/data/rsat/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab 
 position-analysis -v 1 -i $RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/data/sequences/peak-motifs_test_purged_ml40_mis3.fasta -format fasta -sort -return html,chi,sig,distrib,graphs,rank,index -max_graphs 20 -1str -ovlp -seqtype dna -l 2 -ci 20 -img_format png -title Oct4_Chen2008_sites_from_Jaspar -origin center -offset 0 -o $RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Citation: van Helden, et al. (2000).  Nucleic Acids Res 28, 1000-1010.
 Sequence file                	$RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/data/sequences/peak-motifs_test_purged_ml40_mis3.fasta
 Sequence format              	fasta
 Sequence type                	dna
 Output file                  	$RSAT/public_html/tmp/www-data/2021/02/16/peak-motifs.2021-02-16.144431_2021-02-16.144431_tXA9Xd/results/composition/peak-motifs_test_profiles-1str-ovlp_2nt_ci20.tab
 Oligo length                 	2
 Occurrences counted  on a single  strands
 Conditions of applicability checked.
 Background model estimation: homogeneous repartition
 Sequence statistics:
	Nb of sequences              	1000
	Sum of sequence lengths      	409090
	Min sequence length          	0
	Max sequence length          	839
	Average sequence length      	409
	Possible positions           	408090
 Oligonucleotide statistics:
	Total occurrences    	403986
 Position interval parameters:
	Position interval    	20
	Number of windows    	42
	Total positions      	408090
	Degrees of freedom   	41
 K-mer clustering parameters:
	Number of clusters   	0
	Clustering method    	complete
 Position intervals:
	window	[min,max]	mid	seq	occ
	1	-21	[-419,-400]	-409.5	1	20
	2	-20	[-399,-380]	-389.5	3	30
	3	-19	[-379,-360]	-369.5	5	85
	4	-18	[-359,-340]	-349.5	10	150
	5	-17	[-339,-320]	-329.5	24	371
	6	-16	[-319,-300]	-309.5	48	761
	7	-15	[-299,-280]	-289.5	84	1352
	8	-14	[-279,-260]	-269.5	137	2288
	9	-13	[-259,-240]	-249.5	227	3843
	10	-12	[-239,-220]	-229.5	341	5913
	11	-11	[-219,-200]	-209.5	485	8587
	12	-10	[-199,-180]	-189.5	619	11481
	13	-9	[-179,-160]	-169.5	772	14333
	14	-8	[-159,-140]	-149.5	891	17088
	15	-7	[-139,-120]	-129.5	972	19016
	16	-6	[-119,-100]	-109.5	995	19764
	17	-5	[-99,-80]	-89.5	999	19970
	18	-4	[-79,-60]	-69.5	1000	19996
	19	-3	[-59,-40]	-49.5	1000	20000
	20	-2	[-39,-20]	-29.5	1000	20000
	21	-1	[-19,0]	-9.5	1000	20000
	22	0	[1,20]	10.5	1000	20000
	23	1	[21,40]	30.5	1000	20000
	24	2	[41,60]	50.5	1000	20000
	25	3	[61,80]	70.5	1000	19993
	26	4	[81,100]	90.5	999	19964
	27	5	[101,120]	110.5	995	19721
	28	6	[121,140]	130.5	972	18856
	29	7	[141,160]	150.5	891	16845
	30	8	[161,180]	170.5	772	14031
	31	9	[181,200]	190.5	619	11202
	32	10	[201,220]	210.5	485	8293
	33	11	[221,240]	230.5	341	5687
	34	12	[241,260]	250.5	227	3667
	35	13	[261,280]	270.5	137	2181
	36	14	[281,300]	290.5	84	1280
	37	15	[301,320]	310.5	48	714
	38	16	[321,340]	330.5	24	342
	39	17	[341,360]	350.5	10	140
	40	18	[361,380]	370.5	5	82
	41	19	[381,400]	390.5	3	26
	42	20	[401,420]	410.5	1	18

 Column headers
	1	seq            	pattern sequence
	2	id             	pattern identifier
	3	occ            	pattern occurrences
	4	chi2           	observed chi-square
	5	df             	degrees of freedom
	6	Pval           	P-value (probability for one word to be a false positive)
	7	Eval           	E-value; expected number of false positives (Eval = Pval * nb_tests)
	8	sig            	Significance (sig = -log10(Eval))
	9	rank           	rank of the pattern according to sorting criterion
	10	-409.5         	occurrences in window	1	[-419,-400]
	11	-389.5         	occurrences in window	2	[-399,-380]
	12	-369.5         	occurrences in window	3	[-379,-360]
	13	-349.5         	occurrences in window	4	[-359,-340]
	14	-329.5         	occurrences in window	5	[-339,-320]
	15	-309.5         	occurrences in window	6	[-319,-300]
	16	-289.5         	occurrences in window	7	[-299,-280]
	17	-269.5         	occurrences in window	8	[-279,-260]
	18	-249.5         	occurrences in window	9	[-259,-240]
	19	-229.5         	occurrences in window	10	[-239,-220]
	20	-209.5         	occurrences in window	11	[-219,-200]
	21	-189.5         	occurrences in window	12	[-199,-180]
	22	-169.5         	occurrences in window	13	[-179,-160]
	23	-149.5         	occurrences in window	14	[-159,-140]
	24	-129.5         	occurrences in window	15	[-139,-120]
	25	-109.5         	occurrences in window	16	[-119,-100]
	26	-89.5          	occurrences in window	17	[-99,-80]
	27	-69.5          	occurrences in window	18	[-79,-60]
	28	-49.5          	occurrences in window	19	[-59,-40]
	29	-29.5          	occurrences in window	20	[-39,-20]
	30	-9.5           	occurrences in window	21	[-19,0]
	31	10.5           	occurrences in window	22	[1,20]
	32	30.5           	occurrences in window	23	[21,40]
	33	50.5           	occurrences in window	24	[41,60]
	34	70.5           	occurrences in window	25	[61,80]
	35	90.5           	occurrences in window	26	[81,100]
	36	110.5          	occurrences in window	27	[101,120]
	37	130.5          	occurrences in window	28	[121,140]
	38	150.5          	occurrences in window	29	[141,160]
	39	170.5          	occurrences in window	30	[161,180]
	40	190.5          	occurrences in window	31	[181,200]
	41	210.5          	occurrences in window	32	[201,220]
	42	230.5          	occurrences in window	33	[221,240]
	43	250.5          	occurrences in window	34	[241,260]
	44	270.5          	occurrences in window	35	[261,280]
	45	290.5          	occurrences in window	36	[281,300]
	46	310.5          	occurrences in window	37	[301,320]
	47	330.5          	occurrences in window	38	[321,340]
	48	350.5          	occurrences in window	39	[341,360]
	49	370.5          	occurrences in window	40	[361,380]
	50	390.5          	occurrences in window	41	[381,400]
	51	410.5          	occurrences in window	42	[401,420]
seq id occ chi2 df Pval Eval sig rank -409.5 -389.5 -369.5 -349.5 -329.5 -309.5 -289.5 -269.5 -249.5 -229.5 -209.5 -189.5 -169.5 -149.5 -129.5 -109.5 -89.5 -69.5 -49.5 -29.5 -9.5 10.5 30.5 50.5 70.5 90.5 110.5 130.5 150.5 170.5 190.5 210.5 230.5 250.5 270.5 290.5 310.5 330.5 350.5 370.5 390.5 410.5
gc gc 23704 142.7 41 3.6e-13 5.8e-12 11.24 1 0 2 4 10 15 39 60 115 204 345 505 610 734 944 1092 1125 1224 1247 1223 1330 1261 1293 1231 1221 1168 1143 1115 975 899 722 611 478 301 212 112 65 30 25 7 3 2 2
at at 21146 120.9 41 8.2e-10 1.3e-08 7.88 2 0 1 5 6 29 41 87 104 188 301 429 570 712 869 879 958 1062 1066 1126 1188 1142 1143 1086 1028 995 970 909 949 812 730 563 434 341 185 114 69 34 13 4 4 0 0
gg gg 27988 111.7 41 1.8e-08 2.9e-07 6.54 3 0 3 10 14 25 60 98 148 271 403 630 806 1002 1099 1268 1274 1296 1337 1334 1297 1276 1530 1411 1375 1496 1349 1333 1373 1193 1052 801 513 360 253 118 75 60 33 7 1 2 2
aa aa 30765 105.9 41 1.2e-07 1.9e-06 5.72 4 7 0 7 8 28 70 111 194 297 460 691 925 1105 1396 1583 1593 1528 1544 1509 1381 1465 1440 1419 1396 1409 1505 1415 1314 1308 1084 842 621 445 310 154 99 57 19 13 9 2 2
cc cc 27770 90.0 41 1.6e-05 0.00025 3.60 5 0 3 1 13 21 41 77 173 258 416 574 773 936 1204 1322 1429 1401 1454 1312 1247 1360 1322 1320 1476 1389 1391 1368 1301 1076 892 758 569 364 230 126 78 38 21 20 11 3 2
tg tg 30788 88.1 41 2.7e-05 0.00043 3.37 6 0 2 9 14 20 53 99 159 251 443 631 802 979 1221 1338 1446 1542 1502 1562 1671 1584 1607 1611 1568 1459 1462 1465 1371 1278 1065 828 659 457 284 159 96 52 26 7 4 0 2
ca ca 30632 87.7 41 3.0e-05 0.00048 3.31 7 2 3 4 11 30 53 110 165 295 457 686 833 1103 1220 1440 1526 1487 1600 1620 1601 1546 1596 1523 1454 1486 1471 1417 1346 1135 987 834 605 401 240 154 100 45 16 12 13 4 1
tt tt 30435 60.9 41 2.3e-02 0.37 0.43 8 1 5 5 15 34 67 89 155 281 453 602 867 1072 1278 1370 1412 1439 1414 1442 1505 1571 1445 1482 1542 1485 1485 1547 1532 1320 1023 838 591 415 264 165 106 75 27 11 5 0 0
ga ga 25101 45.8 41 2.8e-01 4.5 -0.65 9 1 0 6 6 24 33 87 140 237 343 515 720 896 1065 1184 1266 1250 1196 1201 1163 1168 1210 1244 1232 1226 1173 1181 1178 1105 921 694 537 364 235 157 77 43 14 4 1 3 1
tc tc 24967 45.3 41 3.0e-01 4.7 -0.68 10 1 3 8 11 26 52 80 155 256 368 532 695 880 1125 1190 1244 1179 1237 1190 1200 1240 1110 1212 1203 1264 1221 1233 1185 968 850 688 496 346 200 146 84 40 26 11 9 2 1
ta ta 18192 36.9 41 6.5e-01 10 -1.02 11 2 0 3 4 18 39 72 96 182 249 356 527 690 783 824 827 925 858 886 874 904 876 876 869 855 915 828 861 770 645 502 388 283 172 103 63 40 19 6 2 0 0
ct ct 32015 36.8 41 6.6e-01 11 -1.02 12 2 4 8 13 23 65 79 179 293 453 654 869 1105 1367 1508 1557 1594 1536 1547 1544 1569 1471 1570 1603 1625 1606 1606 1482 1316 1081 858 708 439 275 186 110 54 33 12 6 2 3
gt gt 20855 36.2 41 6.8e-01 11 -1.04 13 0 1 7 8 17 36 84 128 206 318 447 585 738 886 955 998 984 1001 983 1028 983 1007 1019 1016 974 1006 1042 927 927 759 604 408 312 208 106 64 46 24 9 4 0 0
ac ac 20751 35.6 41 7.1e-01 11 -1.05 14 3 2 1 6 18 33 70 114 203 294 425 597 786 829 1008 1035 1023 993 1044 960 958 998 1016 971 1010 1037 997 968 855 742 584 466 290 166 119 71 36 10 5 6 1 1
ag ag 32053 31.0 41 8.7e-01 14 -1.14 15 1 1 5 9 27 50 107 187 313 468 673 944 1189 1374 1566 1601 1603 1592 1527 1509 1505 1547 1549 1547 1570 1549 1527 1432 1352 1109 885 628 420 305 174 100 58 29 12 4 4 1
cg cg 6824 27.5 41 9.5e-01 15 -1.18 16 0 0 2 2 9 9 22 52 72 98 148 176 216 286 336 343 338 333 320 318 354 340 344 355 328 317 332 292 297 226 204 132 87 63 38 21 6 7 0 0 1 0 
 Host name	pedagogix
 Job started	2021-02-16.144452
 Job done	2021-02-16.144502
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