This manual page is provisionary. It is a simple copy / paste of the manual of the command line tool.
NAME
draw-heatmap
VERSION
$program_version
DESCRIPTION
Draw a heatmap from a table
AUTHORS
Sylvain Brohee
With the help of Morgane Thomas-Chollier for
Chaos representation
CATEGORY
util
USAGE
draw-heatmap [-i inputfile] -o outputfile [-v #] [-chaos] [...]
-out_format [png|jpeg]
INPUT FORMAT
A tab delimited table.
It may contain a header (starting with a '#' symbol). The cells nlt
containing real values will not be taken into account.
OUTPUT FORMAT
A heatmap in the specified format.
OPTIONS
-v #
Level of verbosity (detail in the warning messages during execution)
-h
Display full help message
-help
Same as -h
-i inputfile
Input file name. This option is mandatory.
-o outputfile
Name of the output file. This option is mandatory.
-html html_map_file
If a HTML map file is defined, draw-heatmap then produces a HTML
file that loads the HEATMAP. Moreover, each of the cell is defined
so that when the mouse is over in a web browser, the user get the
name of row, of the column and the value of the cell. For CHAOS game
representation, the word corresponding to the cell and its
associated value are given.
-rownames
Use this option if the first column contain the row names.
-no_text
Using this option, the values are not written in the cells of the
heatmap.
-out_format output_format
Output format. Supported: png,jpeg
-gradient
Color of the intensity gradient of the heatmap. Default is grey.
Supported : green, blue, red, fire, grey.
-col_width #
Width of the columns (in pixel).
If the row height is to small, the label of the heatmap will not be
indicated. (Default : 50 px)
-row_height #
Height of the rows (in pixel).
If the row height is to small, the label of the heatmap will not be
indicated. (Default : 30 px)
-min #
Minimal value of the heatmap. By default, this value is the minimal
value of the input file. If the specified value is larger than the
minimal value of the heatmap, then the minimal value of the heatmap
will be used as minimal value.
-max #
Maximal value of the heatmap. By default, this value is the maximal
value of the input file. If the specified value is smaller than the
maximal value of the heatmap, then the maximal value of the heatmap
will be used as maximal value.
-lines
Add black vertical and horizontal separations lines between the
cells of the heatmap