One-to-n alignments

Command: compare-matrices  -v 1 -mode matches -format1 transfac -file1 $RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/results/discovered_motifs/oligos_7nt_mkv4_m2/peak-motifs_oligos_7nt_mkv4_m2.tf -format2 tf -file2 $RSAT/public_html/motif_databases/JASPAR/Jaspar_2020/nonredundant/JASPAR2020_CORE_vertebrates_non-redundant_pfms.tf -mode matches -strand DR -uth offset_rank 1 -lth w 5 -lth Wr 0.3 -lth cor 0.7 -lth Ncor 0.4 -return matrix_name,matrix_id,cor,Ncor,width,strand,offset,alignments_1ton -sort Ncor -quick -o $RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/results/discovered_motifs/oligos_7nt_mkv4_m2/peak-motifs_oligos_7nt_mkv4_m2_vs_db_jaspar_core_nonredundant_vertebrates

One-to-n matrix alignment; reference matrix: oligos_7nt_mkv4_m2_shift0 ; 14 matrices ; sort_field=Ncor

Matrix name Aligned logos cor Ncor Aligned matrices
oligos_7nt_mkv4_m2_shift0 (oligos_7nt_mkv4_m2)
; oligos_7nt_mkv4_m2; m=0 (reference); ncol1=20; shift=0; ncol=20; yyhcATTTGCATaAcAAwrg ; Alignment reference a 177 143 192 159 530 32 74 97 95 43 731 30 446 536 49 635 665 270 225 181 c 203 197 191 360 74 22 99 18 38 698 10 20 75 34 491 48 24 48 85 183 g 183 171 152 104 75 12 43 8 609 5 4 15 144 19 134 24 38 48 363 294 t 194 246 222 134 78 691 541 634 15 11 12 692 92 168 83 50 30 391 84 99

MA0142.1_rc_shift4 (Pou5f1::Sox2_rc)
; oligos_7nt_mkv4_m2 versus MA0142.1_rc (Pou5f1::Sox2_rc); m=1/13; ncol2=15; w=15; offset=4; strand=R; shift=4; score=0.739242; ----aTtTGCATrwsAAwr- ; cor=; Ncor= a 0 0 0 0 837.0 53.0 92.0 269.0 196.0 104.0 1332.0 80.0 612.0 907.0 63.0 1231.0 1270.0 701.0 389.0 0 c 0 0 0 0 207.0 75.0 315.0 30.0 129.0 1239.0 15.0 24.0 186.0 29.0 825.0 79.0 36.0 28.0 66.0 0 g 0 0 0 0 119.0 33.0 68.0 16.0 1029.0 16.0 5.0 30.0 365.0 18.0 363.0 12.0 50.0 58.0 846.0 0 t 0 0 0 0 198.0 1200.0 887.0 1050.0 14.0 10.0 17.0 1235.0 206.0 415.0 118.0 47.0 11.0 579.0 63.0 0

MA0507.1_shift1 (POU2F2)
; oligos_7nt_mkv4_m2 versus MA0507.1 (POU2F2); m=2/13; ncol2=13; w=13; offset=1; strand=D; shift=1; score=0.617062; -ykmATTTGCATrw------ ; cor=; Ncor= a 0 415.0 530.0 605.0 2016.0 0.0 256.0 0.0 158.0 0.0 2257.0 0.0 1159.0 594.0 0 0 0 0 0 0 c 0 635.0 266.0 825.0 19.0 0.0 2.0 0.0 0.0 2271.0 30.0 2.0 39.0 361.0 0 0 0 0 0 0 g 0 402.0 593.0 415.0 1.0 0.0 0.0 0.0 1997.0 0.0 0.0 0.0 613.0 107.0 0 0 0 0 0 0 t 0 835.0 898.0 442.0 251.0 2287.0 2029.0 2287.0 132.0 16.0 0.0 2285.0 476.0 1225.0 0 0 0 0 0 0

MA0784.1_rc_shift1 (POU1F1_rc)
; oligos_7nt_mkv4_m2 versus MA0784.1_rc (POU1F1_rc); m=3/13; ncol2=14; w=14; offset=1; strand=R; shift=1; score=0.598864; -cTmATTwGCATAwt----- ; cor=; Ncor= a 0 547.0 273.0 1287.0 2128.0 3.0 85.0 861.0 536.0 176.0 2128.0 19.0 2128.0 1000.0 397.0 0 0 0 0 0 c 0 2128.0 194.0 840.0 40.0 0.0 82.0 7.0 164.0 2128.0 26.0 32.0 108.0 187.0 273.0 0 0 0 0 0 g 0 479.0 174.0 241.0 37.0 10.0 11.0 12.0 2128.0 11.0 74.0 14.0 83.0 123.0 247.0 0 0 0 0 0 t 0 736.0 2128.0 222.0 76.0 2128.0 2128.0 1267.0 98.0 28.0 45.0 2128.0 276.0 1128.0 1211.0 0 0 0 0 0

MA0627.2_rc_shift2 (POU2F3_rc)
; oligos_7nt_mkv4_m2 versus MA0627.2_rc (POU2F3_rc); m=4/13; ncol2=13; w=13; offset=2; strand=R; shift=2; score=0.596426; --wwATTTGCATatw----- ; cor=; Ncor= a 0 0 17245.0 15909.0 43338.0 330.0 3276.0 896.0 3716.0 2827.0 53366.0 931.0 37593.0 13775.0 16525.0 0 0 0 0 0 c 0 0 7941.0 13237.0 4098.0 233.0 804.0 138.0 1079.0 51971.0 1251.0 354.0 3029.0 8770.0 10722.0 0 0 0 0 0 g 0 0 11936.0 10595.0 3478.0 164.0 567.0 80.0 50288.0 251.0 322.0 194.0 6885.0 6824.0 11383.0 0 0 0 0 0 t 0 0 18907.0 16288.0 5115.0 55302.0 51382.0 54915.0 946.0 980.0 1090.0 54550.0 8522.0 26660.0 17399.0 0 0 0 0 0

MA0786.1_rc_shift2 (POU3F1_rc)
; oligos_7nt_mkv4_m2 versus MA0786.1_rc (POU3F1_rc); m=5/13; ncol2=12; w=12; offset=2; strand=R; shift=2; score=0.56263; --wmATTwrCATAw------ ; cor=; Ncor= a 0 0 961.0 1167.0 2471.0 63.0 284.0 1048.0 1119.0 232.0 2471.0 21.0 2471.0 1437.0 0 0 0 0 0 0 c 0 0 452.0 620.0 128.0 25.0 130.0 21.0 413.0 2471.0 21.0 26.0 128.0 322.0 0 0 0 0 0 0 g 0 0 478.0 302.0 95.0 20.0 103.0 1.0 2471.0 13.0 53.0 7.0 186.0 126.0 0 0 0 0 0 0 t 0 0 1510.0 382.0 259.0 2471.0 2471.0 1423.0 170.0 37.0 44.0 2471.0 505.0 1034.0 0 0 0 0 0 0

MA0788.1_rc_shift2 (POU3F3_rc)
; oligos_7nt_mkv4_m2 versus MA0788.1_rc (POU3F3_rc); m=6/13; ncol2=13; w=13; offset=2; strand=R; shift=2; score=0.554058; --waATTwGCATAww----- ; cor=; Ncor= a 0 0 542.0 1078.0 1078.0 14.0 79.0 572.0 343.0 86.0 1078.0 30.0 1078.0 637.0 290.0 0 0 0 0 0 c 0 0 115.0 237.0 12.0 15.0 77.0 1.0 118.0 1078.0 49.0 12.0 64.0 131.0 137.0 0 0 0 0 0 g 0 0 85.0 141.0 20.0 6.0 11.0 4.0 1078.0 10.0 33.0 11.0 57.0 41.0 75.0 0 0 0 0 0 t 0 0 536.0 240.0 53.0 1078.0 1078.0 506.0 28.0 22.0 25.0 1078.0 129.0 440.0 576.0 0 0 0 0 0

MA0787.1_rc_shift2 (POU3F2_rc)
; oligos_7nt_mkv4_m2 versus MA0787.1_rc (POU3F2_rc); m=7/13; ncol2=12; w=12; offset=2; strand=R; shift=2; score=0.553028; --tmATTwGCATAw------ ; cor=; Ncor= a 0 0 562.0 840.0 1292.0 13.0 45.0 604.0 372.0 60.0 1292.0 0.0 1292.0 700.0 0 0 0 0 0 0 c 0 0 261.0 452.0 28.0 0.0 32.0 1.0 153.0 1292.0 12.0 25.0 40.0 171.0 0 0 0 0 0 0 g 0 0 262.0 165.0 19.0 6.0 16.0 4.0 1292.0 9.0 30.0 16.0 65.0 61.0 0 0 0 0 0 0 t 0 0 1292.0 137.0 63.0 1292.0 1292.0 688.0 68.0 19.0 28.0 1292.0 163.0 591.0 0 0 0 0 0 0

MA0785.1_rc_shift3 (POU2F1_rc)
; oligos_7nt_mkv4_m2 versus MA0785.1_rc (POU2F1_rc); m=8/13; ncol2=12; w=12; offset=3; strand=R; shift=3; score=0.542221; ---aATTwgCATAwt----- ; cor=; Ncor= a 0 0 0 4262.0 10582.0 158.0 787.0 3651.0 3375.0 1326.0 10582.0 43.0 10582.0 5231.0 2075.0 0 0 0 0 0 c 0 0 0 2504.0 755.0 51.0 879.0 46.0 1351.0 10582.0 213.0 29.0 474.0 2142.0 1494.0 0 0 0 0 0 g 0 0 0 1840.0 457.0 37.0 108.0 33.0 10582.0 82.0 501.0 12.0 1347.0 1046.0 1938.0 0 0 0 0 0 t 0 0 0 1976.0 1422.0 10582.0 10582.0 6932.0 300.0 186.0 153.0 10582.0 756.0 5351.0 5076.0 0 0 0 0 0

MA1115.1_rc_shift3 (POU5F1_rc)
; oligos_7nt_mkv4_m2 versus MA1115.1_rc (POU5F1_rc); m=9/13; ncol2=11; w=11; offset=3; strand=R; shift=3; score=0.526103; ---haTTTGCATww------ ; cor=; Ncor= a 0 0 0 3637.0 6383.0 307.0 838.0 1108.0 1723.0 634.0 12834.0 70.0 4818.0 4846.0 0 0 0 0 0 0 c 0 0 0 3551.0 2071.0 257.0 1026.0 118.0 548.0 11571.0 67.0 229.0 1908.0 1996.0 0 0 0 0 0 0 g 0 0 0 2450.0 2104.0 270.0 690.0 132.0 10310.0 192.0 130.0 122.0 2785.0 1290.0 0 0 0 0 0 0 t 0 0 0 3476.0 2556.0 12280.0 10560.0 11756.0 533.0 717.0 83.0 12693.0 3603.0 4982.0 0 0 0 0 0 0

MA0043.3_rc_shift3 (HLF_rc)
; oligos_7nt_mkv4_m2 versus MA0043.3_rc (HLF_rc); m=10/13; ncol2=14; w=14; offset=3; strand=R; shift=3; score=0.512222; ---wkrTTRCATAAyhw--- ; cor=; Ncor= a 0 0 0 6732.0 5897.0 6488.0 113.0 98.0 6653.0 189.0 22426.0 209.0 23271.0 23739.0 1410.0 7927.0 6925.0 0 0 0 c 0 0 0 5523.0 3218.0 3300.0 189.0 48.0 199.0 21705.0 253.0 1344.0 895.0 148.0 9793.0 6297.0 5626.0 0 0 0 g 0 0 0 5267.0 6412.0 13237.0 67.0 122.0 17203.0 112.0 1548.0 125.0 96.0 242.0 4432.0 4009.0 5063.0 0 0 0 t 0 0 0 6902.0 8897.0 1399.0 24055.0 24156.0 369.0 2418.0 197.0 22746.0 162.0 295.0 8789.0 6191.0 6810.0 0 0 0

MA0025.2_rc_shift3 (NFIL3_rc)
; oligos_7nt_mkv4_m2 versus MA0025.2_rc (NFIL3_rc); m=11/13; ncol2=13; w=13; offset=3; strand=R; shift=3; score=0.486003; ---wtaTTrCATAAyw---- ; cor=; Ncor= a 0 0 0 6893.0 5543.0 13143.0 474.0 434.0 9180.0 610.0 20334.0 433.0 20606.0 20927.0 2798.0 7109.0 0 0 0 0 c 0 0 0 4482.0 4152.0 2701.0 360.0 171.0 454.0 20459.0 492.0 990.0 1714.0 518.0 7261.0 5615.0 0 0 0 0 g 0 0 0 4929.0 5630.0 4959.0 251.0 543.0 12004.0 467.0 1511.0 220.0 208.0 681.0 3896.0 3904.0 0 0 0 0 t 0 0 0 6692.0 7671.0 2193.0 21911.0 21848.0 1358.0 1460.0 659.0 21353.0 468.0 870.0 9041.0 6368.0 0 0 0 0

MA0792.1_rc_shift4 (POU5F1B_rc)
; oligos_7nt_mkv4_m2 versus MA0792.1_rc (POU5F1B_rc); m=12/13; ncol2=9; w=9; offset=4; strand=R; shift=4; score=0.438542; ----ATTwrCATA------- ; cor=; Ncor= a 0 0 0 0 9519.0 203.0 896.0 3220.0 3828.0 1790.0 9519.0 84.0 9519.0 0 0 0 0 0 0 0 c 0 0 0 0 750.0 97.0 856.0 65.0 1293.0 9519.0 206.0 67.0 808.0 0 0 0 0 0 0 0 g 0 0 0 0 537.0 65.0 144.0 51.0 9519.0 94.0 364.0 21.0 1778.0 0 0 0 0 0 0 0 t 0 0 0 0 1559.0 9519.0 9519.0 6299.0 398.0 322.0 171.0 9519.0 1326.0 0 0 0 0 0 0 0

MA0789.1_rc_shift4 (POU3F4_rc)
; oligos_7nt_mkv4_m2 versus MA0789.1_rc (POU3F4_rc); m=13/13; ncol2=9; w=9; offset=4; strand=R; shift=4; score=0.433647; ----ATTwGCATA------- ; cor=; Ncor= a 0 0 0 0 11117.0 168.0 885.0 4670.0 2565.0 245.0 11117.0 26.0 11117.0 0 0 0 0 0 0 0 c 0 0 0 0 292.0 88.0 315.0 56.0 602.0 11117.0 24.0 68.0 136.0 0 0 0 0 0 0 0 g 0 0 0 0 247.0 47.0 332.0 10.0 11117.0 19.0 59.0 23.0 349.0 0 0 0 0 0 0 0 t 0 0 0 0 705.0 11117.0 11117.0 6447.0 136.0 53.0 59.0 11117.0 941.0 0 0 0 0 0 0 0

Matrix name	Aligned logos	cor	Ncor	Aligned matrices
oligos_7nt_mkv4_m2_shift0 (oligos_7nt_mkv4_m2)				; oligos_7nt_mkv4_m2; m=0 (reference); ncol1=20; shift=0; ncol=20; yyhcATTTGCATaAcAAwrg ; Alignment reference a 177 143 192 159 530 32 74 97 95 43 731 30 446 536 49 635 665 270 225 181 c 203 197 191 360 74 22 99 18 38 698 10 20 75 34 491 48 24 48 85 183 g 183 171 152 104 75 12 43 8 609 5 4 15 144 19 134 24 38 48 363 294 t 194 246 222 134 78 691 541 634 15 11 12 692 92 168 83 50 30 391 84 99
MA0142.1_rc_shift4 (Pou5f1::Sox2_rc)				; oligos_7nt_mkv4_m2 versus MA0142.1_rc (Pou5f1::Sox2_rc); m=1/13; ncol2=15; w=15; offset=4; strand=R; shift=4; score=0.739242; ----aTtTGCATrwsAAwr- ; cor=; Ncor= a 0 0 0 0 837.0 53.0 92.0 269.0 196.0 104.0 1332.0 80.0 612.0 907.0 63.0 1231.0 1270.0 701.0 389.0 0 c 0 0 0 0 207.0 75.0 315.0 30.0 129.0 1239.0 15.0 24.0 186.0 29.0 825.0 79.0 36.0 28.0 66.0 0 g 0 0 0 0 119.0 33.0 68.0 16.0 1029.0 16.0 5.0 30.0 365.0 18.0 363.0 12.0 50.0 58.0 846.0 0 t 0 0 0 0 198.0 1200.0 887.0 1050.0 14.0 10.0 17.0 1235.0 206.0 415.0 118.0 47.0 11.0 579.0 63.0 0
MA0507.1_shift1 (POU2F2)				; oligos_7nt_mkv4_m2 versus MA0507.1 (POU2F2); m=2/13; ncol2=13; w=13; offset=1; strand=D; shift=1; score=0.617062; -ykmATTTGCATrw------ ; cor=; Ncor= a 0 415.0 530.0 605.0 2016.0 0.0 256.0 0.0 158.0 0.0 2257.0 0.0 1159.0 594.0 0 0 0 0 0 0 c 0 635.0 266.0 825.0 19.0 0.0 2.0 0.0 0.0 2271.0 30.0 2.0 39.0 361.0 0 0 0 0 0 0 g 0 402.0 593.0 415.0 1.0 0.0 0.0 0.0 1997.0 0.0 0.0 0.0 613.0 107.0 0 0 0 0 0 0 t 0 835.0 898.0 442.0 251.0 2287.0 2029.0 2287.0 132.0 16.0 0.0 2285.0 476.0 1225.0 0 0 0 0 0 0
MA0784.1_rc_shift1 (POU1F1_rc)				; oligos_7nt_mkv4_m2 versus MA0784.1_rc (POU1F1_rc); m=3/13; ncol2=14; w=14; offset=1; strand=R; shift=1; score=0.598864; -cTmATTwGCATAwt----- ; cor=; Ncor= a 0 547.0 273.0 1287.0 2128.0 3.0 85.0 861.0 536.0 176.0 2128.0 19.0 2128.0 1000.0 397.0 0 0 0 0 0 c 0 2128.0 194.0 840.0 40.0 0.0 82.0 7.0 164.0 2128.0 26.0 32.0 108.0 187.0 273.0 0 0 0 0 0 g 0 479.0 174.0 241.0 37.0 10.0 11.0 12.0 2128.0 11.0 74.0 14.0 83.0 123.0 247.0 0 0 0 0 0 t 0 736.0 2128.0 222.0 76.0 2128.0 2128.0 1267.0 98.0 28.0 45.0 2128.0 276.0 1128.0 1211.0 0 0 0 0 0
MA0627.2_rc_shift2 (POU2F3_rc)				; oligos_7nt_mkv4_m2 versus MA0627.2_rc (POU2F3_rc); m=4/13; ncol2=13; w=13; offset=2; strand=R; shift=2; score=0.596426; --wwATTTGCATatw----- ; cor=; Ncor= a 0 0 17245.0 15909.0 43338.0 330.0 3276.0 896.0 3716.0 2827.0 53366.0 931.0 37593.0 13775.0 16525.0 0 0 0 0 0 c 0 0 7941.0 13237.0 4098.0 233.0 804.0 138.0 1079.0 51971.0 1251.0 354.0 3029.0 8770.0 10722.0 0 0 0 0 0 g 0 0 11936.0 10595.0 3478.0 164.0 567.0 80.0 50288.0 251.0 322.0 194.0 6885.0 6824.0 11383.0 0 0 0 0 0 t 0 0 18907.0 16288.0 5115.0 55302.0 51382.0 54915.0 946.0 980.0 1090.0 54550.0 8522.0 26660.0 17399.0 0 0 0 0 0
MA0786.1_rc_shift2 (POU3F1_rc)				; oligos_7nt_mkv4_m2 versus MA0786.1_rc (POU3F1_rc); m=5/13; ncol2=12; w=12; offset=2; strand=R; shift=2; score=0.56263; --wmATTwrCATAw------ ; cor=; Ncor= a 0 0 961.0 1167.0 2471.0 63.0 284.0 1048.0 1119.0 232.0 2471.0 21.0 2471.0 1437.0 0 0 0 0 0 0 c 0 0 452.0 620.0 128.0 25.0 130.0 21.0 413.0 2471.0 21.0 26.0 128.0 322.0 0 0 0 0 0 0 g 0 0 478.0 302.0 95.0 20.0 103.0 1.0 2471.0 13.0 53.0 7.0 186.0 126.0 0 0 0 0 0 0 t 0 0 1510.0 382.0 259.0 2471.0 2471.0 1423.0 170.0 37.0 44.0 2471.0 505.0 1034.0 0 0 0 0 0 0
MA0788.1_rc_shift2 (POU3F3_rc)				; oligos_7nt_mkv4_m2 versus MA0788.1_rc (POU3F3_rc); m=6/13; ncol2=13; w=13; offset=2; strand=R; shift=2; score=0.554058; --waATTwGCATAww----- ; cor=; Ncor= a 0 0 542.0 1078.0 1078.0 14.0 79.0 572.0 343.0 86.0 1078.0 30.0 1078.0 637.0 290.0 0 0 0 0 0 c 0 0 115.0 237.0 12.0 15.0 77.0 1.0 118.0 1078.0 49.0 12.0 64.0 131.0 137.0 0 0 0 0 0 g 0 0 85.0 141.0 20.0 6.0 11.0 4.0 1078.0 10.0 33.0 11.0 57.0 41.0 75.0 0 0 0 0 0 t 0 0 536.0 240.0 53.0 1078.0 1078.0 506.0 28.0 22.0 25.0 1078.0 129.0 440.0 576.0 0 0 0 0 0
MA0787.1_rc_shift2 (POU3F2_rc)				; oligos_7nt_mkv4_m2 versus MA0787.1_rc (POU3F2_rc); m=7/13; ncol2=12; w=12; offset=2; strand=R; shift=2; score=0.553028; --tmATTwGCATAw------ ; cor=; Ncor= a 0 0 562.0 840.0 1292.0 13.0 45.0 604.0 372.0 60.0 1292.0 0.0 1292.0 700.0 0 0 0 0 0 0 c 0 0 261.0 452.0 28.0 0.0 32.0 1.0 153.0 1292.0 12.0 25.0 40.0 171.0 0 0 0 0 0 0 g 0 0 262.0 165.0 19.0 6.0 16.0 4.0 1292.0 9.0 30.0 16.0 65.0 61.0 0 0 0 0 0 0 t 0 0 1292.0 137.0 63.0 1292.0 1292.0 688.0 68.0 19.0 28.0 1292.0 163.0 591.0 0 0 0 0 0 0
MA0785.1_rc_shift3 (POU2F1_rc)				; oligos_7nt_mkv4_m2 versus MA0785.1_rc (POU2F1_rc); m=8/13; ncol2=12; w=12; offset=3; strand=R; shift=3; score=0.542221; ---aATTwgCATAwt----- ; cor=; Ncor= a 0 0 0 4262.0 10582.0 158.0 787.0 3651.0 3375.0 1326.0 10582.0 43.0 10582.0 5231.0 2075.0 0 0 0 0 0 c 0 0 0 2504.0 755.0 51.0 879.0 46.0 1351.0 10582.0 213.0 29.0 474.0 2142.0 1494.0 0 0 0 0 0 g 0 0 0 1840.0 457.0 37.0 108.0 33.0 10582.0 82.0 501.0 12.0 1347.0 1046.0 1938.0 0 0 0 0 0 t 0 0 0 1976.0 1422.0 10582.0 10582.0 6932.0 300.0 186.0 153.0 10582.0 756.0 5351.0 5076.0 0 0 0 0 0
MA1115.1_rc_shift3 (POU5F1_rc)				; oligos_7nt_mkv4_m2 versus MA1115.1_rc (POU5F1_rc); m=9/13; ncol2=11; w=11; offset=3; strand=R; shift=3; score=0.526103; ---haTTTGCATww------ ; cor=; Ncor= a 0 0 0 3637.0 6383.0 307.0 838.0 1108.0 1723.0 634.0 12834.0 70.0 4818.0 4846.0 0 0 0 0 0 0 c 0 0 0 3551.0 2071.0 257.0 1026.0 118.0 548.0 11571.0 67.0 229.0 1908.0 1996.0 0 0 0 0 0 0 g 0 0 0 2450.0 2104.0 270.0 690.0 132.0 10310.0 192.0 130.0 122.0 2785.0 1290.0 0 0 0 0 0 0 t 0 0 0 3476.0 2556.0 12280.0 10560.0 11756.0 533.0 717.0 83.0 12693.0 3603.0 4982.0 0 0 0 0 0 0
MA0043.3_rc_shift3 (HLF_rc)				; oligos_7nt_mkv4_m2 versus MA0043.3_rc (HLF_rc); m=10/13; ncol2=14; w=14; offset=3; strand=R; shift=3; score=0.512222; ---wkrTTRCATAAyhw--- ; cor=; Ncor= a 0 0 0 6732.0 5897.0 6488.0 113.0 98.0 6653.0 189.0 22426.0 209.0 23271.0 23739.0 1410.0 7927.0 6925.0 0 0 0 c 0 0 0 5523.0 3218.0 3300.0 189.0 48.0 199.0 21705.0 253.0 1344.0 895.0 148.0 9793.0 6297.0 5626.0 0 0 0 g 0 0 0 5267.0 6412.0 13237.0 67.0 122.0 17203.0 112.0 1548.0 125.0 96.0 242.0 4432.0 4009.0 5063.0 0 0 0 t 0 0 0 6902.0 8897.0 1399.0 24055.0 24156.0 369.0 2418.0 197.0 22746.0 162.0 295.0 8789.0 6191.0 6810.0 0 0 0
MA0025.2_rc_shift3 (NFIL3_rc)				; oligos_7nt_mkv4_m2 versus MA0025.2_rc (NFIL3_rc); m=11/13; ncol2=13; w=13; offset=3; strand=R; shift=3; score=0.486003; ---wtaTTrCATAAyw---- ; cor=; Ncor= a 0 0 0 6893.0 5543.0 13143.0 474.0 434.0 9180.0 610.0 20334.0 433.0 20606.0 20927.0 2798.0 7109.0 0 0 0 0 c 0 0 0 4482.0 4152.0 2701.0 360.0 171.0 454.0 20459.0 492.0 990.0 1714.0 518.0 7261.0 5615.0 0 0 0 0 g 0 0 0 4929.0 5630.0 4959.0 251.0 543.0 12004.0 467.0 1511.0 220.0 208.0 681.0 3896.0 3904.0 0 0 0 0 t 0 0 0 6692.0 7671.0 2193.0 21911.0 21848.0 1358.0 1460.0 659.0 21353.0 468.0 870.0 9041.0 6368.0 0 0 0 0
MA0792.1_rc_shift4 (POU5F1B_rc)				; oligos_7nt_mkv4_m2 versus MA0792.1_rc (POU5F1B_rc); m=12/13; ncol2=9; w=9; offset=4; strand=R; shift=4; score=0.438542; ----ATTwrCATA------- ; cor=; Ncor= a 0 0 0 0 9519.0 203.0 896.0 3220.0 3828.0 1790.0 9519.0 84.0 9519.0 0 0 0 0 0 0 0 c 0 0 0 0 750.0 97.0 856.0 65.0 1293.0 9519.0 206.0 67.0 808.0 0 0 0 0 0 0 0 g 0 0 0 0 537.0 65.0 144.0 51.0 9519.0 94.0 364.0 21.0 1778.0 0 0 0 0 0 0 0 t 0 0 0 0 1559.0 9519.0 9519.0 6299.0 398.0 322.0 171.0 9519.0 1326.0 0 0 0 0 0 0 0
MA0789.1_rc_shift4 (POU3F4_rc)				; oligos_7nt_mkv4_m2 versus MA0789.1_rc (POU3F4_rc); m=13/13; ncol2=9; w=9; offset=4; strand=R; shift=4; score=0.433647; ----ATTwGCATA------- ; cor=; Ncor= a 0 0 0 0 11117.0 168.0 885.0 4670.0 2565.0 245.0 11117.0 26.0 11117.0 0 0 0 0 0 0 0 c 0 0 0 0 292.0 88.0 315.0 56.0 602.0 11117.0 24.0 68.0 136.0 0 0 0 0 0 0 0 g 0 0 0 0 247.0 47.0 332.0 10.0 11117.0 19.0 59.0 23.0 349.0 0 0 0 0 0 0 0 t 0 0 0 0 705.0 11117.0 11117.0 6447.0 136.0 53.0 59.0 11117.0 941.0 0 0 0 0 0 0 0