################################################################
# Quick test for measuring distances between promoters on the basis of
# oligo freq

include ${RSAT}/makefiles/util.mk

## Count oligos
PREFIX=yeast_PHO_up_800_twice
SEQ=data/${PREFIX}.fasta
OL=3
STR=-1str
COUNTS=data/${PREFIX}_l${OL}${STR}.tab
all_oligos:
	oligo-analysis -i ${SEQ} -o ${COUNTS} ${STR} -table -l ${OL}
