One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m7/peak-motifs_oligos_8nt_mkv5_m7.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/oligos_8nt_mkv5_m7/peak-motifs_oligos_8nt_mkv5_m7_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_8nt_mkv5_m7_shift2 ; 51 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
oligos_8nt_mkv5_m7_shift2 (oligos_8nt_mkv5_m7oligos_8nt_mkv5_m7)     
; oligos_8nt_mkv5_m7 (oligos_8nt_mkv5_m7oligos_8nt_mkv5_m7); m=0 (reference); ncol1=14; shift=2; ncol=19; --bsACASCTGTCAsy---
; Alignment reference
a	0	0	46	68	225	1	310	5	1	2	0	7	1	279	29	61	0	0	0
c	0	0	98	107	41	310	1	218	306	1	1	18	293	11	122	107	0	0	0
g	0	0	85	88	35	1	0	88	1	0	311	6	8	6	88	59	0	0	0
t	0	0	83	49	11	0	1	1	4	309	0	281	10	16	73	85	0	0	0
MA0499.2_shift2 (MYOD1) 
; oligos_8nt_mkv5_m7 versus MA0499.2 (MYOD1); m=1/50; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.812926; --cwgCACCTGTymy----
; cor=; Ncor=
a	0	0	7175.0	9462.0	4549.0	349.0	32281.0	463.0	534.0	241.0	208.0	402.0	1808.0	9462.0	5687.0	0	0	0	0
c	0	0	11279.0	7103.0	5622.0	33328.0	583.0	25275.0	32504.0	563.0	386.0	2555.0	19052.0	10485.0	11760.0	0	0	0	0
g	0	0	8118.0	8444.0	21884.0	354.0	849.0	7336.0	932.0	366.0	33468.0	1699.0	4440.0	6202.0	7495.0	0	0	0	0
t	0	0	7728.0	9291.0	2245.0	269.0	587.0	1226.0	330.0	33130.0	238.0	29644.0	9000.0	8151.0	9358.0	0	0	0	0
MA0745.2_shift2 (SNAI2) 
; oligos_8nt_mkv5_m7 versus MA0745.2 (SNAI2); m=2/50; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.794564; --aygCACCTGTmry----
; cor=; Ncor=
a	0	0	14658.0	7668.0	10322.0	408.0	44963.0	112.0	246.0	78.0	179.0	814.0	12017.0	13586.0	6215.0	0	0	0	0
c	0	0	10031.0	12314.0	6393.0	44463.0	202.0	45144.0	44739.0	313.0	254.0	6467.0	18771.0	11016.0	13476.0	0	0	0	0
g	0	0	11169.0	9490.0	26742.0	323.0	424.0	326.0	487.0	196.0	45257.0	1263.0	6281.0	12297.0	8219.0	0	0	0	0
t	0	0	9958.0	16344.0	2359.0	622.0	227.0	234.0	344.0	45229.0	126.0	37272.0	8747.0	8917.0	17906.0	0	0	0	0
MA0783.1_rc_shift2 (PKNOX2_rc) 
; oligos_8nt_mkv5_m7 versus MA0783.1_rc (PKNOX2_rc); m=3/50; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.775407; --TGACAsCTGTCA-----
; cor=; Ncor=
a	0	0	9.0	3.0	1167.0	0.0	1204.0	0.0	118.0	4.0	9.0	6.0	0.0	1192.0	0	0	0	0	0
c	0	0	21.0	6.0	5.0	1370.0	0.0	702.0	1298.0	1.0	0.0	13.0	1389.0	9.0	0	0	0	0	0
g	0	0	1.0	1265.0	29.0	1.0	4.0	304.0	0.0	0.0	1250.0	3.0	6.0	0.0	0	0	0	0	0
t	0	0	1190.0	11.0	10.0	3.0	0.0	39.0	7.0	1169.0	0.0	1124.0	1.0	37.0	0	0	0	0	0
MA1621.1_shift1 (Rbpjl) 
; oligos_8nt_mkv5_m7 versus MA1621.1 (Rbpjl); m=4/50; ncol2=14; w=13; offset=-1; strand=D; shift=1; score=0.764412; -svmaCACCTGtsyc----
; cor=; Ncor=
a	0	2006.0	2466.0	3369.0	6005.0	139.0	9386.0	84.0	234.0	63.0	102.0	569.0	1539.0	2273.0	2082.0	0	0	0	0
c	0	2881.0	2427.0	3117.0	1373.0	9273.0	70.0	8533.0	9005.0	144.0	131.0	1718.0	3247.0	2884.0	3003.0	0	0	0	0
g	0	2476.0	2549.0	1802.0	1492.0	103.0	110.0	672.0	317.0	132.0	9295.0	1581.0	2687.0	1958.0	2281.0	0	0	0	0
t	0	2289.0	2210.0	1364.0	782.0	137.0	86.0	363.0	96.0	9313.0	124.0	5784.0	2179.0	2537.0	2286.0	0	0	0	0
MA0797.1_rc_shift2 (TGIF2_rc) 
; oligos_8nt_mkv5_m7 versus MA0797.1_rc (TGIF2_rc); m=5/50; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.755597; --TGACAsCTGTCA-----
; cor=; Ncor=
a	0	0	420.0	113.0	11801.0	83.0	11801.0	91.0	2690.0	41.0	156.0	155.0	52.0	11801.0	0	0	0	0	0
c	0	0	395.0	136.0	123.0	11801.0	57.0	4341.0	11801.0	270.0	51.0	396.0	11801.0	153.0	0	0	0	0	0
g	0	0	172.0	11801.0	621.0	77.0	410.0	7459.0	262.0	25.0	11801.0	34.0	48.0	421.0	0	0	0	0	0
t	0	0	11801.0	70.0	601.0	150.0	71.0	1501.0	324.0	11801.0	127.0	11801.0	97.0	477.0	0	0	0	0	0
MA1620.1_shift2 (Ptf1a(var.3)) 
; oligos_8nt_mkv5_m7 versus MA1620.1 (Ptf1a(var.3)); m=6/50; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.749427; --rmaCACCTGtky-----
; cor=; Ncor=
a	0	0	2834.0	2613.0	6867.0	184.0	10033.0	116.0	256.0	85.0	68.0	527.0	1678.0	2293.0	0	0	0	0	0
c	0	0	2469.0	3700.0	1188.0	9887.0	60.0	8567.0	9612.0	94.0	109.0	1615.0	2527.0	3004.0	0	0	0	0	0
g	0	0	2664.0	2379.0	1410.0	113.0	84.0	1182.0	294.0	98.0	9972.0	1516.0	3341.0	2183.0	0	0	0	0	0
t	0	0	2324.0	1599.0	826.0	107.0	114.0	426.0	129.0	10014.0	142.0	6633.0	2745.0	2811.0	0	0	0	0	0
MA0796.1_rc_shift2 (TGIF1_rc) 
; oligos_8nt_mkv5_m7 versus MA0796.1_rc (TGIF1_rc); m=7/50; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.744719; --TGACAGCTGTCA-----
; cor=; Ncor=
a	0	0	33.0	17.0	12656.0	9.0	12775.0	12.0	963.0	4.0	7.0	0.0	4.0	13221.0	0	0	0	0	0
c	0	0	32.0	13.0	3.0	13261.0	8.0	2520.0	12673.0	22.0	5.0	20.0	13499.0	1.0	0	0	0	0	0
g	0	0	17.0	13485.0	24.0	13.0	62.0	10562.0	20.0	5.0	13304.0	3.0	8.0	19.0	0	0	0	0	0
t	0	0	9034.0	36.0	45.0	11.0	1.0	452.0	14.0	8861.0	1.0	8828.0	9.0	39.0	0	0	0	0	0
MA1571.1_shift2 (TGIF2LX) 
; oligos_8nt_mkv5_m7 versus MA1571.1 (TGIF2LX); m=8/50; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.741656; --TGACAgcTGTCA-----
; cor=; Ncor=
a	0	0	237.0	52.0	2539.0	32.0	2539.0	37.0	380.0	37.0	64.0	428.0	45.0	2539.0	0	0	0	0	0
c	0	0	355.0	187.0	64.0	2539.0	18.0	575.0	1568.0	318.0	23.0	127.0	2539.0	132.0	0	0	0	0	0
g	0	0	145.0	2539.0	132.0	29.0	316.0	1566.0	554.0	23.0	2539.0	72.0	172.0	361.0	0	0	0	0	0
t	0	0	2539.0	47.0	428.0	59.0	40.0	362.0	38.0	2539.0	22.0	2539.0	66.0	232.0	0	0	0	0	0
MA1572.1_shift2 (TGIF2LY) 
; oligos_8nt_mkv5_m7 versus MA1572.1 (TGIF2LY); m=9/50; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.734883; --TGACAgcTGTCA-----
; cor=; Ncor=
a	0	0	736.0	162.0	5209.0	123.0	5209.0	130.0	1033.0	140.0	175.0	1084.0	135.0	5209.0	0	0	0	0	0
c	0	0	836.0	270.0	163.0	5209.0	37.0	1267.0	2850.0	848.0	61.0	371.0	5209.0	362.0	0	0	0	0	0
g	0	0	415.0	5209.0	349.0	66.0	833.0	2794.0	1188.0	73.0	5209.0	145.0	259.0	807.0	0	0	0	0	0
t	0	0	5209.0	104.0	1197.0	144.0	110.0	1018.0	138.0	5209.0	121.0	5209.0	172.0	679.0	0	0	0	0	0
MA0830.2_shift2 (TCF4) 
; oligos_8nt_mkv5_m7 versus MA0830.2 (TCF4); m=10/50; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.699734; --cggCACCTGccss----
; cor=; Ncor=
a	0	0	6048.0	7034.0	4168.0	243.0	27023.0	216.0	356.0	372.0	251.0	1694.0	5534.0	6413.0	5133.0	0	0	0	0
c	0	0	10052.0	6754.0	5062.0	28686.0	635.0	26765.0	27724.0	1016.0	540.0	18935.0	12872.0	8658.0	9843.0	0	0	0	0
g	0	0	7140.0	8618.0	18498.0	321.0	1295.0	1733.0	1197.0	679.0	28432.0	5281.0	4933.0	7964.0	7662.0	0	0	0	0
t	0	0	6225.0	7059.0	1737.0	215.0	512.0	751.0	188.0	27398.0	242.0	3555.0	6126.0	6430.0	6827.0	0	0	0	0
MA1631.1_shift2 (ASCL1(var.2)) 
; oligos_8nt_mkv5_m7 versus MA1631.1 (ASCL1(var.2)); m=11/50; ncol2=13; w=13; offset=0; strand=D; shift=2; score=0.693334; --cdgCACCTGCysc----
; cor=; Ncor=
a	0	0	6833.0	8952.0	5836.0	184.0	32315.0	163.0	196.0	368.0	251.0	399.0	4490.0	7083.0	5972.0	0	0	0	0
c	0	0	11805.0	7998.0	6654.0	33562.0	563.0	30169.0	33402.0	740.0	445.0	28844.0	17883.0	10555.0	11996.0	0	0	0	0
g	0	0	8371.0	8601.0	18576.0	321.0	860.0	3209.0	607.0	492.0	33411.0	2719.0	2966.0	8939.0	8356.0	0	0	0	0
t	0	0	7347.0	8805.0	3290.0	289.0	618.0	815.0	151.0	32756.0	249.0	2394.0	9017.0	7779.0	8032.0	0	0	0	0
MA1641.1_rc_shift2 (MYF5_rc) 
; oligos_8nt_mkv5_m7 versus MA1641.1_rc (MYF5_rc); m=12/50; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.686653; --gvaCAGCTGtbc-----
; cor=; Ncor=
a	0	0	2697.0	3507.0	7489.0	95.0	10966.0	100.0	222.0	129.0	43.0	578.0	1572.0	2554.0	0	0	0	0	0
c	0	0	2701.0	2985.0	1368.0	10912.0	47.0	230.0	10658.0	69.0	161.0	1774.0	3145.0	3258.0	0	0	0	0	0
g	0	0	3258.0	3146.0	1775.0	161.0	68.0	10657.0	230.0	47.0	10911.0	1368.0	2986.0	2700.0	0	0	0	0	0
t	0	0	2554.0	1572.0	578.0	42.0	129.0	223.0	100.0	10965.0	95.0	7490.0	3507.0	2698.0	0	0	0	0	0
MA1485.1_shift1 (FERD3L) 
; oligos_8nt_mkv5_m7 versus MA1485.1 (FERD3L); m=13/50; ncol2=14; w=13; offset=-1; strand=D; shift=1; score=0.682063; -GyrmCAGCTGTyAC----
; cor=; Ncor=
a	0	2158.0	450.0	14384.0	15390.0	36.0	29605.0	0.0	3649.0	81.0	0.0	1268.0	103.0	29605.0	0.0	0	0	0	0
c	0	68.0	20049.0	2443.0	9363.0	29605.0	126.0	841.0	29605.0	129.0	0.0	3878.0	8664.0	809.0	29605.0	0	0	0	0
g	0	29605.0	348.0	12703.0	3142.0	0.0	118.0	29605.0	471.0	210.0	29605.0	3395.0	5920.0	9815.0	0.0	0	0	0	0
t	0	225.0	9557.0	74.0	1710.0	0.0	144.0	4691.0	0.0	29605.0	0.0	21065.0	14919.0	958.0	48.0	0	0	0	0
MA1619.1_shift2 (Ptf1a(var.2)) 
; oligos_8nt_mkv5_m7 versus MA1619.1 (Ptf1a(var.2)); m=14/50; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.676565; --rmaCAGCTGtky-----
; cor=; Ncor=
a	0	0	1869.0	1978.0	4346.0	49.0	7119.0	34.0	224.0	26.0	27.0	535.0	1221.0	1602.0	0	0	0	0	0
c	0	0	1803.0	2430.0	1070.0	7149.0	41.0	307.0	6697.0	66.0	27.0	1312.0	1632.0	1977.0	0	0	0	0	0
g	0	0	1974.0	1629.0	1308.0	28.0	65.0	6689.0	299.0	40.0	7150.0	1065.0	2426.0	1803.0	0	0	0	0	0
t	0	0	1607.0	1216.0	529.0	27.0	28.0	223.0	33.0	7121.0	49.0	4341.0	1974.0	1871.0	0	0	0	0	0
MA0521.1_rc_shift2 (Tcf12_rc) 
; oligos_8nt_mkv5_m7 versus MA0521.1_rc (Tcf12_rc); m=15/50; ncol2=11; w=11; offset=0; strand=R; shift=2; score= 0.6521; --cwsCAGCTGYy------
; cor=; Ncor=
a	0	0	2191.0	3642.0	1682.0	0.0	12895.0	0.0	0.0	0.0	0.0	0.0	17.0	0	0	0	0	0	0
c	0	0	4836.0	2925.0	3811.0	12895.0	0.0	1889.0	12887.0	0.0	0.0	3951.0	5123.0	0	0	0	0	0	0
g	0	0	3005.0	2416.0	5527.0	0.0	0.0	10822.0	0.0	0.0	12895.0	124.0	1585.0	0	0	0	0	0	0
t	0	0	2863.0	3912.0	1875.0	0.0	0.0	184.0	8.0	12895.0	0.0	8820.0	6170.0	0	0	0	0	0	0
MA0832.1_rc_shift1 (Tcf21_rc) 
; oligos_8nt_mkv5_m7 versus MA0832.1_rc (Tcf21_rc); m=16/50; ncol2=14; w=13; offset=-1; strand=R; shift=1; score= 0.6251; -ryAACAGCTGTTry----
; cor=; Ncor=
a	0	60.0	19.0	171.0	171.0	0.0	171.0	1.0	2.0	0.0	0.0	0.0	3.0	46.0	17.0	0	0	0	0
c	0	32.0	80.0	0.0	20.0	171.0	0.0	1.0	171.0	0.0	0.0	0.0	23.0	22.0	70.0	0	0	0	0
g	0	49.0	23.0	23.0	4.0	0.0	0.0	171.0	0.0	1.0	171.0	10.0	1.0	76.0	29.0	0	0	0	0
t	0	30.0	50.0	5.0	0.0	0.0	0.0	0.0	0.0	171.0	0.0	171.0	171.0	28.0	55.0	0	0	0	0
MA1467.1_shift3 (ATOH1(var.2)) 
; oligos_8nt_mkv5_m7 versus MA1467.1 (ATOH1(var.2)); m=17/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.619529; ---AACAGCTGTY------
; cor=; Ncor=
a	0	0	0	1368.0	1008.0	0.0	1368.0	0.0	204.0	0.0	0.0	93.0	0.0	0	0	0	0	0	0
c	0	0	0	171.0	179.0	1368.0	0.0	0.0	1368.0	0.0	0.0	296.0	943.0	0	0	0	0	0	0
g	0	0	0	466.0	182.0	0.0	0.0	1368.0	0.0	0.0	1368.0	35.0	0.0	0	0	0	0	0	0
t	0	0	0	0.0	0.0	0.0	76.0	181.0	0.0	1368.0	0.0	944.0	426.0	0	0	0	0	0	0
MA0500.2_rc_shift2 (MYOG_rc) 
; oligos_8nt_mkv5_m7 versus MA0500.2_rc (MYOG_rc); m=18/50; ncol2=12; w=12; offset=0; strand=R; shift=2; score=0.610096; --sarCAGCTGyts-----
; cor=; Ncor=
a	0	0	5310.0	8475.0	7192.0	88.0	21777.0	95.0	169.0	163.0	182.0	1678.0	4692.0	5070.0	0	0	0	0	0
c	0	0	6369.0	3718.0	2706.0	21985.0	179.0	131.0	21963.0	236.0	101.0	10790.0	5483.0	5596.0	0	0	0	0	0
g	0	0	5660.0	5497.0	10792.0	102.0	238.0	21964.0	130.0	176.0	21988.0	2730.0	3754.0	6381.0	0	0	0	0	0
t	0	0	5018.0	4667.0	1667.0	182.0	163.0	167.0	95.0	21782.0	86.0	7159.0	8428.0	5310.0	0	0	0	0	0
MA0820.1_shift3 (FIGLA) 
; oligos_8nt_mkv5_m7 versus MA0820.1 (FIGLA); m=19/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.606641; ---wmCACCTGkw------
; cor=; Ncor=
a	0	0	0	886.0	690.0	0.0	1780.0	0.0	9.0	56.0	36.0	154.0	455.0	0	0	0	0	0	0
c	0	0	0	270.0	693.0	1780.0	46.0	1780.0	1780.0	0.0	33.0	225.0	283.0	0	0	0	0	0	0
g	0	0	0	175.0	160.0	0.0	0.0	527.0	311.0	17.0	1780.0	569.0	289.0	0	0	0	0	0	0
t	0	0	0	449.0	237.0	29.0	14.0	0.0	0.0	1780.0	65.0	832.0	753.0	0	0	0	0	0	0
MA0103.3_shift3 (ZEB1) 
; oligos_8nt_mkv5_m7 versus MA0103.3 (ZEB1); m=20/50; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.602253; ---ssCACCTGsss-----
; cor=; Ncor=
a	0	0	0	3211.0	4685.0	114.0	19905.0	32.0	193.0	4.0	441.0	1982.0	4258.0	3490.0	0	0	0	0	0
c	0	0	0	7998.0	5550.0	19195.0	0.0	19878.0	19257.0	501.0	178.0	9561.0	6117.0	6955.0	0	0	0	0	0
g	0	0	0	5228.0	5179.0	158.0	223.0	97.0	649.0	355.0	19381.0	5178.0	6601.0	5828.0	0	0	0	0	0
t	0	0	0	3692.0	4715.0	662.0	1.0	122.0	30.0	19269.0	129.0	3408.0	3153.0	3856.0	0	0	0	0	0
MA1558.1_rc_shift3 (SNAI1_rc) 
; oligos_8nt_mkv5_m7 versus MA1558.1_rc (SNAI1_rc); m=21/50; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.600946; ---yrCACCTGyh------
; cor=; Ncor=
a	0	0	0	6356.0	9044.0	311.0	19982.0	28.0	306.0	568.0	340.0	3518.0	5112.0	0	0	0	0	0	0
c	0	0	0	9894.0	5306.0	19982.0	42.0	19982.0	19982.0	91.0	275.0	12989.0	6410.0	0	0	0	0	0	0
g	0	0	0	4592.0	10938.0	0.0	0.0	5.0	517.0	297.0	19982.0	501.0	3187.0	0	0	0	0	0	0
t	0	0	0	10088.0	1639.0	706.0	38.0	72.0	1766.0	19982.0	446.0	6993.0	5274.0	0	0	0	0	0	0
MA1618.1_rc_shift1 (Ptf1a_rc) 
; oligos_8nt_mkv5_m7 versus MA1618.1_rc (Ptf1a_rc); m=22/50; ncol2=13; w=12; offset=-1; strand=R; shift=1; score=0.598176; -dmaaCATCTGtkh-----
; cor=; Ncor=
a	0	3622.0	3685.0	8294.0	8564.0	210.0	13973.0	148.0	653.0	106.0	172.0	726.0	2735.0	3699.0	0	0	0	0	0
c	0	3376.0	3664.0	2295.0	2854.0	13868.0	118.0	437.0	13072.0	153.0	130.0	2414.0	3568.0	3661.0	0	0	0	0	0
g	0	3689.0	3601.0	2341.0	2058.0	122.0	224.0	1724.0	466.0	118.0	14006.0	2747.0	3662.0	2989.0	0	0	0	0	0
t	0	3754.0	3491.0	1511.0	965.0	241.0	126.0	12132.0	250.0	14064.0	133.0	8554.0	4476.0	4092.0	0	0	0	0	0
MA1559.1_rc_shift3 (SNAI3_rc) 
; oligos_8nt_mkv5_m7 versus MA1559.1_rc (SNAI3_rc); m=23/50; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.596898; ---trCACCTGyt------
; cor=; Ncor=
a	0	0	0	553.0	3161.0	30.0	6248.0	0.0	43.0	3.0	35.0	183.0	1110.0	0	0	0	0	0	0
c	0	0	0	1569.0	1701.0	6248.0	28.0	6248.0	6248.0	34.0	0.0	2331.0	1525.0	0	0	0	0	0	0
g	0	0	0	688.0	6248.0	0.0	12.0	18.0	29.0	0.0	6248.0	0.0	661.0	0	0	0	0	0	0
t	0	0	0	4680.0	432.0	94.0	0.0	0.0	118.0	6248.0	23.0	3917.0	2952.0	0	0	0	0	0	0
MA0667.1_shift3 (MYF6) 
; oligos_8nt_mkv5_m7 versus MA0667.1 (MYF6); m=24/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.573261; ---AACArCTGTY------
; cor=; Ncor=
a	0	0	0	444.0	444.0	0.0	444.0	159.0	12.0	11.0	0.0	2.0	0.0	0	0	0	0	0	0
c	0	0	0	12.0	18.0	444.0	3.0	30.0	353.0	0.0	2.0	22.0	159.0	0	0	0	0	0	0
g	0	0	0	70.0	24.0	0.0	7.0	256.0	35.0	0.0	444.0	0.0	7.0	0	0	0	0	0	0
t	0	0	0	7.0	1.0	0.0	0.0	12.0	56.0	444.0	0.0	444.0	444.0	0	0	0	0	0	0
MA1472.1_shift3 (BHLHA15(var.2)) 
; oligos_8nt_mkv5_m7 versus MA1472.1 (BHLHA15(var.2)); m=25/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.57011; ---avCAGCTGyy------
; cor=; Ncor=
a	0	0	0	697.0	897.0	47.0	1504.0	11.0	445.0	54.0	0.0	54.0	202.0	0	0	0	0	0	0
c	0	0	0	281.0	607.0	1504.0	33.0	30.0	1504.0	4.0	0.0	610.0	410.0	0	0	0	0	0	0
g	0	0	0	357.0	591.0	6.0	33.0	1504.0	72.0	0.0	1504.0	489.0	316.0	0	0	0	0	0	0
t	0	0	0	170.0	81.0	33.0	137.0	467.0	11.0	1504.0	0.0	1015.0	577.0	0	0	0	0	0	0
MA0665.1_shift3 (MSC) 
; oligos_8nt_mkv5_m7 versus MA0665.1 (MSC); m=26/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.559248; ---AACAGCTGTT------
; cor=; Ncor=
a	0	0	0	69.0	69.0	0.0	69.0	0.0	0.0	0.0	0.0	3.0	0.0	0	0	0	0	0	0
c	0	0	0	0.0	12.0	69.0	0.0	12.0	69.0	0.0	0.0	10.0	9.0	0	0	0	0	0	0
g	0	0	0	18.0	3.0	3.0	0.0	69.0	3.0	0.0	69.0	4.0	4.0	0	0	0	0	0	0
t	0	0	0	7.0	0.0	1.0	0.0	0.0	0.0	69.0	4.0	69.0	69.0	0	0	0	0	0	0
MA1100.2_rc_shift3 (ASCL1_rc) 
; oligos_8nt_mkv5_m7 versus MA1100.2_rc (ASCL1_rc); m=27/50; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.552922; ---rgCAGCTGyy------
; cor=; Ncor=
a	0	0	0	1194.0	1349.0	29.0	4413.0	20.0	625.0	218.0	14.0	354.0	726.0	0	0	0	0	0	0
c	0	0	0	889.0	814.0	4413.0	121.0	1320.0	4413.0	60.0	0.0	3079.0	1495.0	0	0	0	0	0	0
g	0	0	0	1487.0	3065.0	0.0	24.0	4413.0	1288.0	157.0	4413.0	521.0	926.0	0	0	0	0	0	0
t	0	0	0	843.0	177.0	52.0	118.0	729.0	107.0	4413.0	0.0	1334.0	1267.0	0	0	0	0	0	0
MA1648.1_shift3 (TCF12(var.2)) 
; oligos_8nt_mkv5_m7 versus MA1648.1 (TCF12(var.2)); m=28/50; ncol2=11; w=11; offset=1; strand=D; shift=3; score=0.550601; ---ssCACCTGCys-----
; cor=; Ncor=
a	0	0	0	13014.0	14835.0	955.0	52529.0	744.0	1913.0	1380.0	2819.0	1089.0	13867.0	11414.0	0	0	0	0	0
c	0	0	0	19393.0	17594.0	57848.0	2007.0	55598.0	55765.0	3886.0	2088.0	55061.0	17603.0	18154.0	0	0	0	0	0
g	0	0	0	16996.0	18560.0	1186.0	5607.0	3780.0	3536.0	2625.0	55922.0	2314.0	14293.0	20060.0	0	0	0	0	0
t	0	0	0	12473.0	10887.0	1887.0	1733.0	1754.0	662.0	53985.0	1047.0	3412.0	16113.0	12248.0	0	0	0	0	0
MA0774.1_rc_shift7 (MEIS2_rc) 
; oligos_8nt_mkv5_m7 versus MA0774.1_rc (MEIS2_rc); m=29/50; ncol2=8; w=8; offset=5; strand=R; shift=7; score=0.538524; -------sCTGTCAa----
; cor=; Ncor=
a	0	0	0	0	0	0	0	88.0	67.0	0.0	5.0	62.0	0.0	1351.0	1351.0	0	0	0	0
c	0	0	0	0	0	0	0	650.0	1351.0	4.0	0.0	25.0	1351.0	40.0	314.0	0	0	0	0
g	0	0	0	0	0	0	0	701.0	98.0	7.0	1351.0	3.0	0.0	3.0	264.0	0	0	0	0
t	0	0	0	0	0	0	0	157.0	83.0	1351.0	9.0	1351.0	0.0	31.0	408.0	0	0	0	0
MA1635.1_rc_shift3 (BHLHE22(var.2)_rc) 
; oligos_8nt_mkv5_m7 versus MA1635.1_rc (BHLHE22(var.2)_rc); m=30/50; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.531427; ---csCAGCTGsg------
; cor=; Ncor=
a	0	0	0	3886.0	4449.0	0.0	18267.0	1.0	14.0	0.0	14.0	1526.0	4402.0	0	0	0	0	0	0
c	0	0	0	5625.0	5112.0	18327.0	37.0	53.0	18288.0	52.0	11.0	7267.0	4447.0	0	0	0	0	0	0
g	0	0	0	4447.0	7269.0	15.0	52.0	18288.0	53.0	37.0	18331.0	5110.0	5621.0	0	0	0	0	0	0
t	0	0	0	4398.0	1526.0	14.0	0.0	14.0	1.0	18267.0	0.0	4453.0	3886.0	0	0	0	0	0	0
MA0775.1_rc_shift7 (MEIS3_rc) 
; oligos_8nt_mkv5_m7 versus MA0775.1_rc (MEIS3_rc); m=31/50; ncol2=8; w=8; offset=5; strand=R; shift=7; score=0.528581; -------scTGTCAw----
; cor=; Ncor=
a	0	0	0	0	0	0	0	975.0	2094.0	145.0	160.0	53.0	0.0	7165.0	3451.0	0	0	0	0
c	0	0	0	0	0	0	0	2888.0	7165.0	468.0	8.0	455.0	7165.0	260.0	1788.0	0	0	0	0
g	0	0	0	0	0	0	0	2342.0	1889.0	8.0	7165.0	20.0	6.0	383.0	60.0	0	0	0	0
t	0	0	0	0	0	0	0	960.0	1690.0	7165.0	53.0	7165.0	0.0	465.0	1866.0	0	0	0	0
MA0816.1_shift3 (Ascl2) 
; oligos_8nt_mkv5_m7 versus MA0816.1 (Ascl2); m=32/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.526779; ---arCAGCTGyy------
; cor=; Ncor=
a	0	0	0	237.0	128.0	3.0	300.0	7.0	3.0	4.0	0.0	6.0	34.0	0	0	0	0	0	0
c	0	0	0	36.0	41.0	300.0	0.0	23.0	300.0	0.0	1.0	206.0	101.0	0	0	0	0	0	0
g	0	0	0	63.0	172.0	0.0	0.0	300.0	2.0	0.0	300.0	15.0	28.0	0	0	0	0	0	0
t	0	0	0	16.0	1.0	1.0	15.0	18.0	1.0	300.0	2.0	94.0	199.0	0	0	0	0	0	0
MA0691.1_shift3 (TFAP4) 
; oligos_8nt_mkv5_m7 versus MA0691.1 (TFAP4); m=33/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.516907; ---AwCAGCTGwT------
; cor=; Ncor=
a	0	0	0	3423.0	2159.0	0.0	3423.0	2.0	21.0	1.0	0.0	1810.0	299.0	0	0	0	0	0	0
c	0	0	0	500.0	546.0	3423.0	2.0	85.0	3423.0	1.0	1.0	114.0	682.0	0	0	0	0	0	0
g	0	0	0	337.0	62.0	0.0	0.0	3423.0	49.0	0.0	3423.0	333.0	433.0	0	0	0	0	0	0
t	0	0	0	228.0	1264.0	0.0	0.0	14.0	6.0	3423.0	0.0	1613.0	3423.0	0	0	0	0	0	0
MA0819.1_shift3 (CLOCK) 
; oligos_8nt_mkv5_m7 versus MA0819.1 (CLOCK); m=34/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.516049; ---aACACGTGty------
; cor=; Ncor=
a	0	0	0	226.0	429.0	11.0	429.0	16.0	40.0	3.0	0.0	1.0	89.0	0	0	0	0	0	0
c	0	0	0	35.0	85.0	429.0	5.0	429.0	0.0	5.0	3.0	152.0	128.0	0	0	0	0	0	0
g	0	0	0	93.0	89.0	2.0	15.0	0.0	429.0	5.0	429.0	110.0	39.0	0	0	0	0	0	0
t	0	0	0	75.0	13.0	2.0	0.0	28.0	0.0	429.0	9.0	429.0	174.0	0	0	0	0	0	0
MA0649.1_rc_shift3 (HEY2_rc) 
; oligos_8nt_mkv5_m7 versus MA0649.1_rc (HEY2_rc); m=35/50; ncol2=10; w=10; offset=1; strand=R; shift=3; score=0.513387; ---grCACGTGyC------
; cor=; Ncor=
a	0	0	0	264.0	753.0	30.0	1800.0	0.0	0.0	0.0	58.0	224.0	101.0	0	0	0	0	0	0
c	0	0	0	382.0	128.0	1800.0	0.0	1800.0	0.0	128.0	83.0	620.0	1800.0	0	0	0	0	0	0
g	0	0	0	869.0	1047.0	34.0	120.0	72.0	1800.0	0.0	1800.0	305.0	99.0	0	0	0	0	0	0
t	0	0	0	285.0	50.0	0.0	36.0	27.0	7.0	1800.0	84.0	651.0	107.0	0	0	0	0	0	0
MA0807.1_rc_shift2 (TBX5_rc) 
; oligos_8nt_mkv5_m7 versus MA0807.1_rc (TBX5_rc); m=36/50; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.511654; --TmACACCT---------
; cor=; Ncor=
a	0	0	283.0	915.0	1804.0	0.0	1804.0	28.0	133.0	207.0	0	0	0	0	0	0	0	0	0
c	0	0	343.0	1804.0	201.0	1804.0	166.0	1804.0	1804.0	409.0	0	0	0	0	0	0	0	0	0
g	0	0	76.0	616.0	225.0	0.0	131.0	0.0	190.0	89.0	0	0	0	0	0	0	0	0	0
t	0	0	1804.0	126.0	162.0	27.0	45.0	0.0	235.0	1804.0	0	0	0	0	0	0	0	0	0
MA0100.3_shift3 (MYB) 
; oligos_8nt_mkv5_m7 versus MA0100.3 (MYB); m=37/50; ncol2=10; w=10; offset=1; strand=D; shift=3; score=0.508186; ---mbCAACTGhm------
; cor=; Ncor=
a	0	0	0	425.0	292.0	0.0	1478.0	1519.0	0.0	1.0	8.0	401.0	422.0	0	0	0	0	0	0
c	0	0	0	422.0	428.0	1513.0	3.0	2.0	1527.0	60.0	3.0	482.0	528.0	0	0	0	0	0	0
g	0	0	0	300.0	397.0	5.0	39.0	0.0	0.0	68.0	1516.0	147.0	225.0	0	0	0	0	0	0
t	0	0	0	380.0	410.0	9.0	7.0	6.0	0.0	1398.0	0.0	497.0	352.0	0	0	0	0	0	0
MA0806.1_rc_shift2 (TBX4_rc) 
; oligos_8nt_mkv5_m7 versus MA0806.1_rc (TBX4_rc); m=38/50; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.506038; --TcACACCT---------
; cor=; Ncor=
a	0	0	965.0	8384.0	18646.0	0.0	18646.0	33.0	1162.0	1283.0	0	0	0	0	0	0	0	0	0
c	0	0	1733.0	18646.0	304.0	18646.0	191.0	18646.0	18646.0	2353.0	0	0	0	0	0	0	0	0	0
g	0	0	588.0	5396.0	2859.0	0.0	1644.0	189.0	2328.0	437.0	0	0	0	0	0	0	0	0	0
t	0	0	18646.0	1355.0	1551.0	0.0	0.0	38.0	3082.0	18646.0	0	0	0	0	0	0	0	0	0
MA0803.1_rc_shift2 (TBX15_rc) 
; oligos_8nt_mkv5_m7 versus MA0803.1_rc (TBX15_rc); m=39/50; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.496939; --TCACACCT---------
; cor=; Ncor=
a	0	0	96.0	937.0	10502.0	0.0	10502.0	0.0	103.0	112.0	0	0	0	0	0	0	0	0	0
c	0	0	306.0	10502.0	324.0	10502.0	245.0	10502.0	10502.0	664.0	0	0	0	0	0	0	0	0	0
g	0	0	71.0	454.0	435.0	8.0	175.0	7.0	101.0	74.0	0	0	0	0	0	0	0	0	0
t	0	0	10502.0	44.0	140.0	0.0	61.0	19.0	458.0	10502.0	0	0	0	0	0	0	0	0	0
MA0805.1_rc_shift2 (TBX1_rc) 
; oligos_8nt_mkv5_m7 versus MA0805.1_rc (TBX1_rc); m=40/50; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.485399; --TCACACCT---------
; cor=; Ncor=
a	0	0	0.0	1039.0	11931.0	0.0	11931.0	0.0	669.0	564.0	0	0	0	0	0	0	0	0	0
c	0	0	18.0	11931.0	109.0	11931.0	141.0	11931.0	11931.0	1007.0	0	0	0	0	0	0	0	0	0
g	0	0	33.0	720.0	613.0	5.0	214.0	0.0	711.0	113.0	0	0	0	0	0	0	0	0	0
t	0	0	11931.0	141.0	142.0	0.0	28.0	0.0	1560.0	11931.0	0	0	0	0	0	0	0	0	0
MA1114.1_rc_shift4 (PBX3_rc) 
; oligos_8nt_mkv5_m7 versus MA1114.1_rc (PBX3_rc); m=41/50; ncol2=17; w=12; offset=2; strand=R; shift=4; score=0.477055; ----sygcCTGTCACTCAv
; cor=; Ncor=
a	0	0	0	0	1508.0	1465.0	1525.0	683.0	549.0	376.0	138.0	145.0	83.0	6290.0	969.0	256.0	160.0	5697.0	1924.0
c	0	0	0	0	2217.0	2068.0	1591.0	4077.0	5691.0	425.0	209.0	604.0	6550.0	285.0	4929.0	214.0	6406.0	503.0	1928.0
g	0	0	0	0	1801.0	1619.0	2654.0	1377.0	412.0	129.0	6524.0	108.0	242.0	199.0	788.0	125.0	227.0	225.0	1849.0
t	0	0	0	0	1495.0	1869.0	1251.0	884.0	369.0	6091.0	150.0	6164.0	146.0	247.0	335.0	6426.0	228.0	596.0	1320.0
MA0801.1_rc_shift2 (MGA_rc) 
; oligos_8nt_mkv5_m7 versus MA0801.1_rc (MGA_rc); m=42/50; ncol2=8; w=8; offset=0; strand=R; shift=2; score=0.474438; --TCACACCT---------
; cor=; Ncor=
a	0	0	274.0	6465.0	30489.0	11.0	30489.0	104.0	1929.0	4160.0	0	0	0	0	0	0	0	0	0
c	0	0	920.0	30489.0	381.0	30489.0	96.0	30489.0	30489.0	8873.0	0	0	0	0	0	0	0	0	0
g	0	0	110.0	1753.0	3089.0	1.0	3534.0	509.0	3737.0	1151.0	0	0	0	0	0	0	0	0	0
t	0	0	30489.0	689.0	1042.0	14.0	12.0	16.0	4310.0	30489.0	0	0	0	0	0	0	0	0	0
MA0782.2_rc_shift5 (PKNOX1_rc) 
; oligos_8nt_mkv5_m7 versus MA0782.2_rc (PKNOX1_rc); m=43/50; ncol2=15; w=11; offset=3; strand=R; shift=5; score=0.464251; -----yagCTGTCAcTCAw
; cor=; Ncor=
a	0	0	0	0	0	9877.0	12900.0	6042.0	5092.0	2629.0	886.0	720.0	691.0	36918.0	7333.0	1196.0	1043.0	29794.0	10355.0
c	0	0	0	0	0	10296.0	9060.0	9128.0	27367.0	2408.0	580.0	2459.0	37713.0	1027.0	26182.0	1330.0	36106.0	3322.0	9535.0
g	0	0	0	0	0	9268.0	9386.0	16341.0	4759.0	944.0	37846.0	410.0	1004.0	878.0	4123.0	678.0	1160.0	1625.0	9828.0
t	0	0	0	0	0	10522.0	8617.0	8452.0	2745.0	33982.0	651.0	36374.0	555.0	1140.0	2325.0	36759.0	1654.0	5222.0	10245.0
MA0498.2_rc_shift8 (MEIS1_rc) 
; oligos_8nt_mkv5_m7 versus MA0498.2_rc (MEIS1_rc); m=44/50; ncol2=7; w=7; offset=6; strand=R; shift=8; score=0.457995; --------cTGTCAw----
; cor=; Ncor=
a	0	0	0	0	0	0	0	0	15106.0	3861.0	1155.0	0.0	0.0	77159.0	24921.0	0	0	0	0
c	0	0	0	0	0	0	0	0	29965.0	9263.0	0.0	672.0	77159.0	3174.0	9714.0	0	0	0	0
g	0	0	0	0	0	0	0	0	14864.0	0.0	77159.0	2903.0	1249.0	5575.0	18797.0	0	0	0	0
t	0	0	0	0	0	0	0	0	17224.0	77159.0	0.0	77159.0	0.0	8690.0	23727.0	0	0	0	0
MA1567.1_rc_shift1 (TBX6_rc) 
; oligos_8nt_mkv5_m7 versus MA1567.1_rc (TBX6_rc); m=45/50; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.457277; -tTmACACcty--------
; cor=; Ncor=
a	0	2330.0	713.0	5964.0	11087.0	12.0	11087.0	0.0	1058.0	2157.0	2456.0	0	0	0	0	0	0	0	0
c	0	2141.0	2251.0	11087.0	320.0	11087.0	0.0	11087.0	11087.0	3347.0	4003.0	0	0	0	0	0	0	0	0
g	0	2066.0	652.0	4876.0	3053.0	0.0	1002.0	63.0	2913.0	1173.0	1630.0	0	0	0	0	0	0	0	0
t	0	4550.0	11087.0	1430.0	552.0	14.0	44.0	58.0	1882.0	11087.0	2998.0	0	0	0	0	0	0	0	0
MA1566.1_rc_shift1 (TBX3_rc) 
; oligos_8nt_mkv5_m7 versus MA1566.1_rc (TBX3_rc); m=46/50; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.449394; -ttsACACcty--------
; cor=; Ncor=
a	0	578.0	484.0	1112.0	2544.0	0.0	2544.0	0.0	302.0	760.0	497.0	0	0	0	0	0	0	0	0
c	0	620.0	947.0	2544.0	155.0	2544.0	0.0	2544.0	2544.0	1207.0	1003.0	0	0	0	0	0	0	0	0
g	0	586.0	410.0	1471.0	634.0	0.0	735.0	45.0	862.0	481.0	399.0	0	0	0	0	0	0	0	0
t	0	760.0	2544.0	170.0	115.0	0.0	16.0	6.0	427.0	2544.0	644.0	0	0	0	0	0	0	0	0
MA0690.1_rc_shift1 (TBX21_rc) 
; oligos_8nt_mkv5_m7 versus MA0690.1_rc (TBX21_rc); m=47/50; ncol2=10; w=9; offset=-1; strand=R; shift=1; score=0.431314; -TTCACACCTt--------
; cor=; Ncor=
a	0	1287.0	0.0	364.0	4395.0	2.0	4395.0	33.0	398.0	146.0	872.0	0	0	0	0	0	0	0	0
c	0	317.0	38.0	4395.0	34.0	4395.0	16.0	4395.0	4395.0	359.0	937.0	0	0	0	0	0	0	0	0
g	0	441.0	0.0	126.0	331.0	0.0	180.0	17.0	239.0	30.0	263.0	0	0	0	0	0	0	0	0
t	0	4395.0	4395.0	80.0	185.0	1.0	6.0	2.0	612.0	4395.0	2322.0	0	0	0	0	0	0	0	0
MA0802.1_rc_shift0 (TBR1_rc) 
; oligos_8nt_mkv5_m7 versus MA0802.1_rc (TBR1_rc); m=48/50; ncol2=10; w=8; offset=-2; strand=R; shift=0; score=0.424252; tTTCACACCT---------
; cor=; Ncor=
a	5846.0	4576.0	205.0	7001.0	34509.0	4.0	34509.0	213.0	4480.0	1433.0	0	0	0	0	0	0	0	0	0
c	4537.0	1488.0	584.0	34509.0	157.0	34509.0	88.0	34509.0	34509.0	3329.0	0	0	0	0	0	0	0	0	0
g	5619.0	2575.0	90.0	2551.0	4742.0	6.0	1759.0	254.0	3255.0	359.0	0	0	0	0	0	0	0	0	0
t	18507.0	25869.0	34509.0	1175.0	2386.0	0.0	39.0	70.0	6880.0	34509.0	0	0	0	0	0	0	0	0	0
MA0688.1_rc_shift0 (TBX2_rc) 
; oligos_8nt_mkv5_m7 versus MA0688.1_rc (TBX2_rc); m=49/50; ncol2=11; w=9; offset=-2; strand=R; shift=0; score=0.418119; ttTcACACCTw--------
; cor=; Ncor=
a	667.0	656.0	120.0	1409.0	3181.0	12.0	3181.0	14.0	353.0	442.0	804.0	0	0	0	0	0	0	0	0
c	590.0	527.0	125.0	3181.0	27.0	3181.0	21.0	3181.0	3181.0	716.0	717.0	0	0	0	0	0	0	0	0
g	446.0	491.0	26.0	1289.0	392.0	0.0	329.0	36.0	519.0	59.0	402.0	0	0	0	0	0	0	0	0
t	1477.0	2525.0	3181.0	310.0	307.0	26.0	0.0	9.0	602.0	3181.0	1258.0	0	0	0	0	0	0	0	0
MA0689.1_rc_shift0 (TBX20_rc) 
; oligos_8nt_mkv5_m7 versus MA0689.1_rc (TBX20_rc); m=50/50; ncol2=11; w=9; offset=-2; strand=R; shift=0; score=0.405334; yTTCACACCTw--------
; cor=; Ncor=
a	59.0	170.0	10.0	82.0	572.0	4.0	572.0	40.0	26.0	24.0	250.0	0	0	0	0	0	0	0	0
c	300.0	53.0	6.0	572.0	11.0	572.0	10.0	572.0	572.0	54.0	121.0	0	0	0	0	0	0	0	0
g	60.0	16.0	1.0	10.0	1.0	1.0	0.0	0.0	34.0	23.0	4.0	0	0	0	0	0	0	0	0
t	154.0	572.0	572.0	48.0	8.0	0.0	0.0	0.0	50.0	572.0	197.0	0	0	0	0	0	0	0	0