One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m34/peak-motifs_oligos_8nt_mkv5_m34.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m34/peak-motifs_oligos_8nt_mkv5_m34_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv5_m34_shift0 ; 19 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_8nt_mkv5_m34_shift0 (oligos_8nt_mkv5_m34oligos_8nt_mkv5_m34)
; oligos_8nt_mkv5_m34 (oligos_8nt_mkv5_m34oligos_8nt_mkv5_m34); m=0 (reference); ncol1=12; shift=0; ncol=18; crGCAGCAGCtG------ ; Alignment reference a 110 224 1 0 565 1 1 560 1 0 121 45 0 0 0 0 0 0 c 263 81 0 578 9 2 580 13 2 584 66 51 0 0 0 0 0 0 g 121 173 583 6 10 580 2 11 579 0 71 442 0 0 0 0 0 0 t 90 106 0 0 0 1 1 0 2 0 326 46 0 0 0 0 0 0

MA0500.2_shift0 (MYOG)
; oligos_8nt_mkv5_m34 versus MA0500.2 (MYOG); m=1/18; ncol2=12; w=12; offset=0; strand=D; shift=0; score=0.732522; sarCAGCTGyts------ ; cor=; Ncor= a 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 0 0 0 0 0 c 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 0 0 0 0 0 g 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 0 0 0 0 0 t 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0 0 0 0 0 0

MA1646.1_shift0 (OSR2)
; oligos_8nt_mkv5_m34 versus MA1646.1 (OSR2); m=2/18; ncol2=12; w=12; offset=0; strand=D; shift=0; score=0.713681; amaCAGAAGChr------ ; cor=; Ncor= a 4437.0 4244.0 8520.0 254.0 13599.0 216.0 11678.0 13725.0 416.0 666.0 4386.0 4048.0 0 0 0 0 0 0 c 3641.0 4206.0 2221.0 13937.0 197.0 229.0 703.0 288.0 170.0 12109.0 4274.0 3304.0 0 0 0 0 0 0 g 3246.0 3006.0 2117.0 406.0 737.0 14206.0 901.0 516.0 13982.0 841.0 2266.0 4726.0 0 0 0 0 0 0 t 3484.0 3352.0 1950.0 211.0 275.0 157.0 1526.0 279.0 240.0 1192.0 3882.0 2730.0 0 0 0 0 0 0

MA1628.1_shift1 (Zic1::Zic2)
; oligos_8nt_mkv5_m34 versus MA1628.1 (Zic1::Zic2); m=3/18; ncol2=11; w=11; offset=1; strand=D; shift=1; score=0.657841; -cvCAGCAGGsr------ ; cor=; Ncor= a 0 2072.0 3057.0 29.0 9238.0 96.0 75.0 8950.0 11.0 46.0 2429.0 2524.0 0 0 0 0 0 0 c 0 4620.0 2589.0 9594.0 384.0 195.0 9293.0 311.0 512.0 91.0 2516.0 2154.0 0 0 0 0 0 0 g 0 2206.0 2773.0 106.0 266.0 9527.0 96.0 627.0 9279.0 9631.0 2775.0 3506.0 0 0 0 0 0 0 t 0 994.0 1473.0 163.0 4.0 74.0 428.0 4.0 90.0 124.0 2172.0 1708.0 0 0 0 0 0 0

MA0816.1_rc_shift1 (Ascl2_rc)
; oligos_8nt_mkv5_m34 versus MA0816.1_rc (Ascl2_rc); m=4/18; ncol2=10; w=10; offset=1; strand=R; shift=1; score=0.646819; -rrCAGCTGyt------- ; cor=; Ncor= a 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 0 0 0 0 0 c 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 0 0 0 0 0 g 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 0 0 0 0 0 t 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0 0 0 0 0 0

MA0048.2_shift1 (NHLH1)
; oligos_8nt_mkv5_m34 versus MA0048.2 (NHLH1); m=5/18; ncol2=10; w=10; offset=1; strand=D; shift=1; score=0.628544; -cGCAGCTGCk------- ; cor=; Ncor= a 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 0 0 0 0 c 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 0 0 0 0 g 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 0 0 0 0 t 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0 0 0 0 0

MA1100.2_rc_shift1 (ASCL1_rc)
; oligos_8nt_mkv5_m34 versus MA1100.2_rc (ASCL1_rc); m=6/18; ncol2=10; w=10; offset=1; strand=R; shift=1; score=0.622828; -rgCAGCTGyy------- ; cor=; Ncor= a 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 0 0 0 0 0 c 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 0 0 0 0 0 g 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 0 0 0 0 0 t 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0 0 0 0 0 0

MA1635.1_rc_shift1 (BHLHE22(var.2)_rc)
; oligos_8nt_mkv5_m34 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=7/18; ncol2=10; w=10; offset=1; strand=R; shift=1; score=0.588245; -csCAGCTGsg------- ; cor=; Ncor= a 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 0 0 0 0 0 c 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 0 0 0 0 0 g 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 0 0 0 0 0 t 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0 0 0 0 0 0

MA1529.1_shift0 (NHLH2)
; oligos_8nt_mkv5_m34 versus MA1529.1 (NHLH2); m=8/18; ncol2=18; w=12; offset=0; strand=D; shift=0; score=0.521904; ggGyMGCAGCTGCGyCmc ; cor=; Ncor= a 4834.0 4312.0 3741.0 4921.0 5603.0 2378.0 2.0 21364.0 6.0 525.0 0.0 0.0 693.0 210.0 1184.0 3766.0 6392.0 3601.0 c 2655.0 2219.0 1065.0 6141.0 15451.0 2324.0 21359.0 0.0 2459.0 20268.0 14.0 2.0 20611.0 204.0 7207.0 18351.0 13462.0 11271.0 g 9732.0 13903.0 18450.0 4908.0 671.0 18930.0 2.0 26.0 20096.0 2266.0 3.0 21363.0 275.0 20977.0 1520.0 1183.0 1579.0 2264.0 t 4143.0 5198.0 2763.0 5394.0 151.0 2634.0 5.0 1.0 1054.0 0.0 21358.0 0.0 1230.0 740.0 13503.0 2533.0 3330.0 4228.0

MA0521.1_rc_shift3 (Tcf12_rc)
; oligos_8nt_mkv5_m34 versus MA0521.1_rc (Tcf12_rc); m=9/18; ncol2=11; w=9; offset=3; strand=R; shift=3; score=0.517754; ---cwsCAGCTGYy---- ; cor=; Ncor= a 0 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 0 0 c 0 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 0 0 g 0 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 0 0 t 0 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0 0 0

MA1485.1_shift2 (FERD3L)
; oligos_8nt_mkv5_m34 versus MA1485.1 (FERD3L); m=10/18; ncol2=14; w=10; offset=2; strand=D; shift=2; score=0.508265; --GyrmCAGCTGTyAC-- ; cor=; Ncor= a 0 0 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 0 0 c 0 0 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 0 0 g 0 0 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 0 0 t 0 0 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0 0 0

MA0691.1_shift4 (TFAP4)
; oligos_8nt_mkv5_m34 versus MA0691.1 (TFAP4); m=11/18; ncol2=10; w=8; offset=4; strand=D; shift=4; score=0.467661; ----AwCAGCTGwT---- ; cor=; Ncor= a 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 0 0 c 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 0 0 g 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 0 0 t 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0 0 0

MA0665.1_rc_shift4 (MSC_rc)
; oligos_8nt_mkv5_m34 versus MA0665.1_rc (MSC_rc); m=12/18; ncol2=10; w=8; offset=4; strand=R; shift=4; score=0.464267; ----AACAGCTGTT---- ; cor=; Ncor= a 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 0 0 c 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 0 0 g 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 0 0 t 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0 0 0

MA1472.1_rc_shift4 (BHLHA15(var.2)_rc)
; oligos_8nt_mkv5_m34 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=13/18; ncol2=10; w=8; offset=4; strand=R; shift=4; score=0.462778; ----rrCAGCTGbt---- ; cor=; Ncor= a 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 0 c 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 0 g 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 0 t 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0 0

MA0832.1_shift2 (Tcf21)
; oligos_8nt_mkv5_m34 versus MA0832.1 (Tcf21); m=14/18; ncol2=14; w=10; offset=2; strand=D; shift=2; score=0.461366; --ryAACAGCTGTTry-- ; cor=; Ncor= a 0 0 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 30.0 0 0 c 0 0 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 49.0 0 0 g 0 0 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 32.0 0 0 t 0 0 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0 60.0 0 0

MA1467.1_shift4 (ATOH1(var.2))
; oligos_8nt_mkv5_m34 versus MA1467.1 (ATOH1(var.2)); m=15/18; ncol2=10; w=8; offset=4; strand=D; shift=4; score=0.459512; ----AACAGCTGTY---- ; cor=; Ncor= a 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 0 0 0 c 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 0 0 0 g 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 0 0 0 t 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0 0 0 0

MA1619.1_rc_shift3 (Ptf1a(var.2)_rc)
; oligos_8nt_mkv5_m34 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=16/18; ncol2=12; w=9; offset=3; strand=R; shift=3; score=0.434067; ---rmaCAGCTGtky--- ; cor=; Ncor= a 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 0 0 0 c 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 0 0 0 g 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 0 0 0 t 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0 0 0 0

MA1641.1_rc_shift3 (MYF5_rc)
; oligos_8nt_mkv5_m34 versus MA1641.1_rc (MYF5_rc); m=17/18; ncol2=12; w=9; offset=3; strand=R; shift=3; score=0.433297; ---gvaCAGCTGtbc--- ; cor=; Ncor= a 0 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 0 0 c 0 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 0 0 g 0 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 0 0 t 0 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0 0 0

MA0667.1_shift4 (MYF6)
; oligos_8nt_mkv5_m34 versus MA0667.1 (MYF6); m=18/18; ncol2=10; w=8; offset=4; strand=D; shift=4; score=0.421225; ----AACArCTGTY---- ; cor=; Ncor= a 0 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 0 0 0 c 0 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 0 0 0 g 0 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 0 0 0 t 0 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_8nt_mkv5_m34_shift0 (oligos_8nt_mkv5_m34oligos_8nt_mkv5_m34)				; oligos_8nt_mkv5_m34 (oligos_8nt_mkv5_m34oligos_8nt_mkv5_m34); m=0 (reference); ncol1=12; shift=0; ncol=18; crGCAGCAGCtG------ ; Alignment reference a 110 224 1 0 565 1 1 560 1 0 121 45 0 0 0 0 0 0 c 263 81 0 578 9 2 580 13 2 584 66 51 0 0 0 0 0 0 g 121 173 583 6 10 580 2 11 579 0 71 442 0 0 0 0 0 0 t 90 106 0 0 0 1 1 0 2 0 326 46 0 0 0 0 0 0
MA0500.2_shift0 (MYOG)				; oligos_8nt_mkv5_m34 versus MA0500.2 (MYOG); m=1/18; ncol2=12; w=12; offset=0; strand=D; shift=0; score=0.732522; sarCAGCTGyts------ ; cor=; Ncor= a 5310.0 8428.0 7159.0 86.0 21782.0 95.0 167.0 163.0 182.0 1667.0 4667.0 5018.0 0 0 0 0 0 0 c 6381.0 3754.0 2730.0 21988.0 176.0 130.0 21964.0 238.0 102.0 10792.0 5497.0 5660.0 0 0 0 0 0 0 g 5596.0 5483.0 10790.0 101.0 236.0 21963.0 131.0 179.0 21985.0 2706.0 3718.0 6369.0 0 0 0 0 0 0 t 5070.0 4692.0 1678.0 182.0 163.0 169.0 95.0 21777.0 88.0 7192.0 8475.0 5310.0 0 0 0 0 0 0
MA1646.1_shift0 (OSR2)				; oligos_8nt_mkv5_m34 versus MA1646.1 (OSR2); m=2/18; ncol2=12; w=12; offset=0; strand=D; shift=0; score=0.713681; amaCAGAAGChr------ ; cor=; Ncor= a 4437.0 4244.0 8520.0 254.0 13599.0 216.0 11678.0 13725.0 416.0 666.0 4386.0 4048.0 0 0 0 0 0 0 c 3641.0 4206.0 2221.0 13937.0 197.0 229.0 703.0 288.0 170.0 12109.0 4274.0 3304.0 0 0 0 0 0 0 g 3246.0 3006.0 2117.0 406.0 737.0 14206.0 901.0 516.0 13982.0 841.0 2266.0 4726.0 0 0 0 0 0 0 t 3484.0 3352.0 1950.0 211.0 275.0 157.0 1526.0 279.0 240.0 1192.0 3882.0 2730.0 0 0 0 0 0 0
MA1628.1_shift1 (Zic1::Zic2)				; oligos_8nt_mkv5_m34 versus MA1628.1 (Zic1::Zic2); m=3/18; ncol2=11; w=11; offset=1; strand=D; shift=1; score=0.657841; -cvCAGCAGGsr------ ; cor=; Ncor= a 0 2072.0 3057.0 29.0 9238.0 96.0 75.0 8950.0 11.0 46.0 2429.0 2524.0 0 0 0 0 0 0 c 0 4620.0 2589.0 9594.0 384.0 195.0 9293.0 311.0 512.0 91.0 2516.0 2154.0 0 0 0 0 0 0 g 0 2206.0 2773.0 106.0 266.0 9527.0 96.0 627.0 9279.0 9631.0 2775.0 3506.0 0 0 0 0 0 0 t 0 994.0 1473.0 163.0 4.0 74.0 428.0 4.0 90.0 124.0 2172.0 1708.0 0 0 0 0 0 0
MA0816.1_rc_shift1 (Ascl2_rc)				; oligos_8nt_mkv5_m34 versus MA0816.1_rc (Ascl2_rc); m=4/18; ncol2=10; w=10; offset=1; strand=R; shift=1; score=0.646819; -rrCAGCTGyt------- ; cor=; Ncor= a 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 0 0 0 0 0 c 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 0 0 0 0 0 g 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 0 0 0 0 0 t 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0 0 0 0 0 0
MA0048.2_shift1 (NHLH1)				; oligos_8nt_mkv5_m34 versus MA0048.2 (NHLH1); m=5/18; ncol2=10; w=10; offset=1; strand=D; shift=1; score=0.628544; -cGCAGCTGCk------- ; cor=; Ncor= a 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 0 0 0 0 c 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 0 0 0 0 g 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 0 0 0 0 t 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0 0 0 0 0
MA1100.2_rc_shift1 (ASCL1_rc)				; oligos_8nt_mkv5_m34 versus MA1100.2_rc (ASCL1_rc); m=6/18; ncol2=10; w=10; offset=1; strand=R; shift=1; score=0.622828; -rgCAGCTGyy------- ; cor=; Ncor= a 0 1194.0 1349.0 29.0 4413.0 20.0 625.0 218.0 14.0 354.0 726.0 0 0 0 0 0 0 0 c 0 889.0 814.0 4413.0 121.0 1320.0 4413.0 60.0 0.0 3079.0 1495.0 0 0 0 0 0 0 0 g 0 1487.0 3065.0 0.0 24.0 4413.0 1288.0 157.0 4413.0 521.0 926.0 0 0 0 0 0 0 0 t 0 843.0 177.0 52.0 118.0 729.0 107.0 4413.0 0.0 1334.0 1267.0 0 0 0 0 0 0 0
MA1635.1_rc_shift1 (BHLHE22(var.2)_rc)				; oligos_8nt_mkv5_m34 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=7/18; ncol2=10; w=10; offset=1; strand=R; shift=1; score=0.588245; -csCAGCTGsg------- ; cor=; Ncor= a 0 3886.0 4449.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4402.0 0 0 0 0 0 0 0 c 0 5625.0 5112.0 18327.0 37.0 53.0 18288.0 52.0 11.0 7267.0 4447.0 0 0 0 0 0 0 0 g 0 4447.0 7269.0 15.0 52.0 18288.0 53.0 37.0 18331.0 5110.0 5621.0 0 0 0 0 0 0 0 t 0 4398.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4453.0 3886.0 0 0 0 0 0 0 0
MA1529.1_shift0 (NHLH2)				; oligos_8nt_mkv5_m34 versus MA1529.1 (NHLH2); m=8/18; ncol2=18; w=12; offset=0; strand=D; shift=0; score=0.521904; ggGyMGCAGCTGCGyCmc ; cor=; Ncor= a 4834.0 4312.0 3741.0 4921.0 5603.0 2378.0 2.0 21364.0 6.0 525.0 0.0 0.0 693.0 210.0 1184.0 3766.0 6392.0 3601.0 c 2655.0 2219.0 1065.0 6141.0 15451.0 2324.0 21359.0 0.0 2459.0 20268.0 14.0 2.0 20611.0 204.0 7207.0 18351.0 13462.0 11271.0 g 9732.0 13903.0 18450.0 4908.0 671.0 18930.0 2.0 26.0 20096.0 2266.0 3.0 21363.0 275.0 20977.0 1520.0 1183.0 1579.0 2264.0 t 4143.0 5198.0 2763.0 5394.0 151.0 2634.0 5.0 1.0 1054.0 0.0 21358.0 0.0 1230.0 740.0 13503.0 2533.0 3330.0 4228.0
MA0521.1_rc_shift3 (Tcf12_rc)				; oligos_8nt_mkv5_m34 versus MA0521.1_rc (Tcf12_rc); m=9/18; ncol2=11; w=9; offset=3; strand=R; shift=3; score=0.517754; ---cwsCAGCTGYy---- ; cor=; Ncor= a 0 0 0 2191.0 3642.0 1682.0 0.0 12895.0 0.0 0.0 0.0 0.0 0.0 17.0 0 0 0 0 c 0 0 0 4836.0 2925.0 3811.0 12895.0 0.0 1889.0 12887.0 0.0 0.0 3951.0 5123.0 0 0 0 0 g 0 0 0 3005.0 2416.0 5527.0 0.0 0.0 10822.0 0.0 0.0 12895.0 124.0 1585.0 0 0 0 0 t 0 0 0 2863.0 3912.0 1875.0 0.0 0.0 184.0 8.0 12895.0 0.0 8820.0 6170.0 0 0 0 0
MA1485.1_shift2 (FERD3L)				; oligos_8nt_mkv5_m34 versus MA1485.1 (FERD3L); m=10/18; ncol2=14; w=10; offset=2; strand=D; shift=2; score=0.508265; --GyrmCAGCTGTyAC-- ; cor=; Ncor= a 0 0 2158.0 450.0 14384.0 15390.0 36.0 29605.0 0.0 3649.0 81.0 0.0 1268.0 103.0 29605.0 0.0 0 0 c 0 0 68.0 20049.0 2443.0 9363.0 29605.0 126.0 841.0 29605.0 129.0 0.0 3878.0 8664.0 809.0 29605.0 0 0 g 0 0 29605.0 348.0 12703.0 3142.0 0.0 118.0 29605.0 471.0 210.0 29605.0 3395.0 5920.0 9815.0 0.0 0 0 t 0 0 225.0 9557.0 74.0 1710.0 0.0 144.0 4691.0 0.0 29605.0 0.0 21065.0 14919.0 958.0 48.0 0 0
MA0691.1_shift4 (TFAP4)				; oligos_8nt_mkv5_m34 versus MA0691.1 (TFAP4); m=11/18; ncol2=10; w=8; offset=4; strand=D; shift=4; score=0.467661; ----AwCAGCTGwT---- ; cor=; Ncor= a 0 0 0 0 3423.0 2159.0 0.0 3423.0 2.0 21.0 1.0 0.0 1810.0 299.0 0 0 0 0 c 0 0 0 0 500.0 546.0 3423.0 2.0 85.0 3423.0 1.0 1.0 114.0 682.0 0 0 0 0 g 0 0 0 0 337.0 62.0 0.0 0.0 3423.0 49.0 0.0 3423.0 333.0 433.0 0 0 0 0 t 0 0 0 0 228.0 1264.0 0.0 0.0 14.0 6.0 3423.0 0.0 1613.0 3423.0 0 0 0 0
MA0665.1_rc_shift4 (MSC_rc)				; oligos_8nt_mkv5_m34 versus MA0665.1_rc (MSC_rc); m=12/18; ncol2=10; w=8; offset=4; strand=R; shift=4; score=0.464267; ----AACAGCTGTT---- ; cor=; Ncor= a 0 0 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 0 0 c 0 0 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 0 0 g 0 0 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 0 0 t 0 0 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0 0 0
MA1472.1_rc_shift4 (BHLHA15(var.2)_rc)				; oligos_8nt_mkv5_m34 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=13/18; ncol2=10; w=8; offset=4; strand=R; shift=4; score=0.462778; ----rrCAGCTGbt---- ; cor=; Ncor= a 0 0 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 0 c 0 0 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 0 g 0 0 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 0 t 0 0 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0 0
MA0832.1_shift2 (Tcf21)				; oligos_8nt_mkv5_m34 versus MA0832.1 (Tcf21); m=14/18; ncol2=14; w=10; offset=2; strand=D; shift=2; score=0.461366; --ryAACAGCTGTTry-- ; cor=; Ncor= a 0 0 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 30.0 0 0 c 0 0 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 49.0 0 0 g 0 0 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 32.0 0 0 t 0 0 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0 60.0 0 0
MA1467.1_shift4 (ATOH1(var.2))				; oligos_8nt_mkv5_m34 versus MA1467.1 (ATOH1(var.2)); m=15/18; ncol2=10; w=8; offset=4; strand=D; shift=4; score=0.459512; ----AACAGCTGTY---- ; cor=; Ncor= a 0 0 0 0 1368.0 1008.0 0.0 1368.0 0.0 204.0 0.0 0.0 93.0 0.0 0 0 0 0 c 0 0 0 0 171.0 179.0 1368.0 0.0 0.0 1368.0 0.0 0.0 296.0 943.0 0 0 0 0 g 0 0 0 0 466.0 182.0 0.0 0.0 1368.0 0.0 0.0 1368.0 35.0 0.0 0 0 0 0 t 0 0 0 0 0.0 0.0 0.0 76.0 181.0 0.0 1368.0 0.0 944.0 426.0 0 0 0 0
MA1619.1_rc_shift3 (Ptf1a(var.2)_rc)				; oligos_8nt_mkv5_m34 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=16/18; ncol2=12; w=9; offset=3; strand=R; shift=3; score=0.434067; ---rmaCAGCTGtky--- ; cor=; Ncor= a 0 0 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 0 0 0 c 0 0 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 0 0 0 g 0 0 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 0 0 0 t 0 0 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0 0 0 0
MA1641.1_rc_shift3 (MYF5_rc)				; oligos_8nt_mkv5_m34 versus MA1641.1_rc (MYF5_rc); m=17/18; ncol2=12; w=9; offset=3; strand=R; shift=3; score=0.433297; ---gvaCAGCTGtbc--- ; cor=; Ncor= a 0 0 0 2697.0 3507.0 7489.0 95.0 10966.0 100.0 222.0 129.0 43.0 578.0 1572.0 2554.0 0 0 0 c 0 0 0 2701.0 2985.0 1368.0 10912.0 47.0 230.0 10658.0 69.0 161.0 1774.0 3145.0 3258.0 0 0 0 g 0 0 0 3258.0 3146.0 1775.0 161.0 68.0 10657.0 230.0 47.0 10911.0 1368.0 2986.0 2700.0 0 0 0 t 0 0 0 2554.0 1572.0 578.0 42.0 129.0 223.0 100.0 10965.0 95.0 7490.0 3507.0 2698.0 0 0 0
MA0667.1_shift4 (MYF6)				; oligos_8nt_mkv5_m34 versus MA0667.1 (MYF6); m=18/18; ncol2=10; w=8; offset=4; strand=D; shift=4; score=0.421225; ----AACArCTGTY---- ; cor=; Ncor= a 0 0 0 0 444.0 444.0 0.0 444.0 159.0 12.0 11.0 0.0 2.0 0.0 0 0 0 0 c 0 0 0 0 12.0 18.0 444.0 3.0 30.0 353.0 0.0 2.0 22.0 159.0 0 0 0 0 g 0 0 0 0 70.0 24.0 0.0 7.0 256.0 35.0 0.0 444.0 0.0 7.0 0 0 0 0 t 0 0 0 0 7.0 1.0 0.0 0.0 12.0 56.0 444.0 0.0 444.0 444.0 0 0 0 0