One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m43/peak-motifs_oligos_8nt_mkv5_m43.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m43/peak-motifs_oligos_8nt_mkv5_m43_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv5_m43_shift3 ; 25 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_8nt_mkv5_m43_shift3 (oligos_8nt_mkv5_m43oligos_8nt_mkv5_m43)
; oligos_8nt_mkv5_m43 (oligos_8nt_mkv5_m43oligos_8nt_mkv5_m43); m=0 (reference); ncol1=12; shift=3; ncol=15; ---rCAGCTGGTGss ; Alignment reference a 0 0 0 70 15 227 0 2 2 0 0 0 1 46 40 c 0 0 0 51 172 2 3 223 3 1 0 4 0 62 74 g 0 0 0 83 33 0 223 1 4 228 228 2 228 70 70 t 0 0 0 25 9 0 3 3 220 0 1 223 0 51 45

MA1648.1_rc_shift4 (TCF12(var.2)_rc)
; oligos_8nt_mkv5_m43 versus MA1648.1_rc (TCF12(var.2)_rc); m=1/24; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.688962; ----srGCAGGTGss ; cor=; Ncor= a 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 c 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 g 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 t 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0

MA0522.3_rc_shift4 (TCF3_rc)
; oligos_8nt_mkv5_m43 versus MA0522.3_rc (TCF3_rc); m=2/24; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.680551; ----ssGCAGGTGbs ; cor=; Ncor= a 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 c 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 g 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 t 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0

MA1631.1_rc_shift3 (ASCL1(var.2)_rc)
; oligos_8nt_mkv5_m43 versus MA1631.1_rc (ASCL1(var.2)_rc); m=3/24; ncol2=13; w=12; offset=0; strand=R; shift=3; score=0.66151; ---gsrGCAGGTGch ; cor=; Ncor= a 0 0 0 8032.0 7779.0 9017.0 2394.0 249.0 32756.0 151.0 815.0 618.0 289.0 3290.0 8805.0 c 0 0 0 8356.0 8939.0 2966.0 2719.0 33411.0 492.0 607.0 3209.0 860.0 321.0 18576.0 8601.0 g 0 0 0 11996.0 10555.0 17883.0 28844.0 445.0 740.0 33402.0 30169.0 563.0 33562.0 6654.0 7998.0 t 0 0 0 5972.0 7083.0 4490.0 399.0 251.0 368.0 196.0 163.0 32315.0 184.0 5836.0 8952.0

MA0091.1_rc_shift2 (TAL1::TCF3_rc)
; oligos_8nt_mkv5_m43 versus MA0091.1_rc (TAL1::TCF3_rc); m=4/24; ncol2=12; w=11; offset=-1; strand=R; shift=2; score=0.639078; --AmCAKMTGkTck- ; cor=; Ncor= a 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 9.0 0 c 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 8.0 0 g 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 14.0 0 t 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0 13.0 0

MA0521.1_shift2 (Tcf12)
; oligos_8nt_mkv5_m43 versus MA0521.1 (Tcf12); m=5/24; ncol2=11; w=10; offset=-1; strand=D; shift=2; score=0.61688; --rRCAGCTGswg-- ; cor=; Ncor= a 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 0 c 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 0 g 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 0 t 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0 0

MA1558.1_shift5 (SNAI1)
; oligos_8nt_mkv5_m43 versus MA1558.1 (SNAI1); m=6/24; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.597094; -----drCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 5274.0 6993.0 446.0 19982.0 1766.0 72.0 38.0 706.0 1639.0 10088.0 c 0 0 0 0 0 3187.0 501.0 19982.0 297.0 517.0 5.0 0.0 0.0 10938.0 4592.0 g 0 0 0 0 0 6410.0 12989.0 275.0 91.0 19982.0 19982.0 42.0 19982.0 5306.0 9894.0 t 0 0 0 0 0 5112.0 3518.0 340.0 568.0 306.0 28.0 19982.0 311.0 9044.0 6356.0

MA1472.1_rc_shift2 (BHLHA15(var.2)_rc)
; oligos_8nt_mkv5_m43 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=7/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.59172; --rrCAGCTGbt--- ; cor=; Ncor= a 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 c 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 g 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 t 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0

MA0816.1_rc_shift2 (Ascl2_rc)
; oligos_8nt_mkv5_m43 versus MA0816.1_rc (Ascl2_rc); m=8/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.590129; --rrCAGCTGyt--- ; cor=; Ncor= a 0 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 0 c 0 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 0 g 0 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 0 t 0 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0 0

MA0691.1_rc_shift2 (TFAP4_rc)
; oligos_8nt_mkv5_m43 versus MA0691.1_rc (TFAP4_rc); m=9/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.589994; --AwCAGCTGwT--- ; cor=; Ncor= a 0 0 3423.0 1613.0 0.0 3423.0 6.0 14.0 0.0 0.0 1264.0 228.0 0 0 0 c 0 0 433.0 333.0 3423.0 0.0 49.0 3423.0 0.0 0.0 62.0 337.0 0 0 0 g 0 0 682.0 114.0 1.0 1.0 3423.0 85.0 2.0 3423.0 546.0 500.0 0 0 0 t 0 0 299.0 1810.0 0.0 1.0 21.0 2.0 3423.0 0.0 2159.0 3423.0 0 0 0

MA1485.1_rc_shift0 (FERD3L_rc)
; oligos_8nt_mkv5_m43 versus MA1485.1_rc (FERD3L_rc); m=10/24; ncol2=14; w=11; offset=-3; strand=R; shift=0; score=0.58709; GTrACAGCTGkyrC- ; cor=; Ncor= a 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 225.0 0 c 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 29605.0 0 g 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 68.0 0 t 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0 2158.0 0

MA1635.1_shift2 (BHLHE22(var.2))
; oligos_8nt_mkv5_m43 versus MA1635.1 (BHLHE22(var.2)); m=11/24; ncol2=10; w=9; offset=-1; strand=D; shift=2; score=0.581777; --csCAGCTGsg--- ; cor=; Ncor= a 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 0 c 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 0 g 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 0 t 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0 0

MA0832.1_shift0 (Tcf21)
; oligos_8nt_mkv5_m43 versus MA0832.1 (Tcf21); m=12/24; ncol2=14; w=11; offset=-3; strand=D; shift=0; score=0.574059; ryAACAGCTGTTry- ; cor=; Ncor= a 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 30.0 0 c 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 49.0 0 g 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 32.0 0 t 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0 60.0 0

MA1467.1_rc_shift2 (ATOH1(var.2)_rc)
; oligos_8nt_mkv5_m43 versus MA1467.1_rc (ATOH1(var.2)_rc); m=13/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.572077; --RACAGCTGTT--- ; cor=; Ncor= a 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 c 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 g 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 t 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0

MA0665.1_rc_shift2 (MSC_rc)
; oligos_8nt_mkv5_m43 versus MA0665.1_rc (MSC_rc); m=14/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.564839; --AACAGCTGTT--- ; cor=; Ncor= a 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 0 c 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 0 g 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 0 t 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0 0

MA0500.2_rc_shift1 (MYOG_rc)
; oligos_8nt_mkv5_m43 versus MA0500.2_rc (MYOG_rc); m=15/24; ncol2=12; w=10; offset=-2; strand=R; shift=1; score=0.561942; -sarCAGCTGyts-- ; cor=; Ncor= a 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 0 c 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 0 g 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 0 t 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0 0

MA1109.1_shift1 (NEUROD1)
; oligos_8nt_mkv5_m43 versus MA1109.1 (NEUROD1); m=16/24; ncol2=13; w=11; offset=-2; strand=D; shift=1; score=0.553564; -graCAGATGGyrs- ; cor=; Ncor= a 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 538.0 0 c 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 591.0 0 g 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 628.0 0 t 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0 525.0 0

MA1628.1_shift2 (Zic1::Zic2)
; oligos_8nt_mkv5_m43 versus MA1628.1 (Zic1::Zic2); m=17/24; ncol2=11; w=10; offset=-1; strand=D; shift=2; score=0.549196; --cvCAGCAGGsr-- ; cor=; Ncor= a 0 0 2072.0 3057.0 29.0 9238.0 96.0 75.0 8950.0 11.0 46.0 2429.0 2524.0 0 0 c 0 0 4620.0 2589.0 9594.0 384.0 195.0 9293.0 311.0 512.0 91.0 2516.0 2154.0 0 0 g 0 0 2206.0 2773.0 106.0 266.0 9527.0 96.0 627.0 9279.0 9631.0 2775.0 3506.0 0 0 t 0 0 994.0 1473.0 163.0 4.0 74.0 428.0 4.0 90.0 124.0 2172.0 1708.0 0 0

MA0820.1_rc_shift2 (FIGLA_rc)
; oligos_8nt_mkv5_m43 versus MA0820.1_rc (FIGLA_rc); m=18/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.535726; --wmCAGGTGkw--- ; cor=; Ncor= a 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 0 0 c 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 0 0 g 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 0 0 t 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0 0 0

MA1619.1_rc_shift1 (Ptf1a(var.2)_rc)
; oligos_8nt_mkv5_m43 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=19/24; ncol2=12; w=10; offset=-2; strand=R; shift=1; score=0.535277; -rmaCAGCTGtky-- ; cor=; Ncor= a 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 0 0 c 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 0 0 g 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 0 0 t 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0 0 0

MA1100.2_shift2 (ASCL1)
; oligos_8nt_mkv5_m43 versus MA1100.2 (ASCL1); m=20/24; ncol2=10; w=9; offset=-1; strand=D; shift=2; score=0.533017; --rrCAGCTGcy--- ; cor=; Ncor= a 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 0 c 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 0 g 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 0 t 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0 0

MA1641.1_shift1 (MYF5)
; oligos_8nt_mkv5_m43 versus MA1641.1 (MYF5); m=21/24; ncol2=12; w=10; offset=-2; strand=D; shift=1; score=0.529773; -gvaCAGCTGtbc-- ; cor=; Ncor= a 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 0 0 c 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 0 0 g 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 0 0 t 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0 0 0

MA0048.2_shift2 (NHLH1)
; oligos_8nt_mkv5_m43 versus MA0048.2 (NHLH1); m=22/24; ncol2=10; w=9; offset=-1; strand=D; shift=2; score=0.523947; --cGCAGCTGCk--- ; cor=; Ncor= a 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 c 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 g 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 t 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0

MA1629.1_shift0 (Zic2)
; oligos_8nt_mkv5_m43 versus MA1629.1 (Zic2); m=23/24; ncol2=14; w=11; offset=-3; strand=D; shift=0; score=0.521257; mkCaCAGCAGGrrg- ; cor=; Ncor= a 3145.0 2450.0 1161.0 6888.0 135.0 11074.0 140.0 80.0 10625.0 192.0 96.0 3060.0 3638.0 2333.0 0 c 3507.0 1755.0 9933.0 1765.0 11476.0 391.0 228.0 11272.0 118.0 133.0 204.0 1476.0 1661.0 2168.0 0 g 2761.0 3821.0 585.0 829.0 188.0 186.0 11484.0 269.0 735.0 11184.0 11465.0 4911.0 4979.0 5314.0 0 t 2506.0 3893.0 240.0 2437.0 120.0 268.0 67.0 298.0 441.0 410.0 154.0 2472.0 1641.0 2104.0 0

MA0667.1_rc_shift2 (MYF6_rc)
; oligos_8nt_mkv5_m43 versus MA0667.1_rc (MYF6_rc); m=24/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.509199; --RACAGyTGTT--- ; cor=; Ncor= a 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 0 0 c 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 0 0 g 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 0 0 t 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_8nt_mkv5_m43_shift3 (oligos_8nt_mkv5_m43oligos_8nt_mkv5_m43)				; oligos_8nt_mkv5_m43 (oligos_8nt_mkv5_m43oligos_8nt_mkv5_m43); m=0 (reference); ncol1=12; shift=3; ncol=15; ---rCAGCTGGTGss ; Alignment reference a 0 0 0 70 15 227 0 2 2 0 0 0 1 46 40 c 0 0 0 51 172 2 3 223 3 1 0 4 0 62 74 g 0 0 0 83 33 0 223 1 4 228 228 2 228 70 70 t 0 0 0 25 9 0 3 3 220 0 1 223 0 51 45
MA1648.1_rc_shift4 (TCF12(var.2)_rc)				; oligos_8nt_mkv5_m43 versus MA1648.1_rc (TCF12(var.2)_rc); m=1/24; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.688962; ----srGCAGGTGss ; cor=; Ncor= a 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 c 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 g 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 t 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0
MA0522.3_rc_shift4 (TCF3_rc)				; oligos_8nt_mkv5_m43 versus MA0522.3_rc (TCF3_rc); m=2/24; ncol2=11; w=11; offset=1; strand=R; shift=4; score=0.680551; ----ssGCAGGTGbs ; cor=; Ncor= a 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 c 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 g 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 t 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0
MA1631.1_rc_shift3 (ASCL1(var.2)_rc)				; oligos_8nt_mkv5_m43 versus MA1631.1_rc (ASCL1(var.2)_rc); m=3/24; ncol2=13; w=12; offset=0; strand=R; shift=3; score=0.66151; ---gsrGCAGGTGch ; cor=; Ncor= a 0 0 0 8032.0 7779.0 9017.0 2394.0 249.0 32756.0 151.0 815.0 618.0 289.0 3290.0 8805.0 c 0 0 0 8356.0 8939.0 2966.0 2719.0 33411.0 492.0 607.0 3209.0 860.0 321.0 18576.0 8601.0 g 0 0 0 11996.0 10555.0 17883.0 28844.0 445.0 740.0 33402.0 30169.0 563.0 33562.0 6654.0 7998.0 t 0 0 0 5972.0 7083.0 4490.0 399.0 251.0 368.0 196.0 163.0 32315.0 184.0 5836.0 8952.0
MA0091.1_rc_shift2 (TAL1::TCF3_rc)				; oligos_8nt_mkv5_m43 versus MA0091.1_rc (TAL1::TCF3_rc); m=4/24; ncol2=12; w=11; offset=-1; strand=R; shift=2; score=0.639078; --AmCAKMTGkTck- ; cor=; Ncor= a 0 0 34.0 21.0 1.0 44.0 0.0 32.0 0.0 0.0 0.0 2.0 5.0 9.0 0 c 0 0 2.0 20.0 43.0 0.0 0.0 11.0 0.0 1.0 0.0 3.0 20.0 8.0 0 g 0 0 4.0 3.0 0.0 0.0 32.0 1.0 0.0 43.0 24.0 0.0 10.0 14.0 0 t 0 0 4.0 0.0 0.0 0.0 12.0 0.0 44.0 0.0 20.0 39.0 9.0 13.0 0
MA0521.1_shift2 (Tcf12)				; oligos_8nt_mkv5_m43 versus MA0521.1 (Tcf12); m=5/24; ncol2=11; w=10; offset=-1; strand=D; shift=2; score=0.61688; --rRCAGCTGswg-- ; cor=; Ncor= a 0 0 6170.0 8820.0 0.0 12895.0 8.0 184.0 0.0 0.0 1875.0 3912.0 2863.0 0 0 c 0 0 1585.0 124.0 12895.0 0.0 0.0 10822.0 0.0 0.0 5527.0 2416.0 3005.0 0 0 g 0 0 5123.0 3951.0 0.0 0.0 12887.0 1889.0 0.0 12895.0 3811.0 2925.0 4836.0 0 0 t 0 0 17.0 0.0 0.0 0.0 0.0 0.0 12895.0 0.0 1682.0 3642.0 2191.0 0 0
MA1558.1_shift5 (SNAI1)				; oligos_8nt_mkv5_m43 versus MA1558.1 (SNAI1); m=6/24; ncol2=10; w=10; offset=2; strand=D; shift=5; score=0.597094; -----drCAGGTGyr ; cor=; Ncor= a 0 0 0 0 0 5274.0 6993.0 446.0 19982.0 1766.0 72.0 38.0 706.0 1639.0 10088.0 c 0 0 0 0 0 3187.0 501.0 19982.0 297.0 517.0 5.0 0.0 0.0 10938.0 4592.0 g 0 0 0 0 0 6410.0 12989.0 275.0 91.0 19982.0 19982.0 42.0 19982.0 5306.0 9894.0 t 0 0 0 0 0 5112.0 3518.0 340.0 568.0 306.0 28.0 19982.0 311.0 9044.0 6356.0
MA1472.1_rc_shift2 (BHLHA15(var.2)_rc)				; oligos_8nt_mkv5_m43 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=7/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.59172; --rrCAGCTGbt--- ; cor=; Ncor= a 0 0 577.0 1015.0 0.0 1504.0 11.0 467.0 137.0 33.0 81.0 170.0 0 0 0 c 0 0 316.0 489.0 1504.0 0.0 72.0 1504.0 33.0 6.0 591.0 357.0 0 0 0 g 0 0 410.0 610.0 0.0 4.0 1504.0 30.0 33.0 1504.0 607.0 281.0 0 0 0 t 0 0 202.0 54.0 0.0 54.0 445.0 11.0 1504.0 47.0 897.0 697.0 0 0 0
MA0816.1_rc_shift2 (Ascl2_rc)				; oligos_8nt_mkv5_m43 versus MA0816.1_rc (Ascl2_rc); m=8/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.590129; --rrCAGCTGyt--- ; cor=; Ncor= a 0 0 199.0 94.0 2.0 300.0 1.0 18.0 15.0 1.0 1.0 16.0 0 0 0 c 0 0 28.0 15.0 300.0 0.0 2.0 300.0 0.0 0.0 172.0 63.0 0 0 0 g 0 0 101.0 206.0 1.0 0.0 300.0 23.0 0.0 300.0 41.0 36.0 0 0 0 t 0 0 34.0 6.0 0.0 4.0 3.0 7.0 300.0 3.0 128.0 237.0 0 0 0
MA0691.1_rc_shift2 (TFAP4_rc)				; oligos_8nt_mkv5_m43 versus MA0691.1_rc (TFAP4_rc); m=9/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.589994; --AwCAGCTGwT--- ; cor=; Ncor= a 0 0 3423.0 1613.0 0.0 3423.0 6.0 14.0 0.0 0.0 1264.0 228.0 0 0 0 c 0 0 433.0 333.0 3423.0 0.0 49.0 3423.0 0.0 0.0 62.0 337.0 0 0 0 g 0 0 682.0 114.0 1.0 1.0 3423.0 85.0 2.0 3423.0 546.0 500.0 0 0 0 t 0 0 299.0 1810.0 0.0 1.0 21.0 2.0 3423.0 0.0 2159.0 3423.0 0 0 0
MA1485.1_rc_shift0 (FERD3L_rc)				; oligos_8nt_mkv5_m43 versus MA1485.1_rc (FERD3L_rc); m=10/24; ncol2=14; w=11; offset=-3; strand=R; shift=0; score=0.58709; GTrACAGCTGkyrC- ; cor=; Ncor= a 48.0 958.0 14919.0 21065.0 0.0 29605.0 0.0 4691.0 144.0 0.0 1710.0 74.0 9557.0 225.0 0 c 0.0 9815.0 5920.0 3395.0 29605.0 210.0 471.0 29605.0 118.0 0.0 3142.0 12703.0 348.0 29605.0 0 g 29605.0 809.0 8664.0 3878.0 0.0 129.0 29605.0 841.0 126.0 29605.0 9363.0 2443.0 20049.0 68.0 0 t 0.0 29605.0 103.0 1268.0 0.0 81.0 3649.0 0.0 29605.0 36.0 15390.0 14384.0 450.0 2158.0 0
MA1635.1_shift2 (BHLHE22(var.2))				; oligos_8nt_mkv5_m43 versus MA1635.1 (BHLHE22(var.2)); m=11/24; ncol2=10; w=9; offset=-1; strand=D; shift=2; score=0.581777; --csCAGCTGsg--- ; cor=; Ncor= a 0 0 3886.0 4453.0 0.0 18267.0 1.0 14.0 0.0 14.0 1526.0 4398.0 0 0 0 c 0 0 5621.0 5110.0 18331.0 37.0 53.0 18288.0 52.0 15.0 7269.0 4447.0 0 0 0 g 0 0 4447.0 7267.0 11.0 52.0 18288.0 53.0 37.0 18327.0 5112.0 5625.0 0 0 0 t 0 0 4402.0 1526.0 14.0 0.0 14.0 1.0 18267.0 0.0 4449.0 3886.0 0 0 0
MA0832.1_shift0 (Tcf21)				; oligos_8nt_mkv5_m43 versus MA0832.1 (Tcf21); m=12/24; ncol2=14; w=11; offset=-3; strand=D; shift=0; score=0.574059; ryAACAGCTGTTry- ; cor=; Ncor= a 55.0 28.0 171.0 171.0 0.0 171.0 0.0 0.0 0.0 0.0 0.0 5.0 50.0 30.0 0 c 29.0 76.0 1.0 10.0 171.0 1.0 0.0 171.0 0.0 0.0 4.0 23.0 23.0 49.0 0 g 70.0 22.0 23.0 0.0 0.0 0.0 171.0 1.0 0.0 171.0 20.0 0.0 80.0 32.0 0 t 17.0 46.0 3.0 0.0 0.0 0.0 2.0 1.0 171.0 0.0 171.0 171.0 19.0 60.0 0
MA1467.1_rc_shift2 (ATOH1(var.2)_rc)				; oligos_8nt_mkv5_m43 versus MA1467.1_rc (ATOH1(var.2)_rc); m=13/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.572077; --RACAGCTGTT--- ; cor=; Ncor= a 0 0 426.0 944.0 0.0 1368.0 0.0 181.0 76.0 0.0 0.0 0.0 0 0 0 c 0 0 0.0 35.0 1368.0 0.0 0.0 1368.0 0.0 0.0 182.0 466.0 0 0 0 g 0 0 943.0 296.0 0.0 0.0 1368.0 0.0 0.0 1368.0 179.0 171.0 0 0 0 t 0 0 0.0 93.0 0.0 0.0 204.0 0.0 1368.0 0.0 1008.0 1368.0 0 0 0
MA0665.1_rc_shift2 (MSC_rc)				; oligos_8nt_mkv5_m43 versus MA0665.1_rc (MSC_rc); m=14/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.564839; --AACAGCTGTT--- ; cor=; Ncor= a 0 0 69.0 69.0 4.0 69.0 0.0 0.0 0.0 1.0 0.0 7.0 0 0 0 c 0 0 4.0 4.0 69.0 0.0 3.0 69.0 0.0 3.0 3.0 18.0 0 0 0 g 0 0 9.0 10.0 0.0 0.0 69.0 12.0 0.0 69.0 12.0 0.0 0 0 0 t 0 0 0.0 3.0 0.0 0.0 0.0 0.0 69.0 0.0 69.0 69.0 0 0 0
MA0500.2_rc_shift1 (MYOG_rc)				; oligos_8nt_mkv5_m43 versus MA0500.2_rc (MYOG_rc); m=15/24; ncol2=12; w=10; offset=-2; strand=R; shift=1; score=0.561942; -sarCAGCTGyts-- ; cor=; Ncor= a 0 5310.0 8475.0 7192.0 88.0 21777.0 95.0 169.0 163.0 182.0 1678.0 4692.0 5070.0 0 0 c 0 6369.0 3718.0 2706.0 21985.0 179.0 131.0 21963.0 236.0 101.0 10790.0 5483.0 5596.0 0 0 g 0 5660.0 5497.0 10792.0 102.0 238.0 21964.0 130.0 176.0 21988.0 2730.0 3754.0 6381.0 0 0 t 0 5018.0 4667.0 1667.0 182.0 163.0 167.0 95.0 21782.0 86.0 7159.0 8428.0 5310.0 0 0
MA1109.1_shift1 (NEUROD1)				; oligos_8nt_mkv5_m43 versus MA1109.1 (NEUROD1); m=16/24; ncol2=13; w=11; offset=-2; strand=D; shift=1; score=0.553564; -graCAGATGGyrs- ; cor=; Ncor= a 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 538.0 0 c 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 591.0 0 g 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 628.0 0 t 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0 525.0 0
MA1628.1_shift2 (Zic1::Zic2)				; oligos_8nt_mkv5_m43 versus MA1628.1 (Zic1::Zic2); m=17/24; ncol2=11; w=10; offset=-1; strand=D; shift=2; score=0.549196; --cvCAGCAGGsr-- ; cor=; Ncor= a 0 0 2072.0 3057.0 29.0 9238.0 96.0 75.0 8950.0 11.0 46.0 2429.0 2524.0 0 0 c 0 0 4620.0 2589.0 9594.0 384.0 195.0 9293.0 311.0 512.0 91.0 2516.0 2154.0 0 0 g 0 0 2206.0 2773.0 106.0 266.0 9527.0 96.0 627.0 9279.0 9631.0 2775.0 3506.0 0 0 t 0 0 994.0 1473.0 163.0 4.0 74.0 428.0 4.0 90.0 124.0 2172.0 1708.0 0 0
MA0820.1_rc_shift2 (FIGLA_rc)				; oligos_8nt_mkv5_m43 versus MA0820.1_rc (FIGLA_rc); m=18/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.535726; --wmCAGGTGkw--- ; cor=; Ncor= a 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 0 0 c 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 0 0 g 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 0 0 t 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0 0 0
MA1619.1_rc_shift1 (Ptf1a(var.2)_rc)				; oligos_8nt_mkv5_m43 versus MA1619.1_rc (Ptf1a(var.2)_rc); m=19/24; ncol2=12; w=10; offset=-2; strand=R; shift=1; score=0.535277; -rmaCAGCTGtky-- ; cor=; Ncor= a 0 1871.0 1974.0 4341.0 49.0 7121.0 33.0 223.0 28.0 27.0 529.0 1216.0 1607.0 0 0 c 0 1803.0 2426.0 1065.0 7150.0 40.0 299.0 6689.0 65.0 28.0 1308.0 1629.0 1974.0 0 0 g 0 1977.0 1632.0 1312.0 27.0 66.0 6697.0 307.0 41.0 7149.0 1070.0 2430.0 1803.0 0 0 t 0 1602.0 1221.0 535.0 27.0 26.0 224.0 34.0 7119.0 49.0 4346.0 1978.0 1869.0 0 0
MA1100.2_shift2 (ASCL1)				; oligos_8nt_mkv5_m43 versus MA1100.2 (ASCL1); m=20/24; ncol2=10; w=9; offset=-1; strand=D; shift=2; score=0.533017; --rrCAGCTGcy--- ; cor=; Ncor= a 0 0 1267.0 1334.0 0.0 4413.0 107.0 729.0 118.0 52.0 177.0 843.0 0 0 0 c 0 0 926.0 521.0 4413.0 157.0 1288.0 4413.0 24.0 0.0 3065.0 1487.0 0 0 0 g 0 0 1495.0 3079.0 0.0 60.0 4413.0 1320.0 121.0 4413.0 814.0 889.0 0 0 0 t 0 0 726.0 354.0 14.0 218.0 625.0 20.0 4413.0 29.0 1349.0 1194.0 0 0 0
MA1641.1_shift1 (MYF5)				; oligos_8nt_mkv5_m43 versus MA1641.1 (MYF5); m=21/24; ncol2=12; w=10; offset=-2; strand=D; shift=1; score=0.529773; -gvaCAGCTGtbc-- ; cor=; Ncor= a 0 2698.0 3507.0 7490.0 95.0 10965.0 100.0 223.0 129.0 42.0 578.0 1572.0 2554.0 0 0 c 0 2700.0 2986.0 1368.0 10911.0 47.0 230.0 10657.0 68.0 161.0 1775.0 3146.0 3258.0 0 0 g 0 3258.0 3145.0 1774.0 161.0 69.0 10658.0 230.0 47.0 10912.0 1368.0 2985.0 2701.0 0 0 t 0 2554.0 1572.0 578.0 43.0 129.0 222.0 100.0 10966.0 95.0 7489.0 3507.0 2697.0 0 0
MA0048.2_shift2 (NHLH1)				; oligos_8nt_mkv5_m43 versus MA0048.2 (NHLH1); m=22/24; ncol2=10; w=9; offset=-1; strand=D; shift=2; score=0.523947; --cGCAGCTGCk--- ; cor=; Ncor= a 0 0 788.0 461.0 3.0 2166.0 0.0 96.0 0.0 2.0 296.0 308.0 0 0 0 c 0 0 2166.0 179.0 2166.0 3.0 301.0 2166.0 4.0 4.0 2166.0 736.0 0 0 0 g 0 0 181.0 2166.0 0.0 1.0 2166.0 124.0 4.0 2166.0 102.0 2166.0 0 0 0 t 0 0 111.0 142.0 0.0 0.0 114.0 0.0 2166.0 1.0 350.0 1489.0 0 0 0
MA1629.1_shift0 (Zic2)				; oligos_8nt_mkv5_m43 versus MA1629.1 (Zic2); m=23/24; ncol2=14; w=11; offset=-3; strand=D; shift=0; score=0.521257; mkCaCAGCAGGrrg- ; cor=; Ncor= a 3145.0 2450.0 1161.0 6888.0 135.0 11074.0 140.0 80.0 10625.0 192.0 96.0 3060.0 3638.0 2333.0 0 c 3507.0 1755.0 9933.0 1765.0 11476.0 391.0 228.0 11272.0 118.0 133.0 204.0 1476.0 1661.0 2168.0 0 g 2761.0 3821.0 585.0 829.0 188.0 186.0 11484.0 269.0 735.0 11184.0 11465.0 4911.0 4979.0 5314.0 0 t 2506.0 3893.0 240.0 2437.0 120.0 268.0 67.0 298.0 441.0 410.0 154.0 2472.0 1641.0 2104.0 0
MA0667.1_rc_shift2 (MYF6_rc)				; oligos_8nt_mkv5_m43 versus MA0667.1_rc (MYF6_rc); m=24/24; ncol2=10; w=9; offset=-1; strand=R; shift=2; score=0.509199; --RACAGyTGTT--- ; cor=; Ncor= a 0 0 444.0 444.0 0.0 444.0 56.0 12.0 0.0 0.0 1.0 7.0 0 0 0 c 0 0 7.0 0.0 444.0 0.0 35.0 256.0 7.0 0.0 24.0 70.0 0 0 0 g 0 0 159.0 22.0 2.0 0.0 353.0 30.0 3.0 444.0 18.0 12.0 0 0 0 t 0 0 0.0 2.0 0.0 11.0 12.0 159.0 444.0 0.0 444.0 444.0 0 0 0