One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/results/discovered_motifs/oligos_6nt_mkv3_m4/peak-motifs_oligos_6nt_mkv3_m4.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/results/discovered_motifs/oligos_6nt_mkv3_m4/peak-motifs_oligos_6nt_mkv3_m4_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_6nt_mkv3_m4_shift4 ; 35 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_6nt_mkv3_m4_shift4 (oligos_6nt_mkv3_m4)
; oligos_6nt_mkv3_m4; m=0 (reference); ncol1=11; shift=4; ncol=15; ----atTTACATAws ; Alignment reference a 0 0 0 0 460 228 61 32 921 63 1109 80 1031 380 286 c 0 0 0 0 212 227 61 41 41 1038 34 77 47 227 324 g 0 0 0 0 267 182 29 23 187 29 15 56 43 199 301 t 0 0 0 0 257 559 1045 1100 47 66 38 983 75 390 285

MA0785.1_rc_shift3 (POU2F1_rc)
; oligos_6nt_mkv3_m4 versus MA0785.1_rc (POU2F1_rc); m=1/34; ncol2=12; w=11; offset=-1; strand=R; shift=3; score=0.755464; ---aATTwgCATAwt ; cor=; Ncor= a 0 0 0 4262.0 10582.0 158.0 787.0 3651.0 3375.0 1326.0 10582.0 43.0 10582.0 5231.0 2075.0 c 0 0 0 2504.0 755.0 51.0 879.0 46.0 1351.0 10582.0 213.0 29.0 474.0 2142.0 1494.0 g 0 0 0 1840.0 457.0 37.0 108.0 33.0 10582.0 82.0 501.0 12.0 1347.0 1046.0 1938.0 t 0 0 0 1976.0 1422.0 10582.0 10582.0 6932.0 300.0 186.0 153.0 10582.0 756.0 5351.0 5076.0

MA0025.2_rc_shift3 (NFIL3_rc)
; oligos_6nt_mkv3_m4 versus MA0025.2_rc (NFIL3_rc); m=2/34; ncol2=13; w=11; offset=-1; strand=R; shift=3; score=0.730332; ---wtaTTrCATAAy ; cor=; Ncor= a 0 0 0 6893.0 5543.0 13143.0 474.0 434.0 9180.0 610.0 20334.0 433.0 20606.0 20927.0 2798.0 c 0 0 0 4482.0 4152.0 2701.0 360.0 171.0 454.0 20459.0 492.0 990.0 1714.0 518.0 7261.0 g 0 0 0 4929.0 5630.0 4959.0 251.0 543.0 12004.0 467.0 1511.0 220.0 208.0 681.0 3896.0 t 0 0 0 6692.0 7671.0 2193.0 21911.0 21848.0 1358.0 1460.0 659.0 21353.0 468.0 870.0 9041.0

MA0843.1_shift4 (TEF)
; oligos_6nt_mkv3_m4 versus MA0843.1 (TEF); m=3/34; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.715671; ----yrTTACrTAAy ; cor=; Ncor= a 0 0 0 0 541.0 1971.0 90.0 107.0 3601.0 17.0 1324.0 0.0 3601.0 3601.0 0.0 c 0 0 0 0 1053.0 372.0 18.0 0.0 0.0 3601.0 0.0 133.0 76.0 0.0 2120.0 g 0 0 0 0 853.0 1630.0 5.0 31.0 108.0 0.0 2277.0 43.0 11.0 19.0 269.0 t 0 0 0 0 1154.0 8.0 3601.0 3601.0 0.0 446.0 0.0 3601.0 161.0 10.0 1481.0

MA0639.1_shift4 (DBP)
; oligos_6nt_mkv3_m4 versus MA0639.1 (DBP); m=4/34; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.697828; ----krTTAYRTAAy ; cor=; Ncor= a 0 0 0 0 1552.0 3706.0 5.0 4.0 7100.0 2.0 3180.0 3.0 7100.0 7100.0 158.0 c 0 0 0 0 1714.0 1130.0 4.0 6.0 0.0 7100.0 17.0 541.0 288.0 1.0 3707.0 g 0 0 0 0 1903.0 3393.0 2.0 602.0 498.0 21.0 7100.0 7.0 7.0 2.0 1543.0 t 0 0 0 0 1930.0 93.0 7100.0 7100.0 4.0 2664.0 1.0 7100.0 6.0 2.0 3393.0

MA0627.2_rc_shift2 (POU2F3_rc)
; oligos_6nt_mkv3_m4 versus MA0627.2_rc (POU2F3_rc); m=5/34; ncol2=13; w=11; offset=-2; strand=R; shift=2; score= 0.6907; --wwATTTGCATatw ; cor=; Ncor= a 0 0 17245.0 15909.0 43338.0 330.0 3276.0 896.0 3716.0 2827.0 53366.0 931.0 37593.0 13775.0 16525.0 c 0 0 7941.0 13237.0 4098.0 233.0 804.0 138.0 1079.0 51971.0 1251.0 354.0 3029.0 8770.0 10722.0 g 0 0 11936.0 10595.0 3478.0 164.0 567.0 80.0 50288.0 251.0 322.0 194.0 6885.0 6824.0 11383.0 t 0 0 18907.0 16288.0 5115.0 55302.0 51382.0 54915.0 946.0 980.0 1090.0 54550.0 8522.0 26660.0 17399.0

MA0792.1_rc_shift4 (POU5F1B_rc)
; oligos_6nt_mkv3_m4 versus MA0792.1_rc (POU5F1B_rc); m=6/34; ncol2=9; w=9; offset=0; strand=R; shift=4; score=0.683103; ----ATTwrCATA-- ; cor=; Ncor= a 0 0 0 0 9519.0 203.0 896.0 3220.0 3828.0 1790.0 9519.0 84.0 9519.0 0 0 c 0 0 0 0 750.0 97.0 856.0 65.0 1293.0 9519.0 206.0 67.0 808.0 0 0 g 0 0 0 0 537.0 65.0 144.0 51.0 9519.0 94.0 364.0 21.0 1778.0 0 0 t 0 0 0 0 1559.0 9519.0 9519.0 6299.0 398.0 322.0 171.0 9519.0 1326.0 0 0

MA1115.1_rc_shift3 (POU5F1_rc)
; oligos_6nt_mkv3_m4 versus MA1115.1_rc (POU5F1_rc); m=7/34; ncol2=11; w=10; offset=-1; strand=R; shift=3; score=0.672704; ---haTTTGCATww- ; cor=; Ncor= a 0 0 0 3637.0 6383.0 307.0 838.0 1108.0 1723.0 634.0 12834.0 70.0 4818.0 4846.0 0 c 0 0 0 3551.0 2071.0 257.0 1026.0 118.0 548.0 11571.0 67.0 229.0 1908.0 1996.0 0 g 0 0 0 2450.0 2104.0 270.0 690.0 132.0 10310.0 192.0 130.0 122.0 2785.0 1290.0 0 t 0 0 0 3476.0 2556.0 12280.0 10560.0 11756.0 533.0 717.0 83.0 12693.0 3603.0 4982.0 0

MA0789.1_rc_shift4 (POU3F4_rc)
; oligos_6nt_mkv3_m4 versus MA0789.1_rc (POU3F4_rc); m=8/34; ncol2=9; w=9; offset=0; strand=R; shift=4; score=0.663355; ----ATTwGCATA-- ; cor=; Ncor= a 0 0 0 0 11117.0 168.0 885.0 4670.0 2565.0 245.0 11117.0 26.0 11117.0 0 0 c 0 0 0 0 292.0 88.0 315.0 56.0 602.0 11117.0 24.0 68.0 136.0 0 0 g 0 0 0 0 247.0 47.0 332.0 10.0 11117.0 19.0 59.0 23.0 349.0 0 0 t 0 0 0 0 705.0 11117.0 11117.0 6447.0 136.0 53.0 59.0 11117.0 941.0 0 0

MA1607.1_rc_shift1 (Foxl2_rc)
; oligos_6nt_mkv3_m4 versus MA1607.1_rc (Foxl2_rc); m=9/34; ncol2=14; w=11; offset=-3; strand=R; shift=1; score=0.653163; -ywTGTTTACAtwwy ; cor=; Ncor= a 0 4100.0 4782.0 1270.0 1970.0 328.0 366.0 204.0 16284.0 479.0 12849.0 2785.0 8493.0 5755.0 4214.0 c 0 4529.0 3844.0 401.0 151.0 411.0 187.0 112.0 419.0 14648.0 1371.0 2107.0 1599.0 3521.0 4621.0 g 0 4329.0 4246.0 807.0 15698.0 216.0 336.0 558.0 301.0 367.0 896.0 2051.0 1576.0 2912.0 3031.0 t 0 5143.0 5229.0 15623.0 282.0 17146.0 17212.0 17227.0 1097.0 2607.0 2985.0 11158.0 6433.0 5913.0 6235.0

MA0788.1_rc_shift2 (POU3F3_rc)
; oligos_6nt_mkv3_m4 versus MA0788.1_rc (POU3F3_rc); m=10/34; ncol2=13; w=11; offset=-2; strand=R; shift=2; score=0.652146; --waATTwGCATAww ; cor=; Ncor= a 0 0 542.0 1078.0 1078.0 14.0 79.0 572.0 343.0 86.0 1078.0 30.0 1078.0 637.0 290.0 c 0 0 115.0 237.0 12.0 15.0 77.0 1.0 118.0 1078.0 49.0 12.0 64.0 131.0 137.0 g 0 0 85.0 141.0 20.0 6.0 11.0 4.0 1078.0 10.0 33.0 11.0 57.0 41.0 75.0 t 0 0 536.0 240.0 53.0 1078.0 1078.0 506.0 28.0 22.0 25.0 1078.0 129.0 440.0 576.0

MA0847.2_rc_shift2 (FOXD2_rc)
; oligos_6nt_mkv3_m4 versus MA0847.2_rc (FOXD2_rc); m=11/34; ncol2=13; w=11; offset=-2; strand=R; shift=2; score=0.649893; --wTRTTTAYwTwrs ; cor=; Ncor= a 0 0 2076.0 209.0 2297.0 33.0 11.0 11.0 5995.0 6.0 1553.0 23.0 3812.0 3589.0 442.0 c 0 0 515.0 125.0 0.0 25.0 17.0 11.0 0.0 5995.0 752.0 1294.0 3.0 309.0 2314.0 g 0 0 1003.0 53.0 5995.0 0.0 209.0 658.0 1005.0 101.0 1208.0 92.0 36.0 2406.0 1834.0 t 0 0 2400.0 5995.0 0.0 5995.0 5995.0 5995.0 148.0 2608.0 2482.0 5995.0 2183.0 865.0 1404.0

MA0043.3_rc_shift3 (HLF_rc)
; oligos_6nt_mkv3_m4 versus MA0043.3_rc (HLF_rc); m=12/34; ncol2=14; w=11; offset=-1; strand=R; shift=3; score=0.648231; ---wkrTTRCATAAy ; cor=; Ncor= a 0 0 0 6732.0 5897.0 6488.0 113.0 98.0 6653.0 189.0 22426.0 209.0 23271.0 23739.0 1410.0 c 0 0 0 5523.0 3218.0 3300.0 189.0 48.0 199.0 21705.0 253.0 1344.0 895.0 148.0 9793.0 g 0 0 0 5267.0 6412.0 13237.0 67.0 122.0 17203.0 112.0 1548.0 125.0 96.0 242.0 4432.0 t 0 0 0 6902.0 8897.0 1399.0 24055.0 24156.0 369.0 2418.0 197.0 22746.0 162.0 295.0 8789.0

MA0786.1_rc_shift2 (POU3F1_rc)
; oligos_6nt_mkv3_m4 versus MA0786.1_rc (POU3F1_rc); m=13/34; ncol2=12; w=10; offset=-2; strand=R; shift=2; score=0.635189; --wmATTwrCATAw- ; cor=; Ncor= a 0 0 961.0 1167.0 2471.0 63.0 284.0 1048.0 1119.0 232.0 2471.0 21.0 2471.0 1437.0 0 c 0 0 452.0 620.0 128.0 25.0 130.0 21.0 413.0 2471.0 21.0 26.0 128.0 322.0 0 g 0 0 478.0 302.0 95.0 20.0 103.0 1.0 2471.0 13.0 53.0 7.0 186.0 126.0 0 t 0 0 1510.0 382.0 259.0 2471.0 2471.0 1423.0 170.0 37.0 44.0 2471.0 505.0 1034.0 0

MA0784.1_rc_shift1 (POU1F1_rc)
; oligos_6nt_mkv3_m4 versus MA0784.1_rc (POU1F1_rc); m=14/34; ncol2=14; w=11; offset=-3; strand=R; shift=1; score=0.62186; -cTmATTwGCATAwt ; cor=; Ncor= a 0 547.0 273.0 1287.0 2128.0 3.0 85.0 861.0 536.0 176.0 2128.0 19.0 2128.0 1000.0 397.0 c 0 2128.0 194.0 840.0 40.0 0.0 82.0 7.0 164.0 2128.0 26.0 32.0 108.0 187.0 273.0 g 0 479.0 174.0 241.0 37.0 10.0 11.0 12.0 2128.0 11.0 74.0 14.0 83.0 123.0 247.0 t 0 736.0 2128.0 222.0 76.0 2128.0 2128.0 1267.0 98.0 28.0 45.0 2128.0 276.0 1128.0 1211.0

MA0787.1_rc_shift2 (POU3F2_rc)
; oligos_6nt_mkv3_m4 versus MA0787.1_rc (POU3F2_rc); m=15/34; ncol2=12; w=10; offset=-2; strand=R; shift=2; score=0.617632; --tmATTwGCATAw- ; cor=; Ncor= a 0 0 562.0 840.0 1292.0 13.0 45.0 604.0 372.0 60.0 1292.0 0.0 1292.0 700.0 0 c 0 0 261.0 452.0 28.0 0.0 32.0 1.0 153.0 1292.0 12.0 25.0 40.0 171.0 0 g 0 0 262.0 165.0 19.0 6.0 16.0 4.0 1292.0 9.0 30.0 16.0 65.0 61.0 0 t 0 0 1292.0 137.0 63.0 1292.0 1292.0 688.0 68.0 19.0 28.0 1292.0 163.0 591.0 0

MA0845.1_rc_shift2 (FOXB1_rc)
; oligos_6nt_mkv3_m4 versus MA0845.1_rc (FOXB1_rc); m=16/34; ncol2=11; w=9; offset=-2; strand=R; shift=2; score=0.603075; --aTrTTKACwTw-- ; cor=; Ncor= a 0 0 4008.0 147.0 4589.0 216.0 381.0 73.0 6841.0 124.0 4858.0 561.0 4448.0 0 0 c 0 0 556.0 157.0 104.0 47.0 0.0 75.0 113.0 6841.0 409.0 1498.0 190.0 0 0 g 0 0 573.0 0.0 2252.0 47.0 213.0 1950.0 240.0 54.0 218.0 263.0 272.0 0 0 t 0 0 1704.0 6841.0 28.0 6841.0 6841.0 4891.0 180.0 1159.0 1983.0 5343.0 2393.0 0 0

MA0032.2_rc_shift2 (FOXC1_rc)
; oligos_6nt_mkv3_m4 versus MA0032.2_rc (FOXC1_rc); m=17/34; ncol2=11; w=9; offset=-2; strand=R; shift=2; score=0.572848; --wTrTTKAYwTw-- ; cor=; Ncor= a 0 0 11787.0 184.0 9708.0 112.0 57.0 45.0 18489.0 51.0 10596.0 1386.0 12038.0 0 0 c 0 0 1107.0 433.0 165.0 141.0 0.0 21.0 390.0 13631.0 2422.0 4165.0 304.0 0 0 g 0 0 1558.0 27.0 8782.0 56.0 108.0 5372.0 1652.0 336.0 2008.0 728.0 772.0 0 0 t 0 0 6702.0 18489.0 122.0 18489.0 18489.0 13117.0 2496.0 4858.0 7893.0 14324.0 6452.0 0 0

MA0507.1_shift1 (POU2F2)
; oligos_6nt_mkv3_m4 versus MA0507.1 (POU2F2); m=18/34; ncol2=13; w=10; offset=-3; strand=D; shift=1; score=0.56635; -ykmATTTGCATrw- ; cor=; Ncor= a 0 415.0 530.0 605.0 2016.0 0.0 256.0 0.0 158.0 0.0 2257.0 0.0 1159.0 594.0 0 c 0 635.0 266.0 825.0 19.0 0.0 2.0 0.0 0.0 2271.0 30.0 2.0 39.0 361.0 0 g 0 402.0 593.0 415.0 1.0 0.0 0.0 0.0 1997.0 0.0 0.0 0.0 613.0 107.0 0 t 0 835.0 898.0 442.0 251.0 2287.0 2029.0 2287.0 132.0 16.0 0.0 2285.0 476.0 1225.0 0

MA0142.1_rc_shift4 (Pou5f1::Sox2_rc)
; oligos_6nt_mkv3_m4 versus MA0142.1_rc (Pou5f1::Sox2_rc); m=19/34; ncol2=15; w=11; offset=0; strand=R; shift=4; score=0.563336; ----aTtTGCATrws ; cor=; Ncor= a 0 0 0 0 837.0 53.0 92.0 269.0 196.0 104.0 1332.0 80.0 612.0 907.0 63.0 c 0 0 0 0 207.0 75.0 315.0 30.0 129.0 1239.0 15.0 24.0 186.0 29.0 825.0 g 0 0 0 0 119.0 33.0 68.0 16.0 1029.0 16.0 5.0 30.0 365.0 18.0 363.0 t 0 0 0 0 198.0 1200.0 887.0 1050.0 14.0 10.0 17.0 1235.0 206.0 415.0 118.0

MA0846.1_rc_shift1 (FOXC2_rc)
; oligos_6nt_mkv3_m4 versus MA0846.1_rc (FOXC2_rc); m=20/34; ncol2=12; w=9; offset=-3; strand=R; shift=1; score=0.491498; -wwTRTTTAywTw-- ; cor=; Ncor= a 0 9461.0 7160.0 215.0 6021.0 242.0 107.0 122.0 20456.0 136.0 9155.0 2080.0 11517.0 0 0 c 0 2649.0 1710.0 328.0 68.0 279.0 81.0 87.0 321.0 14038.0 3129.0 5093.0 454.0 0 0 g 0 3080.0 2087.0 101.0 14435.0 105.0 344.0 6759.0 3773.0 440.0 3476.0 1652.0 1279.0 0 0 t 0 10995.0 13296.0 20456.0 31.0 20456.0 20456.0 20456.0 2005.0 6418.0 11301.0 20456.0 8939.0 0 0

MA0607.1_rc_shift8 (Bhlha15_rc)
; oligos_6nt_mkv3_m4 versus MA0607.1_rc (Bhlha15_rc); m=21/34; ncol2=8; w=7; offset=4; strand=R; shift=8; score=0.462462; --------aCATATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 614.0 0.0 999.0 0.0 799.0 0.0 0.0 c 0 0 0 0 0 0 0 0 154.0 999.0 0.0 0.0 200.0 0.0 0.0 g 0 0 0 0 0 0 0 0 231.0 0.0 0.0 200.0 0.0 0.0 999.0 t 0 0 0 0 0 0 0 0 1.0 0.0 0.0 799.0 0.0 999.0 0.0

MA0047.3_rc_shift1 (FOXA2_rc)
; oligos_6nt_mkv3_m4 versus MA0047.3_rc (FOXA2_rc); m=22/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.459346; -wwTGTTTACwt--- ; cor=; Ncor= a 0 66478.0 84100.0 9418.0 59170.0 7805.0 10179.0 6283.0 254489.0 4144.0 117443.0 52026.0 0 0 0 c 0 56632.0 50527.0 2984.0 3603.0 2805.0 6484.0 2641.0 1890.0 236311.0 38538.0 63806.0 0 0 0 g 0 53633.0 50576.0 3086.0 196969.0 3329.0 22429.0 9424.0 2037.0 2928.0 12432.0 34080.0 0 0 0 t 0 85410.0 76950.0 246665.0 2411.0 248214.0 223061.0 243805.0 3737.0 18770.0 93740.0 112241.0 0 0 0

MA1683.1_rc_shift1 (FOXA3_rc)
; oligos_6nt_mkv3_m4 versus MA1683.1_rc (FOXA3_rc); m=23/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.440475; -wwTGTTTACwy--- ; cor=; Ncor= a 0 13048.0 14069.0 1838.0 7272.0 984.0 978.0 1143.0 46586.0 2596.0 19321.0 9298.0 0 0 0 c 0 11103.0 11451.0 614.0 1205.0 934.0 977.0 636.0 690.0 40396.0 9296.0 12744.0 0 0 0 g 0 9884.0 9975.0 933.0 39509.0 973.0 3883.0 1980.0 903.0 1464.0 3627.0 8520.0 0 0 0 t 0 14902.0 13442.0 45552.0 951.0 46046.0 43099.0 45178.0 758.0 4481.0 16693.0 18375.0 0 0 0

MA0042.2_rc_shift3 (FOXI1_rc)
; oligos_6nt_mkv3_m4 versus MA0042.2_rc (FOXI1_rc); m=24/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.435922; ---TGTTTAC----- ; cor=; Ncor= a 0 0 0 0.0 810.0 66.0 0.0 0.0 5175.0 0.0 0 0 0 0 0 c 0 0 0 25.0 48.0 29.0 0.0 37.0 35.0 5175.0 0 0 0 0 0 g 0 0 0 12.0 5175.0 23.0 23.0 540.0 60.0 39.0 0 0 0 0 0 t 0 0 0 5175.0 157.0 5175.0 5175.0 5175.0 74.0 618.0 0 0 0 0 0

MA0481.3_rc_shift1 (FOXP1_rc)
; oligos_6nt_mkv3_m4 versus MA0481.3_rc (FOXP1_rc); m=25/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.43286; -wwTGTTTACwt--- ; cor=; Ncor= a 0 21623.0 21427.0 3609.0 10795.0 2069.0 2585.0 1947.0 71862.0 3111.0 27494.0 17193.0 0 0 0 c 0 12809.0 15846.0 749.0 1493.0 1132.0 1830.0 1073.0 920.0 59571.0 14136.0 16635.0 0 0 0 g 0 14312.0 17235.0 1904.0 61094.0 1487.0 5067.0 2095.0 727.0 1573.0 6209.0 13908.0 0 0 0 t 0 25974.0 20210.0 68456.0 1336.0 70030.0 65236.0 69603.0 1209.0 10463.0 26879.0 26982.0 0 0 0

MA1103.2_rc_shift1 (FOXK2_rc)
; oligos_6nt_mkv3_m4 versus MA1103.2_rc (FOXK2_rc); m=26/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.431878; -ytTGTTTACwt--- ; cor=; Ncor= a 0 3024.0 4016.0 505.0 1472.0 365.0 565.0 341.0 15782.0 694.0 6197.0 3788.0 0 0 0 c 0 5012.0 3950.0 170.0 426.0 391.0 436.0 148.0 327.0 12737.0 3423.0 3471.0 0 0 0 g 0 3788.0 3877.0 295.0 14282.0 330.0 1291.0 277.0 210.0 551.0 2198.0 2872.0 0 0 0 t 0 4855.0 4836.0 15709.0 499.0 15593.0 14387.0 15913.0 360.0 2697.0 4861.0 6548.0 0 0 0

MA0850.1_rc_shift3 (FOXP3_rc)
; oligos_6nt_mkv3_m4 versus MA0850.1_rc (FOXP3_rc); m=27/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.427139; ---TGTTTAy----- ; cor=; Ncor= a 0 0 0 0.0 39.0 0.0 8.0 31.0 211.0 0.0 0 0 0 0 0 c 0 0 0 18.0 32.0 49.0 9.0 0.0 0.0 137.0 0 0 0 0 0 g 0 0 0 0.0 211.0 15.0 0.0 0.0 52.0 0.0 0 0 0 0 0 t 0 0 0 211.0 0.0 211.0 211.0 211.0 20.0 74.0 0 0 0 0 0

MA1606.1_rc_shift1 (Foxf1_rc)
; oligos_6nt_mkv3_m4 versus MA1606.1_rc (Foxf1_rc); m=28/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.418288; -ttTGTTTAywt--- ; cor=; Ncor= a 0 14658.0 13930.0 1916.0 4187.0 831.0 2538.0 903.0 57368.0 3653.0 26418.0 13166.0 0 0 0 c 0 12844.0 14294.0 443.0 522.0 1067.0 811.0 445.0 1158.0 33599.0 8287.0 12462.0 0 0 0 g 0 11715.0 12643.0 745.0 54394.0 475.0 2249.0 899.0 446.0 3754.0 7560.0 10753.0 0 0 0 t 0 20323.0 18673.0 56436.0 437.0 57167.0 53942.0 57293.0 568.0 18534.0 17275.0 23159.0 0 0 0

MA0593.1_rc_shift1 (FOXP2_rc)
; oligos_6nt_mkv3_m4 versus MA0593.1_rc (FOXP2_rc); m=29/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.417694; -tyTGTTTACwt--- ; cor=; Ncor= a 0 126.0 22.0 0.0 9.0 0.0 0.0 0.0 707.0 0.0 277.0 133.0 0 0 0 c 0 184.0 293.0 0.0 0.0 0.0 0.0 0.0 0.0 606.0 142.0 190.0 0 0 0 g 0 124.0 154.0 0.0 757.0 0.0 0.0 0.0 0.0 0.0 7.0 113.0 0 0 0 t 0 332.0 297.0 766.0 0.0 766.0 766.0 766.0 59.0 160.0 340.0 330.0 0 0 0

MA0848.1_rc_shift3 (FOXO4_rc)
; oligos_6nt_mkv3_m4 versus MA0848.1_rc (FOXO4_rc); m=30/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.416778; ---TGTTTAC----- ; cor=; Ncor= a 0 0 0 40.0 958.0 10.0 20.0 20.0 5378.0 0.0 0 0 0 0 0 c 0 0 0 10.0 33.0 90.0 19.0 32.0 123.0 5378.0 0 0 0 0 0 g 0 0 0 10.0 5378.0 0.0 146.0 1259.0 69.0 13.0 0 0 0 0 0 t 0 0 0 5378.0 58.0 5378.0 5378.0 5378.0 345.0 1669.0 0 0 0 0 0

MA0148.4_rc_shift0 (FOXA1_rc)
; oligos_6nt_mkv3_m4 versus MA0148.4_rc (FOXA1_rc); m=31/34; ncol2=12; w=8; offset=-4; strand=R; shift=0; score=0.41565; whATGTTTACwt--- ; cor=; Ncor= a 99726.0 85316.0 230183.0 6999.0 37659.0 3793.0 10719.0 5233.0 291718.0 11970.0 137954.0 70922.0 0 0 0 c 70936.0 94376.0 27283.0 3226.0 4805.0 3652.0 3774.0 5243.0 6092.0 281612.0 53682.0 64510.0 0 0 0 g 64037.0 60571.0 23038.0 3674.0 272943.0 2452.0 13410.0 14648.0 13932.0 5935.0 16071.0 53261.0 0 0 0 t 88104.0 82540.0 42299.0 308904.0 7396.0 312906.0 294900.0 297679.0 11061.0 23286.0 115096.0 134110.0 0 0 0

MA0849.1_rc_shift3 (FOXO6_rc)
; oligos_6nt_mkv3_m4 versus MA0849.1_rc (FOXO6_rc); m=32/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.414193; ---TGTTTAC----- ; cor=; Ncor= a 0 0 0 0.0 385.0 0.0 26.0 0.0 7025.0 0.0 0 0 0 0 0 c 0 0 0 13.0 31.0 0.0 0.0 7.0 32.0 7025.0 0 0 0 0 0 g 0 0 0 0.0 7025.0 0.0 195.0 1147.0 0.0 0.0 0 0 0 0 0 t 0 0 0 7025.0 0.0 7025.0 7025.0 7025.0 154.0 1445.0 0 0 0 0 0

MA0033.2_rc_shift3 (FOXL1_rc)
; oligos_6nt_mkv3_m4 versus MA0033.2_rc (FOXL1_rc); m=33/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.40833; ---TGTTTAy----- ; cor=; Ncor= a 0 0 0 17.0 1057.0 0.0 15.0 0.0 4780.0 140.0 0 0 0 0 0 c 0 0 0 0.0 0.0 50.0 0.0 57.0 0.0 2678.0 0 0 0 0 0 g 0 0 0 54.0 3723.0 82.0 38.0 628.0 416.0 13.0 0 0 0 0 0 t 0 0 0 4780.0 0.0 4780.0 4780.0 4780.0 10.0 2102.0 0 0 0 0 0

MA0031.1_rc_shift2 (FOXD1_rc)
; oligos_6nt_mkv3_m4 versus MA0031.1_rc (FOXD1_rc); m=34/34; ncol2=8; w=6; offset=-2; strand=R; shift=2; score=0.400389; --wTGTTTAC----- ; cor=; Ncor= a 0 0 8.0 0.0 1.0 0.0 0.0 0.0 20.0 1.0 0 0 0 0 0 c 0 0 3.0 0.0 0.0 1.0 0.0 0.0 0.0 17.0 0 0 0 0 0 g 0 0 2.0 0.0 18.0 1.0 0.0 1.0 0.0 1.0 0 0 0 0 0 t 0 0 7.0 20.0 1.0 18.0 20.0 19.0 0.0 1.0 0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_6nt_mkv3_m4_shift4 (oligos_6nt_mkv3_m4)				; oligos_6nt_mkv3_m4; m=0 (reference); ncol1=11; shift=4; ncol=15; ----atTTACATAws ; Alignment reference a 0 0 0 0 460 228 61 32 921 63 1109 80 1031 380 286 c 0 0 0 0 212 227 61 41 41 1038 34 77 47 227 324 g 0 0 0 0 267 182 29 23 187 29 15 56 43 199 301 t 0 0 0 0 257 559 1045 1100 47 66 38 983 75 390 285
MA0785.1_rc_shift3 (POU2F1_rc)				; oligos_6nt_mkv3_m4 versus MA0785.1_rc (POU2F1_rc); m=1/34; ncol2=12; w=11; offset=-1; strand=R; shift=3; score=0.755464; ---aATTwgCATAwt ; cor=; Ncor= a 0 0 0 4262.0 10582.0 158.0 787.0 3651.0 3375.0 1326.0 10582.0 43.0 10582.0 5231.0 2075.0 c 0 0 0 2504.0 755.0 51.0 879.0 46.0 1351.0 10582.0 213.0 29.0 474.0 2142.0 1494.0 g 0 0 0 1840.0 457.0 37.0 108.0 33.0 10582.0 82.0 501.0 12.0 1347.0 1046.0 1938.0 t 0 0 0 1976.0 1422.0 10582.0 10582.0 6932.0 300.0 186.0 153.0 10582.0 756.0 5351.0 5076.0
MA0025.2_rc_shift3 (NFIL3_rc)				; oligos_6nt_mkv3_m4 versus MA0025.2_rc (NFIL3_rc); m=2/34; ncol2=13; w=11; offset=-1; strand=R; shift=3; score=0.730332; ---wtaTTrCATAAy ; cor=; Ncor= a 0 0 0 6893.0 5543.0 13143.0 474.0 434.0 9180.0 610.0 20334.0 433.0 20606.0 20927.0 2798.0 c 0 0 0 4482.0 4152.0 2701.0 360.0 171.0 454.0 20459.0 492.0 990.0 1714.0 518.0 7261.0 g 0 0 0 4929.0 5630.0 4959.0 251.0 543.0 12004.0 467.0 1511.0 220.0 208.0 681.0 3896.0 t 0 0 0 6692.0 7671.0 2193.0 21911.0 21848.0 1358.0 1460.0 659.0 21353.0 468.0 870.0 9041.0
MA0843.1_shift4 (TEF)				; oligos_6nt_mkv3_m4 versus MA0843.1 (TEF); m=3/34; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.715671; ----yrTTACrTAAy ; cor=; Ncor= a 0 0 0 0 541.0 1971.0 90.0 107.0 3601.0 17.0 1324.0 0.0 3601.0 3601.0 0.0 c 0 0 0 0 1053.0 372.0 18.0 0.0 0.0 3601.0 0.0 133.0 76.0 0.0 2120.0 g 0 0 0 0 853.0 1630.0 5.0 31.0 108.0 0.0 2277.0 43.0 11.0 19.0 269.0 t 0 0 0 0 1154.0 8.0 3601.0 3601.0 0.0 446.0 0.0 3601.0 161.0 10.0 1481.0
MA0639.1_shift4 (DBP)				; oligos_6nt_mkv3_m4 versus MA0639.1 (DBP); m=4/34; ncol2=12; w=11; offset=0; strand=D; shift=4; score=0.697828; ----krTTAYRTAAy ; cor=; Ncor= a 0 0 0 0 1552.0 3706.0 5.0 4.0 7100.0 2.0 3180.0 3.0 7100.0 7100.0 158.0 c 0 0 0 0 1714.0 1130.0 4.0 6.0 0.0 7100.0 17.0 541.0 288.0 1.0 3707.0 g 0 0 0 0 1903.0 3393.0 2.0 602.0 498.0 21.0 7100.0 7.0 7.0 2.0 1543.0 t 0 0 0 0 1930.0 93.0 7100.0 7100.0 4.0 2664.0 1.0 7100.0 6.0 2.0 3393.0
MA0627.2_rc_shift2 (POU2F3_rc)				; oligos_6nt_mkv3_m4 versus MA0627.2_rc (POU2F3_rc); m=5/34; ncol2=13; w=11; offset=-2; strand=R; shift=2; score= 0.6907; --wwATTTGCATatw ; cor=; Ncor= a 0 0 17245.0 15909.0 43338.0 330.0 3276.0 896.0 3716.0 2827.0 53366.0 931.0 37593.0 13775.0 16525.0 c 0 0 7941.0 13237.0 4098.0 233.0 804.0 138.0 1079.0 51971.0 1251.0 354.0 3029.0 8770.0 10722.0 g 0 0 11936.0 10595.0 3478.0 164.0 567.0 80.0 50288.0 251.0 322.0 194.0 6885.0 6824.0 11383.0 t 0 0 18907.0 16288.0 5115.0 55302.0 51382.0 54915.0 946.0 980.0 1090.0 54550.0 8522.0 26660.0 17399.0
MA0792.1_rc_shift4 (POU5F1B_rc)				; oligos_6nt_mkv3_m4 versus MA0792.1_rc (POU5F1B_rc); m=6/34; ncol2=9; w=9; offset=0; strand=R; shift=4; score=0.683103; ----ATTwrCATA-- ; cor=; Ncor= a 0 0 0 0 9519.0 203.0 896.0 3220.0 3828.0 1790.0 9519.0 84.0 9519.0 0 0 c 0 0 0 0 750.0 97.0 856.0 65.0 1293.0 9519.0 206.0 67.0 808.0 0 0 g 0 0 0 0 537.0 65.0 144.0 51.0 9519.0 94.0 364.0 21.0 1778.0 0 0 t 0 0 0 0 1559.0 9519.0 9519.0 6299.0 398.0 322.0 171.0 9519.0 1326.0 0 0
MA1115.1_rc_shift3 (POU5F1_rc)				; oligos_6nt_mkv3_m4 versus MA1115.1_rc (POU5F1_rc); m=7/34; ncol2=11; w=10; offset=-1; strand=R; shift=3; score=0.672704; ---haTTTGCATww- ; cor=; Ncor= a 0 0 0 3637.0 6383.0 307.0 838.0 1108.0 1723.0 634.0 12834.0 70.0 4818.0 4846.0 0 c 0 0 0 3551.0 2071.0 257.0 1026.0 118.0 548.0 11571.0 67.0 229.0 1908.0 1996.0 0 g 0 0 0 2450.0 2104.0 270.0 690.0 132.0 10310.0 192.0 130.0 122.0 2785.0 1290.0 0 t 0 0 0 3476.0 2556.0 12280.0 10560.0 11756.0 533.0 717.0 83.0 12693.0 3603.0 4982.0 0
MA0789.1_rc_shift4 (POU3F4_rc)				; oligos_6nt_mkv3_m4 versus MA0789.1_rc (POU3F4_rc); m=8/34; ncol2=9; w=9; offset=0; strand=R; shift=4; score=0.663355; ----ATTwGCATA-- ; cor=; Ncor= a 0 0 0 0 11117.0 168.0 885.0 4670.0 2565.0 245.0 11117.0 26.0 11117.0 0 0 c 0 0 0 0 292.0 88.0 315.0 56.0 602.0 11117.0 24.0 68.0 136.0 0 0 g 0 0 0 0 247.0 47.0 332.0 10.0 11117.0 19.0 59.0 23.0 349.0 0 0 t 0 0 0 0 705.0 11117.0 11117.0 6447.0 136.0 53.0 59.0 11117.0 941.0 0 0
MA1607.1_rc_shift1 (Foxl2_rc)				; oligos_6nt_mkv3_m4 versus MA1607.1_rc (Foxl2_rc); m=9/34; ncol2=14; w=11; offset=-3; strand=R; shift=1; score=0.653163; -ywTGTTTACAtwwy ; cor=; Ncor= a 0 4100.0 4782.0 1270.0 1970.0 328.0 366.0 204.0 16284.0 479.0 12849.0 2785.0 8493.0 5755.0 4214.0 c 0 4529.0 3844.0 401.0 151.0 411.0 187.0 112.0 419.0 14648.0 1371.0 2107.0 1599.0 3521.0 4621.0 g 0 4329.0 4246.0 807.0 15698.0 216.0 336.0 558.0 301.0 367.0 896.0 2051.0 1576.0 2912.0 3031.0 t 0 5143.0 5229.0 15623.0 282.0 17146.0 17212.0 17227.0 1097.0 2607.0 2985.0 11158.0 6433.0 5913.0 6235.0
MA0788.1_rc_shift2 (POU3F3_rc)				; oligos_6nt_mkv3_m4 versus MA0788.1_rc (POU3F3_rc); m=10/34; ncol2=13; w=11; offset=-2; strand=R; shift=2; score=0.652146; --waATTwGCATAww ; cor=; Ncor= a 0 0 542.0 1078.0 1078.0 14.0 79.0 572.0 343.0 86.0 1078.0 30.0 1078.0 637.0 290.0 c 0 0 115.0 237.0 12.0 15.0 77.0 1.0 118.0 1078.0 49.0 12.0 64.0 131.0 137.0 g 0 0 85.0 141.0 20.0 6.0 11.0 4.0 1078.0 10.0 33.0 11.0 57.0 41.0 75.0 t 0 0 536.0 240.0 53.0 1078.0 1078.0 506.0 28.0 22.0 25.0 1078.0 129.0 440.0 576.0
MA0847.2_rc_shift2 (FOXD2_rc)				; oligos_6nt_mkv3_m4 versus MA0847.2_rc (FOXD2_rc); m=11/34; ncol2=13; w=11; offset=-2; strand=R; shift=2; score=0.649893; --wTRTTTAYwTwrs ; cor=; Ncor= a 0 0 2076.0 209.0 2297.0 33.0 11.0 11.0 5995.0 6.0 1553.0 23.0 3812.0 3589.0 442.0 c 0 0 515.0 125.0 0.0 25.0 17.0 11.0 0.0 5995.0 752.0 1294.0 3.0 309.0 2314.0 g 0 0 1003.0 53.0 5995.0 0.0 209.0 658.0 1005.0 101.0 1208.0 92.0 36.0 2406.0 1834.0 t 0 0 2400.0 5995.0 0.0 5995.0 5995.0 5995.0 148.0 2608.0 2482.0 5995.0 2183.0 865.0 1404.0
MA0043.3_rc_shift3 (HLF_rc)				; oligos_6nt_mkv3_m4 versus MA0043.3_rc (HLF_rc); m=12/34; ncol2=14; w=11; offset=-1; strand=R; shift=3; score=0.648231; ---wkrTTRCATAAy ; cor=; Ncor= a 0 0 0 6732.0 5897.0 6488.0 113.0 98.0 6653.0 189.0 22426.0 209.0 23271.0 23739.0 1410.0 c 0 0 0 5523.0 3218.0 3300.0 189.0 48.0 199.0 21705.0 253.0 1344.0 895.0 148.0 9793.0 g 0 0 0 5267.0 6412.0 13237.0 67.0 122.0 17203.0 112.0 1548.0 125.0 96.0 242.0 4432.0 t 0 0 0 6902.0 8897.0 1399.0 24055.0 24156.0 369.0 2418.0 197.0 22746.0 162.0 295.0 8789.0
MA0786.1_rc_shift2 (POU3F1_rc)				; oligos_6nt_mkv3_m4 versus MA0786.1_rc (POU3F1_rc); m=13/34; ncol2=12; w=10; offset=-2; strand=R; shift=2; score=0.635189; --wmATTwrCATAw- ; cor=; Ncor= a 0 0 961.0 1167.0 2471.0 63.0 284.0 1048.0 1119.0 232.0 2471.0 21.0 2471.0 1437.0 0 c 0 0 452.0 620.0 128.0 25.0 130.0 21.0 413.0 2471.0 21.0 26.0 128.0 322.0 0 g 0 0 478.0 302.0 95.0 20.0 103.0 1.0 2471.0 13.0 53.0 7.0 186.0 126.0 0 t 0 0 1510.0 382.0 259.0 2471.0 2471.0 1423.0 170.0 37.0 44.0 2471.0 505.0 1034.0 0
MA0784.1_rc_shift1 (POU1F1_rc)				; oligos_6nt_mkv3_m4 versus MA0784.1_rc (POU1F1_rc); m=14/34; ncol2=14; w=11; offset=-3; strand=R; shift=1; score=0.62186; -cTmATTwGCATAwt ; cor=; Ncor= a 0 547.0 273.0 1287.0 2128.0 3.0 85.0 861.0 536.0 176.0 2128.0 19.0 2128.0 1000.0 397.0 c 0 2128.0 194.0 840.0 40.0 0.0 82.0 7.0 164.0 2128.0 26.0 32.0 108.0 187.0 273.0 g 0 479.0 174.0 241.0 37.0 10.0 11.0 12.0 2128.0 11.0 74.0 14.0 83.0 123.0 247.0 t 0 736.0 2128.0 222.0 76.0 2128.0 2128.0 1267.0 98.0 28.0 45.0 2128.0 276.0 1128.0 1211.0
MA0787.1_rc_shift2 (POU3F2_rc)				; oligos_6nt_mkv3_m4 versus MA0787.1_rc (POU3F2_rc); m=15/34; ncol2=12; w=10; offset=-2; strand=R; shift=2; score=0.617632; --tmATTwGCATAw- ; cor=; Ncor= a 0 0 562.0 840.0 1292.0 13.0 45.0 604.0 372.0 60.0 1292.0 0.0 1292.0 700.0 0 c 0 0 261.0 452.0 28.0 0.0 32.0 1.0 153.0 1292.0 12.0 25.0 40.0 171.0 0 g 0 0 262.0 165.0 19.0 6.0 16.0 4.0 1292.0 9.0 30.0 16.0 65.0 61.0 0 t 0 0 1292.0 137.0 63.0 1292.0 1292.0 688.0 68.0 19.0 28.0 1292.0 163.0 591.0 0
MA0845.1_rc_shift2 (FOXB1_rc)				; oligos_6nt_mkv3_m4 versus MA0845.1_rc (FOXB1_rc); m=16/34; ncol2=11; w=9; offset=-2; strand=R; shift=2; score=0.603075; --aTrTTKACwTw-- ; cor=; Ncor= a 0 0 4008.0 147.0 4589.0 216.0 381.0 73.0 6841.0 124.0 4858.0 561.0 4448.0 0 0 c 0 0 556.0 157.0 104.0 47.0 0.0 75.0 113.0 6841.0 409.0 1498.0 190.0 0 0 g 0 0 573.0 0.0 2252.0 47.0 213.0 1950.0 240.0 54.0 218.0 263.0 272.0 0 0 t 0 0 1704.0 6841.0 28.0 6841.0 6841.0 4891.0 180.0 1159.0 1983.0 5343.0 2393.0 0 0
MA0032.2_rc_shift2 (FOXC1_rc)				; oligos_6nt_mkv3_m4 versus MA0032.2_rc (FOXC1_rc); m=17/34; ncol2=11; w=9; offset=-2; strand=R; shift=2; score=0.572848; --wTrTTKAYwTw-- ; cor=; Ncor= a 0 0 11787.0 184.0 9708.0 112.0 57.0 45.0 18489.0 51.0 10596.0 1386.0 12038.0 0 0 c 0 0 1107.0 433.0 165.0 141.0 0.0 21.0 390.0 13631.0 2422.0 4165.0 304.0 0 0 g 0 0 1558.0 27.0 8782.0 56.0 108.0 5372.0 1652.0 336.0 2008.0 728.0 772.0 0 0 t 0 0 6702.0 18489.0 122.0 18489.0 18489.0 13117.0 2496.0 4858.0 7893.0 14324.0 6452.0 0 0
MA0507.1_shift1 (POU2F2)				; oligos_6nt_mkv3_m4 versus MA0507.1 (POU2F2); m=18/34; ncol2=13; w=10; offset=-3; strand=D; shift=1; score=0.56635; -ykmATTTGCATrw- ; cor=; Ncor= a 0 415.0 530.0 605.0 2016.0 0.0 256.0 0.0 158.0 0.0 2257.0 0.0 1159.0 594.0 0 c 0 635.0 266.0 825.0 19.0 0.0 2.0 0.0 0.0 2271.0 30.0 2.0 39.0 361.0 0 g 0 402.0 593.0 415.0 1.0 0.0 0.0 0.0 1997.0 0.0 0.0 0.0 613.0 107.0 0 t 0 835.0 898.0 442.0 251.0 2287.0 2029.0 2287.0 132.0 16.0 0.0 2285.0 476.0 1225.0 0
MA0142.1_rc_shift4 (Pou5f1::Sox2_rc)				; oligos_6nt_mkv3_m4 versus MA0142.1_rc (Pou5f1::Sox2_rc); m=19/34; ncol2=15; w=11; offset=0; strand=R; shift=4; score=0.563336; ----aTtTGCATrws ; cor=; Ncor= a 0 0 0 0 837.0 53.0 92.0 269.0 196.0 104.0 1332.0 80.0 612.0 907.0 63.0 c 0 0 0 0 207.0 75.0 315.0 30.0 129.0 1239.0 15.0 24.0 186.0 29.0 825.0 g 0 0 0 0 119.0 33.0 68.0 16.0 1029.0 16.0 5.0 30.0 365.0 18.0 363.0 t 0 0 0 0 198.0 1200.0 887.0 1050.0 14.0 10.0 17.0 1235.0 206.0 415.0 118.0
MA0846.1_rc_shift1 (FOXC2_rc)				; oligos_6nt_mkv3_m4 versus MA0846.1_rc (FOXC2_rc); m=20/34; ncol2=12; w=9; offset=-3; strand=R; shift=1; score=0.491498; -wwTRTTTAywTw-- ; cor=; Ncor= a 0 9461.0 7160.0 215.0 6021.0 242.0 107.0 122.0 20456.0 136.0 9155.0 2080.0 11517.0 0 0 c 0 2649.0 1710.0 328.0 68.0 279.0 81.0 87.0 321.0 14038.0 3129.0 5093.0 454.0 0 0 g 0 3080.0 2087.0 101.0 14435.0 105.0 344.0 6759.0 3773.0 440.0 3476.0 1652.0 1279.0 0 0 t 0 10995.0 13296.0 20456.0 31.0 20456.0 20456.0 20456.0 2005.0 6418.0 11301.0 20456.0 8939.0 0 0
MA0607.1_rc_shift8 (Bhlha15_rc)				; oligos_6nt_mkv3_m4 versus MA0607.1_rc (Bhlha15_rc); m=21/34; ncol2=8; w=7; offset=4; strand=R; shift=8; score=0.462462; --------aCATATG ; cor=; Ncor= a 0 0 0 0 0 0 0 0 614.0 0.0 999.0 0.0 799.0 0.0 0.0 c 0 0 0 0 0 0 0 0 154.0 999.0 0.0 0.0 200.0 0.0 0.0 g 0 0 0 0 0 0 0 0 231.0 0.0 0.0 200.0 0.0 0.0 999.0 t 0 0 0 0 0 0 0 0 1.0 0.0 0.0 799.0 0.0 999.0 0.0
MA0047.3_rc_shift1 (FOXA2_rc)				; oligos_6nt_mkv3_m4 versus MA0047.3_rc (FOXA2_rc); m=22/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.459346; -wwTGTTTACwt--- ; cor=; Ncor= a 0 66478.0 84100.0 9418.0 59170.0 7805.0 10179.0 6283.0 254489.0 4144.0 117443.0 52026.0 0 0 0 c 0 56632.0 50527.0 2984.0 3603.0 2805.0 6484.0 2641.0 1890.0 236311.0 38538.0 63806.0 0 0 0 g 0 53633.0 50576.0 3086.0 196969.0 3329.0 22429.0 9424.0 2037.0 2928.0 12432.0 34080.0 0 0 0 t 0 85410.0 76950.0 246665.0 2411.0 248214.0 223061.0 243805.0 3737.0 18770.0 93740.0 112241.0 0 0 0
MA1683.1_rc_shift1 (FOXA3_rc)				; oligos_6nt_mkv3_m4 versus MA1683.1_rc (FOXA3_rc); m=23/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.440475; -wwTGTTTACwy--- ; cor=; Ncor= a 0 13048.0 14069.0 1838.0 7272.0 984.0 978.0 1143.0 46586.0 2596.0 19321.0 9298.0 0 0 0 c 0 11103.0 11451.0 614.0 1205.0 934.0 977.0 636.0 690.0 40396.0 9296.0 12744.0 0 0 0 g 0 9884.0 9975.0 933.0 39509.0 973.0 3883.0 1980.0 903.0 1464.0 3627.0 8520.0 0 0 0 t 0 14902.0 13442.0 45552.0 951.0 46046.0 43099.0 45178.0 758.0 4481.0 16693.0 18375.0 0 0 0
MA0042.2_rc_shift3 (FOXI1_rc)				; oligos_6nt_mkv3_m4 versus MA0042.2_rc (FOXI1_rc); m=24/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.435922; ---TGTTTAC----- ; cor=; Ncor= a 0 0 0 0.0 810.0 66.0 0.0 0.0 5175.0 0.0 0 0 0 0 0 c 0 0 0 25.0 48.0 29.0 0.0 37.0 35.0 5175.0 0 0 0 0 0 g 0 0 0 12.0 5175.0 23.0 23.0 540.0 60.0 39.0 0 0 0 0 0 t 0 0 0 5175.0 157.0 5175.0 5175.0 5175.0 74.0 618.0 0 0 0 0 0
MA0481.3_rc_shift1 (FOXP1_rc)				; oligos_6nt_mkv3_m4 versus MA0481.3_rc (FOXP1_rc); m=25/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.43286; -wwTGTTTACwt--- ; cor=; Ncor= a 0 21623.0 21427.0 3609.0 10795.0 2069.0 2585.0 1947.0 71862.0 3111.0 27494.0 17193.0 0 0 0 c 0 12809.0 15846.0 749.0 1493.0 1132.0 1830.0 1073.0 920.0 59571.0 14136.0 16635.0 0 0 0 g 0 14312.0 17235.0 1904.0 61094.0 1487.0 5067.0 2095.0 727.0 1573.0 6209.0 13908.0 0 0 0 t 0 25974.0 20210.0 68456.0 1336.0 70030.0 65236.0 69603.0 1209.0 10463.0 26879.0 26982.0 0 0 0
MA1103.2_rc_shift1 (FOXK2_rc)				; oligos_6nt_mkv3_m4 versus MA1103.2_rc (FOXK2_rc); m=26/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.431878; -ytTGTTTACwt--- ; cor=; Ncor= a 0 3024.0 4016.0 505.0 1472.0 365.0 565.0 341.0 15782.0 694.0 6197.0 3788.0 0 0 0 c 0 5012.0 3950.0 170.0 426.0 391.0 436.0 148.0 327.0 12737.0 3423.0 3471.0 0 0 0 g 0 3788.0 3877.0 295.0 14282.0 330.0 1291.0 277.0 210.0 551.0 2198.0 2872.0 0 0 0 t 0 4855.0 4836.0 15709.0 499.0 15593.0 14387.0 15913.0 360.0 2697.0 4861.0 6548.0 0 0 0
MA0850.1_rc_shift3 (FOXP3_rc)				; oligos_6nt_mkv3_m4 versus MA0850.1_rc (FOXP3_rc); m=27/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.427139; ---TGTTTAy----- ; cor=; Ncor= a 0 0 0 0.0 39.0 0.0 8.0 31.0 211.0 0.0 0 0 0 0 0 c 0 0 0 18.0 32.0 49.0 9.0 0.0 0.0 137.0 0 0 0 0 0 g 0 0 0 0.0 211.0 15.0 0.0 0.0 52.0 0.0 0 0 0 0 0 t 0 0 0 211.0 0.0 211.0 211.0 211.0 20.0 74.0 0 0 0 0 0
MA1606.1_rc_shift1 (Foxf1_rc)				; oligos_6nt_mkv3_m4 versus MA1606.1_rc (Foxf1_rc); m=28/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.418288; -ttTGTTTAywt--- ; cor=; Ncor= a 0 14658.0 13930.0 1916.0 4187.0 831.0 2538.0 903.0 57368.0 3653.0 26418.0 13166.0 0 0 0 c 0 12844.0 14294.0 443.0 522.0 1067.0 811.0 445.0 1158.0 33599.0 8287.0 12462.0 0 0 0 g 0 11715.0 12643.0 745.0 54394.0 475.0 2249.0 899.0 446.0 3754.0 7560.0 10753.0 0 0 0 t 0 20323.0 18673.0 56436.0 437.0 57167.0 53942.0 57293.0 568.0 18534.0 17275.0 23159.0 0 0 0
MA0593.1_rc_shift1 (FOXP2_rc)				; oligos_6nt_mkv3_m4 versus MA0593.1_rc (FOXP2_rc); m=29/34; ncol2=11; w=8; offset=-3; strand=R; shift=1; score=0.417694; -tyTGTTTACwt--- ; cor=; Ncor= a 0 126.0 22.0 0.0 9.0 0.0 0.0 0.0 707.0 0.0 277.0 133.0 0 0 0 c 0 184.0 293.0 0.0 0.0 0.0 0.0 0.0 0.0 606.0 142.0 190.0 0 0 0 g 0 124.0 154.0 0.0 757.0 0.0 0.0 0.0 0.0 0.0 7.0 113.0 0 0 0 t 0 332.0 297.0 766.0 0.0 766.0 766.0 766.0 59.0 160.0 340.0 330.0 0 0 0
MA0848.1_rc_shift3 (FOXO4_rc)				; oligos_6nt_mkv3_m4 versus MA0848.1_rc (FOXO4_rc); m=30/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.416778; ---TGTTTAC----- ; cor=; Ncor= a 0 0 0 40.0 958.0 10.0 20.0 20.0 5378.0 0.0 0 0 0 0 0 c 0 0 0 10.0 33.0 90.0 19.0 32.0 123.0 5378.0 0 0 0 0 0 g 0 0 0 10.0 5378.0 0.0 146.0 1259.0 69.0 13.0 0 0 0 0 0 t 0 0 0 5378.0 58.0 5378.0 5378.0 5378.0 345.0 1669.0 0 0 0 0 0
MA0148.4_rc_shift0 (FOXA1_rc)				; oligos_6nt_mkv3_m4 versus MA0148.4_rc (FOXA1_rc); m=31/34; ncol2=12; w=8; offset=-4; strand=R; shift=0; score=0.41565; whATGTTTACwt--- ; cor=; Ncor= a 99726.0 85316.0 230183.0 6999.0 37659.0 3793.0 10719.0 5233.0 291718.0 11970.0 137954.0 70922.0 0 0 0 c 70936.0 94376.0 27283.0 3226.0 4805.0 3652.0 3774.0 5243.0 6092.0 281612.0 53682.0 64510.0 0 0 0 g 64037.0 60571.0 23038.0 3674.0 272943.0 2452.0 13410.0 14648.0 13932.0 5935.0 16071.0 53261.0 0 0 0 t 88104.0 82540.0 42299.0 308904.0 7396.0 312906.0 294900.0 297679.0 11061.0 23286.0 115096.0 134110.0 0 0 0
MA0849.1_rc_shift3 (FOXO6_rc)				; oligos_6nt_mkv3_m4 versus MA0849.1_rc (FOXO6_rc); m=32/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.414193; ---TGTTTAC----- ; cor=; Ncor= a 0 0 0 0.0 385.0 0.0 26.0 0.0 7025.0 0.0 0 0 0 0 0 c 0 0 0 13.0 31.0 0.0 0.0 7.0 32.0 7025.0 0 0 0 0 0 g 0 0 0 0.0 7025.0 0.0 195.0 1147.0 0.0 0.0 0 0 0 0 0 t 0 0 0 7025.0 0.0 7025.0 7025.0 7025.0 154.0 1445.0 0 0 0 0 0
MA0033.2_rc_shift3 (FOXL1_rc)				; oligos_6nt_mkv3_m4 versus MA0033.2_rc (FOXL1_rc); m=33/34; ncol2=7; w=6; offset=-1; strand=R; shift=3; score=0.40833; ---TGTTTAy----- ; cor=; Ncor= a 0 0 0 17.0 1057.0 0.0 15.0 0.0 4780.0 140.0 0 0 0 0 0 c 0 0 0 0.0 0.0 50.0 0.0 57.0 0.0 2678.0 0 0 0 0 0 g 0 0 0 54.0 3723.0 82.0 38.0 628.0 416.0 13.0 0 0 0 0 0 t 0 0 0 4780.0 0.0 4780.0 4780.0 4780.0 10.0 2102.0 0 0 0 0 0
MA0031.1_rc_shift2 (FOXD1_rc)				; oligos_6nt_mkv3_m4 versus MA0031.1_rc (FOXD1_rc); m=34/34; ncol2=8; w=6; offset=-2; strand=R; shift=2; score=0.400389; --wTGTTTAC----- ; cor=; Ncor= a 0 0 8.0 0.0 1.0 0.0 0.0 0.0 20.0 1.0 0 0 0 0 0 c 0 0 3.0 0.0 0.0 1.0 0.0 0.0 0.0 17.0 0 0 0 0 0 g 0 0 2.0 0.0 18.0 1.0 0.0 1.0 0.0 1.0 0 0 0 0 0 t 0 0 7.0 20.0 1.0 18.0 20.0 19.0 0.0 1.0 0 0 0 0 0