One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep2_motifs50/results/discovered_motifs/positions_7nt_m6/peak-motifs_positions_7nt_m6.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep2_motifs50/results/discovered_motifs/positions_7nt_m6/peak-motifs_positions_7nt_m6_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: positions_7nt_m6_shift2 ; 30 matrices ; sort_field=Ncor

Matrix nameAligned logoscor Ncor Aligned matrices
positions_7nt_m6_shift2 (positions_7nt_m6positions_7nt_m6)     
; positions_7nt_m6 (positions_7nt_m6positions_7nt_m6); m=0 (reference); ncol1=16; shift=2; ncol=18; --gsrACAGCTGCtgcbs
; Alignment reference
a	0	0	405	347	793	1304	3	1778	11	9	46	4	29	304	241	303	316	368
c	0	0	441	536	372	126	1773	0	20	1745	8	2	1668	202	347	698	502	500
g	0	0	666	567	501	292	2	4	1753	25	0	1780	30	127	995	399	509	544
t	0	0	274	336	120	64	8	4	2	7	1732	0	59	1153	203	386	459	374
MA0832.1_shift2 (Tcf21) 
; positions_7nt_m6 versus MA0832.1 (Tcf21); m=1/29; ncol2=14; w=14; offset=0; strand=D; shift=2; score=0.732079; --ryAACAGCTGTTry--
; cor=; Ncor=
a	0	0	55.0	28.0	171.0	171.0	0.0	171.0	0.0	0.0	0.0	0.0	0.0	5.0	50.0	30.0	0	0
c	0	0	29.0	76.0	1.0	10.0	171.0	1.0	0.0	171.0	0.0	0.0	4.0	23.0	23.0	49.0	0	0
g	0	0	70.0	22.0	23.0	0.0	0.0	0.0	171.0	1.0	0.0	171.0	20.0	0.0	80.0	32.0	0	0
t	0	0	17.0	46.0	3.0	0.0	0.0	0.0	2.0	1.0	171.0	0.0	171.0	171.0	19.0	60.0	0	0
MA0500.2_rc_shift3 (MYOG_rc) 
; positions_7nt_m6 versus MA0500.2_rc (MYOG_rc); m=2/29; ncol2=12; w=12; offset=1; strand=R; shift=3; score=0.695093; ---sarCAGCTGyts---
; cor=; Ncor=
a	0	0	0	5310.0	8475.0	7192.0	88.0	21777.0	95.0	169.0	163.0	182.0	1678.0	4692.0	5070.0	0	0	0
c	0	0	0	6369.0	3718.0	2706.0	21985.0	179.0	131.0	21963.0	236.0	101.0	10790.0	5483.0	5596.0	0	0	0
g	0	0	0	5660.0	5497.0	10792.0	102.0	238.0	21964.0	130.0	176.0	21988.0	2730.0	3754.0	6381.0	0	0	0
t	0	0	0	5018.0	4667.0	1667.0	182.0	163.0	167.0	95.0	21782.0	86.0	7159.0	8428.0	5310.0	0	0	0
MA1485.1_rc_shift2 (FERD3L_rc) 
; positions_7nt_m6 versus MA1485.1_rc (FERD3L_rc); m=3/29; ncol2=14; w=14; offset=0; strand=R; shift=2; score=0.690978; --GTrACAGCTGkyrC--
; cor=; Ncor=
a	0	0	48.0	958.0	14919.0	21065.0	0.0	29605.0	0.0	4691.0	144.0	0.0	1710.0	74.0	9557.0	225.0	0	0
c	0	0	0.0	9815.0	5920.0	3395.0	29605.0	210.0	471.0	29605.0	118.0	0.0	3142.0	12703.0	348.0	29605.0	0	0
g	0	0	29605.0	809.0	8664.0	3878.0	0.0	129.0	29605.0	841.0	126.0	29605.0	9363.0	2443.0	20049.0	68.0	0	0
t	0	0	0.0	29605.0	103.0	1268.0	0.0	81.0	3649.0	0.0	29605.0	36.0	15390.0	14384.0	450.0	2158.0	0	0
MA0499.2_rc_shift2 (MYOD1_rc) 
; positions_7nt_m6 versus MA0499.2_rc (MYOD1_rc); m=4/29; ncol2=13; w=13; offset=0; strand=R; shift=2; score=0.68617; --rkrACAGGTGcwg---
; cor=; Ncor=
a	0	0	9358.0	8151.0	9000.0	29644.0	238.0	33130.0	330.0	1226.0	587.0	269.0	2245.0	9291.0	7728.0	0	0	0
c	0	0	7495.0	6202.0	4440.0	1699.0	33468.0	366.0	932.0	7336.0	849.0	354.0	21884.0	8444.0	8118.0	0	0	0
g	0	0	11760.0	10485.0	19052.0	2555.0	386.0	563.0	32504.0	25275.0	583.0	33328.0	5622.0	7103.0	11279.0	0	0	0
t	0	0	5687.0	9462.0	1808.0	402.0	208.0	241.0	534.0	463.0	32281.0	349.0	4549.0	9462.0	7175.0	0	0	0
MA1529.1_rc_shift0 (NHLH2_rc) 
; positions_7nt_m6 versus MA1529.1_rc (NHLH2_rc); m=5/29; ncol2=18; w=16; offset=-2; strand=R; shift=0; score=0.656532; gkGrCGCAGCTGCKrCcc
; cor=; Ncor=
a	4228.0	3330.0	2533.0	13503.0	740.0	1230.0	0.0	21358.0	0.0	1054.0	1.0	5.0	2634.0	151.0	5394.0	2763.0	5198.0	4143.0
c	2264.0	1579.0	1183.0	1520.0	20977.0	275.0	21363.0	3.0	2266.0	20096.0	26.0	2.0	18930.0	671.0	4908.0	18450.0	13903.0	9732.0
g	11271.0	13462.0	18351.0	7207.0	204.0	20611.0	2.0	14.0	20268.0	2459.0	0.0	21359.0	2324.0	15451.0	6141.0	1065.0	2219.0	2655.0
t	3601.0	6392.0	3766.0	1184.0	210.0	693.0	0.0	0.0	525.0	6.0	21364.0	2.0	2378.0	5603.0	4921.0	3741.0	4312.0	4834.0
MA1619.1_shift3 (Ptf1a(var.2)) 
; positions_7nt_m6 versus MA1619.1 (Ptf1a(var.2)); m=6/29; ncol2=12; w=12; offset=1; strand=D; shift=3; score=0.65434; ---rmaCAGCTGtky---
; cor=; Ncor=
a	0	0	0	1869.0	1978.0	4346.0	49.0	7119.0	34.0	224.0	26.0	27.0	535.0	1221.0	1602.0	0	0	0
c	0	0	0	1803.0	2430.0	1070.0	7149.0	41.0	307.0	6697.0	66.0	27.0	1312.0	1632.0	1977.0	0	0	0
g	0	0	0	1974.0	1629.0	1308.0	28.0	65.0	6689.0	299.0	40.0	7150.0	1065.0	2426.0	1803.0	0	0	0
t	0	0	0	1607.0	1216.0	529.0	27.0	28.0	223.0	33.0	7121.0	49.0	4341.0	1974.0	1871.0	0	0	0
MA1641.1_shift3 (MYF5) 
; positions_7nt_m6 versus MA1641.1 (MYF5); m=7/29; ncol2=12; w=12; offset=1; strand=D; shift=3; score=0.653773; ---gvaCAGCTGtbc---
; cor=; Ncor=
a	0	0	0	2698.0	3507.0	7490.0	95.0	10965.0	100.0	223.0	129.0	42.0	578.0	1572.0	2554.0	0	0	0
c	0	0	0	2700.0	2986.0	1368.0	10911.0	47.0	230.0	10657.0	68.0	161.0	1775.0	3146.0	3258.0	0	0	0
g	0	0	0	3258.0	3145.0	1774.0	161.0	69.0	10658.0	230.0	47.0	10912.0	1368.0	2985.0	2701.0	0	0	0
t	0	0	0	2554.0	1572.0	578.0	43.0	129.0	222.0	100.0	10966.0	95.0	7489.0	3507.0	2697.0	0	0	0
MA0521.1_shift4 (Tcf12) 
; positions_7nt_m6 versus MA0521.1 (Tcf12); m=8/29; ncol2=11; w=11; offset=2; strand=D; shift=4; score=0.645464; ----rRCAGCTGswg---
; cor=; Ncor=
a	0	0	0	0	6170.0	8820.0	0.0	12895.0	8.0	184.0	0.0	0.0	1875.0	3912.0	2863.0	0	0	0
c	0	0	0	0	1585.0	124.0	12895.0	0.0	0.0	10822.0	0.0	0.0	5527.0	2416.0	3005.0	0	0	0
g	0	0	0	0	5123.0	3951.0	0.0	0.0	12887.0	1889.0	0.0	12895.0	3811.0	2925.0	4836.0	0	0	0
t	0	0	0	0	17.0	0.0	0.0	0.0	0.0	0.0	12895.0	0.0	1682.0	3642.0	2191.0	0	0	0
MA1621.1_rc_shift2 (Rbpjl_rc) 
; positions_7nt_m6 versus MA1621.1_rc (Rbpjl_rc); m=9/29; ncol2=14; w=14; offset=0; strand=R; shift=2; score=0.621235; --grsaCAGGTGtkbs--
; cor=; Ncor=
a	0	0	2286.0	2537.0	2179.0	5784.0	124.0	9313.0	96.0	363.0	86.0	137.0	782.0	1364.0	2210.0	2289.0	0	0
c	0	0	2281.0	1958.0	2687.0	1581.0	9295.0	132.0	317.0	672.0	110.0	103.0	1492.0	1802.0	2549.0	2476.0	0	0
g	0	0	3003.0	2884.0	3247.0	1718.0	131.0	144.0	9005.0	8533.0	70.0	9273.0	1373.0	3117.0	2427.0	2881.0	0	0
t	0	0	2082.0	2273.0	1539.0	569.0	102.0	63.0	234.0	84.0	9386.0	139.0	6005.0	3369.0	2466.0	2006.0	0	0
MA1631.1_shift3 (ASCL1(var.2)) 
; positions_7nt_m6 versus MA1631.1 (ASCL1(var.2)); m=10/29; ncol2=13; w=13; offset=1; strand=D; shift=3; score= 0.6162; ---cdgCACCTGCysc--
; cor=; Ncor=
a	0	0	0	6833.0	8952.0	5836.0	184.0	32315.0	163.0	196.0	368.0	251.0	399.0	4490.0	7083.0	5972.0	0	0
c	0	0	0	11805.0	7998.0	6654.0	33562.0	563.0	30169.0	33402.0	740.0	445.0	28844.0	17883.0	10555.0	11996.0	0	0
g	0	0	0	8371.0	8601.0	18576.0	321.0	860.0	3209.0	607.0	492.0	33411.0	2719.0	2966.0	8939.0	8356.0	0	0
t	0	0	0	7347.0	8805.0	3290.0	289.0	618.0	815.0	151.0	32756.0	249.0	2394.0	9017.0	7779.0	8032.0	0	0
MA0745.2_rc_shift2 (SNAI2_rc) 
; positions_7nt_m6 versus MA0745.2_rc (SNAI2_rc); m=11/29; ncol2=13; w=13; offset=0; strand=R; shift=2; score=0.606966; --rykACAGGTGcrt---
; cor=; Ncor=
a	0	0	17906.0	8917.0	8747.0	37272.0	126.0	45229.0	344.0	234.0	227.0	622.0	2359.0	16344.0	9958.0	0	0	0
c	0	0	8219.0	12297.0	6281.0	1263.0	45257.0	196.0	487.0	326.0	424.0	323.0	26742.0	9490.0	11169.0	0	0	0
g	0	0	13476.0	11016.0	18771.0	6467.0	254.0	313.0	44739.0	45144.0	202.0	44463.0	6393.0	12314.0	10031.0	0	0	0
t	0	0	6215.0	13586.0	12017.0	814.0	179.0	78.0	246.0	112.0	44963.0	408.0	10322.0	7668.0	14658.0	0	0	0
MA1618.1_shift3 (Ptf1a) 
; positions_7nt_m6 versus MA1618.1 (Ptf1a); m=12/29; ncol2=13; w=13; offset=1; strand=D; shift=3; score=0.600496; ---dmaCAGATGttkh--
; cor=; Ncor=
a	0	0	0	4092.0	4476.0	8554.0	133.0	14064.0	250.0	12132.0	126.0	241.0	965.0	1511.0	3491.0	3754.0	0	0
c	0	0	0	2989.0	3662.0	2747.0	14006.0	118.0	466.0	1724.0	224.0	122.0	2058.0	2341.0	3601.0	3689.0	0	0
g	0	0	0	3661.0	3568.0	2414.0	130.0	153.0	13072.0	437.0	118.0	13868.0	2854.0	2295.0	3664.0	3376.0	0	0
t	0	0	0	3699.0	2735.0	726.0	172.0	106.0	653.0	148.0	13973.0	210.0	8564.0	8294.0	3685.0	3622.0	0	0
MA0816.1_shift4 (Ascl2) 
; positions_7nt_m6 versus MA0816.1 (Ascl2); m=13/29; ncol2=10; w=10; offset=2; strand=D; shift=4; score=0.593879; ----arCAGCTGyy----
; cor=; Ncor=
a	0	0	0	0	237.0	128.0	3.0	300.0	7.0	3.0	4.0	0.0	6.0	34.0	0	0	0	0
c	0	0	0	0	36.0	41.0	300.0	0.0	23.0	300.0	0.0	1.0	206.0	101.0	0	0	0	0
g	0	0	0	0	63.0	172.0	0.0	0.0	300.0	2.0	0.0	300.0	15.0	28.0	0	0	0	0
t	0	0	0	0	16.0	1.0	1.0	15.0	18.0	1.0	300.0	2.0	94.0	199.0	0	0	0	0
MA0830.2_rc_shift2 (TCF4_rc) 
; positions_7nt_m6 versus MA0830.2_rc (TCF4_rc); m=14/29; ncol2=13; w=13; offset=0; strand=R; shift=2; score=0.591881; --ssggCAGGTGccg---
; cor=; Ncor=
a	0	0	6827.0	6430.0	6126.0	3555.0	242.0	27398.0	188.0	751.0	512.0	215.0	1737.0	7059.0	6225.0	0	0	0
c	0	0	7662.0	7964.0	4933.0	5281.0	28432.0	679.0	1197.0	1733.0	1295.0	321.0	18498.0	8618.0	7140.0	0	0	0
g	0	0	9843.0	8658.0	12872.0	18935.0	540.0	1016.0	27724.0	26765.0	635.0	28686.0	5062.0	6754.0	10052.0	0	0	0
t	0	0	5133.0	6413.0	5534.0	1694.0	251.0	372.0	356.0	216.0	27023.0	243.0	4168.0	7034.0	6048.0	0	0	0
MA1472.1_rc_shift4 (BHLHA15(var.2)_rc) 
; positions_7nt_m6 versus MA1472.1_rc (BHLHA15(var.2)_rc); m=15/29; ncol2=10; w=10; offset=2; strand=R; shift=4; score=0.565794; ----rrCAGCTGbt----
; cor=; Ncor=
a	0	0	0	0	577.0	1015.0	0.0	1504.0	11.0	467.0	137.0	33.0	81.0	170.0	0	0	0	0
c	0	0	0	0	316.0	489.0	1504.0	0.0	72.0	1504.0	33.0	6.0	591.0	357.0	0	0	0	0
g	0	0	0	0	410.0	610.0	0.0	4.0	1504.0	30.0	33.0	1504.0	607.0	281.0	0	0	0	0
t	0	0	0	0	202.0	54.0	0.0	54.0	445.0	11.0	1504.0	47.0	897.0	697.0	0	0	0	0
MA1100.2_rc_shift4 (ASCL1_rc) 
; positions_7nt_m6 versus MA1100.2_rc (ASCL1_rc); m=16/29; ncol2=10; w=10; offset=2; strand=R; shift=4; score=0.562731; ----rgCAGCTGyy----
; cor=; Ncor=
a	0	0	0	0	1194.0	1349.0	29.0	4413.0	20.0	625.0	218.0	14.0	354.0	726.0	0	0	0	0
c	0	0	0	0	889.0	814.0	4413.0	121.0	1320.0	4413.0	60.0	0.0	3079.0	1495.0	0	0	0	0
g	0	0	0	0	1487.0	3065.0	0.0	24.0	4413.0	1288.0	157.0	4413.0	521.0	926.0	0	0	0	0
t	0	0	0	0	843.0	177.0	52.0	118.0	729.0	107.0	4413.0	0.0	1334.0	1267.0	0	0	0	0
MA1635.1_shift4 (BHLHE22(var.2)) 
; positions_7nt_m6 versus MA1635.1 (BHLHE22(var.2)); m=17/29; ncol2=10; w=10; offset=2; strand=D; shift=4; score=0.559435; ----csCAGCTGsg----
; cor=; Ncor=
a	0	0	0	0	3886.0	4453.0	0.0	18267.0	1.0	14.0	0.0	14.0	1526.0	4398.0	0	0	0	0
c	0	0	0	0	5621.0	5110.0	18331.0	37.0	53.0	18288.0	52.0	15.0	7269.0	4447.0	0	0	0	0
g	0	0	0	0	4447.0	7267.0	11.0	52.0	18288.0	53.0	37.0	18327.0	5112.0	5625.0	0	0	0	0
t	0	0	0	0	4402.0	1526.0	14.0	0.0	14.0	1.0	18267.0	0.0	4449.0	3886.0	0	0	0	0
MA0048.2_shift4 (NHLH1) 
; positions_7nt_m6 versus MA0048.2 (NHLH1); m=18/29; ncol2=10; w=10; offset=2; strand=D; shift=4; score=0.547432; ----cGCAGCTGCk----
; cor=; Ncor=
a	0	0	0	0	788.0	461.0	3.0	2166.0	0.0	96.0	0.0	2.0	296.0	308.0	0	0	0	0
c	0	0	0	0	2166.0	179.0	2166.0	3.0	301.0	2166.0	4.0	4.0	2166.0	736.0	0	0	0	0
g	0	0	0	0	181.0	2166.0	0.0	1.0	2166.0	124.0	4.0	2166.0	102.0	2166.0	0	0	0	0
t	0	0	0	0	111.0	142.0	0.0	0.0	114.0	0.0	2166.0	1.0	350.0	1489.0	0	0	0	0
MA0691.1_shift4 (TFAP4) 
; positions_7nt_m6 versus MA0691.1 (TFAP4); m=19/29; ncol2=10; w=10; offset=2; strand=D; shift=4; score=0.53979; ----AwCAGCTGwT----
; cor=; Ncor=
a	0	0	0	0	3423.0	2159.0	0.0	3423.0	2.0	21.0	1.0	0.0	1810.0	299.0	0	0	0	0
c	0	0	0	0	500.0	546.0	3423.0	2.0	85.0	3423.0	1.0	1.0	114.0	682.0	0	0	0	0
g	0	0	0	0	337.0	62.0	0.0	0.0	3423.0	49.0	0.0	3423.0	333.0	433.0	0	0	0	0
t	0	0	0	0	228.0	1264.0	0.0	0.0	14.0	6.0	3423.0	0.0	1613.0	3423.0	0	0	0	0
MA1467.1_rc_shift4 (ATOH1(var.2)_rc) 
; positions_7nt_m6 versus MA1467.1_rc (ATOH1(var.2)_rc); m=20/29; ncol2=10; w=10; offset=2; strand=R; shift=4; score=0.538782; ----RACAGCTGTT----
; cor=; Ncor=
a	0	0	0	0	426.0	944.0	0.0	1368.0	0.0	181.0	76.0	0.0	0.0	0.0	0	0	0	0
c	0	0	0	0	0.0	35.0	1368.0	0.0	0.0	1368.0	0.0	0.0	182.0	466.0	0	0	0	0
g	0	0	0	0	943.0	296.0	0.0	0.0	1368.0	0.0	0.0	1368.0	179.0	171.0	0	0	0	0
t	0	0	0	0	0.0	93.0	0.0	0.0	204.0	0.0	1368.0	0.0	1008.0	1368.0	0	0	0	0
MA0665.1_shift4 (MSC) 
; positions_7nt_m6 versus MA0665.1 (MSC); m=21/29; ncol2=10; w=10; offset=2; strand=D; shift=4; score=0.538663; ----AACAGCTGTT----
; cor=; Ncor=
a	0	0	0	0	69.0	69.0	0.0	69.0	0.0	0.0	0.0	0.0	3.0	0.0	0	0	0	0
c	0	0	0	0	0.0	12.0	69.0	0.0	12.0	69.0	0.0	0.0	10.0	9.0	0	0	0	0
g	0	0	0	0	18.0	3.0	3.0	0.0	69.0	3.0	0.0	69.0	4.0	4.0	0	0	0	0
t	0	0	0	0	7.0	0.0	1.0	0.0	0.0	0.0	69.0	4.0	69.0	69.0	0	0	0	0
MA1620.1_shift3 (Ptf1a(var.3)) 
; positions_7nt_m6 versus MA1620.1 (Ptf1a(var.3)); m=22/29; ncol2=12; w=12; offset=1; strand=D; shift=3; score=0.537518; ---rmaCACCTGtky---
; cor=; Ncor=
a	0	0	0	2834.0	2613.0	6867.0	184.0	10033.0	116.0	256.0	85.0	68.0	527.0	1678.0	2293.0	0	0	0
c	0	0	0	2469.0	3700.0	1188.0	9887.0	60.0	8567.0	9612.0	94.0	109.0	1615.0	2527.0	3004.0	0	0	0
g	0	0	0	2664.0	2379.0	1410.0	113.0	84.0	1182.0	294.0	98.0	9972.0	1516.0	3341.0	2183.0	0	0	0
t	0	0	0	2324.0	1599.0	826.0	107.0	114.0	426.0	129.0	10014.0	142.0	6633.0	2745.0	2811.0	0	0	0
MA0091.1_shift2 (TAL1::TCF3) 
; positions_7nt_m6 versus MA0091.1 (TAL1::TCF3); m=23/29; ncol2=12; w=12; offset=0; strand=D; shift=2; score=0.535179; --mgAmCAKMTGkT----
; cor=; Ncor=
a	0	0	13.0	9.0	39.0	20.0	0.0	44.0	0.0	12.0	0.0	0.0	0.0	4.0	0	0	0	0
c	0	0	14.0	10.0	0.0	24.0	43.0	0.0	1.0	32.0	0.0	0.0	3.0	4.0	0	0	0	0
g	0	0	8.0	20.0	3.0	0.0	1.0	0.0	11.0	0.0	0.0	43.0	20.0	2.0	0	0	0	0
t	0	0	9.0	5.0	2.0	0.0	0.0	0.0	32.0	0.0	44.0	1.0	21.0	34.0	0	0	0	0
MA1648.1_shift4 (TCF12(var.2)) 
; positions_7nt_m6 versus MA1648.1 (TCF12(var.2)); m=24/29; ncol2=11; w=11; offset=2; strand=D; shift=4; score=0.524826; ----ssCACCTGCys---
; cor=; Ncor=
a	0	0	0	0	13014.0	14835.0	955.0	52529.0	744.0	1913.0	1380.0	2819.0	1089.0	13867.0	11414.0	0	0	0
c	0	0	0	0	19393.0	17594.0	57848.0	2007.0	55598.0	55765.0	3886.0	2088.0	55061.0	17603.0	18154.0	0	0	0
g	0	0	0	0	16996.0	18560.0	1186.0	5607.0	3780.0	3536.0	2625.0	55922.0	2314.0	14293.0	20060.0	0	0	0
t	0	0	0	0	12473.0	10887.0	1887.0	1733.0	1754.0	662.0	53985.0	1047.0	3412.0	16113.0	12248.0	0	0	0
MA0522.3_shift4 (TCF3) 
; positions_7nt_m6 versus MA0522.3 (TCF3); m=25/29; ncol2=11; w=11; offset=2; strand=D; shift=4; score=0.520203; ----svCACCTGCss---
; cor=; Ncor=
a	0	0	0	0	6270.0	8032.0	469.0	28916.0	309.0	1127.0	380.0	1089.0	295.0	7276.0	5485.0	0	0	0
c	0	0	0	0	10212.0	9269.0	29379.0	396.0	28640.0	27199.0	2003.0	1038.0	28742.0	8727.0	10122.0	0	0	0
g	0	0	0	0	8539.0	9432.0	708.0	1574.0	1362.0	2652.0	1339.0	28642.0	987.0	8025.0	9222.0	0	0	0
t	0	0	0	0	6240.0	4528.0	705.0	375.0	950.0	283.0	27539.0	492.0	1237.0	7233.0	6432.0	0	0	0
MA0667.1_rc_shift4 (MYF6_rc) 
; positions_7nt_m6 versus MA0667.1_rc (MYF6_rc); m=26/29; ncol2=10; w=10; offset=2; strand=R; shift=4; score=0.502551; ----RACAGyTGTT----
; cor=; Ncor=
a	0	0	0	0	444.0	444.0	0.0	444.0	56.0	12.0	0.0	0.0	1.0	7.0	0	0	0	0
c	0	0	0	0	7.0	0.0	444.0	0.0	35.0	256.0	7.0	0.0	24.0	70.0	0	0	0	0
g	0	0	0	0	159.0	22.0	2.0	0.0	353.0	30.0	3.0	444.0	18.0	12.0	0	0	0	0
t	0	0	0	0	0.0	2.0	0.0	11.0	12.0	159.0	444.0	0.0	444.0	444.0	0	0	0	0
MA0820.1_rc_shift4 (FIGLA_rc) 
; positions_7nt_m6 versus MA0820.1_rc (FIGLA_rc); m=27/29; ncol2=10; w=10; offset=2; strand=R; shift=4; score=0.474101; ----wmCAGGTGkw----
; cor=; Ncor=
a	0	0	0	0	753.0	832.0	65.0	1780.0	0.0	0.0	14.0	29.0	237.0	449.0	0	0	0	0
c	0	0	0	0	289.0	569.0	1780.0	17.0	311.0	527.0	0.0	0.0	160.0	175.0	0	0	0	0
g	0	0	0	0	283.0	225.0	33.0	0.0	1780.0	1780.0	46.0	1780.0	693.0	270.0	0	0	0	0
t	0	0	0	0	455.0	154.0	36.0	56.0	9.0	0.0	1780.0	0.0	690.0	886.0	0	0	0	0
MA1559.1_shift4 (SNAI3) 
; positions_7nt_m6 versus MA1559.1 (SNAI3); m=28/29; ncol2=10; w=10; offset=2; strand=D; shift=4; score=0.461095; ----arCAGGTGya----
; cor=; Ncor=
a	0	0	0	0	2952.0	3917.0	23.0	6248.0	118.0	0.0	0.0	94.0	432.0	4680.0	0	0	0	0
c	0	0	0	0	661.0	0.0	6248.0	0.0	29.0	18.0	12.0	0.0	6248.0	688.0	0	0	0	0
g	0	0	0	0	1525.0	2331.0	0.0	34.0	6248.0	6248.0	28.0	6248.0	1701.0	1569.0	0	0	0	0
t	0	0	0	0	1110.0	183.0	35.0	3.0	43.0	0.0	6248.0	30.0	3161.0	553.0	0	0	0	0
MA1558.1_rc_shift4 (SNAI1_rc) 
; positions_7nt_m6 versus MA1558.1_rc (SNAI1_rc); m=29/29; ncol2=10; w=10; offset=2; strand=R; shift=4; score=0.452023; ----yrCACCTGyh----
; cor=; Ncor=
a	0	0	0	0	6356.0	9044.0	311.0	19982.0	28.0	306.0	568.0	340.0	3518.0	5112.0	0	0	0	0
c	0	0	0	0	9894.0	5306.0	19982.0	42.0	19982.0	19982.0	91.0	275.0	12989.0	6410.0	0	0	0	0
g	0	0	0	0	4592.0	10938.0	0.0	0.0	5.0	517.0	297.0	19982.0	501.0	3187.0	0	0	0	0
t	0	0	0	0	10088.0	1639.0	706.0	38.0	72.0	1766.0	19982.0	446.0	6993.0	5274.0	0	0	0	0