MATRIX QUALITY SUPPLEMENTARY STUDY CASES

Transcription Factors in Mus_musculus

Factor Matrix ID Matrix Source Score distribution comparison Score distribution comparison logy ROC curve LOGO LOGO RC Full content
Ctcf Ctcf_bailey_2010 Bailey et al, 2010 hmtl_index
Ctcf MA0147.1 JASPAR (built from Chen's peaks) hmtl_index
Ctcf V$CTCF_02 TRANSFAC hmtl_index
E2f1 E2f1_bailey_2010 Bailey et al, 2010 hmtl_index
E2f1 NA TRANSFAC hmtl_index
Esrrb Esrrb_bailey_2010 Bailey et al, 2010 hmtl_index
Esrrb MA0141.1 JASPAR (built from Chen's peaks) hmtl_index
Klf4 Klf4_bailey_2010 Bailey et al, 2010 hmtl_index
Klf4 MA0039.2 JASPAR (built from Chen's peaks) hmtl_index
Klf4 V$GKLF_02 TRANSFAC hmtl_index
Nanog Nanog_bailey_2010 Bailey et al, 2010 hmtl_index
Nanog V$NANOG_02 TRANSFAC hmtl_index
Oct4 V$OCT_Q6 TRANSFAC hmtl_index
Oct4Sox2 V$OCT4_01 TRANSFAC hmtl_index
Smad1 Smad1_bailey_2010 Bailey et al, 2010 hmtl_index
Smad1 V$SMAD_Q6 TRANSFAC hmtl_index
Sox2 Sox2_bailey_2010 Bailey et al, 2010 hmtl_index
Sox2 MA0143.1 JASPAR (built from Chen's peaks) hmtl_index
Sox2 V$SOX2_Q6 TRANSFAC hmtl_index
Stat3 Stat3_bailey_2010 Bailey et al, 2010 hmtl_index
Stat3 MA0144.1 JASPAR (built from Chen's peaks) hmtl_index
Stat3 V$STAT3STAT3_Q3 TRANSFAC hmtl_index
Tcfcp2l1 Tcfcp2l1_bailey_2010 Bailey et al, 2010 hmtl_index
Tcfcp2l1 MA0145.1 JASPAR (built from Chen's peaks) hmtl_index
Zfx Zfx_bailey_2010 Bailey et al, 2010 hmtl_index
Zfx MA0146.1 JASPAR (built from Chen's peaks) hmtl_index
Zfx V$ZFX_01 TRANSFAC hmtl_index
c-Myc c-Myc_bailey_2010 Bailey et al, 2010 hmtl_index
c-Myc MA0147.1 JASPAR (built from Chen's peaks) hmtl_index
c-Myc V$MYC_Q2 TRANSFAC hmtl_index
n-Myc n-Myc_bailey_2010 Bailey et al, 2010 hmtl_index
n-Myc NA JASPAR (built from Chen's peaks) hmtl_index
n-Myc V$NMYC_01 TRANSFAC hmtl_index