 1391.0 0 0 0 0 0 0 0 0 0 g 0 0 2236.0 246.0 1386.0 192.0 0.0 0.0 0.0 2420.0 0 0 0 0 0 0 0 0 0 t 0 0 877.0 1667.0 87.0 0.0 6805.0 6805.0 0.0 1077.0 0 0 0 0 0 0 0 0 0

MA0132.2_shift2 (PDX1)
; oligos_8nt_mkv5_m31 versus MA0132.2 (PDX1); m=32/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.448655; --symATTAr--------- ; cor=; Ncor= a 0 0 1483.0 292.0 4839.0 7130.0 0.0 0.0 7130.0 2181.0 0 0 0 0 0 0 0 0 0 c 0 0 2206.0 2469.0 2291.0 45.0 0.0 0.0 0.0 1216.0 0 0 0 0 0 0 0 0 0 g 0 0 2441.0 0.0 185.0 0.0 0.0 0.0 0.0 2881.0 0 0 0 0 0 0 0 0 0 t 0 0 999.0 4661.0 78.0 0.0 7130.0 7130.0 0.0 852.0 0 0 0 0 0 0 0 0 0

MA1499.1_shift2 (HOXB4)
; oligos_8nt_mkv5_m31 versus MA1499.1 (HOXB4); m=33/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.444032; --rTmATTAr--------- ; cor=; Ncor= a 0 0 4683.0 0.0 3621.0 9080.0 0.0 0.0 9080.0 4397.0 0 0 0 0 0 0 0 0 0 c 0 0 1377.0 2103.0 5459.0 0.0 0.0 0.0 0.0 1409.0 0 0 0 0 0 0 0 0 0 g 0 0 4397.0 0.0 0.0 265.0 0.0 271.0 55.0 4683.0 0 0 0 0 0 0 0 0 0 t 0 0 1021.0 9080.0 0.0 0.0 9080.0 9080.0 0.0 1388.0 0 0 0 0 0 0 0 0 0

MA0067.1_shift8 (Pax2)
; oligos_8nt_mkv5_m31 versus MA0067.1 (Pax2); m=34/83; ncol2=8; w=7; offset=5; strand=D; shift=8; score=0.443909; --------wgTCAykb--- ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10.0 7.0 3.0 0.0 26.0 2.0 2.0 1.0 0 0 0 c 0 0 0 0 0 0 0 0 7.0 1.0 2.0 28.0 1.0 17.0 0.0 11.0 0 0 0 g 0 0 0 0 0 0 0 0 5.0 21.0 0.0 1.0 3.0 1.0 19.0 11.0 0 0 0 t 0 0 0 0 0 0 0 0 9.0 2.0 26.0 2.0 1.0 11.0 10.0 8.0 0 0 0

MA0876.1_shift2 (BSX)
; oligos_8nt_mkv5_m31 versus MA0876.1 (BSX); m=35/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.44132; --symATTAv--------- ; cor=; Ncor= a 0 0 1449.0 688.0 4036.0 8832.0 0.0 96.0 8832.0 2770.0 0 0 0 0 0 0 0 0 0 c 0 0 3929.0 5585.0 2483.0 194.0 0.0 0.0 0.0 2369.0 0 0 0 0 0 0 0 0 0 g 0 0 2290.0 103.0 2197.0 1078.0 0.0 0.0 0.0 2417.0 0 0 0 0 0 0 0 0 0 t 0 0 1164.0 3247.0 116.0 66.0 8832.0 8832.0 0.0 1276.0 0 0 0 0 0 0 0 0 0

MA1507.1_shift2 (HOXD4)
; oligos_8nt_mkv5_m31 versus MA1507.1 (HOXD4); m=36/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.437989; --rYmATTAr--------- ; cor=; Ncor= a 0 0 1186.0 0.0 1542.0 3405.0 0.0 0.0 3405.0 1102.0 0 0 0 0 0 0 0 0 0 c 0 0 705.0 1184.0 1862.0 0.0 0.0 0.0 0.0 525.0 0 0 0 0 0 0 0 0 0 g 0 0 1155.0 0.0 0.0 176.0 0.0 0.0 194.0 1147.0 0 0 0 0 0 0 0 0 0 t 0 0 359.0 3405.0 0.0 0.0 3405.0 3405.0 0.0 631.0 0 0 0 0 0 0 0 0 0

MA0158.2_shift2 (HOXA5)
; oligos_8nt_mkv5_m31 versus MA0158.2 (HOXA5); m=37/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.437176; --symATTAs--------- ; cor=; Ncor= a 0 0 142.0 0.0 3130.0 3130.0 0.0 0.0 3130.0 480.0 0 0 0 0 0 0 0 0 0 c 0 0 832.0 1052.0 1632.0 0.0 0.0 0.0 0.0 1463.0 0 0 0 0 0 0 0 0 0 g 0 0 1759.0 0.0 81.0 0.0 0.0 885.0 0.0 1133.0 0 0 0 0 0 0 0 0 0 t 0 0 397.0 2078.0 0.0 0.0 3130.0 3130.0 0.0 54.0 0 0 0 0 0 0 0 0 0

MA0723.1_rc_shift2 (VAX2_rc)
; oligos_8nt_mkv5_m31 versus MA0723.1_rc (VAX2_rc); m=38/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.436412; --gTmATTAr--------- ; cor=; Ncor= a 0 0 3069.0 562.0 14297.0 14297.0 218.0 565.0 14297.0 6482.0 0 0 0 0 0 0 0 0 0 c 0 0 2869.0 3818.0 5673.0 564.0 94.0 414.0 221.0 1384.0 0 0 0 0 0 0 0 0 0 g 0 0 5648.0 179.0 987.0 161.0 213.0 2781.0 2823.0 7816.0 0 0 0 0 0 0 0 0 0 t 0 0 2711.0 14297.0 1341.0 576.0 14297.0 14297.0 1410.0 921.0 0 0 0 0 0 0 0 0 0

MA1496.1_shift2 (HOXA4)
; oligos_8nt_mkv5_m31 versus MA1496.1 (HOXA4); m=39/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.435048; --rYmATTAr--------- ; cor=; Ncor= a 0 0 1089.0 0.0 893.0 2454.0 0.0 0.0 2454.0 636.0 0 0 0 0 0 0 0 0 0 c 0 0 397.0 967.0 1561.0 0.0 0.0 173.0 146.0 593.0 0 0 0 0 0 0 0 0 0 g 0 0 1365.0 0.0 176.0 684.0 39.0 171.0 260.0 840.0 0 0 0 0 0 0 0 0 0 t 0 0 94.0 2454.0 0.0 0.0 2454.0 2454.0 0.0 385.0 0 0 0 0 0 0 0 0 0

MA1504.1_shift2 (HOXC4)
; oligos_8nt_mkv5_m31 versus MA1504.1 (HOXC4); m=40/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.434171; --rYmATTAr--------- ; cor=; Ncor= a 0 0 2731.0 188.0 3607.0 8759.0 0.0 0.0 8759.0 2776.0 0 0 0 0 0 0 0 0 0 c 0 0 1867.0 3111.0 5152.0 0.0 0.0 0.0 0.0 1679.0 0 0 0 0 0 0 0 0 0 g 0 0 2809.0 0.0 0.0 583.0 0.0 0.0 825.0 2713.0 0 0 0 0 0 0 0 0 0 t 0 0 1353.0 8759.0 0.0 0.0 8759.0 8759.0 0.0 1592.0 0 0 0 0 0 0 0 0 0

MA0903.1_shift1 (HOXB3)
; oligos_8nt_mkv5_m31 versus MA0903.1 (HOXB3); m=41/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.43291; -asymATTArc-------- ; cor=; Ncor= a 0 4500.0 2554.0 1744.0 7793.0 12899.0 0.0 441.0 12899.0 4542.0 3199.0 0 0 0 0 0 0 0 0 c 0 2526.0 4145.0 4979.0 5106.0 545.0 150.0 839.0 119.0 2119.0 3995.0 0 0 0 0 0 0 0 0 g 0 3151.0 4005.0 604.0 838.0 640.0 0.0 0.0 0.0 4732.0 2981.0 0 0 0 0 0 0 0 0 t 0 2722.0 2194.0 7920.0 697.0 242.0 12899.0 12899.0 574.0 1506.0 2724.0 0 0 0 0 0 0 0 0

MA0722.1_rc_shift2 (VAX1_rc)
; oligos_8nt_mkv5_m31 versus MA0722.1_rc (VAX1_rc); m=42/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.431891; --rTaATTAr--------- ; cor=; Ncor= a 0 0 1433.0 398.0 5253.0 5253.0 133.0 302.0 5253.0 2479.0 0 0 0 0 0 0 0 0 0 c 0 0 933.0 1332.0 1951.0 213.0 46.0 189.0 101.0 455.0 0 0 0 0 0 0 0 0 0 g 0 0 1911.0 87.0 321.0 86.0 153.0 863.0 995.0 2775.0 0 0 0 0 0 0 0 0 0 t 0 0 977.0 5253.0 508.0 297.0 5253.0 5253.0 679.0 447.0 0 0 0 0 0 0 0 0 0

MA0612.2_shift2 (EMX1)
; oligos_8nt_mkv5_m31 versus MA0612.2 (EMX1); m=43/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.431548; --sTAATTAs--------- ; cor=; Ncor= a 0 0 1276.0 19.0 9544.0 9544.0 0.0 0.0 9544.0 1333.0 0 0 0 0 0 0 0 0 0 c 0 0 3425.0 2263.0 1235.0 0.0 0.0 0.0 0.0 2633.0 0 0 0 0 0 0 0 0 0 g 0 0 3066.0 0.0 0.0 0.0 0.0 933.0 0.0 4516.0 0 0 0 0 0 0 0 0 0 t 0 0 1777.0 7281.0 0.0 0.0 9544.0 9544.0 0.0 1062.0 0 0 0 0 0 0 0 0 0

MA1498.1_shift2 (HOXA7)
; oligos_8nt_mkv5_m31 versus MA1498.1 (HOXA7); m=44/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.430345; --gymATTAc--------- ; cor=; Ncor= a 0 0 481.0 0.0 4227.0 4227.0 0.0 159.0 4227.0 828.0 0 0 0 0 0 0 0 0 0 c 0 0 839.0 2319.0 3335.0 83.0 0.0 0.0 0.0 1720.0 0 0 0 0 0 0 0 0 0 g 0 0 2302.0 9.0 417.0 25.0 0.0 815.0 0.0 977.0 0 0 0 0 0 0 0 0 0 t 0 0 605.0 1908.0 226.0 148.0 4227.0 4227.0 0.0 702.0 0 0 0 0 0 0 0 0 0

MA0888.1_shift1 (EVX2)
; oligos_8nt_mkv5_m31 versus MA0888.1 (EVX2); m=45/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.428623; -svTaATTAgc-------- ; cor=; Ncor= a 0 4411.0 5143.0 2541.0 10108.0 20419.0 5.0 303.0 20419.0 4090.0 3778.0 0 0 0 0 0 0 0 0 c 0 5113.0 6306.0 5669.0 5018.0 156.0 166.0 863.0 0.0 4858.0 7715.0 0 0 0 0 0 0 0 0 g 0 7814.0 7041.0 969.0 4541.0 881.0 702.0 445.0 1559.0 7789.0 4997.0 0 0 0 0 0 0 0 0 t 0 3082.0 1929.0 20419.0 752.0 0.0 20419.0 20419.0 446.0 3682.0 3930.0 0 0 0 0 0 0 0 0

MA0726.1_rc_shift2 (VSX2_rc)
; oligos_8nt_mkv5_m31 versus MA0726.1_rc (VSX2_rc); m=46/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.428057; --cTAATTAr--------- ; cor=; Ncor= a 0 0 3387.0 1014.0 13809.0 13809.0 63.0 402.0 13809.0 4255.0 0 0 0 0 0 0 0 0 0 c 0 0 4288.0 2109.0 447.0 92.0 123.0 343.0 363.0 445.0 0 0 0 0 0 0 0 0 0 g 0 0 3243.0 321.0 567.0 186.0 124.0 397.0 2725.0 9554.0 0 0 0 0 0 0 0 0 0 t 0 0 2891.0 13809.0 626.0 118.0 13809.0 13809.0 1080.0 427.0 0 0 0 0 0 0 0 0 0

MA0658.1_rc_shift1 (LHX6_rc)
; oligos_8nt_mkv5_m31 versus MA0658.1_rc (LHX6_rc); m=47/83; ncol2=10; w=8; offset=-2; strand=R; shift=1; score=0.426326; -ryTAATTAgy-------- ; cor=; Ncor= a 0 1507.0 194.0 2.0 4438.0 4438.0 0.0 0.0 4438.0 1422.0 264.0 0 0 0 0 0 0 0 0 c 0 728.0 2769.0 243.0 108.0 15.0 0.0 487.0 28.0 791.0 1548.0 0 0 0 0 0 0 0 0 g 0 1654.0 637.0 0.0 766.0 98.0 14.0 90.0 253.0 3015.0 769.0 0 0 0 0 0 0 0 0 t 0 548.0 1668.0 4438.0 0.0 0.0 4438.0 4438.0 0.0 529.0 1857.0 0 0 0 0 0 0 0 0

MA0725.1_rc_shift2 (VSX1_rc)
; oligos_8nt_mkv5_m31 versus MA0725.1_rc (VSX1_rc); m=48/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.426234; --vTAATTAr--------- ; cor=; Ncor= a 0 0 3732.0 1372.0 13572.0 13572.0 90.0 554.0 13572.0 5119.0 0 0 0 0 0 0 0 0 0 c 0 0 3658.0 3337.0 984.0 103.0 172.0 553.0 572.0 561.0 0 0 0 0 0 0 0 0 0 g 0 0 3555.0 516.0 761.0 199.0 154.0 626.0 3131.0 8453.0 0 0 0 0 0 0 0 0 0 t 0 0 2626.0 13572.0 898.0 172.0 13572.0 13572.0 1836.0 756.0 0 0 0 0 0 0 0 0 0

MA1500.1_rc_shift2 (HOXB6_rc)
; oligos_8nt_mkv5_m31 versus MA1500.1_rc (HOXB6_rc); m=49/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.425587; --gymATTAa--------- ; cor=; Ncor= a 0 0 1324.0 0.0 6192.0 6192.0 0.0 564.0 6192.0 3724.0 0 0 0 0 0 0 0 0 0 c 0 0 996.0 3064.0 4139.0 727.0 0.0 0.0 0.0 2395.0 0 0 0 0 0 0 0 0 0 g 0 0 4868.0 0.0 926.0 436.0 0.0 647.0 710.0 2468.0 0 0 0 0 0 0 0 0 0 t 0 0 691.0 3128.0 403.0 0.0 6192.0 6192.0 0.0 1357.0 0 0 0 0 0 0 0 0 0

MA0900.2_shift2 (HOXA2)
; oligos_8nt_mkv5_m31 versus MA0900.2 (HOXA2); m=50/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.42472; --sTMATTAs--------- ; cor=; Ncor= a 0 0 8880.0 0.0 39674.0 56949.0 0.0 0.0 56949.0 10641.0 0 0 0 0 0 0 0 0 0 c 0 0 19452.0 3636.0 17275.0 0.0 0.0 0.0 0.0 16330.0 0 0 0 0 0 0 0 0 0 g 0 0 22686.0 0.0 290.0 0.0 0.0 0.0 2052.0 22246.0 0 0 0 0 0 0 0 0 0 t 0 0 5931.0 56949.0 0.0 0.0 56949.0 56949.0 0.0 7731.0 0 0 0 0 0 0 0 0 0

MA0630.1_rc_shift2 (SHOX_rc)
; oligos_8nt_mkv5_m31 versus MA0630.1_rc (SHOX_rc); m=51/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.424473; --yyAATTAr--------- ; cor=; Ncor= a 0 0 133.0 111.0 768.0 943.0 2.0 45.0 886.0 357.0 0 0 0 0 0 0 0 0 0 c 0 0 379.0 424.0 84.0 27.0 5.0 55.0 9.0 162.0 0 0 0 0 0 0 0 0 0 g 0 0 187.0 48.0 50.0 15.0 2.0 48.0 30.0 301.0 0 0 0 0 0 0 0 0 0 t 0 0 301.0 416.0 98.0 15.0 991.0 852.0 74.0 179.0 0 0 0 0 0 0 0 0 0

MA1577.1_shift2 (TLX2)
; oligos_8nt_mkv5_m31 versus MA1577.1 (TLX2); m=52/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.424275; --yyAATTAr--------- ; cor=; Ncor= a 0 0 997.0 1435.0 7799.0 7799.0 0.0 0.0 7799.0 2184.0 0 0 0 0 0 0 0 0 0 c 0 0 2572.0 7799.0 0.0 0.0 0.0 0.0 0.0 1323.0 0 0 0 0 0 0 0 0 0 g 0 0 1851.0 1112.0 80.0 0.0 0.0 0.0 0.0 3439.0 0 0 0 0 0 0 0 0 0 t 0 0 2379.0 8156.0 0.0 0.0 7799.0 7799.0 0.0 852.0 0 0 0 0 0 0 0 0 0

MA0648.1_rc_shift1 (GSC_rc)
; oligos_8nt_mkv5_m31 versus MA0648.1_rc (GSC_rc); m=53/83; ncol2=10; w=8; offset=-2; strand=R; shift=1; score=0.423324; -rsGGATTArs-------- ; cor=; Ncor= a 0 2168.0 1115.0 1099.0 787.0 6081.0 0.0 89.0 6081.0 1688.0 882.0 0 0 0 0 0 0 0 0 c 0 619.0 1732.0 828.0 452.0 144.0 0.0 176.0 0.0 553.0 2039.0 0 0 0 0 0 0 0 0 g 0 2197.0 2398.0 6081.0 6081.0 25.0 0.0 71.0 54.0 2885.0 1912.0 0 0 0 0 0 0 0 0 t 0 1097.0 836.0 315.0 416.0 0.0 6081.0 6081.0 0.0 955.0 1249.0 0 0 0 0 0 0 0 0

MA0724.1_shift1 (VENTX)
; oligos_8nt_mkv5_m31 versus MA0724.1 (VENTX); m=54/83; ncol2=9; w=7; offset=-2; strand=D; shift=1; score=0.422958; -AmCrATTAr--------- ; cor=; Ncor= a 0 17344.0 9981.0 562.0 7795.0 23923.0 0.0 0.0 23923.0 8820.0 0 0 0 0 0 0 0 0 0 c 0 983.0 13942.0 23923.0 5650.0 203.0 0.0 0.0 0.0 706.0 0 0 0 0 0 0 0 0 0 g 0 1934.0 6941.0 0.0 16128.0 0.0 0.0 0.0 0.0 15103.0 0 0 0 0 0 0 0 0 0 t 0 3662.0 5912.0 3964.0 626.0 74.0 23923.0 23923.0 0.0 2189.0 0 0 0 0 0 0 0 0 0

MA1518.1_shift2 (LHX1)
; oligos_8nt_mkv5_m31 versus MA1518.1 (LHX1); m=55/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.421869; --syaATtAs--------- ; cor=; Ncor= a 0 0 2684.0 949.0 14954.0 14954.0 0.0 1101.0 14954.0 3023.0 0 0 0 0 0 0 0 0 0 c 0 0 4118.0 9230.0 4878.0 270.0 0.0 5413.0 495.0 5037.0 0 0 0 0 0 0 0 0 0 g 0 0 5234.0 572.0 4035.0 39.0 0.0 3100.0 617.0 3908.0 0 0 0 0 0 0 0 0 0 t 0 0 2918.0 5724.0 2084.0 569.0 14954.0 14954.0 2105.0 2986.0 0 0 0 0 0 0 0 0 0

MA0705.1_rc_shift2 (Lhx8_rc)
; oligos_8nt_mkv5_m31 versus MA0705.1_rc (Lhx8_rc); m=56/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.421394; --yYRATTRg--------- ; cor=; Ncor= a 0 0 414.0 0.0 5092.0 5092.0 0.0 0.0 5092.0 1108.0 0 0 0 0 0 0 0 0 0 c 0 0 2156.0 1929.0 88.0 0.0 0.0 1670.0 0.0 925.0 0 0 0 0 0 0 0 0 0 g 0 0 1156.0 0.0 2083.0 0.0 0.0 160.0 1996.0 2588.0 0 0 0 0 0 0 0 0 0 t 0 0 1366.0 5092.0 0.0 0.0 5092.0 5092.0 0.0 472.0 0 0 0 0 0 0 0 0 0

MA0891.1_rc_shift1 (GSC2_rc)
; oligos_8nt_mkv5_m31 versus MA0891.1_rc (GSC2_rc); m=57/83; ncol2=10; w=8; offset=-2; strand=R; shift=1; score=0.421345; -dsgGATTArg-------- ; cor=; Ncor= a 0 525.0 444.0 439.0 204.0 2016.0 132.0 201.0 2016.0 630.0 427.0 0 0 0 0 0 0 0 0 c 0 168.0 698.0 422.0 179.0 145.0 0.0 56.0 0.0 190.0 442.0 0 0 0 0 0 0 0 0 g 0 814.0 668.0 2016.0 2016.0 41.0 11.0 87.0 0.0 839.0 686.0 0 0 0 0 0 0 0 0 t 0 509.0 205.0 182.0 255.0 0.0 2016.0 2016.0 116.0 356.0 461.0 0 0 0 0 0 0 0 0

MA0068.2_rc_shift2 (PAX4_rc)
; oligos_8nt_mkv5_m31 versus MA0068.2_rc (PAX4_rc); m=58/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.42046; --cTAATTag--------- ; cor=; Ncor= a 0 0 41.0 12.0 333.0 333.0 0.0 3.0 333.0 105.0 0 0 0 0 0 0 0 0 0 c 0 0 333.0 11.0 10.0 5.0 0.0 0.0 120.0 47.0 0 0 0 0 0 0 0 0 0 g 0 0 93.0 89.0 11.0 0.0 0.0 2.0 30.0 333.0 0 0 0 0 0 0 0 0 0 t 0 0 150.0 333.0 18.0 0.0 333.0 333.0 58.0 37.0 0 0 0 0 0 0 0 0 0

MA1502.1_shift2 (HOXB8)
; oligos_8nt_mkv5_m31 versus MA1502.1 (HOXB8); m=59/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.418114; --gymATTAm--------- ; cor=; Ncor= a 0 0 522.0 0.0 4474.0 4474.0 0.0 284.0 4474.0 1174.0 0 0 0 0 0 0 0 0 0 c 0 0 536.0 2560.0 3374.0 0.0 0.0 0.0 0.0 1704.0 0 0 0 0 0 0 0 0 0 g 0 0 2779.0 0.0 89.0 0.0 0.0 542.0 0.0 830.0 0 0 0 0 0 0 0 0 0 t 0 0 637.0 1914.0 0.0 0.0 4474.0 4474.0 0.0 766.0 0 0 0 0 0 0 0 0 0

MA0027.2_shift2 (EN1)
; oligos_8nt_mkv5_m31 versus MA0027.2 (EN1); m=60/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.417635; --syAATTAg--------- ; cor=; Ncor= a 0 0 427.0 104.0 2891.0 2891.0 0.0 57.0 2891.0 689.0 0 0 0 0 0 0 0 0 0 c 0 0 1174.0 1328.0 99.0 28.0 0.0 483.0 0.0 683.0 0 0 0 0 0 0 0 0 0 g 0 0 765.0 5.0 71.0 0.0 0.0 162.0 30.0 1216.0 0 0 0 0 0 0 0 0 0 t 0 0 525.0 1562.0 0.0 0.0 2891.0 2891.0 132.0 302.0 0 0 0 0 0 0 0 0 0

MA0717.1_shift2 (RAX2)
; oligos_8nt_mkv5_m31 versus MA0717.1 (RAX2); m=61/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.417532; --yyAATTAr--------- ; cor=; Ncor= a 0 0 5334.0 3558.0 38860.0 38860.0 270.0 2167.0 38860.0 13411.0 0 0 0 0 0 0 0 0 0 c 0 0 15810.0 19645.0 3060.0 1523.0 738.0 4232.0 2644.0 7487.0 0 0 0 0 0 0 0 0 0 g 0 0 7049.0 1688.0 4490.0 757.0 125.0 2513.0 360.0 12362.0 0 0 0 0 0 0 0 0 0 t 0 0 10666.0 19215.0 2421.0 1030.0 38860.0 38860.0 4258.0 5601.0 0 0 0 0 0 0 0 0 0

MA0892.1_shift1 (GSX1)
; oligos_8nt_mkv5_m31 versus MA0892.1 (GSX1); m=62/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.416578; -mcymATTArh-------- ; cor=; Ncor= a 0 331.0 164.0 124.0 781.0 1183.0 90.0 106.0 1183.0 448.0 350.0 0 0 0 0 0 0 0 0 c 0 391.0 535.0 450.0 402.0 106.0 79.0 106.0 0.0 249.0 305.0 0 0 0 0 0 0 0 0 g 0 209.0 258.0 48.0 60.0 123.0 3.0 0.0 9.0 313.0 214.0 0 0 0 0 0 0 0 0 t 0 252.0 226.0 733.0 177.0 50.0 1183.0 1183.0 103.0 173.0 315.0 0 0 0 0 0 0 0 0

MA0887.1_shift1 (EVX1)
; oligos_8nt_mkv5_m31 versus MA0887.1 (EVX1); m=63/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.415232; -gvtaATTAsc-------- ; cor=; Ncor= a 0 1959.0 2045.0 1196.0 3899.0 7894.0 0.0 232.0 7894.0 1333.0 1432.0 0 0 0 0 0 0 0 0 c 0 1806.0 2506.0 2343.0 1752.0 29.0 67.0 463.0 14.0 2098.0 3318.0 0 0 0 0 0 0 0 0 g 0 3092.0 2629.0 269.0 1885.0 236.0 267.0 171.0 725.0 2720.0 1958.0 0 0 0 0 0 0 0 0 t 0 1037.0 714.0 7894.0 358.0 0.0 7894.0 7894.0 172.0 1743.0 1186.0 0 0 0 0 0 0 0 0

MA0720.1_shift2 (Shox2)
; oligos_8nt_mkv5_m31 versus MA0720.1 (Shox2); m=64/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.41406; --yyAATTAr--------- ; cor=; Ncor= a 0 0 2390.0 979.0 18179.0 18179.0 29.0 597.0 18179.0 6542.0 0 0 0 0 0 0 0 0 0 c 0 0 7695.0 9027.0 626.0 138.0 12.0 545.0 193.0 3021.0 0 0 0 0 0 0 0 0 0 g 0 0 3292.0 228.0 426.0 3.0 0.0 870.0 36.0 6337.0 0 0 0 0 0 0 0 0 0 t 0 0 4802.0 9152.0 766.0 79.0 18179.0 18179.0 895.0 2278.0 0 0 0 0 0 0 0 0 0

MA0886.1_shift1 (EMX2)
; oligos_8nt_mkv5_m31 versus MA0886.1 (EMX2); m=65/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.414025; -rsTAATTAgs-------- ; cor=; Ncor= a 0 10479.0 5704.0 834.0 37262.0 37262.0 0.0 0.0 37262.0 9139.0 5970.0 0 0 0 0 0 0 0 0 c 0 8412.0 13337.0 7761.0 4938.0 0.0 0.0 0.0 0.0 7124.0 13054.0 0 0 0 0 0 0 0 0 g 0 12802.0 10582.0 0.0 678.0 0.0 0.0 4025.0 0.0 17672.0 10195.0 0 0 0 0 0 0 0 0 t 0 5569.0 7639.0 29501.0 1236.0 0.0 37262.0 37262.0 0.0 3328.0 8043.0 0 0 0 0 0 0 0 0

MA0904.2_rc_shift2 (HOXB5_rc)
; oligos_8nt_mkv5_m31 versus MA0904.2_rc (HOXB5_rc); m=66/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.413938; --sTMATKAs--------- ; cor=; Ncor= a 0 0 450.0 0.0 3067.0 3067.0 0.0 0.0 3067.0 294.0 0 0 0 0 0 0 0 0 0 c 0 0 1146.0 564.0 1061.0 0.0 0.0 0.0 0.0 1273.0 0 0 0 0 0 0 0 0 0 g 0 0 1219.0 0.0 26.0 0.0 0.0 1031.0 537.0 1120.0 0 0 0 0 0 0 0 0 0 t 0 0 253.0 3067.0 6.0 0.0 3067.0 3067.0 0.0 381.0 0 0 0 0 0 0 0 0 0

MA1481.1_shift2 (DRGX)
; oligos_8nt_mkv5_m31 versus MA1481.1 (DRGX); m=67/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.412953; --yyAATTAs--------- ; cor=; Ncor= a 0 0 1172.0 1079.0 14867.0 14867.0 0.0 0.0 14867.0 3117.0 0 0 0 0 0 0 0 0 0 c 0 0 8180.0 5997.0 501.0 0.0 0.0 813.0 17.0 4651.0 0 0 0 0 0 0 0 0 0 g 0 0 2692.0 1111.0 2037.0 0.0 0.0 209.0 962.0 3995.0 0 0 0 0 0 0 0 0 0 t 0 0 6687.0 8870.0 0.0 0.0 14867.0 14867.0 144.0 3105.0 0 0 0 0 0 0 0 0 0

MA0721.1_shift2 (UNCX)
; oligos_8nt_mkv5_m31 versus MA0721.1 (UNCX); m=68/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.412459; --yyAATTAr--------- ; cor=; Ncor= a 0 0 4980.0 3975.0 36926.0 36926.0 481.0 3111.0 36926.0 13811.0 0 0 0 0 0 0 0 0 0 c 0 0 13363.0 16800.0 2540.0 1302.0 806.0 3958.0 2211.0 7825.0 0 0 0 0 0 0 0 0 0 g 0 0 5711.0 2086.0 4582.0 420.0 117.0 1782.0 731.0 10480.0 0 0 0 0 0 0 0 0 0 t 0 0 12871.0 20126.0 2629.0 890.0 36926.0 36926.0 3885.0 4810.0 0 0 0 0 0 0 0 0 0

MA0498.2_rc_shift7 (MEIS1_rc)
; oligos_8nt_mkv5_m31 versus MA0498.2_rc (MEIS1_rc); m=69/83; ncol2=7; w=7; offset=4; strand=R; shift=7; score=0.410676; -------cTGTCAw----- ; cor=; Ncor= a 0 0 0 0 0 0 0 15106.0 3861.0 1155.0 0.0 0.0 77159.0 24921.0 0 0 0 0 0 c 0 0 0 0 0 0 0 29965.0 9263.0 0.0 672.0 77159.0 3174.0 9714.0 0 0 0 0 0 g 0 0 0 0 0 0 0 14864.0 0.0 77159.0 2903.0 1249.0 5575.0 18797.0 0 0 0 0 0 t 0 0 0 0 0 0 0 17224.0 77159.0 0.0 77159.0 0.0 8690.0 23727.0 0 0 0 0 0

MA0910.2_shift2 (HOXD8)
; oligos_8nt_mkv5_m31 versus MA0910.2 (HOXD8); m=70/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.410664; --gymATTAm--------- ; cor=; Ncor= a 0 0 537.0 0.0 3629.0 3629.0 0.0 178.0 3629.0 943.0 0 0 0 0 0 0 0 0 0 c 0 0 405.0 2150.0 3006.0 0.0 0.0 0.0 0.0 1683.0 0 0 0 0 0 0 0 0 0 g 0 0 2287.0 0.0 47.0 0.0 0.0 507.0 0.0 551.0 0 0 0 0 0 0 0 0 0 t 0 0 399.0 1480.0 0.0 0.0 3629.0 3629.0 0.0 452.0 0 0 0 0 0 0 0 0 0

MA0628.1_shift1 (POU6F1)
; oligos_8nt_mkv5_m31 versus MA0628.1 (POU6F1); m=71/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.409922; -ayTAATTArt-------- ; cor=; Ncor= a 0 507.0 151.0 32.0 905.0 938.0 14.0 18.0 950.0 353.0 89.0 0 0 0 0 0 0 0 0 c 0 193.0 351.0 10.0 70.0 34.0 14.0 8.0 8.0 145.0 211.0 0 0 0 0 0 0 0 0 g 0 211.0 145.0 8.0 8.0 14.0 34.0 70.0 10.0 351.0 193.0 0 0 0 0 0 0 0 0 t 0 89.0 353.0 950.0 18.0 14.0 938.0 905.0 32.0 151.0 507.0 0 0 0 0 0 0 0 0

MA0710.1_shift1 (NOTO)
; oligos_8nt_mkv5_m31 versus MA0710.1 (NOTO); m=72/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.409603; -vytMATTArs-------- ; cor=; Ncor= a 0 5631.0 774.0 7097.0 15096.0 21405.0 0.0 374.0 21405.0 7038.0 4078.0 0 0 0 0 0 0 0 0 c 0 5682.0 13986.0 4001.0 6310.0 0.0 0.0 62.0 0.0 3856.0 7711.0 0 0 0 0 0 0 0 0 g 0 6529.0 617.0 573.0 0.0 0.0 0.0 422.0 2057.0 7679.0 5493.0 0 0 0 0 0 0 0 0 t 0 3563.0 7419.0 21405.0 139.0 0.0 21405.0 21405.0 1904.0 2832.0 4124.0 0 0 0 0 0 0 0 0

MA1495.1_rc_shift2 (HOXA1_rc)
; oligos_8nt_mkv5_m31 versus MA1495.1_rc (HOXA1_rc); m=73/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.409422; --sTaATTAs--------- ; cor=; Ncor= a 0 0 1182.0 0.0 7406.0 7406.0 0.0 0.0 7406.0 1328.0 0 0 0 0 0 0 0 0 0 c 0 0 2237.0 1576.0 2265.0 0.0 0.0 1244.0 0.0 2667.0 0 0 0 0 0 0 0 0 0 g 0 0 2811.0 0.0 1310.0 0.0 0.0 2083.0 1546.0 2244.0 0 0 0 0 0 0 0 0 0 t 0 0 1175.0 7406.0 0.0 0.0 7406.0 7406.0 0.0 1167.0 0 0 0 0 0 0 0 0 0

MA0704.1_shift2 (Lhx4)
; oligos_8nt_mkv5_m31 versus MA0704.1 (Lhx4); m=74/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.408645; --yTAATTAr--------- ; cor=; Ncor= a 0 0 422.0 217.0 2896.0 2896.0 0.0 0.0 2896.0 1314.0 0 0 0 0 0 0 0 0 0 c 0 0 817.0 912.0 428.0 0.0 0.0 446.0 39.0 449.0 0 0 0 0 0 0 0 0 0 g 0 0 495.0 0.0 309.0 0.0 0.0 57.0 316.0 857.0 0 0 0 0 0 0 0 0 0 t 0 0 1161.0 2896.0 255.0 155.0 2896.0 2896.0 135.0 275.0 0 0 0 0 0 0 0 0 0

MA1463.1_rc_shift1 (ARGFX_rc)
; oligos_8nt_mkv5_m31 versus MA1463.1_rc (ARGFX_rc); m=75/83; ncol2=10; w=8; offset=-2; strand=R; shift=1; score= 0.408; -tyTAATTAgm-------- ; cor=; Ncor= a 0 3158.0 900.0 1048.0 16589.0 16589.0 0.0 4.0 16589.0 4423.0 6479.0 0 0 0 0 0 0 0 0 c 0 2351.0 6249.0 1492.0 0.0 0.0 0.0 0.0 96.0 1748.0 4467.0 0 0 0 0 0 0 0 0 g 0 4098.0 563.0 499.0 44.0 0.0 0.0 46.0 1130.0 16589.0 1750.0 0 0 0 0 0 0 0 0 t 0 6983.0 10340.0 16589.0 0.0 0.0 16589.0 16589.0 270.0 2558.0 3893.0 0 0 0 0 0 0 0 0

MA0661.1_rc_shift1 (MEOX1_rc)
; oligos_8nt_mkv5_m31 versus MA0661.1_rc (MEOX1_rc); m=76/83; ncol2=10; w=8; offset=-2; strand=R; shift=1; score=0.407093; -gkTAATTAsy-------- ; cor=; Ncor= a 0 506.0 683.0 6.0 3000.0 3000.0 3.0 39.0 3000.0 115.0 405.0 0 0 0 0 0 0 0 0 c 0 614.0 449.0 338.0 328.0 0.0 2.0 151.0 53.0 1363.0 986.0 0 0 0 0 0 0 0 0 g 0 1309.0 911.0 0.0 242.0 29.0 0.0 848.0 406.0 1637.0 704.0 0 0 0 0 0 0 0 0 t 0 572.0 956.0 3000.0 14.0 8.0 3000.0 3000.0 64.0 150.0 906.0 0 0 0 0 0 0 0 0

MA0701.2_shift2 (LHX9)
; oligos_8nt_mkv5_m31 versus MA0701.2 (LHX9); m=77/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.406721; --CyAATTAr--------- ; cor=; Ncor= a 0 0 390.0 0.0 6075.0 6075.0 0.0 0.0 6075.0 2261.0 0 0 0 0 0 0 0 0 0 c 0 0 6075.0 2093.0 505.0 0.0 0.0 0.0 0.0 1013.0 0 0 0 0 0 0 0 0 0 g 0 0 1056.0 0.0 0.0 0.0 0.0 170.0 305.0 1946.0 0 0 0 0 0 0 0 0 0 t 0 0 1219.0 3983.0 20.0 0.0 6075.0 6075.0 0.0 856.0 0 0 0 0 0 0 0 0 0

MA0716.1_shift2 (PRRX1)
; oligos_8nt_mkv5_m31 versus MA0716.1 (PRRX1); m=78/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.406697; --yyAATTAr--------- ; cor=; Ncor= a 0 0 4132.0 2373.0 23897.0 23897.0 0.0 1264.0 23897.0 9498.0 0 0 0 0 0 0 0 0 0 c 0 0 9063.0 11122.0 1088.0 503.0 3.0 2302.0 644.0 4269.0 0 0 0 0 0 0 0 0 0 g 0 0 4339.0 1121.0 1776.0 202.0 0.0 1004.0 136.0 6366.0 0 0 0 0 0 0 0 0 0 t 0 0 6364.0 12775.0 810.0 209.0 23897.0 23897.0 1229.0 3765.0 0 0 0 0 0 0 0 0 0

MA0711.1_rc_shift2 (OTX1_rc)
; oligos_8nt_mkv5_m31 versus MA0711.1_rc (OTX1_rc); m=79/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.406428; --sgGATTAr--------- ; cor=; Ncor= a 0 0 4787.0 3363.0 378.0 23441.0 0.0 544.0 23441.0 8636.0 0 0 0 0 0 0 0 0 0 c 0 0 10599.0 8662.0 659.0 3160.0 0.0 254.0 0.0 3186.0 0 0 0 0 0 0 0 0 0 g 0 0 6182.0 23441.0 23441.0 0.0 0.0 0.0 90.0 6501.0 0 0 0 0 0 0 0 0 0 t 0 0 1873.0 789.0 647.0 243.0 23441.0 23441.0 745.0 5118.0 0 0 0 0 0 0 0 0 0

MA0654.1_shift2 (ISX)
; oligos_8nt_mkv5_m31 versus MA0654.1 (ISX); m=80/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.406152; --yyAATTAr--------- ; cor=; Ncor= a 0 0 318.0 10.0 2065.0 2065.0 0.0 0.0 2065.0 770.0 0 0 0 0 0 0 0 0 0 c 0 0 863.0 1003.0 48.0 16.0 0.0 0.0 0.0 307.0 0 0 0 0 0 0 0 0 0 g 0 0 364.0 0.0 5.0 0.0 0.0 24.0 0.0 704.0 0 0 0 0 0 0 0 0 0 t 0 0 520.0 1061.0 24.0 10.0 2065.0 2065.0 49.0 283.0 0 0 0 0 0 0 0 0 0

MA0889.1_shift1 (GBX1)
; oligos_8nt_mkv5_m31 versus MA0889.1 (GBX1); m=81/83; ncol2=10; w=8; offset=-2; strand=D; shift=1; score=0.405095; -rsyAATTAgc-------- ; cor=; Ncor= a 0 10001.0 1674.0 243.0 27339.0 27339.0 45.0 312.0 27339.0 5720.0 3526.0 0 0 0 0 0 0 0 0 c 0 6727.0 14978.0 13543.0 589.0 172.0 128.0 438.0 50.0 6377.0 11717.0 0 0 0 0 0 0 0 0 g 0 7838.0 6964.0 15.0 758.0 29.0 1.0 246.0 8.0 12203.0 5441.0 0 0 0 0 0 0 0 0 t 0 2774.0 3723.0 13796.0 157.0 23.0 27339.0 27339.0 321.0 3039.0 6655.0 0 0 0 0 0 0 0 0

MA0666.1_shift2 (MSX1)
; oligos_8nt_mkv5_m31 versus MA0666.1 (MSX1); m=82/83; ncol2=8; w=7; offset=-1; strand=D; shift=2; score=0.404693; --syAATTAv--------- ; cor=; Ncor= a 0 0 461.0 82.0 3073.0 3073.0 0.0 63.0 3073.0 855.0 0 0 0 0 0 0 0 0 0 c 0 0 1324.0 2117.0 332.0 107.0 0.0 205.0 118.0 814.0 0 0 0 0 0 0 0 0 0 g 0 0 787.0 33.0 139.0 0.0 31.0 251.0 105.0 945.0 0 0 0 0 0 0 0 0 0 t 0 0 501.0 956.0 16.0 0.0 3073.0 3073.0 91.0 460.0 0 0 0 0 0 0 0 0 0

MA0682.2_rc_shift2 (PITX1_rc)
; oligos_8nt_mkv5_m31 versus MA0682.2_rc (PITX1_rc); m=83/83; ncol2=8; w=7; offset=-1; strand=R; shift=2; score=0.402949; --gGGATTAr--------- ; cor=; Ncor= a 0 0 2113.0 547.0 141.0 10531.0 0.0 0.0 10531.0 4432.0 0 0 0 0 0 0 0 0 0 c 0 0 1876.0 134.0 0.0 1039.0 0.0 0.0 0.0 2382.0 0 0 0 0 0 0 0 0 0 g 0 0 4194.0 10531.0 10531.0 0.0 0.0 0.0 0.0 6099.0 0 0 0 0 0 0 0 0 0 t 0 0 2348.0 68.0 143.0 0.0 10531.0 10531.0 0.0 2898.0 0 0 0 0 0 0 0 0 0