$prediction
                 CTL          PHO pred.class grouping
YAL038W 7.948007e-01 2.051993e-01        CTL      CTL
YAR071W 3.872124e-04 9.996128e-01        PHO      PHO
YBL005W 9.999995e-01 5.080312e-07        CTL      CTL
YBL030C 9.999997e-01 3.243720e-07        CTL      CTL
YBR006W 9.999874e-01 1.261548e-05        CTL      CTL
YBR018C 9.999988e-01 1.154997e-06        CTL      CTL
YBR020W 9.999998e-01 2.205216e-07        CTL      CTL
YBR093C 2.953229e-03 9.970468e-01        PHO      PHO
YBR115C 1.000000e+00 7.559876e-09        CTL      CTL
YBR184W 9.999974e-01 2.564187e-06        CTL      CTL
YBR213W 9.999946e-01 5.422711e-06        CTL      CTL
YBR296C 3.321868e-03 9.966781e-01        PHO      PHO
YCL018W 9.999997e-01 3.169310e-07        CTL      CTL
YDL131W 9.999878e-01 1.223714e-05        CTL      CTL
YDL182W 9.997666e-01 2.334373e-04        CTL      CTL
YDL205C 9.999998e-01 1.862790e-07        CTL      CTL
YDL210W 9.999986e-01 1.352585e-06        CTL      CTL
YDR011W 9.999996e-01 4.202702e-07        CTL      CTL
YDR044W 1.000000e+00 1.943223e-08        CTL      CTL
YDR234W 9.999929e-01 7.142096e-06        CTL      CTL
YDR285W 1.000000e+00 2.775668e-08        CTL      CTL
YDR406W 9.999975e-01 2.469197e-06        CTL      CTL
YDR481C 9.925732e-01 7.426822e-03        CTL      PHO
YDR502C 9.999682e-01 3.184234e-05        CTL      CTL
YEL021W 9.999998e-01 1.832301e-07        CTL      CTL
YEL039C 9.999997e-01 3.173974e-07        CTL      CTL
YER026C 9.999916e-01 8.367396e-06        CTL      CTL
YER086W 1.000000e+00 2.687398e-10        CTL      CTL
YER091C 9.972460e-01 2.753966e-03        CTL      CTL
YER179W 9.999997e-01 2.712721e-07        CTL      CTL
YFR030W 9.992565e-01 7.435422e-04        CTL      CTL
YGL009C 9.999999e-01 6.265452e-08        CTL      CTL
YGL073W 7.509731e-01 2.490269e-01        CTL      CTL
YGL213C 9.421741e-01 5.782594e-02        CTL      CTL
YGR019W 9.960846e-01 3.915439e-03        CTL      CTL
YGR044C 9.999925e-01 7.515801e-06        CTL      CTL
YGR088W 9.996438e-01 3.561825e-04        CTL      CTL
YGR121C 9.999988e-01 1.177611e-06        CTL      CTL
YGR157W 9.999961e-01 3.900769e-06        CTL      CTL
YGR233C 1.510627e-01 8.489373e-01        PHO      PHO
YGR281W 9.994705e-01 5.295158e-04        CTL      CTL
YHL022C 1.000000e+00 2.001594e-08        CTL      CTL
YHL036W 9.956954e-01 4.304628e-03        CTL      CTL
YHR007C 9.999455e-01 5.445970e-05        CTL      CTL
YHR008C 9.999962e-01 3.775084e-06        CTL      CTL
YHR014W 9.999878e-01 1.222363e-05        CTL      CTL
YHR037W 9.988837e-01 1.116276e-03        CTL      CTL
YHR136C 1.411370e-01 8.588630e-01        PHO      PHO
YHR153C 9.999286e-01 7.135339e-05        CTL      CTL
YIL015W 9.999993e-01 7.358726e-07        CTL      CTL
YIL046W 5.865170e-01 4.134830e-01        CTL      CTL
YIL072W 9.999995e-01 5.360398e-07        CTL      CTL
YIR017C 9.998953e-01 1.046811e-04        CTL      CTL
YIR034C 8.846555e-01 1.153445e-01        CTL      CTL
YJL106W 9.999247e-01 7.533898e-05        CTL      CTL
YJL117W 4.147186e-01 5.852814e-01        PHO      PHO
YJL153C 9.999984e-01 1.643807e-06        CTL      CTL
YJL219W 9.998265e-01 1.735278e-04        CTL      CTL
YJR010W 9.998576e-01 1.424486e-04        CTL      CTL
YJR048W 9.999965e-01 3.516438e-06        CTL      CTL
YJR073C 9.726965e-01 2.730349e-02        CTL      CTL
YJR094C 9.999185e-01 8.150671e-05        CTL      CTL
YJR137C 9.945644e-01 5.435629e-03        CTL      CTL
YJR152W 9.999053e-01 9.473344e-05        CTL      CTL
YKL001C 9.981661e-01 1.833864e-03        CTL      CTL
YKL182W 9.999998e-01 2.082931e-07        CTL      CTL
YKL216W 9.999997e-01 3.467069e-07        CTL      CTL
YKR039W 9.999999e-01 6.741001e-08        CTL      CTL
YKR069W 9.150617e-01 8.493835e-02        CTL      CTL
YLR081W 9.999753e-01 2.468065e-05        CTL      CTL
YLR142W 9.999825e-01 1.754609e-05        CTL      CTL
YLR180W 9.980271e-01 1.972866e-03        CTL      CTL
YLR263W 1.000000e+00 3.820789e-08        CTL      CTL
YLR303W 9.972158e-01 2.784206e-03        CTL      CTL
YLR329W 9.999810e-01 1.897008e-05        CTL      CTL
YLR420W 9.999849e-01 1.509344e-05        CTL      CTL
YLR438W 9.996016e-01 3.984496e-04        CTL      CTL
YML051W 9.999993e-01 6.781431e-07        CTL      CTL
YML054C 9.995962e-01 4.038076e-04        CTL      CTL
YML075C 9.999995e-01 4.835069e-07        CTL      CTL
YML123C 5.131378e-07 9.999995e-01        PHO      PHO
YMR108W 9.999605e-01 3.945249e-05        CTL      CTL
YMR133W 1.000000e+00 6.662872e-09        CTL      CTL
YNL052W 9.999674e-01 3.255276e-05        CTL      CTL
YNL104C 9.368221e-01 6.317794e-02        CTL      CTL
YNL142W 9.999997e-01 3.427600e-07        CTL      CTL
YNL210W 1.000000e+00 4.174232e-08        CTL      CTL
YNL241C 9.999876e-01 1.241972e-05        CTL      CTL
YNL277W 9.980148e-01 1.985171e-03        CTL      CTL
YNR001C 9.999999e-01 1.151771e-07        CTL      CTL
YNR050C 9.997738e-01 2.261554e-04        CTL      CTL
YOL006C 9.998246e-01 1.753821e-04        CTL      CTL
YOR065W 9.980352e-01 1.964761e-03        CTL      CTL
YOR120W 9.999997e-01 3.488206e-07        CTL      CTL
YOR153W 9.999018e-01 9.822204e-05        CTL      CTL
YOR328W 9.999773e-01 2.272938e-05        CTL      CTL
YOR351C 9.999999e-01 5.613680e-08        CTL      CTL
YOR375C 9.999720e-01 2.797609e-05        CTL      CTL
YPL111W 9.999994e-01 5.754038e-07        CTL      CTL
YPL231W 9.920350e-01 7.965036e-03        CTL      CTL
YPR065W 9.999957e-01 4.300750e-06        CTL      CTL
YPR138C 9.999998e-01 1.602277e-07        CTL      CTL
YPR145W 9.992559e-01 7.440651e-04        CTL      CTL
YPR167C 9.994169e-01 5.831041e-04        CTL      CTL

$confusion
      true
object CTL PHO
   CTL  96   1
   PHO   0   7
attr(,"error")
[1] 0.009615385

