One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 Myogenin_Rep3_motifs50/results/discovered_motifs/oligos_6nt_mkv2_m9/peak-motifs_oligos_6nt_mkv2_m9.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o Myogenin_Rep3_motifs50/results/discovered_motifs/oligos_6nt_mkv2_m9/peak-motifs_oligos_6nt_mkv2_m9_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv2_m9_shift6 ; 31 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv2_m9_shift6 (oligos_6nt_mkv2_m9oligos_6nt_mkv2_m9)
; oligos_6nt_mkv2_m9 (oligos_6nt_mkv2_m9oligos_6nt_mkv2_m9); m=0 (reference); ncol1=10; shift=6; ncol=16; ------rrAGGTGGaa ; Alignment reference a 0 0 0 0 0 0 24 16 41 0 0 0 0 0 17 25 c 0 0 0 0 0 0 4 10 0 0 0 0 0 0 10 5 g 0 0 0 0 0 0 12 11 0 41 41 0 41 41 7 5 t 0 0 0 0 0 0 1 4 0 0 0 41 0 0 7 6

MA0820.1_rc_shift5 (FIGLA_rc)
; oligos_6nt_mkv2_m9 versus MA0820.1_rc (FIGLA_rc); m=1/30; ncol2=10; w=9; offset=-1; strand=R; shift=5; score=0.668277; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0

MA1559.1_shift5 (SNAI3)
; oligos_6nt_mkv2_m9 versus MA1559.1 (SNAI3); m=2/30; ncol2=10; w=9; offset=-1; strand=D; shift=5; score=0.651668; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0

MA1558.1_shift5 (SNAI1)
; oligos_6nt_mkv2_m9 versus MA1558.1 (SNAI1); m=3/30; ncol2=10; w=9; offset=-1; strand=D; shift=5; score=0.649624; -----drCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 5274.0 6993.0 446.0 19982.0 1766.0 72.0 38.0 706.0 1639.0 10088.0 0 c 0 0 0 0 0 3187.0 501.0 19982.0 297.0 517.0 5.0 0.0 0.0 10938.0 4592.0 0 g 0 0 0 0 0 6410.0 12989.0 275.0 91.0 19982.0 19982.0 42.0 19982.0 5306.0 9894.0 0 t 0 0 0 0 0 5112.0 3518.0 340.0 568.0 306.0 28.0 19982.0 311.0 9044.0 6356.0 0

MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)
; oligos_6nt_mkv2_m9 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=4/30; ncol2=12; w=10; offset=-2; strand=R; shift=4; score=0.620563; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0

MA1565.1_shift6 (TBX18)
; oligos_6nt_mkv2_m9 versus MA1565.1 (TBX18); m=5/30; ncol2=12; w=10; offset=0; strand=D; shift=6; score=0.619108; ------rrAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 216.0 343.0 778.0 73.0 14.0 7.0 21.0 100.0 52.0 778.0 c 0 0 0 0 0 0 86.0 103.0 62.0 57.0 0.0 80.0 6.0 98.0 161.0 1.0 g 0 0 0 0 0 0 316.0 435.0 159.0 778.0 778.0 0.0 778.0 109.0 778.0 5.0 t 0 0 0 0 0 0 160.0 148.0 59.0 47.0 0.0 778.0 2.0 778.0 32.0 34.0

MA0807.1_shift8 (TBX5)
; oligos_6nt_mkv2_m9 versus MA0807.1 (TBX5); m=6/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.615418; --------AGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1804.0 235.0 0.0 45.0 27.0 162.0 126.0 1804.0 c 0 0 0 0 0 0 0 0 89.0 190.0 0.0 131.0 0.0 225.0 616.0 76.0 g 0 0 0 0 0 0 0 0 409.0 1804.0 1804.0 166.0 1804.0 201.0 1804.0 343.0 t 0 0 0 0 0 0 0 0 207.0 133.0 28.0 1804.0 0.0 1804.0 915.0 283.0

MA0103.3_rc_shift4 (ZEB1_rc)
; oligos_6nt_mkv2_m9 versus MA0103.3_rc (ZEB1_rc); m=7/30; ncol2=11; w=9; offset=-2; strand=R; shift=4; score=0.602155; ----sssCAGGTGss- ; cor=; Ncor= a 0 0 0 0 3856.0 3153.0 3408.0 129.0 19269.0 30.0 122.0 1.0 662.0 4715.0 3692.0 0 c 0 0 0 0 5828.0 6601.0 5178.0 19381.0 355.0 649.0 97.0 223.0 158.0 5179.0 5228.0 0 g 0 0 0 0 6955.0 6117.0 9561.0 178.0 501.0 19257.0 19878.0 0.0 19195.0 5550.0 7998.0 0 t 0 0 0 0 3490.0 4258.0 1982.0 441.0 4.0 193.0 32.0 19905.0 114.0 4685.0 3211.0 0

MA1567.1_shift7 (TBX6)
; oligos_6nt_mkv2_m9 versus MA1567.1 (TBX6); m=8/30; ncol2=10; w=9; offset=1; strand=D; shift=7; score=0.60114; -------ragGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 2998.0 11087.0 1882.0 58.0 44.0 14.0 552.0 1430.0 11087.0 c 0 0 0 0 0 0 0 1630.0 1173.0 2913.0 63.0 1002.0 0.0 3053.0 4876.0 652.0 g 0 0 0 0 0 0 0 4003.0 3347.0 11087.0 11087.0 0.0 11087.0 320.0 11087.0 2251.0 t 0 0 0 0 0 0 0 2456.0 2157.0 1058.0 0.0 11087.0 12.0 11087.0 5964.0 713.0

MA0806.1_shift8 (TBX4)
; oligos_6nt_mkv2_m9 versus MA0806.1 (TBX4); m=9/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.600945; --------AGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18646.0 3082.0 38.0 0.0 0.0 1551.0 1355.0 18646.0 c 0 0 0 0 0 0 0 0 437.0 2328.0 189.0 1644.0 0.0 2859.0 5396.0 588.0 g 0 0 0 0 0 0 0 0 2353.0 18646.0 18646.0 191.0 18646.0 304.0 18646.0 1733.0 t 0 0 0 0 0 0 0 0 1283.0 1162.0 33.0 18646.0 0.0 18646.0 8384.0 965.0

MA0745.2_rc_shift3 (SNAI2_rc)
; oligos_6nt_mkv2_m9 versus MA0745.2_rc (SNAI2_rc); m=10/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.59573; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0

MA0803.1_shift8 (TBX15)
; oligos_6nt_mkv2_m9 versus MA0803.1 (TBX15); m=11/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.583265; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10502.0 458.0 19.0 61.0 0.0 140.0 44.0 10502.0 c 0 0 0 0 0 0 0 0 74.0 101.0 7.0 175.0 8.0 435.0 454.0 71.0 g 0 0 0 0 0 0 0 0 664.0 10502.0 10502.0 245.0 10502.0 324.0 10502.0 306.0 t 0 0 0 0 0 0 0 0 112.0 103.0 0.0 10502.0 0.0 10502.0 937.0 96.0

MA0690.1_shift7 (TBX21)
; oligos_6nt_mkv2_m9 versus MA0690.1 (TBX21); m=12/30; ncol2=10; w=9; offset=1; strand=D; shift=7; score=0.578696; -------aAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 2322.0 4395.0 612.0 2.0 6.0 1.0 185.0 80.0 4395.0 c 0 0 0 0 0 0 0 263.0 30.0 239.0 17.0 180.0 0.0 331.0 126.0 0.0 g 0 0 0 0 0 0 0 937.0 359.0 4395.0 4395.0 16.0 4395.0 34.0 4395.0 38.0 t 0 0 0 0 0 0 0 872.0 146.0 398.0 33.0 4395.0 2.0 4395.0 364.0 0.0

MA0499.2_rc_shift3 (MYOD1_rc)
; oligos_6nt_mkv2_m9 versus MA0499.2_rc (MYOD1_rc); m=13/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.574687; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0

MA1566.1_shift7 (TBX3)
; oligos_6nt_mkv2_m9 versus MA1566.1 (TBX3); m=14/30; ncol2=10; w=9; offset=1; strand=D; shift=7; score=0.57307; -------ragGTGTsa ; cor=; Ncor= a 0 0 0 0 0 0 0 644.0 2544.0 427.0 6.0 16.0 0.0 115.0 170.0 2544.0 c 0 0 0 0 0 0 0 399.0 481.0 862.0 45.0 735.0 0.0 634.0 1471.0 410.0 g 0 0 0 0 0 0 0 1003.0 1207.0 2544.0 2544.0 0.0 2544.0 155.0 2544.0 947.0 t 0 0 0 0 0 0 0 497.0 760.0 302.0 0.0 2544.0 0.0 2544.0 1112.0 484.0

MA1648.1_rc_shift4 (TCF12(var.2)_rc)
; oligos_6nt_mkv2_m9 versus MA1648.1_rc (TCF12(var.2)_rc); m=15/30; ncol2=11; w=9; offset=-2; strand=R; shift=4; score=0.569082; ----srGCAGGTGss- ; cor=; Ncor= a 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 0 c 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 0 g 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 0 t 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0 0

MA0522.3_rc_shift4 (TCF3_rc)
; oligos_6nt_mkv2_m9 versus MA0522.3_rc (TCF3_rc); m=16/30; ncol2=11; w=9; offset=-2; strand=R; shift=4; score=0.568943; ----ssGCAGGTGbs- ; cor=; Ncor= a 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 0 c 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 0 g 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 0 t 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0 0

MA0805.1_shift8 (TBX1)
; oligos_6nt_mkv2_m9 versus MA0805.1 (TBX1); m=17/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.567628; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11931.0 1560.0 0.0 28.0 0.0 142.0 141.0 11931.0 c 0 0 0 0 0 0 0 0 113.0 711.0 0.0 214.0 5.0 613.0 720.0 33.0 g 0 0 0 0 0 0 0 0 1007.0 11931.0 11931.0 141.0 11931.0 109.0 11931.0 18.0 t 0 0 0 0 0 0 0 0 564.0 669.0 0.0 11931.0 0.0 11931.0 1039.0 0.0

MA0830.2_rc_shift3 (TCF4_rc)
; oligos_6nt_mkv2_m9 versus MA0830.2_rc (TCF4_rc); m=18/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.562427; ---ssggCAGGTGccg ; cor=; Ncor= a 0 0 0 6827.0 6430.0 6126.0 3555.0 242.0 27398.0 188.0 751.0 512.0 215.0 1737.0 7059.0 6225.0 c 0 0 0 7662.0 7964.0 4933.0 5281.0 28432.0 679.0 1197.0 1733.0 1295.0 321.0 18498.0 8618.0 7140.0 g 0 0 0 9843.0 8658.0 12872.0 18935.0 540.0 1016.0 27724.0 26765.0 635.0 28686.0 5062.0 6754.0 10052.0 t 0 0 0 5133.0 6413.0 5534.0 1694.0 251.0 372.0 356.0 216.0 27023.0 243.0 4168.0 7034.0 6048.0

MA1631.1_rc_shift3 (ASCL1(var.2)_rc)
; oligos_6nt_mkv2_m9 versus MA1631.1_rc (ASCL1(var.2)_rc); m=19/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.559186; ---gsrGCAGGTGchg ; cor=; Ncor= a 0 0 0 8032.0 7779.0 9017.0 2394.0 249.0 32756.0 151.0 815.0 618.0 289.0 3290.0 8805.0 7347.0 c 0 0 0 8356.0 8939.0 2966.0 2719.0 33411.0 492.0 607.0 3209.0 860.0 321.0 18576.0 8601.0 8371.0 g 0 0 0 11996.0 10555.0 17883.0 28844.0 445.0 740.0 33402.0 30169.0 563.0 33562.0 6654.0 7998.0 11805.0 t 0 0 0 5972.0 7083.0 4490.0 399.0 251.0 368.0 196.0 163.0 32315.0 184.0 5836.0 8952.0 6833.0

MA1109.1_shift4 (NEUROD1)
; oligos_6nt_mkv2_m9 versus MA1109.1 (NEUROD1); m=20/30; ncol2=13; w=10; offset=-2; strand=D; shift=4; score=0.546984; ----graCAGATGGyr ; cor=; Ncor= a 0 0 0 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 c 0 0 0 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 g 0 0 0 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 t 0 0 0 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0

MA0688.1_shift7 (TBX2)
; oligos_6nt_mkv2_m9 versus MA0688.1 (TBX2); m=21/30; ncol2=11; w=9; offset=1; strand=D; shift=7; score=0.545943; -------wAGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 1258.0 3181.0 602.0 9.0 0.0 26.0 307.0 310.0 3181.0 c 0 0 0 0 0 0 0 402.0 59.0 519.0 36.0 329.0 0.0 392.0 1289.0 26.0 g 0 0 0 0 0 0 0 717.0 716.0 3181.0 3181.0 21.0 3181.0 27.0 3181.0 125.0 t 0 0 0 0 0 0 0 804.0 442.0 353.0 14.0 3181.0 12.0 3181.0 1409.0 120.0

MA1621.1_rc_shift3 (Rbpjl_rc)
; oligos_6nt_mkv2_m9 versus MA1621.1_rc (Rbpjl_rc); m=22/30; ncol2=14; w=10; offset=-3; strand=R; shift=3; score=0.540536; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0

MA0130.1_rc_shift10 (ZNF354C_rc)
; oligos_6nt_mkv2_m9 versus MA0130.1_rc (ZNF354C_rc); m=23/30; ncol2=6; w=6; offset=4; strand=R; shift=10; score=0.538134; ----------GTGGAk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 11.0 0.0 c 0 0 0 0 0 0 0 0 0 0 1.0 0.0 0.0 0.0 0.0 3.0 g 0 0 0 0 0 0 0 0 0 0 15.0 0.0 16.0 16.0 2.0 6.0 t 0 0 0 0 0 0 0 0 0 0 0.0 16.0 0.0 0.0 3.0 7.0

MA0689.1_shift7 (TBX20)
; oligos_6nt_mkv2_m9 versus MA0689.1 (TBX20); m=24/30; ncol2=11; w=9; offset=1; strand=D; shift=7; score=0.525152; -------wAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 197.0 572.0 50.0 0.0 0.0 0.0 8.0 48.0 572.0 c 0 0 0 0 0 0 0 4.0 23.0 34.0 0.0 0.0 1.0 1.0 10.0 1.0 g 0 0 0 0 0 0 0 121.0 54.0 572.0 572.0 10.0 572.0 11.0 572.0 6.0 t 0 0 0 0 0 0 0 250.0 24.0 26.0 40.0 572.0 4.0 572.0 82.0 10.0

MA0743.2_shift0 (SCRT1)
; oligos_6nt_mkv2_m9 versus MA0743.2 (SCRT1); m=25/30; ncol2=16; w=10; offset=-6; strand=D; shift=0; score=0.503465; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0

MA0744.2_shift0 (SCRT2)
; oligos_6nt_mkv2_m9 versus MA0744.2 (SCRT2); m=26/30; ncol2=16; w=10; offset=-6; strand=D; shift=0; score=0.487417; rrwkCAACAGGTggtw ; cor=; Ncor= a 18855.0 23310.0 29945.0 5353.0 1378.0 53425.0 62366.0 231.0 63880.0 7306.0 1862.0 2078.0 10481.0 13383.0 16058.0 17881.0 c 13345.0 12732.0 6319.0 7236.0 59161.0 5536.0 413.0 64856.0 294.0 728.0 972.0 3475.0 5661.0 11351.0 16085.0 13846.0 g 17680.0 17497.0 12473.0 35769.0 1339.0 2265.0 1878.0 319.0 252.0 56105.0 60636.0 1168.0 38133.0 25288.0 14716.0 12430.0 t 15730.0 12071.0 16873.0 17252.0 3732.0 4384.0 953.0 204.0 1184.0 1471.0 2140.0 58889.0 11335.0 15588.0 18751.0 21453.0

MA0802.1_shift8 (TBR1)
; oligos_6nt_mkv2_m9 versus MA0802.1 (TBR1); m=27/30; ncol2=10; w=8; offset=2; strand=D; shift=8; score=0.480258; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 34509.0 6880.0 70.0 39.0 0.0 2386.0 1175.0 34509.0 c 0 0 0 0 0 0 0 0 359.0 3255.0 254.0 1759.0 6.0 4742.0 2551.0 90.0 g 0 0 0 0 0 0 0 0 3329.0 34509.0 34509.0 88.0 34509.0 157.0 34509.0 584.0 t 0 0 0 0 0 0 0 0 1433.0 4480.0 213.0 34509.0 4.0 34509.0 7001.0 205.0

MA1601.1_shift8 (ZNF75D)
; oligos_6nt_mkv2_m9 versus MA1601.1 (ZNF75D); m=28/30; ncol2=10; w=8; offset=2; strand=D; shift=8; score=0.472846; --------rtGTGGGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2111.0 1057.0 2.0 10.0 26.0 46.0 24.0 6706.0 c 0 0 0 0 0 0 0 0 1573.0 715.0 0.0 59.0 18.0 44.0 29.0 20.0 g 0 0 0 0 0 0 0 0 1850.0 1468.0 6757.0 4.0 6710.0 6545.0 6678.0 15.0 t 0 0 0 0 0 0 0 0 1225.0 3519.0 0.0 6686.0 5.0 124.0 28.0 18.0

MA0800.1_shift7 (EOMES)
; oligos_6nt_mkv2_m9 versus MA0800.1 (EOMES); m=29/30; ncol2=13; w=9; offset=1; strand=D; shift=7; score=0.453135; -------aAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 4526.0 9832.0 1775.0 23.0 19.0 9.0 495.0 210.0 9832.0 c 0 0 0 0 0 0 0 911.0 158.0 1004.0 92.0 600.0 8.0 1540.0 550.0 28.0 g 0 0 0 0 0 0 0 2274.0 1259.0 9832.0 9832.0 50.0 9832.0 98.0 9832.0 99.0 t 0 0 0 0 0 0 0 2122.0 653.0 1305.0 94.0 9832.0 3.0 9832.0 980.0 24.0

MA0513.1_rc_shift8 (SMAD2::SMAD3::SMAD4_rc)
; oligos_6nt_mkv2_m9 versus MA0513.1_rc (SMAD2::SMAD3::SMAD4_rc); m=30/30; ncol2=13; w=8; offset=2; strand=R; shift=8; score=0.40676; --------agGTGmsA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 540.0 152.0 0.0 97.0 0.0 283.0 23.0 899.0 c 0 0 0 0 0 0 0 0 35.0 47.0 133.0 18.0 3.0 280.0 539.0 0.0 g 0 0 0 0 0 0 0 0 214.0 583.0 736.0 19.0 896.0 125.0 231.0 0.0 t 0 0 0 0 0 0 0 0 110.0 117.0 30.0 765.0 0.0 211.0 106.0 0.0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv2_m9_shift6 (oligos_6nt_mkv2_m9oligos_6nt_mkv2_m9)				; oligos_6nt_mkv2_m9 (oligos_6nt_mkv2_m9oligos_6nt_mkv2_m9); m=0 (reference); ncol1=10; shift=6; ncol=16; ------rrAGGTGGaa ; Alignment reference a 0 0 0 0 0 0 24 16 41 0 0 0 0 0 17 25 c 0 0 0 0 0 0 4 10 0 0 0 0 0 0 10 5 g 0 0 0 0 0 0 12 11 0 41 41 0 41 41 7 5 t 0 0 0 0 0 0 1 4 0 0 0 41 0 0 7 6
MA0820.1_rc_shift5 (FIGLA_rc)				; oligos_6nt_mkv2_m9 versus MA0820.1_rc (FIGLA_rc); m=1/30; ncol2=10; w=9; offset=-1; strand=R; shift=5; score=0.668277; -----wmCAGGTGkw- ; cor=; Ncor= a 0 0 0 0 0 753.0 832.0 65.0 1780.0 0.0 0.0 14.0 29.0 237.0 449.0 0 c 0 0 0 0 0 289.0 569.0 1780.0 17.0 311.0 527.0 0.0 0.0 160.0 175.0 0 g 0 0 0 0 0 283.0 225.0 33.0 0.0 1780.0 1780.0 46.0 1780.0 693.0 270.0 0 t 0 0 0 0 0 455.0 154.0 36.0 56.0 9.0 0.0 1780.0 0.0 690.0 886.0 0
MA1559.1_shift5 (SNAI3)				; oligos_6nt_mkv2_m9 versus MA1559.1 (SNAI3); m=2/30; ncol2=10; w=9; offset=-1; strand=D; shift=5; score=0.651668; -----arCAGGTGya- ; cor=; Ncor= a 0 0 0 0 0 2952.0 3917.0 23.0 6248.0 118.0 0.0 0.0 94.0 432.0 4680.0 0 c 0 0 0 0 0 661.0 0.0 6248.0 0.0 29.0 18.0 12.0 0.0 6248.0 688.0 0 g 0 0 0 0 0 1525.0 2331.0 0.0 34.0 6248.0 6248.0 28.0 6248.0 1701.0 1569.0 0 t 0 0 0 0 0 1110.0 183.0 35.0 3.0 43.0 0.0 6248.0 30.0 3161.0 553.0 0
MA1558.1_shift5 (SNAI1)				; oligos_6nt_mkv2_m9 versus MA1558.1 (SNAI1); m=3/30; ncol2=10; w=9; offset=-1; strand=D; shift=5; score=0.649624; -----drCAGGTGyr- ; cor=; Ncor= a 0 0 0 0 0 5274.0 6993.0 446.0 19982.0 1766.0 72.0 38.0 706.0 1639.0 10088.0 0 c 0 0 0 0 0 3187.0 501.0 19982.0 297.0 517.0 5.0 0.0 0.0 10938.0 4592.0 0 g 0 0 0 0 0 6410.0 12989.0 275.0 91.0 19982.0 19982.0 42.0 19982.0 5306.0 9894.0 0 t 0 0 0 0 0 5112.0 3518.0 340.0 568.0 306.0 28.0 19982.0 311.0 9044.0 6356.0 0
MA1620.1_rc_shift4 (Ptf1a(var.3)_rc)				; oligos_6nt_mkv2_m9 versus MA1620.1_rc (Ptf1a(var.3)_rc); m=4/30; ncol2=12; w=10; offset=-2; strand=R; shift=4; score=0.620563; ----rmaCAGGTGtky ; cor=; Ncor= a 0 0 0 0 2811.0 2745.0 6633.0 142.0 10014.0 129.0 426.0 114.0 107.0 826.0 1599.0 2324.0 c 0 0 0 0 2183.0 3341.0 1516.0 9972.0 98.0 294.0 1182.0 84.0 113.0 1410.0 2379.0 2664.0 g 0 0 0 0 3004.0 2527.0 1615.0 109.0 94.0 9612.0 8567.0 60.0 9887.0 1188.0 3700.0 2469.0 t 0 0 0 0 2293.0 1678.0 527.0 68.0 85.0 256.0 116.0 10033.0 184.0 6867.0 2613.0 2834.0
MA1565.1_shift6 (TBX18)				; oligos_6nt_mkv2_m9 versus MA1565.1 (TBX18); m=5/30; ncol2=12; w=10; offset=0; strand=D; shift=6; score=0.619108; ------rrAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 216.0 343.0 778.0 73.0 14.0 7.0 21.0 100.0 52.0 778.0 c 0 0 0 0 0 0 86.0 103.0 62.0 57.0 0.0 80.0 6.0 98.0 161.0 1.0 g 0 0 0 0 0 0 316.0 435.0 159.0 778.0 778.0 0.0 778.0 109.0 778.0 5.0 t 0 0 0 0 0 0 160.0 148.0 59.0 47.0 0.0 778.0 2.0 778.0 32.0 34.0
MA0807.1_shift8 (TBX5)				; oligos_6nt_mkv2_m9 versus MA0807.1 (TBX5); m=6/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.615418; --------AGGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 1804.0 235.0 0.0 45.0 27.0 162.0 126.0 1804.0 c 0 0 0 0 0 0 0 0 89.0 190.0 0.0 131.0 0.0 225.0 616.0 76.0 g 0 0 0 0 0 0 0 0 409.0 1804.0 1804.0 166.0 1804.0 201.0 1804.0 343.0 t 0 0 0 0 0 0 0 0 207.0 133.0 28.0 1804.0 0.0 1804.0 915.0 283.0
MA0103.3_rc_shift4 (ZEB1_rc)				; oligos_6nt_mkv2_m9 versus MA0103.3_rc (ZEB1_rc); m=7/30; ncol2=11; w=9; offset=-2; strand=R; shift=4; score=0.602155; ----sssCAGGTGss- ; cor=; Ncor= a 0 0 0 0 3856.0 3153.0 3408.0 129.0 19269.0 30.0 122.0 1.0 662.0 4715.0 3692.0 0 c 0 0 0 0 5828.0 6601.0 5178.0 19381.0 355.0 649.0 97.0 223.0 158.0 5179.0 5228.0 0 g 0 0 0 0 6955.0 6117.0 9561.0 178.0 501.0 19257.0 19878.0 0.0 19195.0 5550.0 7998.0 0 t 0 0 0 0 3490.0 4258.0 1982.0 441.0 4.0 193.0 32.0 19905.0 114.0 4685.0 3211.0 0
MA1567.1_shift7 (TBX6)				; oligos_6nt_mkv2_m9 versus MA1567.1 (TBX6); m=8/30; ncol2=10; w=9; offset=1; strand=D; shift=7; score=0.60114; -------ragGTGTkA ; cor=; Ncor= a 0 0 0 0 0 0 0 2998.0 11087.0 1882.0 58.0 44.0 14.0 552.0 1430.0 11087.0 c 0 0 0 0 0 0 0 1630.0 1173.0 2913.0 63.0 1002.0 0.0 3053.0 4876.0 652.0 g 0 0 0 0 0 0 0 4003.0 3347.0 11087.0 11087.0 0.0 11087.0 320.0 11087.0 2251.0 t 0 0 0 0 0 0 0 2456.0 2157.0 1058.0 0.0 11087.0 12.0 11087.0 5964.0 713.0
MA0806.1_shift8 (TBX4)				; oligos_6nt_mkv2_m9 versus MA0806.1 (TBX4); m=9/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.600945; --------AGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 18646.0 3082.0 38.0 0.0 0.0 1551.0 1355.0 18646.0 c 0 0 0 0 0 0 0 0 437.0 2328.0 189.0 1644.0 0.0 2859.0 5396.0 588.0 g 0 0 0 0 0 0 0 0 2353.0 18646.0 18646.0 191.0 18646.0 304.0 18646.0 1733.0 t 0 0 0 0 0 0 0 0 1283.0 1162.0 33.0 18646.0 0.0 18646.0 8384.0 965.0
MA0745.2_rc_shift3 (SNAI2_rc)				; oligos_6nt_mkv2_m9 versus MA0745.2_rc (SNAI2_rc); m=10/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.59573; ---rykACAGGTGcrt ; cor=; Ncor= a 0 0 0 17906.0 8917.0 8747.0 37272.0 126.0 45229.0 344.0 234.0 227.0 622.0 2359.0 16344.0 9958.0 c 0 0 0 8219.0 12297.0 6281.0 1263.0 45257.0 196.0 487.0 326.0 424.0 323.0 26742.0 9490.0 11169.0 g 0 0 0 13476.0 11016.0 18771.0 6467.0 254.0 313.0 44739.0 45144.0 202.0 44463.0 6393.0 12314.0 10031.0 t 0 0 0 6215.0 13586.0 12017.0 814.0 179.0 78.0 246.0 112.0 44963.0 408.0 10322.0 7668.0 14658.0
MA0803.1_shift8 (TBX15)				; oligos_6nt_mkv2_m9 versus MA0803.1 (TBX15); m=11/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.583265; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 10502.0 458.0 19.0 61.0 0.0 140.0 44.0 10502.0 c 0 0 0 0 0 0 0 0 74.0 101.0 7.0 175.0 8.0 435.0 454.0 71.0 g 0 0 0 0 0 0 0 0 664.0 10502.0 10502.0 245.0 10502.0 324.0 10502.0 306.0 t 0 0 0 0 0 0 0 0 112.0 103.0 0.0 10502.0 0.0 10502.0 937.0 96.0
MA0690.1_shift7 (TBX21)				; oligos_6nt_mkv2_m9 versus MA0690.1 (TBX21); m=12/30; ncol2=10; w=9; offset=1; strand=D; shift=7; score=0.578696; -------aAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 2322.0 4395.0 612.0 2.0 6.0 1.0 185.0 80.0 4395.0 c 0 0 0 0 0 0 0 263.0 30.0 239.0 17.0 180.0 0.0 331.0 126.0 0.0 g 0 0 0 0 0 0 0 937.0 359.0 4395.0 4395.0 16.0 4395.0 34.0 4395.0 38.0 t 0 0 0 0 0 0 0 872.0 146.0 398.0 33.0 4395.0 2.0 4395.0 364.0 0.0
MA0499.2_rc_shift3 (MYOD1_rc)				; oligos_6nt_mkv2_m9 versus MA0499.2_rc (MYOD1_rc); m=13/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.574687; ---rkrACAGGTGcwg ; cor=; Ncor= a 0 0 0 9358.0 8151.0 9000.0 29644.0 238.0 33130.0 330.0 1226.0 587.0 269.0 2245.0 9291.0 7728.0 c 0 0 0 7495.0 6202.0 4440.0 1699.0 33468.0 366.0 932.0 7336.0 849.0 354.0 21884.0 8444.0 8118.0 g 0 0 0 11760.0 10485.0 19052.0 2555.0 386.0 563.0 32504.0 25275.0 583.0 33328.0 5622.0 7103.0 11279.0 t 0 0 0 5687.0 9462.0 1808.0 402.0 208.0 241.0 534.0 463.0 32281.0 349.0 4549.0 9462.0 7175.0
MA1566.1_shift7 (TBX3)				; oligos_6nt_mkv2_m9 versus MA1566.1 (TBX3); m=14/30; ncol2=10; w=9; offset=1; strand=D; shift=7; score=0.57307; -------ragGTGTsa ; cor=; Ncor= a 0 0 0 0 0 0 0 644.0 2544.0 427.0 6.0 16.0 0.0 115.0 170.0 2544.0 c 0 0 0 0 0 0 0 399.0 481.0 862.0 45.0 735.0 0.0 634.0 1471.0 410.0 g 0 0 0 0 0 0 0 1003.0 1207.0 2544.0 2544.0 0.0 2544.0 155.0 2544.0 947.0 t 0 0 0 0 0 0 0 497.0 760.0 302.0 0.0 2544.0 0.0 2544.0 1112.0 484.0
MA1648.1_rc_shift4 (TCF12(var.2)_rc)				; oligos_6nt_mkv2_m9 versus MA1648.1_rc (TCF12(var.2)_rc); m=15/30; ncol2=11; w=9; offset=-2; strand=R; shift=4; score=0.569082; ----srGCAGGTGss- ; cor=; Ncor= a 0 0 0 0 12248.0 16113.0 3412.0 1047.0 53985.0 662.0 1754.0 1733.0 1887.0 10887.0 12473.0 0 c 0 0 0 0 20060.0 14293.0 2314.0 55922.0 2625.0 3536.0 3780.0 5607.0 1186.0 18560.0 16996.0 0 g 0 0 0 0 18154.0 17603.0 55061.0 2088.0 3886.0 55765.0 55598.0 2007.0 57848.0 17594.0 19393.0 0 t 0 0 0 0 11414.0 13867.0 1089.0 2819.0 1380.0 1913.0 744.0 52529.0 955.0 14835.0 13014.0 0
MA0522.3_rc_shift4 (TCF3_rc)				; oligos_6nt_mkv2_m9 versus MA0522.3_rc (TCF3_rc); m=16/30; ncol2=11; w=9; offset=-2; strand=R; shift=4; score=0.568943; ----ssGCAGGTGbs- ; cor=; Ncor= a 0 0 0 0 6432.0 7233.0 1237.0 492.0 27539.0 283.0 950.0 375.0 705.0 4528.0 6240.0 0 c 0 0 0 0 9222.0 8025.0 987.0 28642.0 1339.0 2652.0 1362.0 1574.0 708.0 9432.0 8539.0 0 g 0 0 0 0 10122.0 8727.0 28742.0 1038.0 2003.0 27199.0 28640.0 396.0 29379.0 9269.0 10212.0 0 t 0 0 0 0 5485.0 7276.0 295.0 1089.0 380.0 1127.0 309.0 28916.0 469.0 8032.0 6270.0 0
MA0805.1_shift8 (TBX1)				; oligos_6nt_mkv2_m9 versus MA0805.1 (TBX1); m=17/30; ncol2=8; w=8; offset=2; strand=D; shift=8; score=0.567628; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 11931.0 1560.0 0.0 28.0 0.0 142.0 141.0 11931.0 c 0 0 0 0 0 0 0 0 113.0 711.0 0.0 214.0 5.0 613.0 720.0 33.0 g 0 0 0 0 0 0 0 0 1007.0 11931.0 11931.0 141.0 11931.0 109.0 11931.0 18.0 t 0 0 0 0 0 0 0 0 564.0 669.0 0.0 11931.0 0.0 11931.0 1039.0 0.0
MA0830.2_rc_shift3 (TCF4_rc)				; oligos_6nt_mkv2_m9 versus MA0830.2_rc (TCF4_rc); m=18/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.562427; ---ssggCAGGTGccg ; cor=; Ncor= a 0 0 0 6827.0 6430.0 6126.0 3555.0 242.0 27398.0 188.0 751.0 512.0 215.0 1737.0 7059.0 6225.0 c 0 0 0 7662.0 7964.0 4933.0 5281.0 28432.0 679.0 1197.0 1733.0 1295.0 321.0 18498.0 8618.0 7140.0 g 0 0 0 9843.0 8658.0 12872.0 18935.0 540.0 1016.0 27724.0 26765.0 635.0 28686.0 5062.0 6754.0 10052.0 t 0 0 0 5133.0 6413.0 5534.0 1694.0 251.0 372.0 356.0 216.0 27023.0 243.0 4168.0 7034.0 6048.0
MA1631.1_rc_shift3 (ASCL1(var.2)_rc)				; oligos_6nt_mkv2_m9 versus MA1631.1_rc (ASCL1(var.2)_rc); m=19/30; ncol2=13; w=10; offset=-3; strand=R; shift=3; score=0.559186; ---gsrGCAGGTGchg ; cor=; Ncor= a 0 0 0 8032.0 7779.0 9017.0 2394.0 249.0 32756.0 151.0 815.0 618.0 289.0 3290.0 8805.0 7347.0 c 0 0 0 8356.0 8939.0 2966.0 2719.0 33411.0 492.0 607.0 3209.0 860.0 321.0 18576.0 8601.0 8371.0 g 0 0 0 11996.0 10555.0 17883.0 28844.0 445.0 740.0 33402.0 30169.0 563.0 33562.0 6654.0 7998.0 11805.0 t 0 0 0 5972.0 7083.0 4490.0 399.0 251.0 368.0 196.0 163.0 32315.0 184.0 5836.0 8952.0 6833.0
MA1109.1_shift4 (NEUROD1)				; oligos_6nt_mkv2_m9 versus MA1109.1 (NEUROD1); m=20/30; ncol2=13; w=10; offset=-2; strand=D; shift=4; score=0.546984; ----graCAGATGGyr ; cor=; Ncor= a 0 0 0 0 561.0 755.0 1289.0 17.0 2241.0 16.0 2034.0 55.0 13.0 59.0 373.0 692.0 c 0 0 0 0 429.0 323.0 452.0 2240.0 7.0 24.0 150.0 51.0 7.0 93.0 911.0 540.0 g 0 0 0 0 726.0 906.0 494.0 13.0 16.0 2152.0 77.0 19.0 2231.0 1962.0 418.0 599.0 t 0 0 0 0 566.0 298.0 47.0 12.0 18.0 90.0 21.0 2157.0 31.0 168.0 580.0 451.0
MA0688.1_shift7 (TBX2)				; oligos_6nt_mkv2_m9 versus MA0688.1 (TBX2); m=21/30; ncol2=11; w=9; offset=1; strand=D; shift=7; score=0.545943; -------wAGGTGTgA ; cor=; Ncor= a 0 0 0 0 0 0 0 1258.0 3181.0 602.0 9.0 0.0 26.0 307.0 310.0 3181.0 c 0 0 0 0 0 0 0 402.0 59.0 519.0 36.0 329.0 0.0 392.0 1289.0 26.0 g 0 0 0 0 0 0 0 717.0 716.0 3181.0 3181.0 21.0 3181.0 27.0 3181.0 125.0 t 0 0 0 0 0 0 0 804.0 442.0 353.0 14.0 3181.0 12.0 3181.0 1409.0 120.0
MA1621.1_rc_shift3 (Rbpjl_rc)				; oligos_6nt_mkv2_m9 versus MA1621.1_rc (Rbpjl_rc); m=22/30; ncol2=14; w=10; offset=-3; strand=R; shift=3; score=0.540536; ---grsaCAGGTGtkb ; cor=; Ncor= a 0 0 0 2286.0 2537.0 2179.0 5784.0 124.0 9313.0 96.0 363.0 86.0 137.0 782.0 1364.0 2210.0 c 0 0 0 2281.0 1958.0 2687.0 1581.0 9295.0 132.0 317.0 672.0 110.0 103.0 1492.0 1802.0 2549.0 g 0 0 0 3003.0 2884.0 3247.0 1718.0 131.0 144.0 9005.0 8533.0 70.0 9273.0 1373.0 3117.0 2427.0 t 0 0 0 2082.0 2273.0 1539.0 569.0 102.0 63.0 234.0 84.0 9386.0 139.0 6005.0 3369.0 2466.0
MA0130.1_rc_shift10 (ZNF354C_rc)				; oligos_6nt_mkv2_m9 versus MA0130.1_rc (ZNF354C_rc); m=23/30; ncol2=6; w=6; offset=4; strand=R; shift=10; score=0.538134; ----------GTGGAk ; cor=; Ncor= a 0 0 0 0 0 0 0 0 0 0 0.0 0.0 0.0 0.0 11.0 0.0 c 0 0 0 0 0 0 0 0 0 0 1.0 0.0 0.0 0.0 0.0 3.0 g 0 0 0 0 0 0 0 0 0 0 15.0 0.0 16.0 16.0 2.0 6.0 t 0 0 0 0 0 0 0 0 0 0 0.0 16.0 0.0 0.0 3.0 7.0
MA0689.1_shift7 (TBX20)				; oligos_6nt_mkv2_m9 versus MA0689.1 (TBX20); m=24/30; ncol2=11; w=9; offset=1; strand=D; shift=7; score=0.525152; -------wAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 197.0 572.0 50.0 0.0 0.0 0.0 8.0 48.0 572.0 c 0 0 0 0 0 0 0 4.0 23.0 34.0 0.0 0.0 1.0 1.0 10.0 1.0 g 0 0 0 0 0 0 0 121.0 54.0 572.0 572.0 10.0 572.0 11.0 572.0 6.0 t 0 0 0 0 0 0 0 250.0 24.0 26.0 40.0 572.0 4.0 572.0 82.0 10.0
MA0743.2_shift0 (SCRT1)				; oligos_6nt_mkv2_m9 versus MA0743.2 (SCRT1); m=25/30; ncol2=16; w=10; offset=-6; strand=D; shift=0; score=0.503465; wawkCAACAGGTGgtw ; cor=; Ncor= a 16320.0 22932.0 17036.0 4413.0 1456.0 45606.0 57271.0 213.0 58758.0 7017.0 1664.0 883.0 7813.0 10722.0 13382.0 16484.0 c 14118.0 10314.0 8693.0 7425.0 54835.0 8751.0 370.0 59557.0 234.0 557.0 466.0 1098.0 3296.0 8788.0 14903.0 12837.0 g 14307.0 14514.0 10154.0 16396.0 1297.0 1835.0 1566.0 224.0 159.0 51330.0 56500.0 259.0 41190.0 26973.0 13470.0 11049.0 t 15464.0 12449.0 24326.0 31975.0 2621.0 4017.0 1002.0 215.0 1058.0 1305.0 1579.0 57969.0 7910.0 13726.0 18454.0 19839.0
MA0744.2_shift0 (SCRT2)				; oligos_6nt_mkv2_m9 versus MA0744.2 (SCRT2); m=26/30; ncol2=16; w=10; offset=-6; strand=D; shift=0; score=0.487417; rrwkCAACAGGTggtw ; cor=; Ncor= a 18855.0 23310.0 29945.0 5353.0 1378.0 53425.0 62366.0 231.0 63880.0 7306.0 1862.0 2078.0 10481.0 13383.0 16058.0 17881.0 c 13345.0 12732.0 6319.0 7236.0 59161.0 5536.0 413.0 64856.0 294.0 728.0 972.0 3475.0 5661.0 11351.0 16085.0 13846.0 g 17680.0 17497.0 12473.0 35769.0 1339.0 2265.0 1878.0 319.0 252.0 56105.0 60636.0 1168.0 38133.0 25288.0 14716.0 12430.0 t 15730.0 12071.0 16873.0 17252.0 3732.0 4384.0 953.0 204.0 1184.0 1471.0 2140.0 58889.0 11335.0 15588.0 18751.0 21453.0
MA0802.1_shift8 (TBR1)				; oligos_6nt_mkv2_m9 versus MA0802.1 (TBR1); m=27/30; ncol2=10; w=8; offset=2; strand=D; shift=8; score=0.480258; --------AGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 34509.0 6880.0 70.0 39.0 0.0 2386.0 1175.0 34509.0 c 0 0 0 0 0 0 0 0 359.0 3255.0 254.0 1759.0 6.0 4742.0 2551.0 90.0 g 0 0 0 0 0 0 0 0 3329.0 34509.0 34509.0 88.0 34509.0 157.0 34509.0 584.0 t 0 0 0 0 0 0 0 0 1433.0 4480.0 213.0 34509.0 4.0 34509.0 7001.0 205.0
MA1601.1_shift8 (ZNF75D)				; oligos_6nt_mkv2_m9 versus MA1601.1 (ZNF75D); m=28/30; ncol2=10; w=8; offset=2; strand=D; shift=8; score=0.472846; --------rtGTGGGA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 2111.0 1057.0 2.0 10.0 26.0 46.0 24.0 6706.0 c 0 0 0 0 0 0 0 0 1573.0 715.0 0.0 59.0 18.0 44.0 29.0 20.0 g 0 0 0 0 0 0 0 0 1850.0 1468.0 6757.0 4.0 6710.0 6545.0 6678.0 15.0 t 0 0 0 0 0 0 0 0 1225.0 3519.0 0.0 6686.0 5.0 124.0 28.0 18.0
MA0800.1_shift7 (EOMES)				; oligos_6nt_mkv2_m9 versus MA0800.1 (EOMES); m=29/30; ncol2=13; w=9; offset=1; strand=D; shift=7; score=0.453135; -------aAGGTGTGA ; cor=; Ncor= a 0 0 0 0 0 0 0 4526.0 9832.0 1775.0 23.0 19.0 9.0 495.0 210.0 9832.0 c 0 0 0 0 0 0 0 911.0 158.0 1004.0 92.0 600.0 8.0 1540.0 550.0 28.0 g 0 0 0 0 0 0 0 2274.0 1259.0 9832.0 9832.0 50.0 9832.0 98.0 9832.0 99.0 t 0 0 0 0 0 0 0 2122.0 653.0 1305.0 94.0 9832.0 3.0 9832.0 980.0 24.0
MA0513.1_rc_shift8 (SMAD2::SMAD3::SMAD4_rc)				; oligos_6nt_mkv2_m9 versus MA0513.1_rc (SMAD2::SMAD3::SMAD4_rc); m=30/30; ncol2=13; w=8; offset=2; strand=R; shift=8; score=0.40676; --------agGTGmsA ; cor=; Ncor= a 0 0 0 0 0 0 0 0 540.0 152.0 0.0 97.0 0.0 283.0 23.0 899.0 c 0 0 0 0 0 0 0 0 35.0 47.0 133.0 18.0 3.0 280.0 539.0 0.0 g 0 0 0 0 0 0 0 0 214.0 583.0 736.0 19.0 896.0 125.0 231.0 0.0 t 0 0 0 0 0 0 0 0 110.0 117.0 30.0 765.0 0.0 211.0 106.0 0.0